RNF170 16123

Name: RNF170	Sequence: fasta or formatted (258aa)		NCBI GI: 237858650
Description: ring finger protein 170 isoform a		Referenced in: Ring Finger Proteins
Other entries for this name: alt mRNA [258aa] ring finger protein 170 isoform a alt prot [200aa] ring finger protein 170 isoform b alt prot [174aa] ring finger protein 170 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 15 2 C cysteine 3.1 8 1 D aspartate 5.8 15 3 E glutamate 4.7 12 1 F phenylalanine 7.4 19 2 G glycine 5.0 13 2 H histidine 2.3 6 1 I isoleucine 8.1 21 2 K lysine 0.8 2 1 L leucine 12.4 32 3 M methionine 3.1 8 1 N asparagine 2.3 6 1 P proline 3.5 9 1 Q glutamine 6.6 17 2 R arginine 7.0 18 2 S serine 5.0 13 1 T threonine 4.3 11 1 V valine 7.8 20 3 W tryptophan 1.2 3 1 Y tyrosine 3.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ring finger protein 170 isoform a RNF170 1.000 ring finger protein 170 isoform a RNF170 0.681 ring finger protein 170 isoform c RNF170 0.502 ring finger protein 170 isoform b TRIM40 0.052 tripartite motif-containing 40 TRIM21 0.044 tripartite motif protein 21 TRIM8 0.044 tripartite motif-containing 8 TRIM39 0.044 tripartite motif-containing 39 isoform 2 TRIM39 0.044 tripartite motif-containing 39 isoform 1 TRIM60 0.044 ring finger protein 129 TRIM47 0.044 tripartite motif-containing 47 TRIM5 0.042 tripartite motif protein TRIM5 isoform alpha TRIM5 0.042 tripartite motif protein TRIM5 isoform delta TRIM5 0.042 tripartite motif protein TRIM5 isoform gamma TRIM4 0.042 tripartite motif protein TRIM4 isoform alpha TRIM4 0.042 tripartite motif protein TRIM4 isoform beta TRIM62 0.042 tripartite motif-containing 62 RNF125 0.042 ring finger protein 125 TRIM22 0.040 tripartite motif-containing 22 TRIM27 0.040 ret finger protein TRIM68 0.040 ring finger protein 137 RAG1 0.040 recombination activating gene 1 TRIM11 0.040 tripartite motif-containing 11 RNF10 0.040 ring finger protein 10 RNF138 0.040 ring finger protein 138 isoform 1 BRCA1 0.038 breast cancer 1, early onset isoform 2 BRCA1 0.038 breast cancer 1, early onset isoform 5 BRCA1 0.038 breast cancer 1, early onset isoform 4 BRCA1 0.038 breast cancer 1, early onset isoform 1 TRIML1 0.038 tripartite motif family-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.