NPTN 34978

Name: NPTN	Sequence: fasta or formatted (398aa)		NCBI GI: 6912646
Description: neuroplastin isoform b precursor		Referenced in: Notch Pathway
Other entries for this name: alt prot [394aa] neuroplastin isoform c precursor alt prot [278aa] neuroplastin isoform d precursor alt prot [282aa] neuroplastin isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 28 2 C cysteine 1.5 6 1 D aspartate 4.5 18 3 E glutamate 6.5 26 2 F phenylalanine 1.8 7 2 G glycine 5.5 22 1 H histidine 1.8 7 1 I isoleucine 6.0 24 3 K lysine 5.3 21 2 L leucine 7.5 30 3 M methionine 1.8 7 1 N asparagine 7.3 29 2 P proline 6.0 24 1 Q glutamine 2.5 10 1 R arginine 6.3 25 2 S serine 8.5 34 3 T threonine 7.0 28 1 V valine 7.5 30 2 W tryptophan 2.0 8 2 Y tyrosine 3.5 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuroplastin isoform b precursor NPTN 0.981 neuroplastin isoform c precursor NPTN 0.629 neuroplastin isoform a precursor NPTN 0.610 neuroplastin isoform d precursor BSG 0.351 basigin isoform 1 precursor BSG 0.193 basigin isoform 2 precursor BSG 0.173 basigin isoform 4 TTN 0.082 titin isoform N2-A PXDN 0.079 peroxidasin CNTN5 0.065 contactin 5 isoform long CNTN5 0.065 contactin 5 isoform short HMCN2 0.057 PREDICTED: hemicentin 2 HMCN2 0.057 PREDICTED: hemicentin 2 HMCN2 0.057 PREDICTED: hemicentin 2 HMCN1 0.057 hemicentin 1 DCC 0.056 deleted in colorectal carcinoma EMB 0.056 embigin PXDNL 0.054 peroxidasin homolog-like NCAM1 0.051 neural cell adhesion molecule 1 isoform 1 NCAM1 0.051 neural cell adhesion molecule 1 isoform 3 CNTN4 0.051 contactin 4 isoform a precursor MYLK 0.051 myosin light chain kinase isoform 3A MYLK 0.051 myosin light chain kinase isoform 1 LOC100292387 0.050 PREDICTED: similar to hemicentin 2 DSCAML1 0.050 Down syndrome cell adhesion molecule like 1 ROBO2 0.050 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.050 roundabout, axon guidance receptor, homolog 2 isofor... LOC100289200 0.048 PREDICTED: hypothetical protein XP_002342997 NCAM2 0.048 neural cell adhesion molecule 2 precursor LRIG1 0.047 leucine-rich repeats and immunoglobulin-like domains... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.