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Search of human proteins with 23503299
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23503299 proline rich 22 isoform 2 [Homo sapiens]
(420 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23503299 proline rich 22 isoform 2 [Homo sapiens] 885 0.0
gi|197245373 proline rich 22 isoform 1 [Homo sapiens] 759 0.0
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 56 5e-08
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 56 5e-08
gi|11386183 WAS protein family, member 2 [Homo sapiens] 56 5e-08
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 56 5e-08
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 56 5e-08
gi|7706501 WW domain binding protein 11 [Homo sapiens] 55 9e-08
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 54 2e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 54 2e-07
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 54 2e-07
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 54 3e-07
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 54 3e-07
gi|153792074 proline rich 12 [Homo sapiens] 53 5e-07
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 52 8e-07
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 52 1e-06
gi|210032580 SET domain containing 1B [Homo sapiens] 52 1e-06
gi|18079216 CASK interacting protein 1 [Homo sapiens] 51 2e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 51 2e-06
gi|194353976 transcription factor AP-2 epsilon (activating enhan... 51 2e-06
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 51 2e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 2e-06
gi|55750053 atrophin-1 [Homo sapiens] 51 2e-06
gi|55750041 atrophin-1 [Homo sapiens] 51 2e-06
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 50 3e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 50 3e-06
gi|148612835 zinc finger protein 207 isoform c [Homo sapiens] 50 3e-06
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 50 4e-06
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 50 4e-06
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 50 4e-06
>gi|23503299 proline rich 22 isoform 2 [Homo sapiens]
Length = 420
Score = 885 bits (2287), Expect = 0.0
Identities = 420/420 (100%), Positives = 420/420 (100%)
Query: 1 MSPKDKLCVIHHPARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLP 60
MSPKDKLCVIHHPARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLP
Sbjct: 1 MSPKDKLCVIHHPARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLP 60
Query: 61 PTGFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYL 120
PTGFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYL
Sbjct: 61 PTGFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYL 120
Query: 121 KAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAP 180
KAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAP
Sbjct: 121 KAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAP 180
Query: 181 LPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPG 240
LPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPG
Sbjct: 181 LPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPG 240
Query: 241 VPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEP 300
VPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEP
Sbjct: 241 VPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEP 300
Query: 301 EGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALD 360
EGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALD
Sbjct: 301 EGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALD 360
Query: 361 EEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGATPH 420
EEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGATPH
Sbjct: 361 EEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGATPH 420
>gi|197245373 proline rich 22 isoform 1 [Homo sapiens]
Length = 422
Score = 759 bits (1959), Expect = 0.0
Identities = 360/361 (99%), Positives = 360/361 (99%)
Query: 60 PPTGFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPY 119
PP GFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPY
Sbjct: 62 PPAGFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPY 121
Query: 120 LKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPA 179
LKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPA
Sbjct: 122 LKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPA 181
Query: 180 PLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARP 239
PLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARP
Sbjct: 182 PLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARP 241
Query: 240 GVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASE 299
GVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASE
Sbjct: 242 GVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASE 301
Query: 300 PEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKAL 359
PEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKAL
Sbjct: 302 PEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKAL 361
Query: 360 DEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGATP 419
DEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGATP
Sbjct: 362 DEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGATP 421
Query: 420 H 420
H
Sbjct: 422 H 422
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 56.2 bits (134), Expect = 5e-08
Identities = 54/172 (31%), Positives = 61/172 (35%), Gaps = 32/172 (18%)
Query: 95 LAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYP------HYQQAPGGPQFLLP----- 143
L SG P APG P P P PP P PGG P
Sbjct: 579 LPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSG 638
Query: 144 --YFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPP----KENKPPPVLIT 197
PP P PE +G + +P PP G A +PPPPP PPP
Sbjct: 639 DATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPP-PP 697
Query: 198 LPAEPTLPPDAYSHLQGHLGHFPG-PEPLAFPVKELQGSGARPGVPLYPPGL 248
LP E +PP G PG P P FP PG+P PPG+
Sbjct: 698 LPGEAGMPPPPPPLPGG-----PGIPPPPPFP--------GGPGIPPPPPGM 736
Score = 44.7 bits (104), Expect = 2e-04
Identities = 56/202 (27%), Positives = 68/202 (33%), Gaps = 65/202 (32%)
Query: 7 LCVIHHPARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLG-PSGSSCSQGTRLPPTGFQ 65
+C+ P+ + PP P +G + P P G+G PS SS GT +PP
Sbjct: 616 VCISSPPSLPGGTAISPPP--PLSGDATIPPPPPLPE-GVGIPSPSSLPGGTAIPPP--- 669
Query: 66 MAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGL 125
P L SA P P PGS + P P
Sbjct: 670 -------------------PPLPGSARI--------PPPPPPLPGSAGIPPPP------- 695
Query: 126 PPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPP 185
PP P P P L P GPG +P PP G +PPPP
Sbjct: 696 PPLPGEAGMPPPPPPL-----PGGPG-----------------IPPPPPFPGGPGIPPPP 733
Query: 186 PKEN--KPPPVLITLPAEPTLP 205
P PPP +PA P LP
Sbjct: 734 PGMGMPPPPPFGFGVPAAPVLP 755
Score = 30.0 bits (66), Expect = 4.1
Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 14/93 (15%)
Query: 169 LPLPPLEEGPAPLPPPPPKENK-----PPPVL---ITLPAEPTLPPDAYSHLQGHL---- 216
+ +PP AP+PP PP PPP T P P PP L G +
Sbjct: 561 ITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISS 620
Query: 217 -GHFPGPEPLAFPVKELQGSGARPGVPLYPPGL 248
PG ++ P L G P P P G+
Sbjct: 621 PPSLPGGTAIS-PPPPLSGDATIPPPPPLPEGV 652
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 56.2 bits (134), Expect = 5e-08
Identities = 54/172 (31%), Positives = 61/172 (35%), Gaps = 32/172 (18%)
Query: 95 LAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYP------HYQQAPGGPQFLLP----- 143
L SG P APG P P P PP P PGG P
Sbjct: 588 LPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSG 647
Query: 144 --YFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPP----KENKPPPVLIT 197
PP P PE +G + +P PP G A +PPPPP PPP
Sbjct: 648 DATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPP-PP 706
Query: 198 LPAEPTLPPDAYSHLQGHLGHFPG-PEPLAFPVKELQGSGARPGVPLYPPGL 248
LP E +PP G PG P P FP PG+P PPG+
Sbjct: 707 LPGEAGMPPPPPPLPGG-----PGIPPPPPFP--------GGPGIPPPPPGM 745
Score = 44.7 bits (104), Expect = 2e-04
Identities = 56/202 (27%), Positives = 68/202 (33%), Gaps = 65/202 (32%)
Query: 7 LCVIHHPARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLG-PSGSSCSQGTRLPPTGFQ 65
+C+ P+ + PP P +G + P P G+G PS SS GT +PP
Sbjct: 625 VCISSPPSLPGGTAISPPP--PLSGDATIPPPPPLPE-GVGIPSPSSLPGGTAIPPP--- 678
Query: 66 MAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGL 125
P L SA P P PGS + P P
Sbjct: 679 -------------------PPLPGSARI--------PPPPPPLPGSAGIPPPP------- 704
Query: 126 PPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPP 185
PP P P P L P GPG +P PP G +PPPP
Sbjct: 705 PPLPGEAGMPPPPPPL-----PGGPG-----------------IPPPPPFPGGPGIPPPP 742
Query: 186 PKEN--KPPPVLITLPAEPTLP 205
P PPP +PA P LP
Sbjct: 743 PGMGMPPPPPFGFGVPAAPVLP 764
Score = 30.0 bits (66), Expect = 4.1
Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 14/93 (15%)
Query: 169 LPLPPLEEGPAPLPPPPPKENK-----PPPVL---ITLPAEPTLPPDAYSHLQGHL---- 216
+ +PP AP+PP PP PPP T P P PP L G +
Sbjct: 570 ITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISS 629
Query: 217 -GHFPGPEPLAFPVKELQGSGARPGVPLYPPGL 248
PG ++ P L G P P P G+
Sbjct: 630 PPSLPGGTAIS-PPPPLSGDATIPPPPPLPEGV 661
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 56.2 bits (134), Expect = 5e-08
Identities = 37/111 (33%), Positives = 43/111 (38%), Gaps = 18/111 (16%)
Query: 102 PAGVPSAPGSYLLEPQPY---LKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFV 158
PA P P + P P +PG PP P P P F P PP P
Sbjct: 320 PAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPA------- 372
Query: 159 GDAGPAAFVELPLPPLEE---GPAPLPPPPPKENKPPPVLITLPAEPTLPP 206
A + LP PPL + G P PPPPP PPP +P +PP
Sbjct: 373 -----ADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPP 418
Score = 39.7 bits (91), Expect = 0.005
Identities = 43/152 (28%), Positives = 50/152 (32%), Gaps = 28/152 (18%)
Query: 116 PQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPG---PEALGFVGDAGPAAFVELPLP 172
P P LPP P +F P G G P+ V + P L P
Sbjct: 258 PSPSFSEDNLPPPP--------AEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSP 309
Query: 173 P-----LEEGPAPLPPPPPK---ENKPPPVLITLPAEPTLP-PDAYSHLQGHLGHFPGPE 223
P PAP PPPPP PPPV P P P P ++ P P
Sbjct: 310 PGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPP 369
Query: 224 PLAF--------PVKELQGSGARPGVPLYPPG 247
P A P+ + G P P PPG
Sbjct: 370 PPAADYPTLPPPPLSQPTGGAPPPPPPPPPPG 401
Score = 38.1 bits (87), Expect = 0.015
Identities = 45/164 (27%), Positives = 50/164 (30%), Gaps = 49/164 (29%)
Query: 17 PKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPR 76
PK PP PP ++ P P +G G S GT PP+ P
Sbjct: 312 PKPGFAPPPAPPPPPPPMIGIPPPPPPVGFG------SPGTPPPPSPPSFPP-------- 357
Query: 77 IYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPG 136
PD A P P P P P LPP P Q G
Sbjct: 358 -------HPDF---------------AAPPPPP------PPPAADYPTLPPPPLSQPTGG 389
Query: 137 GPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAP 180
P P PP PGP F G G A PPL + P
Sbjct: 390 APP---PPPPPPPPGPPPPPFTGADGQPAIP----PPLSDTTKP 426
Score = 28.9 bits (63), Expect = 9.1
Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 331 EELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGP---PATNTPAPILSGKRKAST 387
E + + Y P D+ S+ F+ ++ PP P P N L+G +++S
Sbjct: 239 ENVDASSYPPPPQSDSASSPSPSFS----EDNLPPPPAEFSYPVDNQRGSGLAGPKRSSV 294
Query: 388 AKKGKPGRKARQPAGPASATPPGPREDLGATP 419
P P P +PPGP+ P
Sbjct: 295 VSPSHP------PPAPPLGSPPGPKPGFAPPP 320
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 56.2 bits (134), Expect = 5e-08
Identities = 48/140 (34%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 86 DLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPY--LKAPGLPPYPHYQQAPGGPQFLLP 143
D S L A G G+P+ P +L P P L P LPP P P F+ P
Sbjct: 527 DTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPP--------PDFMEP 578
Query: 144 YFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPT 203
PP+ P + G AG ELP PP PAP P P P +PPP + P
Sbjct: 579 --PPDFVPPPPPSYAGIAGS----ELPPPP-PPPPAPAPAPVPDSARPPP---AVAKRPP 628
Query: 204 LPPDAYSHLQGHLGHFPGPE 223
+PP + GH G G E
Sbjct: 629 VPPKRQEN-PGHPGGAGGGE 647
Score = 42.4 bits (98), Expect = 8e-04
Identities = 39/132 (29%), Positives = 48/132 (36%), Gaps = 20/132 (15%)
Query: 129 PHYQQAPGGPQFLLPYFPP-------EGPGPEALGFVGDAG------PAAFVELPLPPLE 175
P +AP P+ LP PP G L G G P F+ P PP
Sbjct: 503 PAVPRAPHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPP 562
Query: 176 EGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQG-HLGHFPGPEPLAFPVKELQG 234
LPPPPP +PPP + PP +Y+ + G L P P P P
Sbjct: 563 LDDPELPPPPPDFMEPPPDFV------PPPPPSYAGIAGSELPPPPPPPPAPAPAPVPDS 616
Query: 235 SGARPGVPLYPP 246
+ P V PP
Sbjct: 617 ARPPPAVAKRPP 628
Score = 29.3 bits (64), Expect = 7.0
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 362 EQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQ--PAGPASA 406
E PP P PP PAP+ R K P RQ P P A
Sbjct: 597 ELPPPPPPPPAPAPAPVPDSARPPPAVAKRPPVPPKRQENPGHPGGA 643
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 56.2 bits (134), Expect = 5e-08
Identities = 94/311 (30%), Positives = 108/311 (34%), Gaps = 64/311 (20%)
Query: 25 PKGPPNGKVLVASPKQAPRLG-LGPSGSSCSQGTRLP-----PTGFQMAPCGCFFDPRIY 78
PKGPP G V P A G GPSG+ GTR P PTG+ M
Sbjct: 271 PKGPP-GVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMP----------- 318
Query: 79 RIEWTTPDLGQSALYKLAASSGGPA--GVPSAPGSYLLEPQPYLKA----PGL--PPYPH 130
+ D G + + L G P G P G L P L PG PP P
Sbjct: 319 GLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPK 378
Query: 131 YQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEG-PAPLPPPPPKEN 189
+ PGGP P G GD GP+ P P E G P PP P
Sbjct: 379 GEAGPGGP-------------PGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGP 425
Query: 190 KPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFP--VKELQGSGARPGVPLYPPG 247
K P P P + +G LG PG L P + LQG P P+ P G
Sbjct: 426 KGEPGFTGRPGGPGVA--GALGQKGDLG-LPGQPGLRGPSGIPGLQG----PAGPIGPQG 478
Query: 248 LSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEV 307
L LK G G G+A P TA P PG + P G
Sbjct: 479 LPGLKGEPGLPGP-PGEGRAGEPGTAGPTGPPG----------VPGSPGITGPPGP---- 523
Query: 308 PGPALPDSSGG 318
PGP P + G
Sbjct: 524 PGPPGPPGAPG 534
Score = 42.4 bits (98), Expect = 8e-04
Identities = 94/357 (26%), Positives = 113/357 (31%), Gaps = 101/357 (28%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGP-GPEALGFVG 159
GP G P PG +P + PGL H Q P GP P F G GP G G
Sbjct: 86 GPRGPPGPPG---FPGKPGMGKPGL----HGQPGPAGP----PGFSRMGKAGPP--GLPG 132
Query: 160 DAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLP----PDAYSHLQGH 215
GP L P G L PP P P IT+P +P P + G
Sbjct: 133 KVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGP 192
Query: 216 LGHFPGP---------EPLAFP-VKELQGSGARPGVPLYP-------PGLSELKVAEVKE 258
G PGP + P + G G PG P P PGL L A +
Sbjct: 193 QGE-PGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDK 251
Query: 259 GALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTL----CEVPGPA-LP 313
G G P+ PGA P+G VPG A LP
Sbjct: 252 GE-SGPPGVPGPRGE---------------------PGAVGPKGPPGVDGVGVPGAAGLP 289
Query: 314 DSSGGNSADDIRSLCLPEELLS-FDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPAT 372
G + A P L+ Y +P + PGP
Sbjct: 290 GPQGPSGAKGEPGTRGPPGLIGPTGYGMPGL-----------------------PGPKGD 326
Query: 373 NTPA--PILSGKRKASTAKKGKPGRKARQPAG-----------PASATPPGPREDLG 416
PA P L G R + G+PG + Q G P PPGP+ + G
Sbjct: 327 RGPAGVPGLLGDR-GEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAG 382
Score = 33.1 bits (74), Expect = 0.48
Identities = 44/162 (27%), Positives = 55/162 (33%), Gaps = 50/162 (30%)
Query: 97 ASSGGPAGVPS--APGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEA 154
ASSGG AG + AP Y+ QP K P PP+
Sbjct: 26 ASSGGGAGGAAGYAPVKYI---QPMQKGPVGPPFRE------------------------ 58
Query: 155 LGFVGDAGPAAFVELPLP--PLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHL 212
G ++E+PLP P++ P PP P PP P P P L
Sbjct: 59 -------GKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGP----PGFPGKPGMGKPGL 107
Query: 213 QGHLGHFPGPEPLAFPVKELQGSGARPGVP--LYPPGLSELK 252
G P P P G PG+P + PPG L+
Sbjct: 108 HGQ------PGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLR 143
Score = 30.4 bits (67), Expect = 3.1
Identities = 34/104 (32%), Positives = 40/104 (38%), Gaps = 20/104 (19%)
Query: 87 LGQSALYKLAASSG--GPAGVPSAPG-SYLLEPQ--PYLKA-PGLPPYPHYQQA------ 134
LGQ L G GP+G+P G + + PQ P LK PGLP P +A
Sbjct: 444 LGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTA 503
Query: 135 --------PGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELP 170
PG P P PP PGP D A + LP
Sbjct: 504 GPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLP 547
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 55.5 bits (132), Expect = 9e-08
Identities = 57/174 (32%), Positives = 67/174 (38%), Gaps = 13/174 (7%)
Query: 97 ASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGP--EA 154
ASS A S P S + P P P L P P P GP LP PP G P
Sbjct: 386 ASSQQQAPPQSVPPSQIQAP-PMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRP 444
Query: 155 LGFVGDAGPAAFVELPLPPLEEGPAPLPPPPP-----KENKPPPVLITLPAEPTLPPDAY 209
G G GP + P PP P P P PPP + PP + PA P +PP
Sbjct: 445 PGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRP 504
Query: 210 SHLQGHLGHFPGPEPLA-FPVKELQGSGARPGVPLYPPGLSELKVAEVKEGALL 262
++ L GP P FP L PGV PP L + A+ A +
Sbjct: 505 GMMRPPLVPPLGPAPPGLFPPAPL----PNPGVLSAPPNLIQRPKADDTSAATI 554
Score = 30.8 bits (68), Expect = 2.4
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 364 PPHPGPPATNTPA-PILSGKRKASTAKKGKPGRKARQPAGPASATPPGP 411
PP PP P P L G PGR P GP PPGP
Sbjct: 434 PPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGP 482
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 54.3 bits (129), Expect = 2e-07
Identities = 99/412 (24%), Positives = 127/412 (30%), Gaps = 122/412 (29%)
Query: 9 VIHHPARAPKQYLCRPPKGP-PNGKVLVASPKQAPRLGLGPS--GSSCSQGTRLPPTGFQ 65
V P AP RPP G P G P P P G S G+ PP +
Sbjct: 87 VCPQPPTAPT----RPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICE 142
Query: 66 MAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGL 125
P G P+ Y ++ + D+ A GPAG P PG P PG
Sbjct: 143 SCPTG----PQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPG-----PPGTSGHPGS 193
Query: 126 PPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPP 185
P P YQ PG P P PP PG +G +GPA ++G + P P
Sbjct: 194 PGSPGYQGPPGEPGQAGPSGPPGPPGA-----IGPSGPAG---------KDGESGRPGRP 239
Query: 186 PKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYP 245
+ P P PG ++G PG
Sbjct: 240 GERGLPGP--------------------------PG----------IKGPAGIPGF---- 259
Query: 246 PGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLC 305
PG+ + + + G G+ AP LP + + PG P G
Sbjct: 260 PGMKGHRGFDGRNGE---KGETGAPGLKGENGLPGE----------NGAPGPMGPRGAPG 306
Query: 306 EVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPP 365
E P LP ++G D R + QP
Sbjct: 307 ERGRPGLPGAAGARGNDGARG---------------------------------SDGQPG 333
Query: 366 HPGPPAT----NTPAPILSGKRKASTAKKGKPGRKARQ-PAGPASAT-PPGP 411
PGPP T +P S G PG++ P G A A PPGP
Sbjct: 334 PPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGP 385
Score = 39.7 bits (91), Expect = 0.005
Identities = 113/421 (26%), Positives = 127/421 (30%), Gaps = 116/421 (27%)
Query: 25 PKGPPNGKVLVASPKQAPRLGL----GPSGSSCSQGTRLPP--TGFQMAPCGCFFDPRIY 78
P GPP + GL GP GS +G PP GF AP G +P
Sbjct: 766 PIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAP-GQNGEPGGK 824
Query: 79 RIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGP 138
+ G+ GGP GV PG P PP P + G
Sbjct: 825 GERGAPGEKGE----------GGPPGVAGPPGG---------SGPAGPPGPQGVKGERGS 865
Query: 139 QFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPP---PPKENKPPPVL 195
P GPG A GF G G LP PP G P P P K+ P P
Sbjct: 866 --------PGGPG--AAGFPGARG------LPGPPGSNGNPGPPGPSGSPGKDGPPGPAG 909
Query: 196 IT-LPAEPTLP-PDAYSHLQGHLGHFPG-------PEPLAFP----VKELQGSGARPGVP 242
T P P + P + G G PG P PL + L G PG P
Sbjct: 910 NTGAPGSPGVSGPKGDAGQPGEKGS-PGAQGPPGAPGPLGIAGITGARGLAGPPGMPG-P 967
Query: 243 LYPPGLSELKVAEVKEGA--LLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEP 300
PG +K K GA L G P+ LA D D LPG
Sbjct: 968 RGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGS 1027
Query: 301 EGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALD 360
G + P + G
Sbjct: 1028 PGGKGDRGENGSPGAPGA------------------------------------------ 1045
Query: 361 EEQPPHPGPPATNTPAPILSGKRKAS--TAKKGKPGRKARQPAGPASAT-PPGPREDLGA 417
P HPGPP PA SG R S G PG PAG A P GPR D G
Sbjct: 1046 ---PGHPGPPGPVGPAG-KSGDRGESGPAGPAGAPG-----PAGSRGAPGPQGPRGDKGE 1096
Query: 418 T 418
T
Sbjct: 1097 T 1097
Score = 32.3 bits (72), Expect = 0.83
Identities = 88/337 (26%), Positives = 102/337 (30%), Gaps = 63/337 (18%)
Query: 25 PKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEWTT 84
P+GPP GK P+ P GP+G +G PP P G P
Sbjct: 604 PQGPP-GKNGETGPQGPP----GPTGPGGDKGDTGPP-----GPQGLQGLPGTGGPPGEN 653
Query: 85 PDLGQSALYKLAASSGGP-----AGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQ 139
G+ A + G P AG P G L P L+ PP P + GP
Sbjct: 654 GKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPP 713
Query: 140 FLLPYFPPEGPG-------PEALGFVGDAGPAAFVELPLPPLEEG-PAPLPPPPPKENKP 191
PP G P G +G GP P P +G P P P
Sbjct: 714 -----GPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIG 768
Query: 192 PPVLITLPAE------PTLPPDAYSH-LQGHLGHFPGPEPLAFPVKELQ----------- 233
PP P + P LP A G G P P FP Q
Sbjct: 769 PPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERG 828
Query: 234 -----GSGARPGV--------PLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPD 280
G G PGV P PPG +K + G+ G G A P AR L P
Sbjct: 829 APGEKGEGGPPGVAGPPGGSGPAGPPGPQGVK---GERGSPGGPGAAGFP-GARGLPGPP 884
Query: 281 KVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSG 317
PG P G P P SG
Sbjct: 885 GSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSG 921
Score = 30.8 bits (68), Expect = 2.4
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 101 GPAGVPSAPGSYLLE----PQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALG 156
GPAG P + G+ PQ + A G P P +PGG + P P PG +G
Sbjct: 354 GPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPG--LMG 411
Query: 157 FVGDAGPA 164
G GPA
Sbjct: 412 ARGPPGPA 419
Score = 30.8 bits (68), Expect = 2.4
Identities = 39/149 (26%), Positives = 47/149 (31%), Gaps = 18/149 (12%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAP-GLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVG 159
GP G+P G P P G P PGGP P GPG +
Sbjct: 495 GPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGK---- 550
Query: 160 DAGPAAFVELPLPPLEEGPAPLP-PPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGH 218
P PP +G + P PP P + P ++ P D G G
Sbjct: 551 ----------PGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPK--GNDGAPGKNGERGG 598
Query: 219 FPGPEPLAFPVKELQGSGARPGVPLYPPG 247
GP P P K + P P P G
Sbjct: 599 PGGPGPQGPPGKNGETGPQGPPGPTGPGG 627
Score = 30.8 bits (68), Expect = 2.4
Identities = 67/250 (26%), Positives = 83/250 (33%), Gaps = 48/250 (19%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEG-PG-PEALGFV 158
GPAG APG P APG P P + G + G PG P A G
Sbjct: 1068 GPAGPAGAPG-----PAGSRGAPG-PQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSP 1121
Query: 159 GDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGH 218
G AG + P P GP PP K+ GH G
Sbjct: 1122 GPAGQQGAIGSPGPAGPRGPVGPSGPPGKDG----------------------TSGHPGP 1159
Query: 219 FPGPEPLA-FPVKELQGSGARPGV--PLYPPGLSELKVAEVKEGALLGAGKAKAPKTARA 275
P P + +GS PG P PPG V A+ G G KA A
Sbjct: 1160 IGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGFAPY 1219
Query: 276 LA---LPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSL--CLP 330
+ K+ ++ M + G ++ PD S N A + R L C P
Sbjct: 1220 YGDEPMDFKINTDEIMTSLKSVNG---------QIESLISPDGSRKNPARNCRDLKFCHP 1270
Query: 331 EELLSFDYSV 340
EL S +Y V
Sbjct: 1271 -ELKSGEYWV 1279
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 54.3 bits (129), Expect = 2e-07
Identities = 74/257 (28%), Positives = 86/257 (33%), Gaps = 63/257 (24%)
Query: 95 LAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYP---------------HYQQAPG--- 136
LAA +G G PG P P PG P P H+ AP
Sbjct: 166 LAARAGPGPGPGPGPG-----PGP---GPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSL 217
Query: 137 ---GPQFLLPYFPPEGPGP--EALGFVGDAGPAAFVELPLPPLE---EGPAPLPPPPPKE 188
GP LLP P PG + FVG A P A P PP PA PPPPP
Sbjct: 218 VNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPA-PAAPSPPAAPAPAAPAAAPPPPP-- 274
Query: 189 NKPPPVLITLP---------AEPTLPPDAYSHLQGHLGHFPGPEPLA---FPVKELQGSG 236
P P + P A P +PP A + G G P P P A V G G
Sbjct: 275 --PAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPG 332
Query: 237 ARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPG 296
A P PG+ V + AP A+ LA +M + + G
Sbjct: 333 AAAAAP--APGVKAESPKRVVQA---------APPAAQTLAASGPASTAASMVIGPTMQG 381
Query: 297 ASEPEGTLCEVPGPALP 313
A P P P P
Sbjct: 382 AL-PSPAAVPPPAPGTP 397
Score = 37.0 bits (84), Expect = 0.034
Identities = 44/139 (31%), Positives = 48/139 (34%), Gaps = 34/139 (24%)
Query: 96 AASSGGPAGVPSAPGSYLLEPQPYLKA---------PGLPPYPHYQQAPGGPQ----FLL 142
AA +G A APG+ EP P +A PG PP P P GP L
Sbjct: 70 AAGAGPAAPAEGAPGA-APEPPPAGRARPGGGGPQRPG-PPSPRRPLVPAGPAPPAAKLR 127
Query: 143 PYFPPEG-----------------PGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPP 185
P PPEG P P G AGPAA P GP P P P
Sbjct: 128 P--PPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPG 185
Query: 186 PKENKPPPVLITLPAEPTL 204
P + P TL L
Sbjct: 186 PGKPAGPGAAQTLNGSAAL 204
Score = 33.1 bits (74), Expect = 0.48
Identities = 63/253 (24%), Positives = 77/253 (30%), Gaps = 42/253 (16%)
Query: 83 TTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLL 142
T P +G +A AA S A P+AP + P P PP P GP
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPP-----GHPAGPPTAA 294
Query: 143 PYFPP-------------EGPGPEA---LGFVGDAGPAAFVELPLPPLEEGPAPLPPPPP 186
P PP P P A G G GP A P P ++ P
Sbjct: 295 PAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVK-----AESPKR 349
Query: 187 KENKPPPVLITL----PAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVP 242
PP TL PA +QG L P P A P G G+P
Sbjct: 350 VVQAAPPAAQTLAASGPASTAASMVIGPTMQGAL-----PSPAAVPP---PAPGTPTGLP 401
Query: 243 LYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPG---ASE 299
G ++ G +A T A LP ++ F PG
Sbjct: 402 KGAAGAVTQSLSRTPTATTSGI-RATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRS 460
Query: 300 PEGTLCEVPGPAL 312
G L +P AL
Sbjct: 461 ENGQLLMIPQQAL 473
Score = 31.2 bits (69), Expect = 1.8
Identities = 59/236 (25%), Positives = 76/236 (32%), Gaps = 31/236 (13%)
Query: 177 GPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSG 236
G A P P E P A P PP + G PGP P+ +
Sbjct: 69 GAAGAGPAAPAEGAPG-------AAPEPPPAGRARPGGGGPQRPGPPSPRRPL--VPAGP 119
Query: 237 ARPGVPLYPPGLSEL-KVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLP 295
A P L PP A V A + AG AP A P + P
Sbjct: 120 APPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPG-----P 174
Query: 296 GASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFN 355
G G PGP +G +A + LL+ ++ + V+N
Sbjct: 175 GPGPGPG-----PGPGPGKPAGPGAAQTLNGSAA---LLNSHHAAAPAVSLVNNGPAAL- 225
Query: 356 FKALDEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGP 411
L +P PG TP P + + A P A PA PA+A PP P
Sbjct: 226 ---LPLPKPAAPGT-VIQTP-PFVGAAAPPAPAAPSPPAAPA--PAAPAAAPPPPP 274
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 54.3 bits (129), Expect = 2e-07
Identities = 67/226 (29%), Positives = 76/226 (33%), Gaps = 34/226 (15%)
Query: 25 PKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEWTT 84
P P+G A+P P G P+G S +PPTG P F
Sbjct: 46 PSSVPSGLPPSATPSTVP-FGPAPTGMYPS----VPPTGPPPGPPAPF------------ 88
Query: 85 PDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPY 144
P G S GGP P+ PG P P P P P AP P P
Sbjct: 89 PPSGPSC-----PPPGGPYPAPTVPGPGPTGPYPTPNMP-FPELPRPYGAPTDPAAAGPL 142
Query: 145 FP--PEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPV-LITLPAE 201
P GP A G +G P + P P GP P PPPP PPV T+P
Sbjct: 143 GPWGSMSSGPWAPG-MGGQYPTPNMPYPSP----GPYPAPPPPQAPGAAPPVPWGTVPPG 197
Query: 202 PTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPPG 247
PP Y G +P P P Q G P P G
Sbjct: 198 AWGPPAPY---PAPTGSYPTPGLYPTPSNPFQVPSGPSGAPPMPGG 240
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 53.9 bits (128), Expect = 3e-07
Identities = 85/323 (26%), Positives = 99/323 (30%), Gaps = 69/323 (21%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGD 160
GP G P G + APG P P + PG P P PP P G G+
Sbjct: 250 GPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGE 309
Query: 161 AGPAAFVELPLPPLEEGPAPLPPPP----PKENKPPPVLITLPAEPTLPPDAYSHLQGHL 216
GPA P E+GPA LP P P N P +P LP G
Sbjct: 310 RGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLP--------GPK 361
Query: 217 GHFPGPEPLAFP-VKELQGSGARPGVPLYP--PGLSELKVAEVKEGALLGAGKAKAPKTA 273
G P +P K +GS G P YP PGL K G PK
Sbjct: 362 GETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPK----------GNPGLPGPKGD 411
Query: 274 RALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDI---RSLCLP 330
+ P PG P G P +G A I R P
Sbjct: 412 PGVGGP---------------PGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGP 456
Query: 331 EELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKK 390
+ F S + P PGPP PA I + T
Sbjct: 457 PGIPGFPGS---------------------KGDPGSPGPPG---PAGIATKGLNGPTGPP 492
Query: 391 GKPGRKAR--QPAGPASATPPGP 411
G PG + +P P PPGP
Sbjct: 493 GPPGPRGHSGEPGLPGPPGPPGP 515
Score = 44.3 bits (103), Expect = 2e-04
Identities = 80/315 (25%), Positives = 98/315 (31%), Gaps = 89/315 (28%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFP--PEGPGPEA-LGF 157
GPAG PG +P +PGL P PG P P P PG G
Sbjct: 66 GPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGP 125
Query: 158 VGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLG 217
GD GPA P P PP P P P I++P +P G G
Sbjct: 126 KGDVGPAGL-----------PGPRGPPGP-PGIPGPAGISVPGKP-----------GQQG 162
Query: 218 HFPGPEPLAFPVKELQGSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALA 277
P P FP G PGV PG++ K E+ GA G+
Sbjct: 163 PTGAPGPRGFP-----GEKGAPGV----PGMNGQK-GEMGYGAPGRPGERG--------- 203
Query: 278 LPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFD 337
LPG P GP+ P G + + + + D
Sbjct: 204 ----------------LPGPQGP-------TGPSGPPGVGKRGENGVPG----QPGIKGD 236
Query: 338 YSVPEILDTVSNVDYFFNFKALDEEQPPHP-GPPATNTPAPILSGKRKASTAKKGKPGRK 396
P + + PP P GPP P I + + G PG K
Sbjct: 237 RGFPGEMGPIG---------------PPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTK 281
Query: 397 ARQPAGPASATPPGP 411
P P A PPGP
Sbjct: 282 G-LPGAPGIAGPPGP 295
Score = 37.7 bits (86), Expect = 0.020
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGD 160
GP G P PG+ + + PG+P +P + PG P PGP + G
Sbjct: 440 GPRGAPGIPGT-----RGPIGPPGIPGFPGSKGDPGSPG---------PPGPAGIATKGL 485
Query: 161 AGPAAFVELPLPPLEEGPAPLPPPPPKENKP 191
GP P P G LP PP P
Sbjct: 486 NGPTGPPGPPGPRGHSGEPGLPGPPGPPGPP 516
Score = 36.6 bits (83), Expect = 0.044
Identities = 34/110 (30%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Query: 100 GGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPG-PEALGFV 158
GGP G+P G P PG + APG P P PP PG P + G
Sbjct: 415 GGPPGLPGPVG-----PAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDP 469
Query: 159 GDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDA 208
G GP + L P PP P+ + P L P P P A
Sbjct: 470 GSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQA 519
Score = 33.5 bits (75), Expect = 0.37
Identities = 43/152 (28%), Positives = 54/152 (35%), Gaps = 11/152 (7%)
Query: 96 AASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEAL 155
A GPAG+P PG L P + G P PG P P PG A
Sbjct: 321 AKGEQGPAGLPGKPG--LTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPG--AK 376
Query: 156 GFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLP-PDAYSHLQG 214
G G G P P +GP P P + P + P LP P + +G
Sbjct: 377 GERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDP-----GVGGPPGLPGPVGPAGAKG 431
Query: 215 HLGHFPGPEPLAFP-VKELQGSGARPGVPLYP 245
GH P P + +G PG+P +P
Sbjct: 432 MPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFP 463
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 53.5 bits (127), Expect = 3e-07
Identities = 59/217 (27%), Positives = 76/217 (35%), Gaps = 51/217 (23%)
Query: 85 PDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQP---YLKAPGL---------------- 125
P LG A + GP+ P P LL P P +LK P
Sbjct: 448 PFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAAREDGEILEELFFG 507
Query: 126 ---------PPYPHYQQAPGGPQFLLP------YFPPEGPGPEALGFVGDAG-----PAA 165
PP PH + G P + PP P P ++G PA
Sbjct: 508 TEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNSNSGSHSSSPAG 567
Query: 166 FVELPLPPL---EEGPAPLPPPPPKENKPPPVL-ITLPAEPTLPPDAYSHLQGHLGHFPG 221
V P PP P P PP P + + PP++ +TL P P + + G
Sbjct: 568 PVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPES 627
Query: 222 PEP-LAFPVKELQGSGARPGVPL------YPPGLSEL 251
P P ++FP G G PG PL PPG+ EL
Sbjct: 628 PRPRVSFPKTPEVGPGPPPG-PLSKAPQPVPPGVGEL 663
Score = 38.5 bits (88), Expect = 0.012
Identities = 34/105 (32%), Positives = 36/105 (34%), Gaps = 31/105 (29%)
Query: 169 LPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEP-----------TLPPDAYS------- 210
LPLPP PLPPPPP PPP L L P TL DA+
Sbjct: 244 LPLPP-----PPLPPPPPPPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSA 298
Query: 211 --------HLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPPG 247
H H +P P A P A PG PPG
Sbjct: 299 PPERQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPPG 343
Score = 32.3 bits (72), Expect = 0.83
Identities = 107/443 (24%), Positives = 145/443 (32%), Gaps = 94/443 (21%)
Query: 26 KGPPNGKVLVASPKQAPRLG-LGPSGSSCSQGTR---LPPTGFQMAPCGCFFDPRIYRIE 81
+GPP A P R G LGP S S GT+ PPT
Sbjct: 509 EGPPRP----APPPLPHREGFLGPPASRFSVGTQDSHTPPTP------------------ 546
Query: 82 WTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYL--KAPGLPPYPHYQQAPGGPQ 139
TP S ++SG + P+ P S+ P PYL LP P Q P P
Sbjct: 547 -PTPTTSSSN-----SNSGSHSSSPAGPVSF--PPPPYLARSIDPLPRPPSPAQNPQDPP 598
Query: 140 FL-----LPYFPP--------------EGPGPE-ALGFVGDAGPAAFVELPLPPLEEGPA 179
+ LP PP E P P + + GP P PL + P
Sbjct: 599 LVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGP----PPGPLSKAPQ 654
Query: 180 PLPP--------PPPKENKPPPVL---ITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFP 228
P+PP P + PP L PAE + PD +++ L E
Sbjct: 655 PVPPGVGELPARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMKMLDESIRKE----E 710
Query: 229 VKELQGSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAM 288
++ +G P PL P + L+ + A A A T E+
Sbjct: 711 EQQQHEAGVAPQPPLKEP-FASLQSPFPTDTAPTTTAPAVAVTTTTTTTTTTTATQEEEK 769
Query: 289 KLFDCLPGASEPEGTLCEVPGPALPD---SSGGNSADDIRSLCLPEELLSFDY-----SV 340
K P A P L + P P+ P + A ++SL E + Y +V
Sbjct: 770 K----PPPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCYRGTGAAV 825
Query: 341 PEILDTVSNVDYFFNFKALDEEQPP-HPGPPATNTPAPILSGKRKASTAKKGKP---GRK 396
+ Y + PP P A +P P S + ST+ G P R+
Sbjct: 826 STRPGPLPTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSSSQFSTS--GGPWARERR 883
Query: 397 ARQPAGPASATPPGPREDLGATP 419
A + P TP P L P
Sbjct: 884 AGEEPVPGPMTPTQPPPPLSLPP 906
Score = 30.0 bits (66), Expect = 4.1
Identities = 42/154 (27%), Positives = 52/154 (33%), Gaps = 32/154 (20%)
Query: 123 PGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEAL-------------GFVGDAGPAAFVEL 169
P LPP P + P Q P PP P P +L + G +
Sbjct: 773 PALPPPPPLAKFPPPSQPQPP--PPPPPSPASLLKSLASVLEGQKYCYRGTGAAVSTRPG 830
Query: 170 PLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFP-------GP 222
PLP + P PP PP A+ + P A S Q P G
Sbjct: 831 PLPTTQYSPG----PPSGATALPPTSAAPSAQGSPQPSASSSSQFSTSGGPWARERRAGE 886
Query: 223 EPLAFPVKELQGSGARPGVPL-YPPGLSELKVAE 255
EP+ P+ Q P PL PP SE +V E
Sbjct: 887 EPVPGPMTPTQ-----PPPPLSLPPARSESEVLE 915
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 53.1 bits (126), Expect = 5e-07
Identities = 83/339 (24%), Positives = 111/339 (32%), Gaps = 104/339 (30%)
Query: 116 PQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPG--PEALGFVGDAGPAAF---VELP 170
P P A P PH G L PP P P L P+A V L
Sbjct: 765 PPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLL 824
Query: 171 LPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVK 230
P +G AP PPPPP PPP P +P +HL+ H P P P +
Sbjct: 825 EPATRDG-APQPPPPPP---PPP--------PPMPLQLEAHLRSHGLEPAAPSPRLRPEE 872
Query: 231 ELQGSGARPGV-----PLYPPGLSELKV----AEVKEGALLGAGKAKAPKTARA------ 275
L GA + PL PP + V +E K+ A GA ++ +P+ +A
Sbjct: 873 SLDPPGAMQELLGALEPL-PPAPGDTGVGPPNSEGKDPA--GAYRSPSPQGTKAPRFVPL 929
Query: 276 --LALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEEL 333
+ PD +L ++ F P + + GG +ADD PE
Sbjct: 930 TSICFPDSLLQDEERSFF------------------PTMEEMFGGGAADDYGKAGPPE-- 969
Query: 334 LSFDYSVPEILDTVSNVDYFFNFKALDEEQP-----PHPGPPATNTPAPILSGKRKASTA 388
DE P P PGPPA + P G+ +
Sbjct: 970 --------------------------DEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGP 1003
Query: 389 KKGKPGRKARQP----------------AGPASATPPGP 411
+ G +P +GP A PP P
Sbjct: 1004 ETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPP 1042
Score = 43.9 bits (102), Expect = 3e-04
Identities = 81/320 (25%), Positives = 97/320 (30%), Gaps = 56/320 (17%)
Query: 129 PHYQQAPGGPQFLLPYFPPEG-PGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPP- 186
P P GP P P PGP L + A E PL LEE P P PPP P
Sbjct: 1413 PKDTSTPDGP----PLAPAAAVPGPPPLPGLPSANSNGTPEPPL--LEEKPPPTPPPAPT 1466
Query: 187 -KENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYP 245
+ PPP PA P+ PP L P P PL P A P P P
Sbjct: 1467 PQPQPPPPPPPPQPALPSPPP-----LVAPTPSSPPPPPLPPPPPP-----AMPSPPPPP 1516
Query: 246 PGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLC 305
P + A +E A + P T R L L K D G S EG
Sbjct: 1517 PPAAAPLAAPPEEPAAPSPEDPELPDT-RPLHLAKKQETAAVCGETDEEAGESGGEGIFR 1575
Query: 306 E----------VPGPALPDSSGGNS------------------ADDIRSLCLPEELLS-- 335
E +P L +G D R C L
Sbjct: 1576 ERDEFVIRAEDIPSLKLALQTGREPPPIWRVQKALLQKFTPEIKDGQRQFCATSNYLGYF 1635
Query: 336 ------FDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAK 389
+ + L+ V+ DY +PP P + P+ +G A K
Sbjct: 1636 GDAKNRYQRLYVKFLENVNKKDYVRVCARKPWHRPPVPVRRSGQAKNPVSAGGSSAPPPK 1695
Query: 390 KGKPGRKARQPAGPASATPP 409
P K P S PP
Sbjct: 1696 APAPPPKPETPEKTTSEKPP 1715
Score = 42.7 bits (99), Expect = 6e-04
Identities = 51/182 (28%), Positives = 60/182 (32%), Gaps = 22/182 (12%)
Query: 25 PKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEWTT 84
P P G V P + G S QGT+ P F CF D + E +
Sbjct: 889 PLPPAPGDTGVGPPNSEGKDPAGAYRSPSPQGTKAPR--FVPLTSICFPDSLLQDEERSF 946
Query: 85 PDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPY 144
+ AA G AG P G P PG P Y Y PY
Sbjct: 947 FPTMEEMFGGGAADDYGKAGPPEDEGDPKAGAGP---PPGPPAYDPYG----------PY 993
Query: 145 FP--PEGPGPEALGFVGDAG-----PAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLIT 197
P G GPE G D P+ PL ++ GP PPPP PPP +
Sbjct: 994 CPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPAPAS 1053
Query: 198 LP 199
P
Sbjct: 1054 EP 1055
Score = 42.0 bits (97), Expect = 0.001
Identities = 49/146 (33%), Positives = 56/146 (38%), Gaps = 30/146 (20%)
Query: 83 TTPDLGQSALYKLAASSGGPA--GVPSA-----PGSYLLEPQPYLKAPGLP-PYPHYQQA 134
+TPD L AA G P G+PSA P LLE +P P P P P
Sbjct: 1417 STPD--GPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPP 1474
Query: 135 PGGPQFLLPYFPP-EGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPP-------PP 186
P PQ LP PP P P + P + P PP P P PPP PP
Sbjct: 1475 PPPPQPALPSPPPLVAPTPSS-------PPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPP 1527
Query: 187 KENKPPPVLITLPAEPTLPPDAYSHL 212
+E P P +P LP HL
Sbjct: 1528 EEPAAPS-----PEDPELPDTRPLHL 1548
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/196 (25%), Positives = 68/196 (34%), Gaps = 19/196 (9%)
Query: 47 GPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEWTTP--DLGQSALYKLAASSGGPAG 104
GP S + + L G Q P + W T G + L+ ++ + G +
Sbjct: 83 GPDASVMNLISALESRGPQPGPSASSLLSQFRSPSWQTAMHTPGPTELF-ISGALPGSST 141
Query: 105 VPSA--------PGSYLLEPQPYLKAPGLPPYPHYQQAPG--GPQFLLPYFPPEGPG-PE 153
PS+ P S+ P P + L P A G P +L P + P P
Sbjct: 142 FPSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPS 201
Query: 154 ALGFV-----GDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDA 208
+LGF G GPA PP GP PPPP +L + A +
Sbjct: 202 SLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQS 261
Query: 209 YSHLQGHLGHFPGPEP 224
L G PGP P
Sbjct: 262 SPQLYNFSGAAPGPPP 277
Score = 33.1 bits (74), Expect = 0.48
Identities = 66/236 (27%), Positives = 77/236 (32%), Gaps = 59/236 (25%)
Query: 24 PPKGPPNGKVLVAS-----PKQAPRLGLGPSGSSC-----SQGTRLPPTGFQMAPCGCFF 73
P K P+G AS P+ A G G G S G + G+ A G
Sbjct: 346 PSKAGPSGATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGA-- 403
Query: 74 DPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQ 133
T P +S S GGPA + KA G
Sbjct: 404 ---------TRPPPPRSTATPKCQSLGGPAAAYATG-----------KASGAGGAGGQAY 443
Query: 134 APGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPP 193
+PG PQ LL GP+A G G A +L P G PP P PPP
Sbjct: 444 SPGQPQGLL--------GPQAYGQGFGGGQAQ--DLSKAPSYSGG----PPQPPSGPPPP 489
Query: 194 VLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPPGLS 249
L T + PD LQG L G EP P Q G+P P LS
Sbjct: 490 GLATC---QSYSPD---QLQGQLYGVQG-EPYPGPAAHSQ------GLPTASPSLS 532
Score = 32.0 bits (71), Expect = 1.1
Identities = 49/170 (28%), Positives = 63/170 (37%), Gaps = 43/170 (25%)
Query: 92 LYKLAASSGGPAGVPSAPGS------------------YLLEPQPYLKAPGLPPYPHYQQ 133
L K + SGGP PS P Y ++ +PY PG P H Q
Sbjct: 469 LSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPY---PG--PAAHSQG 523
Query: 134 APGGPQFLLPYFPPEGP---------GPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPP 184
P L Y P GP +LG G+A P+ + PL+ PA PP
Sbjct: 524 LPTASPSL-SYSTGHSPALSGHGGGWGPSSLGGGGEASPSHIIR----PLQSPPATGRPP 578
Query: 185 PPKENKPPPVLIT--LPAEPTL-PPDAYSHLQ---GHLGHFPGPEPLAFP 228
P ++ L + P L PP A S+ G+ G G E LA P
Sbjct: 579 GVGSPGAPGKYLSSVLASAPFLAPPGAGSYAAGAGGYKGKGDGSELLAGP 628
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 52.4 bits (124), Expect = 8e-07
Identities = 62/181 (34%), Positives = 72/181 (39%), Gaps = 29/181 (16%)
Query: 100 GGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEAL---- 155
GGP G+P PG P A GL P + A GGP P P G E
Sbjct: 683 GGPKGLPGLPG-----PPGPTGAKGLRGIPGFAGADGGPG---PRGLPGDAGREGFPGPP 734
Query: 156 GFVGDAGPAAFVELPLPPLEEGPAPLPPP--PPKENKPPPVLITLPAEPTLPPDAYSHLQ 213
GF+G G V LP P GP LP P PP E P + L A+P DA Q
Sbjct: 735 GFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEV--LGAQPGPRGDAGVPGQ 792
Query: 214 GHLGHFPGPE-PLAFPVKE----LQGSGARPGVP-------LY-PPGLSELKVAEVKEGA 260
L PG P F + + G +PG+P LY PPGL A +EG
Sbjct: 793 PGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGP 852
Query: 261 L 261
L
Sbjct: 853 L 853
Score = 50.4 bits (119), Expect = 3e-06
Identities = 47/154 (30%), Positives = 55/154 (35%), Gaps = 32/154 (20%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKA--------PGLPPYPHYQQAPGGPQFLLPYFPPEGPGP 152
G AG P PG P P L PG P Q PG P P G G
Sbjct: 338 GEAGDPGPPGLPAYSPHPSLAKGARGDPGFPGAQGEPGSQGEPGDPGLPGPPGLSIGDGD 397
Query: 153 EALGFVGDAGPAAFVELP-LPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSH 211
+ G G+ GP F+ P +P L GP P P K P P P LP
Sbjct: 398 QRRGLPGEMGPKGFIGDPGIPALYGGP---PGPDGKRGPPGP--------PGLPGP---- 442
Query: 212 LQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYP 245
PGP+ F +K +G PG+P P
Sbjct: 443 --------PGPDGFLFGLKGAKGRAGFPGLPGSP 468
Score = 40.4 bits (93), Expect = 0.003
Identities = 93/358 (25%), Positives = 120/358 (33%), Gaps = 68/358 (18%)
Query: 99 SGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPH--YQQAPGGPQFLLPYFPPEGPGPEALG 156
S G G P G + +PY LP Y+ PG P + PP PG
Sbjct: 152 SEGFTGPPGPQGPKGQKGEPY----ALPKEERDRYRGEPGEPGLVGFQGPPGRPG----- 202
Query: 157 FVGDAGPAAFVELPLPPLEEGP----------------------APLPPPPPKENKPPPV 194
VG GP P PP GP P P P + P
Sbjct: 203 HVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKGEKGDVGQPGPNGIPSDTLHP-- 260
Query: 195 LITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPPGLSELKVA 254
I P T PD Y +G G PG ++ +K +G PG+ Y PGLS K +
Sbjct: 261 -IIAPTGVTFHPDQYKGEKGSEGE-PGIRGIS--LKGEEGIMGFPGLRGY-PGLSGEKGS 315
Query: 255 EVKEGA--LLG----------AGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEG 302
++G+ L G G+A P A L + PGA G
Sbjct: 316 PGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARGDPGFPGAQGEPG 375
Query: 303 TLCEVPGPALPDSSGGNSADDIRSLCLPEEL----LSFDYSVPEILDTVSNVDYFFNFKA 358
+ E P LP G + D + LP E+ D +P + D K
Sbjct: 376 SQGEPGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPALYGGPPGPD----GKR 431
Query: 359 LDEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLG 416
P PGPP P L G K + + G PG P P + P G + D G
Sbjct: 432 GPPGPPGLPGPPG---PDGFLFG-LKGAKGRAGFPG----LPGSPGARGPKGWKGDAG 481
Score = 35.8 bits (81), Expect = 0.075
Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 101 GPAGVPSAPGSYLLE----PQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALG 156
G AGVP PG L P + + G+P P + PG P GP G
Sbjct: 785 GDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLP------------GPS--G 830
Query: 157 FVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKP 191
G GP P P +EGP LP P +E P
Sbjct: 831 QPGLYGPPGLHGFPGAPGQEGPLGLPGIPGREGLP 865
Score = 32.0 bits (71), Expect = 1.1
Identities = 50/200 (25%), Positives = 64/200 (32%), Gaps = 32/200 (16%)
Query: 23 RPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEW 82
R P GPP L S G +G+ + GT P T G P ++ +
Sbjct: 1295 RGPPGPPGSAALPGSK--------GDTGNPGAPGT--PGTKGWAGDSGPQGRPGVFGLPG 1344
Query: 83 TTPDLGQSALYKLAASSG-----------GPAGVPSAPGSYLLE-----PQPYLKAPGLP 126
G+ +G G G P APG+ PQ PG
Sbjct: 1345 EKGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTV 1404
Query: 127 PYPHYQQAPGGPQFLLPYFPPEGPG-PEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPP 185
+ PG P + P PP PG A G G G +P +EGP P
Sbjct: 1405 GPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPI 1464
Query: 186 PKENKPPPVLITLPAEPTLP 205
+E P P P LP
Sbjct: 1465 GQEGAP-----GRPGSPGLP 1479
Score = 30.4 bits (67), Expect = 3.1
Identities = 58/218 (26%), Positives = 66/218 (30%), Gaps = 45/218 (20%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGD 160
G G+P PG + P PG P YP G P + GP LG G
Sbjct: 584 GFPGLPGPPGDGIKGP------PGDPGYPGIPGTKGTPGEM---------GPPGLGLPGL 628
Query: 161 AGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFP 220
G F G A LP PP P P P + D + G
Sbjct: 629 KGQRGF---------PGDAGLPGPPGFLGPPGPA--GTPGQIDCDTDVKRAVGGDRQEAI 677
Query: 221 GPEPLAFPVKELQGSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPD 280
P + P K L G PG P G L+ GA G G P A P
Sbjct: 678 QPGCIGGP-KGLPGLPGPPG----PTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPG 732
Query: 281 KVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGG 318
PG P G+ V P PD S G
Sbjct: 733 P-------------PGFIGPRGSKGAVGLPG-PDGSPG 756
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 52.0 bits (123), Expect = 1e-06
Identities = 105/430 (24%), Positives = 142/430 (33%), Gaps = 90/430 (20%)
Query: 38 PKQAPRLGLGPS-GSSCSQGT-RLPPTGFQMAPC--GCFFDPRIYRI-EWTTPDLG-QSA 91
P ++P L PS G S GT LPP G P G P+ R+ +P S+
Sbjct: 570 PPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSS 629
Query: 92 LYKLAASSGGPAGVP-SAP-------GSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLP 143
L L +SS PA S P +++ P P + AP PP P P P
Sbjct: 630 LTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPP----PSKPRSPNPAAP 685
Query: 144 YF--PPEGPGPEALGFVGDAGPAAFVELPLPPLEEGP------APLPPPPPKENKPPP-- 193
P PGP + P + L PL+E P +P P PPP + PPP
Sbjct: 686 ALAAPAVVPGPVSTTDASPQSPPT-PQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPT 744
Query: 194 ----VLITLPAE-------------PTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSG 236
V++ P+ P PP A + FP PE F V +
Sbjct: 745 KKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSV-----AS 799
Query: 237 ARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPG 296
P P P L A L +P A P P
Sbjct: 800 PEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAP--------------APA 845
Query: 297 ASEPEGTLCEVP--GPALPDSSGGNSADDIRSLCLPEELLSF----DYSVPEILDTVSNV 350
+S P G + ++P P GG +D+ + + LL P T
Sbjct: 846 SSAP-GHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVGAPGGAPT---- 900
Query: 351 DYFFNFKALDEEQPPHP-----GPPATNTPAP---ILSGKRKASTAKKGKPGRKARQPAG 402
AL P P A+ PAP + + R + + G + QP G
Sbjct: 901 ------PALGPSAPQKPLRRALSGRASPVPAPSSGLHAAVRLKACSLAASEGLSSAQPNG 954
Query: 403 PASATPPGPR 412
P A P P+
Sbjct: 955 PPEAEPRPPQ 964
Score = 44.7 bits (104), Expect = 2e-04
Identities = 94/397 (23%), Positives = 140/397 (35%), Gaps = 66/397 (16%)
Query: 39 KQAPRLGLGPS--GSSCSQGTRLPPTGFQ-----MAPCGCFFDPRIYRIEWTTPDLGQSA 91
KQ P+L P+ GS + PP ++P G PR +P+ S
Sbjct: 528 KQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPR-------SPERTLSP 580
Query: 92 LYKLAASSGGP-------AGVPSAPGSYLLEPQPY----LKAPGLPPYPHYQQAPGGPQF 140
++ SG P AG P++PG P+P L++PG
Sbjct: 581 SSGYSSQSGTPTLPPKGLAGPPASPGK-AQPPKPERVTSLRSPGASVSSSLTSLCSSSS- 638
Query: 141 LLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPA 200
P + GP+ L +GD FV +PP + PAP PPP K P P L A
Sbjct: 639 --DPAPSDRSGPQILTPLGDR----FV---IPPHPKVPAPFSPPPSKPRSPNPAAPAL-A 688
Query: 201 EPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPPGLSELKVAEVKEGA 260
P + P S P P+ P++E P PP K+
Sbjct: 689 APAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKKPE 748
Query: 261 LLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNS 320
++ +AP + P L+D P E + ++ + P P
Sbjct: 749 VV----VEAPSASETAEEP----LQDPNWPPPPPPAPEEQDLSMADFPPP---------- 790
Query: 321 ADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILS 380
+ S+ PE + PE++ + + + P P PPA PAP
Sbjct: 791 EEAFFSVASPEP--AGPSGSPELVSSPAASSSSATALQIQPPGSPDP-PPAPPAPAP--- 844
Query: 381 GKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGA 417
AS+A ++P G + P PRED+GA
Sbjct: 845 ----ASSAPGHVAKLPQKEPVGCSKGGGP-PREDVGA 876
Score = 37.7 bits (86), Expect = 0.020
Identities = 67/264 (25%), Positives = 86/264 (32%), Gaps = 95/264 (35%)
Query: 176 EGPAPLPPPPPKENKPPPVLITLPAEPT-----------LPPDAYSHLQGHLGHFPGPEP 224
+GP LPP P ++ +P LP PT PP+ + L P
Sbjct: 516 DGPLGLPPKPERKQQP-----QLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRP 570
Query: 225 LAFPVKEL---QGSGARPGVPLYPP-GLSELKVAEVKEGALLGAGKAKAPKTARALALPD 280
P + L G ++ G P PP GL+ G GKA+ PK R +L
Sbjct: 571 PRSPERTLSPSSGYSSQSGTPTLPPKGLA---------GPPASPGKAQPPKPERVTSLRS 621
Query: 281 KVLLEDAMKLFDCLPGASEPEG--TLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDY 338
PGAS +LC P D
Sbjct: 622 --------------PGASVSSSLTSLCSSSSDPAPS----------------------DR 645
Query: 339 SVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKAR 398
S P+IL + D F PPHP PA +P P KP ++
Sbjct: 646 SGPQILTPLG--DRFV--------IPPHPKVPAPFSPPP-------------SKP--RSP 680
Query: 399 QPAGPASATP---PGPREDLGATP 419
PA PA A P PGP A+P
Sbjct: 681 NPAAPALAAPAVVPGPVSTTDASP 704
Score = 35.4 bits (80), Expect = 0.098
Identities = 89/423 (21%), Positives = 140/423 (33%), Gaps = 46/423 (10%)
Query: 5 DKLCVIHHPARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGF 64
D+ + HP + P + PP P A AP + GP ++ + P
Sbjct: 656 DRFVIPPHP-KVPAPF--SPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQT 712
Query: 65 QMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPG 124
+ P + + + + P + + + P V AP + +P L+ P
Sbjct: 713 TLTPLQ---ESPVISKDQSPPPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEP-LQDPN 768
Query: 125 LPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPL------------- 171
PP P AP + FPP ++ AGP+ EL
Sbjct: 769 WPPPP--PPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQ 826
Query: 172 --PPLEEGPAPLPPPPPKENKPPPVLITLP-AEPTLPPDAYSHLQGHLGHFPGPEPLAFP 228
PP P P PP P + P + LP EP + +G P P
Sbjct: 827 IQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVG-APLVTPSLLQ 885
Query: 229 VKELQGSGARPGVPLYPPGLSELKVAEVKEGALLG-AGKAKAPKTARALALPDKVLLEDA 287
+ L+ GA G P P L + AL G A AP + L A
Sbjct: 886 MVRLRSVGAPGGAP--TPALGPSAPQKPLRRALSGRASPVPAPSSG----------LHAA 933
Query: 288 MKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTV 347
++L C ASE + + GP + S S + P +T
Sbjct: 934 VRLKACSLAASEGLSS-AQPNGPPEAEPRPPQSPASTASFIFSKGSRKLQLERPVSPETQ 992
Query: 348 SNV--DYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPAS 405
+++ + +++ E++PP + P P+ RK S P + A P +
Sbjct: 993 ADLQRNLVAELRSISEQRPPQAPKKSPKAPPPV---ARKPSVGVP-PPASPSYPRAEPLT 1048
Query: 406 ATP 408
A P
Sbjct: 1049 APP 1051
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 51.6 bits (122), Expect = 1e-06
Identities = 82/331 (24%), Positives = 115/331 (34%), Gaps = 58/331 (17%)
Query: 102 PAGVPSAPGSYLLEPQPYLKAPG---LPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFV 158
P GV S +P L G L P P ++ P P P P +
Sbjct: 1213 PVGVEEPADSREPPEEPGLSQEGAMLLSPEPPAKEVEARP----PLSPERAPEHD---LE 1265
Query: 159 GDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGH 218
+ P + LPL P P P P PP + PP T + P++PP+ + + H H
Sbjct: 1266 VEPEPPMMLPLPLQP----PLPPPRPPRPPSPPPEPETTDASHPSVPPEPLA--EDHPPH 1319
Query: 219 FPGPEPLAFPVKELQGSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALAL 278
PG L + + Q + P P P LS + L + P + +
Sbjct: 1320 TPG---LCGSLAKSQSTETVPATPGGEPPLS-------GGSSGLSLSSPQVPGSPFSYPA 1369
Query: 279 PDKVLLEDAM-----KLFDCLPGASEPEGTL----CEVPGPALPDSSGGNSADDIRSLCL 329
P L + + F P SEP G L C +P + SG ++ + L
Sbjct: 1370 PSPSLSSGGLPRTPGRDFSFTPTFSEPSGPLLLPVCPLPTGRRDERSGPLASPVLLETGL 1429
Query: 330 PEEL---LSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKAS 386
P L L ++P +L + + P P PP PAP+ S
Sbjct: 1430 PLPLPLPLPLPLALPAVLRA--------------QARAPTPLPPL--LPAPLAS----CP 1469
Query: 387 TAKKGKPGRKARQPAGPASATPPGPREDLGA 417
K KPGR R P S P R GA
Sbjct: 1470 PPMKRKPGRPRRSPPSMLSLDGPLVRPPAGA 1500
Score = 48.9 bits (115), Expect = 9e-06
Identities = 79/292 (27%), Positives = 99/292 (33%), Gaps = 53/292 (18%)
Query: 99 SGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPY------FPPEGPGP 152
+GG +G P + +PQ PP APG PY FPP P
Sbjct: 360 TGGSSGPP-----FKAQPQDSATFAHTPPPAQATPAPGFKSAFSPYQTPVAHFPPPPEEP 414
Query: 153 EALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYS-H 211
A G F P PP PLPP P + P T P P PPD S
Sbjct: 415 TATAAFGARDSGEFRRAPAPP------PLPPAEPLAKEKPG---TPPGPP--PPDTNSME 463
Query: 212 LQGHLGHFPGPEPLAFP-VKELQGSGARPGVPLYP-PGLSELKVAEVKEGALLGAGKAKA 269
L G PEP P L+ S A P P E+ + E + L +
Sbjct: 464 LGGRPTFGWSPEPCDSPGTPTLESSPAGPEKPHDSLDSRIEMLLKEQRTKLLF----LRE 519
Query: 270 PKTARALALPDKVLLEDAMKLFDCLP-GASEPEGTLCEVPGPALPDSSGGNSADDIRSLC 328
P + L + + + +L P G + G P + P S+G +DI
Sbjct: 520 PDSDTELQMEGSPISSSSSQLSPLAPFGTNSQPGFRGPTPPSSRPSSTG---LEDISPTP 576
Query: 329 LPEELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILS 380
LP D E LD L PP PGPP PA +LS
Sbjct: 577 LP------DSDEDEELDL-----------GLGPRPPPEPGPP---DPAGLLS 608
Score = 46.2 bits (108), Expect = 6e-05
Identities = 36/95 (37%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 169 LPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFP 228
LPLPP G PLPPPPP PPP P P LPP H P PL P
Sbjct: 679 LPLPP-PPGFPPLPPPPP----PPPPQPGFPMPPPLPPPPPPPPPAHPAVTVPPPPLPAP 733
Query: 229 VKELQGSGARPGVPLYPPGLSELKVAEVKEGALLG 263
+ P +P +PPGL V +V +LG
Sbjct: 734 -PGVPPPPILPPLPPFPPGL--FPVMQVDMSHVLG 765
Score = 45.4 bits (106), Expect = 9e-05
Identities = 110/437 (25%), Positives = 133/437 (30%), Gaps = 147/437 (33%)
Query: 13 PARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCF 72
P R P RPP PP + AS P L + G CG
Sbjct: 1284 PPRPP-----RPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGL-----------CGSL 1327
Query: 73 FDPRIYRIEWTTPDLGQSALYKLAASSGGPAG-------VPSAPGSYLLEPQPYLKAPGL 125
+ TP G+ L SGG +G VP +P SY P P L + GL
Sbjct: 1328 AKSQSTETVPATPG-GEPPL------SGGSSGLSLSSPQVPGSPFSYPA-PSPSLSSGGL 1379
Query: 126 PPYPHYQ-------QAPGGPQFLLPYFP------PEGPGPEALGFVGDAGPAAFVELPLP 172
P P P GP LLP P E GP A + + G + LPLP
Sbjct: 1380 PRTPGRDFSFTPTFSEPSGP-LLLPVCPLPTGRRDERSGPLASPVLLETGLPLPLPLPLP 1438
Query: 173 -PLE---------EGPAPLPP---------PPPKENKP-------------------PPV 194
PL P PLPP PPP + KP PP
Sbjct: 1439 LPLALPAVLRAQARAPTPLPPLLPAPLASCPPPMKRKPGRPRRSPPSMLSLDGPLVRPPA 1498
Query: 195 -------LITLPAEPTLPPDAYSH------LQGHLGHFPGP-----------------EP 224
L+ LP +P P +H L P P EP
Sbjct: 1499 GAALGRELLLLPGQPQTPVFPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEP 1558
Query: 225 LAFPVKELQGSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLL 284
P KEL +P P G E+ E E A + PK
Sbjct: 1559 TKLPFKELDNQWPSEAIPPGPRGRDEV-TEEYMELAKSRGPWRRPPKKRHE--------- 1608
Query: 285 EDAMKLFDCLPGASEPEGTLCEVPGPALPDSS-------------GGNSADDIRSLCLP- 330
D +P A PE P P S GG +DIR LC+
Sbjct: 1609 -------DLVPPAGSPE---LSPPQPLFRPRSEFEEMTILYDIWNGGIDEEDIRFLCVTY 1658
Query: 331 EELLSFDYSVPEILDTV 347
E LL D + + DT+
Sbjct: 1659 ERLLQQDNGMDWLNDTL 1675
Score = 44.7 bits (104), Expect = 2e-04
Identities = 50/163 (30%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 102 PAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDA 161
P A S L P PG PP P P PQ P PP P P A
Sbjct: 664 PGAAAVAAPSVLAPTLPLPPPPGFPPLPP-PPPPPPPQPGFPMPPPLPPPPPP---PPPA 719
Query: 162 GPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPG 221
PA V +P PPL P PP PPP+ LP P PP + +Q + H G
Sbjct: 720 HPA--VTVPPPPL--------PAPPGV-PPPPI---LPPLPPFPPGLFPVMQVDMSHVLG 765
Query: 222 PE----PLAFPVKE------LQGSGARPGVPLYPPGLSELKVA 254
+ P++F ++ + G GA P YPP ++ A
Sbjct: 766 GQWGGMPMSFQMQTQVLSRLMTGQGACP----YPPFMAAAAAA 804
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 51.2 bits (121), Expect = 2e-06
Identities = 70/252 (27%), Positives = 84/252 (33%), Gaps = 78/252 (30%)
Query: 175 EEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQG 234
+ GP LPPPPP PP L LP P PP+ + P P L PV +LQG
Sbjct: 1185 QAGPPELPPPPPPAEPPPTDLAHLP--PLPPPEGEARKPAKPPVSPKP-VLTQPVPKLQG 1241
Query: 235 SGARPG--VPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFD 292
S VPL PG E+K A G +PK P V +
Sbjct: 1242 SPTPTSKKVPLPGPGSPEVKRAH-------GTPPPVSPKPPPPPTAPKPVKAVAGLPSGS 1294
Query: 293 CLPG-----ASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTV 347
P A +P L + PG P S G + A
Sbjct: 1295 AGPSPAPSPARQPPAALAKPPG--TPPSLGASPA-------------------------- 1326
Query: 348 SNVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASAT 407
+PP PG PA + PA KP R A A A+A
Sbjct: 1327 ---------------KPPSPGAPALHVPA---------------KPPR-AAAAAAAAAAA 1355
Query: 408 PPGPREDLGATP 419
PP P E GA+P
Sbjct: 1356 PPAPPE--GASP 1365
Score = 45.4 bits (106), Expect = 9e-05
Identities = 54/193 (27%), Positives = 67/193 (34%), Gaps = 35/193 (18%)
Query: 96 AASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEAL 155
A+ GP +P P P P LPP P G + P PP P P
Sbjct: 1182 ASEQAGPPELPPPPPPAEPPPTDLAHLPPLPP-------PEG-EARKPAKPPVSPKP--- 1230
Query: 156 GFVGDAGPAAFVELPLPPLEEGP------APLPPPPPKENK-----PPPVLITLPAEPTL 204
+ P+P L+ P PLP P E K PPPV P PT
Sbjct: 1231 ----------VLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTA 1280
Query: 205 PPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPPGLSELKVAEVKEGALLGA 264
P + + G GP P P ++ + A+P P PP L GA
Sbjct: 1281 PKPVKA-VAGLPSGSAGPSPAPSPARQPPAALAKP--PGTPPSLGASPAKPPSPGAPALH 1337
Query: 265 GKAKAPKTARALA 277
AK P+ A A A
Sbjct: 1338 VPAKPPRAAAAAA 1350
Score = 37.7 bits (86), Expect = 0.020
Identities = 48/184 (26%), Positives = 63/184 (34%), Gaps = 39/184 (21%)
Query: 11 HHPARAPKQYLCRPPKGPP-NGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPC 69
H P P + R P PP + K ++ P P+L P+ +S + LP G
Sbjct: 1207 HLPPLPPPEGEARKPAKPPVSPKPVLTQP--VPKLQGSPTPTS--KKVPLPGPG------ 1256
Query: 70 GCFFDPRIYRIEWTTPDLGQSA---------LYKLAASSGGPAGVPSAPGSYLLEPQPYL 120
P + R T P + + +A G AG AP P
Sbjct: 1257 ----SPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALA 1312
Query: 121 KAPGLPPY----PHYQQAPGGPQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEE 176
K PG PP P +PG P +P PP A AA P PP E
Sbjct: 1313 KPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAA---------AAAAAAAAPPAPP--E 1361
Query: 177 GPAP 180
G +P
Sbjct: 1362 GASP 1365
Score = 36.6 bits (83), Expect = 0.044
Identities = 39/138 (28%), Positives = 49/138 (35%), Gaps = 34/138 (24%)
Query: 102 PAGVPSAPGSYLLEPQPYLKA-----------PGLPPYPHYQQAPGGPQFLLPYFPPEGP 150
PA P +P L +P P L+ PG P P ++A G P + P PP
Sbjct: 1221 PAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPG-PGSPEVKRAHGTPPPVSPKPPPPPT 1279
Query: 151 GPEALGFV-----GDAGP-----------AAFVELPLPPLEEGPAPLPPPPP------KE 188
P+ + V G AGP AA + P P G +P PP P
Sbjct: 1280 APKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVP 1339
Query: 189 NKPPPVLITLPAEPTLPP 206
KPP A PP
Sbjct: 1340 AKPPRAAAAAAAAAAAPP 1357
Score = 32.7 bits (73), Expect = 0.63
Identities = 91/409 (22%), Positives = 125/409 (30%), Gaps = 79/409 (19%)
Query: 59 LPPTGFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQ- 117
LPPT M+P P + P + + AA P VP+A + L P+
Sbjct: 811 LPPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGP-AAPGPAPPPVPTAVPTLCLPPEA 869
Query: 118 ------PYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVG-----------D 160
P +A L Y P + L+P GP VG D
Sbjct: 870 DAEPGRPKKRAHSLNRYAASDSEPERDELLVP--AAAGPYATVQRRVGRSHSVRAPAGAD 927
Query: 161 AGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFP 220
+ P ++GP PPPPPK + L EP + L G
Sbjct: 928 KNVNRSQSFAVRPRKKGP---PPPPPKRSSSALASANLADEPVPDAEPEDGLLGVRAQCR 984
Query: 221 GPEPLAFPVK--------------ELQGSGA---------------RPGVPLYPPGLSEL 251
LA V EL G RP P PG
Sbjct: 985 RASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRAARRPPEGHPTPRPASP--EPGRVAT 1042
Query: 252 KVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPA 311
+A VK +G G + R L+ P LL A + PG S PGP
Sbjct: 1043 VLASVKHKEAIGPG-GEVVNRRRTLSGPVTGLLATARR----GPGESAD-------PGPF 1090
Query: 312 LPDSSG---------GNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALDEE 362
+ D +G G + + L E + + + NV + +
Sbjct: 1091 VEDGTGRQRPRGPSKGEAGVEGPPLAKVEASATLKRRIRAKQNQQENVKFILTESDTVKR 1150
Query: 363 QPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGP 411
+P A P P LS + + +P A + AGP PP P
Sbjct: 1151 RPKAKEREAGPEPPPPLSVYHNGTGTVRRRP---ASEQAGPPELPPPPP 1196
Score = 30.0 bits (66), Expect = 4.1
Identities = 41/166 (24%), Positives = 53/166 (31%), Gaps = 33/166 (19%)
Query: 174 LEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQ 233
L+EGPAP PP I + P +P L HF P+ P K
Sbjct: 729 LDEGPAPGTPPREARPGRHGHSIKRASVPPVPGKPRQVLPPGTSHFTPPQT---PTK--- 782
Query: 234 GSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDC 293
RPG P LG AP TA+ P + +
Sbjct: 783 ---TRPGSP-----------------QALGGPHGPAPATAKVKPTPQLLPPTERPMSPRS 822
Query: 294 LPGASEPEGTLCEVP-------GPALPDSSGGNSADDIRSLCLPEE 332
LP + G +P GPA P + + +LCLP E
Sbjct: 823 LPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPPVPTAVPTLCLPPE 868
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 51.2 bits (121), Expect = 2e-06
Identities = 63/244 (25%), Positives = 80/244 (32%), Gaps = 33/244 (13%)
Query: 14 ARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFF 73
+R+P+ +P PP G P P GP ++ PP G P
Sbjct: 108 SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP----- 162
Query: 74 DPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLP--PYPHY 131
P G + + G P G P G+ +PQ PG P P P
Sbjct: 163 -----------PPQGDNKSRSSRSPPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQG 208
Query: 132 QQAPGGPQFLLPYFPPEGPGPEALGFVGDA-GPAAFVELPLPPLEEGPAPLPPPPPKENK 190
P GP P P+GP P+ A P + P P P PPPP K
Sbjct: 209 GNKPQGPP---PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 265
Query: 191 PPPVLITLPAEPTLP-----PDAYSHLQGHLGHFPGPEPLAFPVK---ELQGSGARPGVP 242
PPP P P P P + P +P P + + QG PG P
Sbjct: 266 PPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKP 325
Query: 243 LYPP 246
PP
Sbjct: 326 QGPP 329
Score = 50.1 bits (118), Expect = 4e-06
Identities = 85/341 (24%), Positives = 102/341 (29%), Gaps = 66/341 (19%)
Query: 96 AASSGG--PAGVPSAPGSYLLEPQPYLKAP-GLPPYPHYQQAP---GG--PQFLLPYFPP 147
A GG P G PS PG P P G PP P Q P GG PQ P P
Sbjct: 39 APPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 98
Query: 148 EGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLP-- 205
+GP P+ P + P P P PPPP K PPP P P P
Sbjct: 99 QGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 158
Query: 206 ---PDAYSHLQGHLGHFPGPEPLAFPVK---ELQGSGARPGVPLYPPGLSELK-VAEVKE 258
P + P +P P + + QG PG P PP K
Sbjct: 159 PQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 218
Query: 259 GALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGG 318
G G K+ A + P K G ++P+G P P GG
Sbjct: 219 GKPQGPPPQGDNKSQSARSPPGKPQGPPPQ-------GGNQPQGPPPPPGKPQGPPPQGG 271
Query: 319 NSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPI 378
N + PP PG P P P
Sbjct: 272 NK----------------------------------------PQGPPPPGKP--QGPPPQ 289
Query: 379 LSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGATP 419
K ++S + GKP Q PP P + G P
Sbjct: 290 GGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 330
Score = 46.2 bits (108), Expect = 6e-05
Identities = 58/227 (25%), Positives = 72/227 (31%), Gaps = 38/227 (16%)
Query: 23 RPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEW 82
+P PP G P P GP ++ PP G P
Sbjct: 179 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-------------- 224
Query: 83 TTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLP--PYPHYQQAPGGPQF 140
P G + + G P G P G+ +PQ PG P P P P GP
Sbjct: 225 --PPQGDNKSQSARSPPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQGGNKPQGPP- 278
Query: 141 LLPYFPPEGPGPE-ALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLP 199
P P+GP P+ P + P P P PPPP K PPP P
Sbjct: 279 --PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 336
Query: 200 AEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPP 246
P P G GP P + + + + PG P PP
Sbjct: 337 QGPPPP-----------GKPQGPPPQG--GSKSRSARSPPGKPQGPP 370
Score = 45.8 bits (107), Expect = 7e-05
Identities = 48/184 (26%), Positives = 60/184 (32%), Gaps = 21/184 (11%)
Query: 23 RPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEW 82
+P PP G P P GP ++ PP G P
Sbjct: 241 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-------------- 286
Query: 83 TTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLL 142
P G S + G P G P G+ P P P PP P P GP
Sbjct: 287 --PPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP-PQGGNKPQGPP--- 340
Query: 143 PYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEP 202
P P+GP P+ G + + + PP +EG P PPPP P +P
Sbjct: 341 PPGKPQGPPPQG-GSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQP 399
Query: 203 TLPP 206
PP
Sbjct: 400 QGPP 403
Score = 38.1 bits (87), Expect = 0.015
Identities = 96/410 (23%), Positives = 119/410 (29%), Gaps = 97/410 (23%)
Query: 24 PPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQM----APCGCFFDPRIYR 79
PP G P G P Q GP QG PP G + +P G P
Sbjct: 73 PPPGKPQGP-----PPQGGNKPQGPPPPGKPQGP--PPQGDKSRSPRSPPGKPQGP---- 121
Query: 80 IEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQ 139
P G + G P G P G+ P P PG P P Q
Sbjct: 122 -----PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP----PGKPQGPPPQGDNKSRS 172
Query: 140 FLLPYFPPEGPGPEALGFVGDAGPAAFVELPL-PPLEEGPAPLPPPPPKENK-PPPVLIT 197
P P+GP P+ G GP P PP + G P PPPP + + PPP
Sbjct: 173 SRSPPGKPQGPPPQ--GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDN 230
Query: 198 LPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPLYPPGLSELK-VAEV 256
PP G GP P + QG PG P PP K
Sbjct: 231 KSQSARSPP----------GKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGNKPQGPP 278
Query: 257 KEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSS 316
G G K+ + + P K G ++P+G P P
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQ-------GGNQPQGPPPPPGKPQGPPPQ 331
Query: 317 GGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPA 376
GGN + PP PG P P
Sbjct: 332 GGNK----------------------------------------PQGPPPPGKP--QGPP 349
Query: 377 PILSGKRKASTAKKGKP-------GRKARQPAGPASATPPGPREDLGATP 419
P K +++ + GKP G + P PA P P+ P
Sbjct: 350 PQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQP 399
>gi|194353976 transcription factor AP-2 epsilon (activating enhancer
binding protein 2 epsilon) [Homo sapiens]
Length = 442
Score = 51.2 bits (121), Expect = 2e-06
Identities = 66/229 (28%), Positives = 87/229 (37%), Gaps = 38/229 (16%)
Query: 102 PAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPE-ALGFVGD 160
P G+ +A G L P PP H A +F PYFPP P P G D
Sbjct: 12 PDGLGAAAGGARLSSLPQAAYGPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQAPD 71
Query: 161 AGPAAFVELPLPPLEEGPAPLPPPPP------------KENKPPPVLITLPAEP--TLPP 206
A AAF L P G APL P P + ++ PP L+ PA P
Sbjct: 72 AA-AAFPHLAGDPY-GGLAPLAQPQPPQAAWAAPRAAARAHEEPPGLLAPPARALGLDPR 129
Query: 207 DAYSHLQGHLGH--FPGPEPLAFPVKELQGSGARPGV----PLYPPGLSELKVAEVKEGA 260
Y+ L H G LA L G A PG+ + PG+S L + +K
Sbjct: 130 RDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLLDQSVIK--- 186
Query: 261 LLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPG 309
K P ++A +L L +D++ + G + P C VPG
Sbjct: 187 -------KVPIPSKASSLSALSLAKDSL-----VGGITNPGEVFCSVPG 223
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 51.2 bits (121), Expect = 2e-06
Identities = 58/203 (28%), Positives = 75/203 (36%), Gaps = 26/203 (12%)
Query: 118 PYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPG--PEALGFVGDAGPAAFVELP---LP 172
P + PGLPP P P G L+P PP PG P G P + P +P
Sbjct: 140 PPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIP 199
Query: 173 PLEEG-PAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPV-K 230
PL G P +PPP P+ PP A+ P + P P+P PV K
Sbjct: 200 PLMPGMPPGMPPPVPRPGIPP----MTQAQAVSAPGILNRPPAPTATVPAPQP---PVTK 252
Query: 231 ELQGSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKL 290
L S + G P ++ A +L + KA P TA+A A + D L
Sbjct: 253 PLFPSAGQMGTP-----VTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPL 307
Query: 291 FDCLPGASEPEGTLCEVPGPALP 313
+ T E P P P
Sbjct: 308 -------NSTPATTTEPPKPTFP 323
Score = 29.3 bits (64), Expect = 7.0
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 16/77 (20%)
Query: 125 LPPYPHYQQAPGGPQFLLPYFPPEGP-GPEALGFVGDAGPAAFVELPLPPLEEGPAPLP- 182
+PP P Q G + P PP G G G G ++ +PP +GP +P
Sbjct: 406 MPPQPGIPQQQG----MRPPMPPHGQYGGHHQGMPG------YLPGAMPPYGQGPPMVPP 455
Query: 183 ----PPPPKENKPPPVL 195
PP P PPV+
Sbjct: 456 YQGGPPRPPMGMRPPVM 472
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 50.8 bits (120), Expect = 2e-06
Identities = 106/439 (24%), Positives = 137/439 (31%), Gaps = 53/439 (12%)
Query: 13 PARAPKQYLCRPPKGPPNGKVLVASPKQA-PRLGLGPSGSSCSQGT---RLPPTGFQMAP 68
P P PP+ PP L + P Q P L P + Q LPP AP
Sbjct: 580 PPETPSSIATPPPQAPP---ALASPPLQGLPSPPLSPLATPPPQAPPXLALPPL---QAP 633
Query: 69 CGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPY 128
P + + +P + L + P P + P + PP
Sbjct: 634 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP- 692
Query: 129 PHYQQAPGGPQFLLP--YFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAP--LPPP 184
QAP P P PP P + P A L PPL+ P+P PP
Sbjct: 693 ---SQAP--PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPM 747
Query: 185 PPKENKPPPVLITLPAEP-TLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPL 243
P PP V L A P +PP + L + P P A P A P P
Sbjct: 748 SPSATPPPRVPPLLAAPPLQVPPSPPASLP--MSPLAKPPPQAPPALATPPLQALPSPPA 805
Query: 244 YPPGLSELKVAEVKEGALLGAGKAKAPKTARA--LALPDKVLLEDAMKLFDCLP------ 295
PG + + + L +AP A L +P ++ P
Sbjct: 806 SFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDT 865
Query: 296 GASEPEGTLCEVPGPALPDSSGGNS--------ADDIRSLCLPEELLSFDYSVPE---IL 344
S P TL PGP P S +S + PEEL +D S PE
Sbjct: 866 SVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD-SGPEGGAAA 924
Query: 345 DTVSNVDYFFNFKALDEEQPPHP----GPPATNTPAPILSGKRKASTAKKGKPGRKARQP 400
+ + A P P G P P P +G A +
Sbjct: 925 SPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGL------CTIYET 978
Query: 401 AGPASATPPGPREDLGATP 419
GP SATP D G +P
Sbjct: 979 EGPESATPAPGALDPGPSP 997
Score = 44.3 bits (103), Expect = 2e-04
Identities = 41/127 (32%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 87 LGQSALYKLAASSGGPA--GVPSAPGSYLLEPQPY----LKAPGLPPYPHYQQAPG-GPQ 139
L SA + + GP+ G P AP ++ +P+P L+ P + P P AP GP
Sbjct: 242 LSSSATPLSSPARSGPSARGTPRAP-AHPSQPKPKGLQALRPPQVTP-PRKDAAPALGPL 299
Query: 140 FLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLP 199
P P G +A A + LPP PLP PP + PP L TLP
Sbjct: 300 SSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPS-LQTLP 358
Query: 200 AEPTLPP 206
+ P PP
Sbjct: 359 SPPATPP 365
Score = 40.4 bits (93), Expect = 0.003
Identities = 66/260 (25%), Positives = 85/260 (32%), Gaps = 25/260 (9%)
Query: 1 MSPKDKLCVIHHPARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLP 60
MSP+ + P+R PP PP L + L P+ S S +
Sbjct: 432 MSPRQTQASLTSPSRPAST----PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIH 487
Query: 61 PTGFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYL--LEPQP 118
P Q P+ P L + + PA + + P L L P P
Sbjct: 488 P--LQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPP 545
Query: 119 YLKAPGLPPYPHYQQAPGGPQFLL--PYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEE 176
A PH + P L P P P PE + P A L PPL+
Sbjct: 546 LQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQG 605
Query: 177 GPAP------LPPP--------PPKENKP-PPVLITLPAEPTLPPDAYSHLQGHLGHFPG 221
P+P PPP PP + P PP L T P A + L HL P
Sbjct: 606 LPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF 665
Query: 222 PEPLAFPVKELQGSGARPGV 241
P + PV+ A P V
Sbjct: 666 SPPPSPPVQAPFSPPASPPV 685
Score = 32.3 bits (72), Expect = 0.83
Identities = 93/394 (23%), Positives = 127/394 (32%), Gaps = 57/394 (14%)
Query: 36 ASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEWTTPDLGQSALYKL 95
A+P +P SG S R P Q P G + R TP + A L
Sbjct: 246 ATPLSSP----ARSGPSARGTPRAPAHPSQPKPKGL----QALRPPQVTPPR-KDAAPAL 296
Query: 96 AASSGGPAGVPSAPGSYLLE-PQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEA 154
S P PS G+ P P A LP P P P P P P A
Sbjct: 297 GPLSSSPLATPSPSGTKARPVPPPDNAATPLPA-----TLPPSPPLATP-LPLAPPSPSA 350
Query: 155 LGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQG 214
P + LP PP P PP PP + P+ T+PP H
Sbjct: 351 --------PPSLQTLPSPP----ATPPSQAPPSMTTPP--MQAPPSLQTIPPIQVPHSLT 396
Query: 215 HLGHFPGPEPLAFPVKELQGSGARPGVPLYPPGLSELKVAEVKEGALLGAGKAKA----- 269
P PLA + LQ + + G P S L ++ + A L + A
Sbjct: 397 SPSLQAPPSPLA--LSSLQATTSL-GSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPD 453
Query: 270 -PKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLC 328
P L+LP L+ ++ P S L P AL + + + SL
Sbjct: 454 SPPLQAPLSLPASPPLQTSLS-----PAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLI 508
Query: 329 LPEELLSFDYSVPEILDTVSNVDY--FFNFKALDEE---------QPPHPGPPATNTPAP 377
+P + P + +++ N +L PH P P P
Sbjct: 509 MPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCP 568
Query: 378 ILSGKRKASTAKKGKPGRKARQP--AGPASATPP 409
+ + +T P A P A PA A+PP
Sbjct: 569 LQAPPSPLTTPPPETPSSIATPPPQAPPALASPP 602
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 50.8 bits (120), Expect = 2e-06
Identities = 71/249 (28%), Positives = 88/249 (35%), Gaps = 54/249 (21%)
Query: 12 HP-ARAPKQYLCRP-PKGP-----PNGKVLV--ASPKQAPRLGLGPSGSSCSQGTR---- 58
HP A +P RP P GP P+ +V A P P S SS SQG+
Sbjct: 528 HPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSH 587
Query: 59 -LPPTGFQMAPCGCFFDPRIYRIEWTTPDL-----GQSALYKLAASSGGPAGVPSAP--G 110
P G Q AP P + T + A YK A+ G P AP G
Sbjct: 588 PSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPG 647
Query: 111 SYLLEPQPYLKAPGLPPY------PHYQ--QAPGGPQFLLPYFPPEGPGPEALGFVGDAG 162
+Y P K PG PP P Y+ P GP P P GPGP + AG
Sbjct: 648 AYKTATPPGYK-PGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGP-----LPPAG 701
Query: 163 PAAFVELPLPPLEEGPAP-------------------LPPPPPKENKPPPVLITLPAEPT 203
P+ LP PP P P PP + PPP ++ +P+ +
Sbjct: 702 PSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVDVPSHAS 761
Query: 204 LPPDAYSHL 212
HL
Sbjct: 762 QSARFNKHL 770
Score = 41.2 bits (95), Expect = 0.002
Identities = 77/299 (25%), Positives = 107/299 (35%), Gaps = 44/299 (14%)
Query: 123 PGLPPYPHYQQAPGGPQFLLPYFPPEGP-GPEALGFVGDAGPAAFVELPLPPLEEGPAPL 181
PG PP PH Q PGG +L PP GP G A VG P P+ +
Sbjct: 210 PGAPP-PHPQLYPGGTGGVLS-GPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGA 267
Query: 182 PPPPPKENKPPPVLI---TLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGAR 238
PP KPP + LP+ P PP + H+ +L P PL G GA+
Sbjct: 268 SGAPP--TKPPTTPVGGGNLPSAP--PPANFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323
Query: 239 PGVPLYPP-------GLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLF 291
P +P + P G+ L K L + + P ++ A A P +
Sbjct: 324 P-LPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMR---------- 372
Query: 292 DCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILD-TVSNV 350
P +S + A SS +S+ + L S+ +S P +VSN
Sbjct: 373 --FPYSSSSSSS-------AAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQ 423
Query: 351 DYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKKG--KPGRKARQPAGPASAT 407
+ +L + GPP P P S A G P A+ A P +T
Sbjct: 424 PPKYTQPSLPSQAVWSQGPP----PPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVST 478
Score = 35.0 bits (79), Expect = 0.13
Identities = 72/346 (20%), Positives = 112/346 (32%), Gaps = 70/346 (20%)
Query: 93 YKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGG-------PQFLLPYF 145
+ ++SS A S+ S P+ + LP YPH P P++ P
Sbjct: 373 FPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSL 432
Query: 146 PPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLIT-------L 198
P +A+ G P + L L P P PP ++ P + T
Sbjct: 433 P-----SQAVWSQGPPPPPPYGRL-LANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQ 486
Query: 199 PAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPL-----------YPPG 247
+ Q H G+ P P AFP L+G + P YPPG
Sbjct: 487 QQQQQQQQQQQQQQQQHHGNSGPPPPGAFP-HPLEGGSSHHAHPYAMSPSLGSLRPYPPG 545
Query: 248 LSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTL-CE 306
+ L + + AG P ++ + + +S +G+ C
Sbjct: 546 PAHLPPPH-SQVSYSQAGPNGPPVSSSSNS------------------SSSTSQGSYPCS 586
Query: 307 VPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPPH 366
P P+ + ++ LS ++ TV++ + PP
Sbjct: 587 HPSPSQGPQGAPYPFPPVPTVTTSSATLS------TVIATVASSPAGYK-----TASPPG 635
Query: 367 PGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPR 412
P P P+P G K +T PG K P + TPPG R
Sbjct: 636 PPPYGKRAPSP---GAYKTAT----PPGYKPGSPPSFRTGTPPGYR 674
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 50.8 bits (120), Expect = 2e-06
Identities = 71/249 (28%), Positives = 88/249 (35%), Gaps = 54/249 (21%)
Query: 12 HP-ARAPKQYLCRP-PKGP-----PNGKVLV--ASPKQAPRLGLGPSGSSCSQGTR---- 58
HP A +P RP P GP P+ +V A P P S SS SQG+
Sbjct: 528 HPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSH 587
Query: 59 -LPPTGFQMAPCGCFFDPRIYRIEWTTPDL-----GQSALYKLAASSGGPAGVPSAP--G 110
P G Q AP P + T + A YK A+ G P AP G
Sbjct: 588 PSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPG 647
Query: 111 SYLLEPQPYLKAPGLPPY------PHYQ--QAPGGPQFLLPYFPPEGPGPEALGFVGDAG 162
+Y P K PG PP P Y+ P GP P P GPGP + AG
Sbjct: 648 AYKTATPPGYK-PGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGP-----LPPAG 701
Query: 163 PAAFVELPLPPLEEGPAP-------------------LPPPPPKENKPPPVLITLPAEPT 203
P+ LP PP P P PP + PPP ++ +P+ +
Sbjct: 702 PSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVDVPSHAS 761
Query: 204 LPPDAYSHL 212
HL
Sbjct: 762 QSARFNKHL 770
Score = 41.2 bits (95), Expect = 0.002
Identities = 77/299 (25%), Positives = 107/299 (35%), Gaps = 44/299 (14%)
Query: 123 PGLPPYPHYQQAPGGPQFLLPYFPPEGP-GPEALGFVGDAGPAAFVELPLPPLEEGPAPL 181
PG PP PH Q PGG +L PP GP G A VG P P+ +
Sbjct: 210 PGAPP-PHPQLYPGGTGGVLS-GPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGA 267
Query: 182 PPPPPKENKPPPVLI---TLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGAR 238
PP KPP + LP+ P PP + H+ +L P PL G GA+
Sbjct: 268 SGAPP--TKPPTTPVGGGNLPSAP--PPANFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323
Query: 239 PGVPLYPP-------GLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLF 291
P +P + P G+ L K L + + P ++ A A P +
Sbjct: 324 P-LPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMR---------- 372
Query: 292 DCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILD-TVSNV 350
P +S + A SS +S+ + L S+ +S P +VSN
Sbjct: 373 --FPYSSSSSSS-------AAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQ 423
Query: 351 DYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKKG--KPGRKARQPAGPASAT 407
+ +L + GPP P P S A G P A+ A P +T
Sbjct: 424 PPKYTQPSLPSQAVWSQGPP----PPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVST 478
Score = 35.0 bits (79), Expect = 0.13
Identities = 72/346 (20%), Positives = 112/346 (32%), Gaps = 70/346 (20%)
Query: 93 YKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGG-------PQFLLPYF 145
+ ++SS A S+ S P+ + LP YPH P P++ P
Sbjct: 373 FPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSL 432
Query: 146 PPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLIT-------L 198
P +A+ G P + L L P P PP ++ P + T
Sbjct: 433 P-----SQAVWSQGPPPPPPYGRL-LANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQ 486
Query: 199 PAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGVPL-----------YPPG 247
+ Q H G+ P P AFP L+G + P YPPG
Sbjct: 487 QQQQQQQQQQQQQQQQHHGNSGPPPPGAFP-HPLEGGSSHHAHPYAMSPSLGSLRPYPPG 545
Query: 248 LSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTL-CE 306
+ L + + AG P ++ + + +S +G+ C
Sbjct: 546 PAHLPPPH-SQVSYSQAGPNGPPVSSSSNS------------------SSSTSQGSYPCS 586
Query: 307 VPGPALPDSSGGNSADDIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALDEEQPPH 366
P P+ + ++ LS ++ TV++ + PP
Sbjct: 587 HPSPSQGPQGAPYPFPPVPTVTTSSATLS------TVIATVASSPAGYK-----TASPPG 635
Query: 367 PGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPR 412
P P P+P G K +T PG K P + TPPG R
Sbjct: 636 PPPYGKRAPSP---GAYKTAT----PPGYKPGSPPSFRTGTPPGYR 674
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 50.4 bits (119), Expect = 3e-06
Identities = 71/257 (27%), Positives = 92/257 (35%), Gaps = 35/257 (13%)
Query: 26 KGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFFDPRIYRIEWTTP 85
KG P L P + G+G G G P G + P ++
Sbjct: 275 KGIPGMVGLPGPPGRKGESGIGAKGEKGIPGFPGP-----RGDPGSYGSPGFPGLKGELG 329
Query: 86 DLGQSALYKLAASSGGPA--GVPSAPGSYLLEPQPYLKAPGLPPYP-HYQQA----PGGP 138
+G L+ L G P G P PG + P P PG P +P Y + P GP
Sbjct: 330 LVGDPGLFGLIGPKGDPGNRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGP 389
Query: 139 QFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEG-PAPLPPPPPKENKP-PPVLI 196
LL PG G +G GP F LP P E G P P K KP P L
Sbjct: 390 PGLLGR-----PGEACAGMIGPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLP 444
Query: 197 TLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGAR------------PGVPLY 244
P LP + + +G+ PGP+ + V G G + PG P+
Sbjct: 445 GAPGLQGLPGSSVIYCS--VGN-PGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPG-PMG 500
Query: 245 PPGLSELKVAEVKEGAL 261
PPG L + +G L
Sbjct: 501 PPGPPGLPGRQGSKGDL 517
Score = 50.4 bits (119), Expect = 3e-06
Identities = 47/145 (32%), Positives = 55/145 (37%), Gaps = 10/145 (6%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPP--EGP-GPEALGF 157
GP G P PGS+ + K PP H PGG F P PP GP GP LGF
Sbjct: 575 GPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGF 634
Query: 158 VGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLG 217
G G +P P GP L K K + + P + G G
Sbjct: 635 PGPPGERGHPGVPGHPGVRGPDGL-----KGQKGDTISCNVTYPGRHGPPGFDGPPGPKG 689
Query: 218 HFPGPEPLAFPVKELQGSGARPGVP 242
FPGP+ A + G RPG P
Sbjct: 690 -FPGPQG-APGLSGSDGHKGRPGTP 712
Score = 40.0 bits (92), Expect = 0.004
Identities = 49/154 (31%), Positives = 59/154 (38%), Gaps = 22/154 (14%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVGD 160
G G+P PG PG P P Y+ PG P PGP+ G G
Sbjct: 1292 GDCGLPGPPGP-----------PGPPGPPGYKGFPGCDGKDGQKGPVGFPGPQ--GPHGF 1338
Query: 161 AGPAAFVELPLPPLEEGPAPLP-----PPPPKENKPPPVLITLPAEPTL-PPDAYSHLQG 214
GP LP PP +GP LP P PP + P + LP P + P+ L G
Sbjct: 1339 PGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGPEGAMGLPG 1398
Query: 215 HLGHFPGPEPLAFP-VKELQGSGARPGVPLYPPG 247
G GP P + +G PG P PPG
Sbjct: 1399 MRGP-SGPGCKGEPGLDGRRGVDGVPGSP-GPPG 1430
Score = 39.3 bits (90), Expect = 0.007
Identities = 37/108 (34%), Positives = 40/108 (37%), Gaps = 16/108 (14%)
Query: 101 GPAGVPSAPGSYLLEPQPYLKA-PGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEAL---- 155
G GVP PG P + PGLP YP APGG PP G + L
Sbjct: 816 GFPGVPGPPGHSCERGAPGIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLP 875
Query: 156 ---------GFVGDAGPAAFVELPLPPLEEGPAPLP--PPPPKENKPP 192
G G GP LP PP +GP LP P P E P
Sbjct: 876 GRPGAHGPPGLPGIPGPFGDDGLPGPPGPKGPRGLPGFPGFPGERGKP 923
Score = 30.0 bits (66), Expect = 4.1
Identities = 48/178 (26%), Positives = 58/178 (32%), Gaps = 30/178 (16%)
Query: 99 SGGPAGVPSAPGSYLLEPQPYLKA----------PGLPPYPHYQQAPGGPQFLLPYFPPE 148
S GP G P G L QP PG+P P + G P +
Sbjct: 1125 SSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKG 1184
Query: 149 GPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLP---PPPPKENK-----------PPPV 194
G + + D GP V +P E G P PP P+ K P P
Sbjct: 1185 QKGTKGASGLHDVGPPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGPPGPA 1244
Query: 195 LITLPAEPTLPPDAYSHLQGHLG-----HFPGPEPLAFPVKELQGSGARPGVPLYPPG 247
T A +P QG G PGP L V L+G G+P PPG
Sbjct: 1245 GATGRAPKDIPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLP-GPPG 1301
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 50.4 bits (119), Expect = 3e-06
Identities = 66/250 (26%), Positives = 81/250 (32%), Gaps = 43/250 (17%)
Query: 14 ARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFF 73
+R+P+ +P PP G P P GP ++ PP G P
Sbjct: 87 SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP----- 141
Query: 74 DPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQ 133
P G + S P G P P PQ + G PP P Q
Sbjct: 142 -----------PPQGDKS-----RSPRSPPGKPQGP-----PPQGGNQPQGPPPPPGKPQ 180
Query: 134 AP---GG--PQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKE 188
P GG PQ P P+GP P+ P + P P P PPPP K
Sbjct: 181 GPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKP 240
Query: 189 NKPPPVLITLPAEPTLP-----PDAYSHLQGHLGHFPGPEPLAFPVKE---LQG----SG 236
PPP P P P P A + P +P P +E QG +G
Sbjct: 241 QGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAG 300
Query: 237 ARPGVPLYPP 246
P P PP
Sbjct: 301 GNPQQPQAPP 310
Score = 45.1 bits (105), Expect = 1e-04
Identities = 45/148 (30%), Positives = 54/148 (36%), Gaps = 20/148 (13%)
Query: 100 GGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQAPGGPQFLLPYFPPEGPGPEALGFVG 159
G P G P G+ P P K G PP ++P P P+GP P+ G
Sbjct: 55 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP-----GKPQGPPPQ--GGNQ 107
Query: 160 DAGPAAFVELPL-PPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQGHLGH 218
GP P PP + G P PPPP + + PP P PP G
Sbjct: 108 PQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPP----------GK 157
Query: 219 FPGPEPLAFPVKELQGSGARPGVPLYPP 246
GP P + QG PG P PP
Sbjct: 158 PQGPPPQG--GNQPQGPPPPPGKPQGPP 183
Score = 45.1 bits (105), Expect = 1e-04
Identities = 53/198 (26%), Positives = 66/198 (33%), Gaps = 32/198 (16%)
Query: 14 ARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCFF 73
+R+P+ +P PP G P P GP + PP G P
Sbjct: 148 SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGP----- 202
Query: 74 DPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPYPHYQQ 133
P G + SS P G P P PQ + G PP P Q
Sbjct: 203 -----------PPQGDKS-----RSSQSPPGKPQGP-----PPQGGNQPQGPPPPPGKPQ 241
Query: 134 AP---GG--PQFLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKE 188
P GG PQ P P+GP P G + + + PP +EG P PPPP
Sbjct: 242 GPPPQGGNKPQGPPPPGKPQGP-PAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAG 300
Query: 189 NKPPPVLITLPAEPTLPP 206
P +P PP
Sbjct: 301 GNPQQPQAPPAGQPQGPP 318
Score = 29.3 bits (64), Expect = 7.0
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 362 EQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPREDLGATP 419
++P P PP P K ++S + GKP Q PP P + G P
Sbjct: 188 KKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 245
>gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]
Length = 494
Score = 50.4 bits (119), Expect = 3e-06
Identities = 63/238 (26%), Positives = 86/238 (36%), Gaps = 47/238 (19%)
Query: 85 PDLGQSALYKLAASSGGPAGVPSA-PGSYLLEPQPYLKAPGLPPYPHYQ----QAPGGPQ 139
P + Q L + + G P G+P PG L P PG+PP H+Q Q+ G
Sbjct: 140 PPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGLHHQRKYTQSFCGEN 199
Query: 140 FLLPY--FPPEGPGPEALGFVGDAGPAAFVELPLPPLEEG-PAPLPPPPPKENKPPPVLI 196
++P P GPG +PPL G P +PPP P+ PP
Sbjct: 200 IMMPMGGMMPPGPG-------------------IPPLMPGMPPGMPPPVPRPGIPP---- 236
Query: 197 TLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPV-KELQGSGARPGVPLYPPGLSELKVAE 255
A+ P + P P+P PV K L S + G P ++ A
Sbjct: 237 MTQAQAVSAPGILNRPPAPTATVPAPQP---PVTKPLFPSAGQMGTP-----VTSSSTAS 288
Query: 256 VKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALP 313
+L + KA P TA+A A + D L + T E P P P
Sbjct: 289 SNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPL-------NSTPATTTEPPKPTFP 339
Score = 29.3 bits (64), Expect = 7.0
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 16/77 (20%)
Query: 125 LPPYPHYQQAPGGPQFLLPYFPPEGP-GPEALGFVGDAGPAAFVELPLPPLEEGPAPLP- 182
+PP P Q G + P PP G G G G ++ +PP +GP +P
Sbjct: 422 MPPQPGIPQQQG----MRPPMPPHGQYGGHHQGMPG------YLPGAMPPYGQGPPMVPP 471
Query: 183 ----PPPPKENKPPPVL 195
PP P PPV+
Sbjct: 472 YQGGPPRPPMGMRPPVM 488
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 50.1 bits (118), Expect = 4e-06
Identities = 59/226 (26%), Positives = 79/226 (34%), Gaps = 34/226 (15%)
Query: 13 PARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCF 72
PA ++ PP P + K P L GPS S + PP ++
Sbjct: 366 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLS-GPSPFSMNANLPPPPALKPLSSLSTH 424
Query: 73 FDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAP-GL------ 125
P + P L + SS PA P S L P P P GL
Sbjct: 425 HPPSAH-----PPPLQLMPQSQPLPSS--PAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ 477
Query: 126 PPYPHYQQAPGGPQFLLP------YFPPEGPG----PEALGFVGDAG--------PAAFV 167
PP+ + PGGP + P PP GPG P G G P V
Sbjct: 478 PPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTV 537
Query: 168 ELPLPPLEEGPAP-LPPPPPKENKPPPVLITLPAEPTLPPDAYSHL 212
++ L++ P PPPPP+ P P ++ P+ + Y HL
Sbjct: 538 QIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHL 583
Score = 48.1 bits (113), Expect = 1e-05
Identities = 83/317 (26%), Positives = 109/317 (34%), Gaps = 71/317 (22%)
Query: 101 GPAGVPSAP-------------GSYLLEPQPYLKAPG------LPPYPHYQQAPGG--PQ 139
G AG PSAP G + L+ P L+ PG LPP QAP G P
Sbjct: 277 GSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPA 336
Query: 140 FLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPP---------PKENK 190
P+ + P ++ P E PLPP + PPP P+ +K
Sbjct: 337 AAYPHTSLQLPASQS-ALQSQQPPR---EQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 392
Query: 191 PPPVL---------ITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGV 241
PP L LP P L P S L H H P P P++ + S P
Sbjct: 393 HPPHLSGPSPFSMNANLPPPPALKP--LSSLSTH--HPPSAHPP--PLQLMPQSQPLPSS 446
Query: 242 PLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPE 301
P PPGL+ + L A P T P + +PG P
Sbjct: 447 PAQPPGLT--------QSQNLPPPPASHPPTGLHQVAPQPPFAQHPF-----VPGGPPPI 493
Query: 302 GTLCEVPGPALPDSSGGNSAD-DIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALD 360
T P + P + G SA ++ S P L TV +ALD
Sbjct: 494 -TPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCP--LPTVQ-----IKEEALD 545
Query: 361 EEQPPHPGPPATNTPAP 377
+ + P PP +P+P
Sbjct: 546 DAEEPESPPPPPRSPSP 562
Score = 42.4 bits (98), Expect = 8e-04
Identities = 84/322 (26%), Positives = 109/322 (33%), Gaps = 55/322 (17%)
Query: 97 ASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPY--PHYQQAPGGPQFLLPYFPPEGPGPEA 154
A S P G P P P P A +PP P QAP PQ P P P
Sbjct: 196 APSSAPPGTPQLP-----TPGPTPSATAVPPQGSPTASQAPNQPQ------APTAPVPHT 244
Query: 155 LGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQG 214
+ A PA + P P+P PPP P + P L +P+ P A L G
Sbjct: 245 --HIQQA-PALHPQRP-------PSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 294
Query: 215 HLGHFPGPEPL-AFPVKELQGSGARPGVPLYPPGLSELKVAEVKEG-ALLGAGKAKA-PK 271
PGP L A P+ + PG P P GL + +G A LG A A P
Sbjct: 295 Q--GPPGPHSLQAGPLLQ------HPGPP-QPFGLP----PQASQGQAPLGTSPAAAYPH 341
Query: 272 TARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPE 331
T+ L L LP A + P +P + L P
Sbjct: 342 TSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 401
Query: 332 EL-LSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKK 390
++ + P L +S +L PP PP P ++ + ++
Sbjct: 402 PFSMNANLPPPPALKPLS---------SLSTHHPPSAHPP----PLQLMPQSQPLPSSPA 448
Query: 391 GKPGRKARQ--PAGPASATPPG 410
PG Q P PAS P G
Sbjct: 449 QPPGLTQSQNLPPPPASHPPTG 470
Score = 31.2 bits (69), Expect = 1.8
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 358 ALDEEQPPHPGPPATNTP----APILSGKRKASTAKKGKPGRKARQPAGPAS--ATP--- 408
AL ++PP P PP +P P+ + S +P + P GP S A P
Sbjct: 251 ALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQ 310
Query: 409 -PGPREDLGATP 419
PGP + G P
Sbjct: 311 HPGPPQPFGLPP 322
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 50.1 bits (118), Expect = 4e-06
Identities = 59/226 (26%), Positives = 79/226 (34%), Gaps = 34/226 (15%)
Query: 13 PARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCF 72
PA ++ PP P + K P L GPS S + PP ++
Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLS-GPSPFSMNANLPPPPALKPLSSLSTH 978
Query: 73 FDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAP-GL------ 125
P + P L + SS PA P S L P P P GL
Sbjct: 979 HPPSAH-----PPPLQLMPQSQPLPSS--PAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ 1031
Query: 126 PPYPHYQQAPGGPQFLLP------YFPPEGPG----PEALGFVGDAG--------PAAFV 167
PP+ + PGGP + P PP GPG P G G P V
Sbjct: 1032 PPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTV 1091
Query: 168 ELPLPPLEEGPAP-LPPPPPKENKPPPVLITLPAEPTLPPDAYSHL 212
++ L++ P PPPPP+ P P ++ P+ + Y HL
Sbjct: 1092 QIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHL 1137
Score = 48.1 bits (113), Expect = 1e-05
Identities = 83/317 (26%), Positives = 109/317 (34%), Gaps = 71/317 (22%)
Query: 101 GPAGVPSAP-------------GSYLLEPQPYLKAPG------LPPYPHYQQAPGG--PQ 139
G AG PSAP G + L+ P L+ PG LPP QAP G P
Sbjct: 831 GSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPA 890
Query: 140 FLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPP---------PKENK 190
P+ + P ++ P E PLPP + PPP P+ +K
Sbjct: 891 AAYPHTSLQLPASQS-ALQSQQPPR---EQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 946
Query: 191 PPPVL---------ITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGV 241
PP L LP P L P S L H H P P P++ + S P
Sbjct: 947 HPPHLSGPSPFSMNANLPPPPALKP--LSSLSTH--HPPSAHPP--PLQLMPQSQPLPSS 1000
Query: 242 PLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPE 301
P PPGL+ + L A P T P + +PG P
Sbjct: 1001 PAQPPGLT--------QSQNLPPPPASHPPTGLHQVAPQPPFAQHPF-----VPGGPPPI 1047
Query: 302 GTLCEVPGPALPDSSGGNSAD-DIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALD 360
T P + P + G SA ++ S P L TV +ALD
Sbjct: 1048 -TPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCP--LPTVQ-----IKEEALD 1099
Query: 361 EEQPPHPGPPATNTPAP 377
+ + P PP +P+P
Sbjct: 1100 DAEEPESPPPPPRSPSP 1116
Score = 42.4 bits (98), Expect = 8e-04
Identities = 84/322 (26%), Positives = 109/322 (33%), Gaps = 55/322 (17%)
Query: 97 ASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPY--PHYQQAPGGPQFLLPYFPPEGPGPEA 154
A S P G P P P P A +PP P QAP PQ P P P
Sbjct: 750 APSSAPPGTPQLP-----TPGPTPSATAVPPQGSPTASQAPNQPQ------APTAPVPHT 798
Query: 155 LGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQG 214
+ A PA + P P+P PPP P + P L +P+ P A L G
Sbjct: 799 --HIQQA-PALHPQRP-------PSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 848
Query: 215 HLGHFPGPEPL-AFPVKELQGSGARPGVPLYPPGLSELKVAEVKEG-ALLGAGKAKA-PK 271
PGP L A P+ + PG P P GL + +G A LG A A P
Sbjct: 849 Q--GPPGPHSLQAGPLLQ------HPGPP-QPFGLP----PQASQGQAPLGTSPAAAYPH 895
Query: 272 TARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPE 331
T+ L L LP A + P +P + L P
Sbjct: 896 TSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 955
Query: 332 EL-LSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKK 390
++ + P L +S +L PP PP P ++ + ++
Sbjct: 956 PFSMNANLPPPPALKPLS---------SLSTHHPPSAHPP----PLQLMPQSQPLPSSPA 1002
Query: 391 GKPGRKARQ--PAGPASATPPG 410
PG Q P PAS P G
Sbjct: 1003 QPPGLTQSQNLPPPPASHPPTG 1024
Score = 31.2 bits (69), Expect = 1.8
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 358 ALDEEQPPHPGPPATNTP----APILSGKRKASTAKKGKPGRKARQPAGPAS--ATP--- 408
AL ++PP P PP +P P+ + S +P + P GP S A P
Sbjct: 805 ALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQ 864
Query: 409 -PGPREDLGATP 419
PGP + G P
Sbjct: 865 HPGPPQPFGLPP 876
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 50.1 bits (118), Expect = 4e-06
Identities = 59/226 (26%), Positives = 79/226 (34%), Gaps = 34/226 (15%)
Query: 13 PARAPKQYLCRPPKGPPNGKVLVASPKQAPRLGLGPSGSSCSQGTRLPPTGFQMAPCGCF 72
PA ++ PP P + K P L GPS S + PP ++
Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLS-GPSPFSMNANLPPPPALKPLSSLSTH 978
Query: 73 FDPRIYRIEWTTPDLGQSALYKLAASSGGPAGVPSAPGSYLLEPQPYLKAP-GL------ 125
P + P L + SS PA P S L P P P GL
Sbjct: 979 HPPSAH-----PPPLQLMPQSQPLPSS--PAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ 1031
Query: 126 PPYPHYQQAPGGPQFLLP------YFPPEGPG----PEALGFVGDAG--------PAAFV 167
PP+ + PGGP + P PP GPG P G G P V
Sbjct: 1032 PPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTV 1091
Query: 168 ELPLPPLEEGPAP-LPPPPPKENKPPPVLITLPAEPTLPPDAYSHL 212
++ L++ P PPPPP+ P P ++ P+ + Y HL
Sbjct: 1092 QIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHL 1137
Score = 48.1 bits (113), Expect = 1e-05
Identities = 83/317 (26%), Positives = 109/317 (34%), Gaps = 71/317 (22%)
Query: 101 GPAGVPSAP-------------GSYLLEPQPYLKAPG------LPPYPHYQQAPGG--PQ 139
G AG PSAP G + L+ P L+ PG LPP QAP G P
Sbjct: 831 GSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPA 890
Query: 140 FLLPYFPPEGPGPEALGFVGDAGPAAFVELPLPPLEEGPAPLPPPP---------PKENK 190
P+ + P ++ P E PLPP + PPP P+ +K
Sbjct: 891 AAYPHTSLQLPASQS-ALQSQQPPR---EQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 946
Query: 191 PPPVL---------ITLPAEPTLPPDAYSHLQGHLGHFPGPEPLAFPVKELQGSGARPGV 241
PP L LP P L P S L H H P P P++ + S P
Sbjct: 947 HPPHLSGPSPFSMNANLPPPPALKP--LSSLSTH--HPPSAHPP--PLQLMPQSQPLPSS 1000
Query: 242 PLYPPGLSELKVAEVKEGALLGAGKAKAPKTARALALPDKVLLEDAMKLFDCLPGASEPE 301
P PPGL+ + L A P T P + +PG P
Sbjct: 1001 PAQPPGLT--------QSQNLPPPPASHPPTGLHQVAPQPPFAQHPF-----VPGGPPPI 1047
Query: 302 GTLCEVPGPALPDSSGGNSAD-DIRSLCLPEELLSFDYSVPEILDTVSNVDYFFNFKALD 360
T P + P + G SA ++ S P L TV +ALD
Sbjct: 1048 -TPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCP--LPTVQ-----IKEEALD 1099
Query: 361 EEQPPHPGPPATNTPAP 377
+ + P PP +P+P
Sbjct: 1100 DAEEPESPPPPPRSPSP 1116
Score = 42.4 bits (98), Expect = 8e-04
Identities = 84/322 (26%), Positives = 109/322 (33%), Gaps = 55/322 (17%)
Query: 97 ASSGGPAGVPSAPGSYLLEPQPYLKAPGLPPY--PHYQQAPGGPQFLLPYFPPEGPGPEA 154
A S P G P P P P A +PP P QAP PQ P P P
Sbjct: 750 APSSAPPGTPQLP-----TPGPTPSATAVPPQGSPTASQAPNQPQ------APTAPVPHT 798
Query: 155 LGFVGDAGPAAFVELPLPPLEEGPAPLPPPPPKENKPPPVLITLPAEPTLPPDAYSHLQG 214
+ A PA + P P+P PPP P + P L +P+ P A L G
Sbjct: 799 --HIQQA-PALHPQRP-------PSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 848
Query: 215 HLGHFPGPEPL-AFPVKELQGSGARPGVPLYPPGLSELKVAEVKEG-ALLGAGKAKA-PK 271
PGP L A P+ + PG P P GL + +G A LG A A P
Sbjct: 849 Q--GPPGPHSLQAGPLLQ------HPGPP-QPFGLP----PQASQGQAPLGTSPAAAYPH 895
Query: 272 TARALALPDKVLLEDAMKLFDCLPGASEPEGTLCEVPGPALPDSSGGNSADDIRSLCLPE 331
T+ L L LP A + P +P + L P
Sbjct: 896 TSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 955
Query: 332 EL-LSFDYSVPEILDTVSNVDYFFNFKALDEEQPPHPGPPATNTPAPILSGKRKASTAKK 390
++ + P L +S +L PP PP P ++ + ++
Sbjct: 956 PFSMNANLPPPPALKPLS---------SLSTHHPPSAHPP----PLQLMPQSQPLPSSPA 1002
Query: 391 GKPGRKARQ--PAGPASATPPG 410
PG Q P PAS P G
Sbjct: 1003 QPPGLTQSQNLPPPPASHPPTG 1024
Score = 31.2 bits (69), Expect = 1.8
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 358 ALDEEQPPHPGPPATNTP----APILSGKRKASTAKKGKPGRKARQPAGPAS--ATP--- 408
AL ++PP P PP +P P+ + S +P + P GP S A P
Sbjct: 805 ALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQ 864
Query: 409 -PGPREDLGATP 419
PGP + G P
Sbjct: 865 HPGPPQPFGLPP 876
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.139 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,838,571
Number of Sequences: 37866
Number of extensions: 2128223
Number of successful extensions: 21110
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 1080
Number of HSP's that attempted gapping in prelim test: 10150
Number of HSP's gapped (non-prelim): 6843
length of query: 420
length of database: 18,247,518
effective HSP length: 105
effective length of query: 315
effective length of database: 14,271,588
effective search space: 4495550220
effective search space used: 4495550220
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.