Guide to the Human Genome
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Name: PRR22 Sequence: fasta or formatted (420aa) NCBI GI: 23503299
Description:

proline rich 22 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {422aa} proline rich 22 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         43           2
 C cysteine            1.9          8           1
 D aspartate           3.8         16           2
 E glutamate           5.7         24           2
 F phenylalanine       3.3         14           2
 G glycine            10.5         44           2
 H histidine           1.9          8           2
 I isoleucine          1.7          7           1
 K lysine              6.0         25           2
 L leucine            11.4         48           2
 M methionine          0.7          3           1
 N asparagine          1.4          6           1
 P proline            19.0         80           5
 Q glutamine           3.1         13           2
 R arginine            3.1         13           1
 S serine              6.0         25           2
 T threonine           3.3         14           2
 V valine              3.8         16           1
 W tryptophan          0.2          1           1
 Y tyrosine            2.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline rich 22 isoform 2 
PRR22                 0.853   proline rich 22 isoform 1 
DIAPH1                0.036   diaphanous 1 isoform 2 
DIAPH1                0.036   diaphanous 1 isoform 1 
WASF2                 0.036   WAS protein family, member 2 
APBB1IP               0.036   amyloid beta (A4) precursor protein-binding, family ...
COL8A2                0.036   collagen, type VIII, alpha 2 
WBP11                 0.035   WW domain binding protein 11 
COL3A1                0.034   collagen type III alpha 1 preproprotein 
TAF4                  0.034   TBP-associated factor 4 
MAPK1IP1L             0.034   MAPK-interacting and spindle-stabilizing protein [Ho...
COL10A1               0.034   type X collagen alpha 1 precursor 
KDM6B                 0.034   lysine (K)-specific demethylase 6B 
PRR12                 0.033   proline rich 12 
COL4A2                0.031   alpha 2 type IV collagen preproprotein 
KIAA1522              0.031   hypothetical protein LOC57648 
SETD1B                0.031   SET domain containing 1B 
CASKIN1               0.030   CASK interacting protein 1 
PRB2                  0.030   proline-rich protein BstNI subfamily 2 
TFAP2E                0.030   transcription factor AP-2 epsilon (activating enhan...
ZNF207                0.030   zinc finger protein 207 isoform a 
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
ATN1                  0.030   atrophin-1 
ATN1                  0.030   atrophin-1 
COL4A4                0.029   alpha 4 type IV collagen precursor 
PRB1                  0.029   proline-rich protein BstNI subfamily 1 isoform 1 pre...
ZNF207                0.029   zinc finger protein 207 isoform c 
RERE                  0.029   atrophin-1 like protein isoform b 
RERE                  0.029   atrophin-1 like protein isoform a 
RERE                  0.029   atrophin-1 like protein isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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