NPTN 16180

Name: NPTN	Sequence: fasta or formatted (278aa)		NCBI GI: 238624149
Description: neuroplastin isoform d precursor		Referenced in: Notch Pathway
Other entries for this name: alt prot [394aa] neuroplastin isoform c precursor alt prot [398aa] neuroplastin isoform b precursor alt prot [282aa] neuroplastin isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 19 2 C cysteine 1.4 4 1 D aspartate 3.6 10 1 E glutamate 6.8 19 2 F phenylalanine 1.4 4 2 G glycine 5.4 15 1 H histidine 2.5 7 1 I isoleucine 6.8 19 3 K lysine 5.8 16 2 L leucine 7.9 22 3 M methionine 2.2 6 1 N asparagine 8.3 23 2 P proline 6.5 18 1 Q glutamine 1.8 5 1 R arginine 5.0 14 1 S serine 8.6 24 3 T threonine 6.5 18 1 V valine 7.6 21 2 W tryptophan 1.4 4 1 Y tyrosine 3.6 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuroplastin isoform d precursor NPTN 0.989 neuroplastin isoform a precursor NPTN 0.896 neuroplastin isoform c precursor NPTN 0.887 neuroplastin isoform b precursor BSG 0.269 basigin isoform 1 precursor BSG 0.269 basigin isoform 2 precursor BSG 0.241 basigin isoform 4 TTN 0.082 titin isoform N2-A PXDN 0.078 peroxidasin EMB 0.078 embigin NCAM1 0.065 neural cell adhesion molecule 1 isoform 1 NCAM1 0.065 neural cell adhesion molecule 1 isoform 3 LOC100292387 0.059 PREDICTED: similar to hemicentin 2 HMCN2 0.059 PREDICTED: hemicentin 2 LRIG3 0.056 leucine-rich repeats and immunoglobulin-like domains... LRIG3 0.056 leucine-rich repeats and immunoglobulin-like domain... HMCN1 0.056 hemicentin 1 LRIG1 0.056 leucine-rich repeats and immunoglobulin-like domains... PXDNL 0.056 peroxidasin homolog-like ROBO3 0.056 roundabout, axon guidance receptor, homolog 3 LSAMP 0.054 limbic system-associated membrane protein ROBO1 0.054 roundabout 1 isoform b LOC100289200 0.054 PREDICTED: hypothetical protein XP_002342997 ROBO1 0.054 roundabout 1 isoform a IGDCC3 0.054 putative neuronal cell adhesion molecule TTN 0.052 titin isoform novex-2 TTN 0.052 titin isoform novex-1 TTN 0.052 titin isoform N2-B NCAM1 0.052 neural cell adhesion molecule 1 isoform 2 HMCN2 0.050 PREDICTED: hemicentin 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.