Guide to the Human Genome
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Name: TULP2 Sequence: fasta or formatted (520aa) NCBI GI: 238859545
Description:

tubby like protein 2

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         25           2
 C cysteine            1.5          8           1
 D aspartate           5.8         30           1
 E glutamate           6.9         36           2
 F phenylalanine       4.0         21           1
 G glycine             8.1         42           2
 H histidine           2.9         15           1
 I isoleucine          2.1         11           1
 K lysine              5.0         26           2
 L leucine            11.2         58           4
 M methionine          2.5         13           2
 N asparagine          5.2         27           1
 P proline             6.2         32           3
 Q glutamine           5.2         27           2
 R arginine            8.3         43           3
 S serine              8.1         42           2
 T threonine           4.6         24           1
 V valine              4.6         24           1
 W tryptophan          1.0          5           1
 Y tyrosine            2.1         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubby like protein 2 
TUB                   0.294   tubby isoform b 
TUB                   0.293   tubby isoform a 
TULP1                 0.266   tubby like protein 1 
TULP3                 0.239   tubby like protein 3 isoform 2 
TULP3                 0.239   tubby like protein 3 isoform 1 
TULP4                 0.041   tubby like protein 4 isoform 1 
C6orf174              0.009   hypothetical protein LOC387104 
TULP4                 0.009   tubby like protein 4 isoform 2 
CHD9                  0.009   chromodomain helicase DNA binding protein 9 
KIAA1751              0.008   hypothetical protein LOC85452 
AEBP1                 0.008   adipocyte enhancer binding protein 1 precursor [Homo...
GNL3                  0.007   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.007   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.007   guanine nucleotide binding protein-like 3 isoform 1 ...
KIAA0802              0.007   hypothetical protein LOC23255 
PRPF40B               0.007   Huntingtin interacting protein C isoform 2 
PRPF40B               0.007   Huntingtin interacting protein C isoform 1 
C1orf125              0.007   hypothetical protein LOC126859 isoform 1 
C1orf125              0.007   hypothetical protein LOC126859 isoform 2 
RNF157                0.007   ring finger protein 157 
SCAF1                 0.006   SR-related CTD-associated factor 1 
LOC100289743          0.006   PREDICTED: hypothetical protein XP_002348163 
LOC100294358          0.006   PREDICTED: hypothetical protein 
DACT1                 0.006   dapper 1 isoform 2 
DACT1                 0.006   dapper 1 isoform 1 
PRRG1                 0.006   proline rich Gla (G-carboxyglutamic acid) 1 
PRRG1                 0.006   proline rich Gla (G-carboxyglutamic acid) 1 
SP9                   0.005   Sp9 transcription factor homolog 
HRNR                  0.005   hornerin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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