C1orf172 15518

Name: C1orf172	Sequence: fasta or formatted (398aa)		NCBI GI: 22748787
Description: hypothetical protein LOC126695		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 30 3 C cysteine 3.8 15 2 D aspartate 6.5 26 1 E glutamate 6.5 26 2 F phenylalanine 2.5 10 1 G glycine 6.5 26 1 H histidine 2.5 10 2 I isoleucine 3.5 14 2 K lysine 3.5 14 2 L leucine 6.8 27 2 M methionine 1.5 6 1 N asparagine 0.5 2 1 P proline 11.6 46 3 Q glutamine 3.3 13 2 R arginine 8.0 32 2 S serine 11.8 47 2 T threonine 6.5 26 2 V valine 3.0 12 1 W tryptophan 1.5 6 1 Y tyrosine 2.5 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC126695 PCLO 0.016 piccolo isoform 2 PCLO 0.016 piccolo isoform 1 SYNPO 0.012 synaptopodin isoform A FLJ22184 0.012 PREDICTED: hypothetical protein FLJ22184 LOC100292723 0.012 PREDICTED: hypothetical protein FLJ22184 0.012 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.012 PREDICTED: hypothetical protein LOC80164 SMTN 0.012 smoothelin isoform b SMTN 0.012 smoothelin isoform c HOXA3 0.012 homeobox A3 isoform a HOXA3 0.012 homeobox A3 isoform a LOC100129463 0.012 PREDICTED: hypothetical protein LONRF3 0.012 LON peptidase N-terminal domain and ring finger 3 is... LONRF3 0.012 LON peptidase N-terminal domain and ring finger 3 is... ASAP1 0.011 development and differentiation enhancing factor 1 [... MYC 0.011 myc proto-oncogene protein RBM33 0.011 RNA binding motif protein 33 HES5 0.011 hairy and enhancer of split 5 BRPF1 0.011 bromodomain and PHD finger-containing protein 1 isof... BRPF1 0.011 bromodomain and PHD finger-containing protein 1 isof... KIAA1755 0.010 hypothetical protein LOC85449 RANBP2 0.010 RAN binding protein 2 SIK2 0.010 SNF1-like kinase 2 BAHCC1 0.010 BAH domain and coiled-coil containing 1 FMNL1 0.010 formin-like 1 SMTN 0.010 smoothelin isoform a CPSF6 0.010 cleavage and polyadenylation specific factor 6, 68 ... ACR 0.010 acrosin precursor MUC7 0.009 mucin 7, secreted precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.