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Search of human proteins with 226371775
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226371775 sex hormone-binding globulin isoform 2 precursor
[Homo sapiens]
(384 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226371775 sex hormone-binding globulin isoform 2 precursor [H... 783 0.0
gi|7382460 sex hormone-binding globulin isoform 1 precursor [Hom... 772 0.0
gi|226371777 sex hormone-binding globulin isoform 3 precursor [H... 536 e-152
gi|226371613 sex hormone-binding globulin isoform 4 precursor [H... 438 e-123
gi|192447438 protein S, alpha preproprotein [Homo sapiens] 89 7e-18
gi|221316735 growth arrest-specific 6 isoform 2 [Homo sapiens] 69 7e-12
gi|4557617 growth arrest-specific 6 isoform 1 precursor [Homo sa... 69 7e-12
gi|221316738 growth arrest-specific 6 isoform 3 [Homo sapiens] 66 6e-11
gi|21264602 laminin alpha 5 [Homo sapiens] 49 8e-06
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 48 2e-05
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 47 4e-05
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 47 4e-05
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 47 4e-05
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 45 8e-05
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 45 8e-05
gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 43 5e-04
gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens] 43 5e-04
gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 43 5e-04
gi|54873613 agrin [Homo sapiens] 42 7e-04
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 42 7e-04
gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 42 7e-04
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 42 0.001
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 42 0.001
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 42 0.001
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 42 0.001
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 40 0.004
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 40 0.004
gi|18640734 contactin associated protein-like 5 [Homo sapiens] 40 0.004
gi|33469935 EGF-like, fibronectin type III and laminin G domains... 39 0.010
gi|33469931 EGF-like, fibronectin type III and laminin G domains... 39 0.010
>gi|226371775 sex hormone-binding globulin isoform 2 precursor [Homo
sapiens]
Length = 384
Score = 783 bits (2022), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT 60
MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT
Sbjct: 1 MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT 60
Query: 61 FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA 120
FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA
Sbjct: 61 FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA 120
Query: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS 180
GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS
Sbjct: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS 180
Query: 181 NLRLPAEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDIPQPHAEPWAFSLDLGLKQ 240
NLRLPAEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDIPQPHAEPWAFSLDLGLKQ
Sbjct: 181 NLRLPAEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDIPQPHAEPWAFSLDLGLKQ 240
Query: 241 AAGSGHLLALGTPENPSWLSLHLQDQKVVLSSGSGPGLDLPLVLGLPLQLKLSMSRVVLS 300
AAGSGHLLALGTPENPSWLSLHLQDQKVVLSSGSGPGLDLPLVLGLPLQLKLSMSRVVLS
Sbjct: 241 AAGSGHLLALGTPENPSWLSLHLQDQKVVLSSGSGPGLDLPLVLGLPLQLKLSMSRVVLS 300
Query: 301 QGSKMKALALPPLGLAPLLNLWAKPQGRLFLGALPGEDSSTSFCLNGLWAQGQRLDVDQA 360
QGSKMKALALPPLGLAPLLNLWAKPQGRLFLGALPGEDSSTSFCLNGLWAQGQRLDVDQA
Sbjct: 301 QGSKMKALALPPLGLAPLLNLWAKPQGRLFLGALPGEDSSTSFCLNGLWAQGQRLDVDQA 360
Query: 361 LNRSHEIWTHSCPQSPGNGTDASH 384
LNRSHEIWTHSCPQSPGNGTDASH
Sbjct: 361 LNRSHEIWTHSCPQSPGNGTDASH 384
>gi|7382460 sex hormone-binding globulin isoform 1 precursor [Homo
sapiens]
Length = 402
Score = 772 bits (1993), Expect = 0.0
Identities = 384/402 (95%), Positives = 384/402 (95%), Gaps = 18/402 (4%)
Query: 1 MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT 60
MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT
Sbjct: 1 MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT 60
Query: 61 FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA 120
FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA
Sbjct: 61 FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA 120
Query: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS 180
GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS
Sbjct: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS 180
Query: 181 NLRLP------------------AEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDI 222
NLRLP AEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDI
Sbjct: 181 NLRLPLVPALDGCLRRDSWLDKQAEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDI 240
Query: 223 PQPHAEPWAFSLDLGLKQAAGSGHLLALGTPENPSWLSLHLQDQKVVLSSGSGPGLDLPL 282
PQPHAEPWAFSLDLGLKQAAGSGHLLALGTPENPSWLSLHLQDQKVVLSSGSGPGLDLPL
Sbjct: 241 PQPHAEPWAFSLDLGLKQAAGSGHLLALGTPENPSWLSLHLQDQKVVLSSGSGPGLDLPL 300
Query: 283 VLGLPLQLKLSMSRVVLSQGSKMKALALPPLGLAPLLNLWAKPQGRLFLGALPGEDSSTS 342
VLGLPLQLKLSMSRVVLSQGSKMKALALPPLGLAPLLNLWAKPQGRLFLGALPGEDSSTS
Sbjct: 301 VLGLPLQLKLSMSRVVLSQGSKMKALALPPLGLAPLLNLWAKPQGRLFLGALPGEDSSTS 360
Query: 343 FCLNGLWAQGQRLDVDQALNRSHEIWTHSCPQSPGNGTDASH 384
FCLNGLWAQGQRLDVDQALNRSHEIWTHSCPQSPGNGTDASH
Sbjct: 361 FCLNGLWAQGQRLDVDQALNRSHEIWTHSCPQSPGNGTDASH 402
>gi|226371777 sex hormone-binding globulin isoform 3 precursor [Homo
sapiens]
Length = 293
Score = 536 bits (1380), Expect = e-152
Identities = 267/288 (92%), Positives = 268/288 (93%), Gaps = 18/288 (6%)
Query: 1 MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT 60
MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT
Sbjct: 1 MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT 60
Query: 61 FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA 120
FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA
Sbjct: 61 FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA 120
Query: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS 180
GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS
Sbjct: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS 180
Query: 181 NLRLP------------------AEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDI 222
NLRLP AEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDI
Sbjct: 181 NLRLPLVPALDGCLRRDSWLDKQAEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDI 240
Query: 223 PQPHAEPWAFSLDLGLKQAAGSGHLLALGTPENPSWLSLHLQDQKVVL 270
PQPHAEPWAFSLDLGLKQAAGSGHLLALGTPENPSWLSLHLQDQ+ L
Sbjct: 241 PQPHAEPWAFSLDLGLKQAAGSGHLLALGTPENPSWLSLHLQDQEKTL 288
>gi|226371613 sex hormone-binding globulin isoform 4 precursor [Homo
sapiens]
Length = 287
Score = 438 bits (1126), Expect = e-123
Identities = 220/238 (92%), Positives = 220/238 (92%), Gaps = 18/238 (7%)
Query: 1 MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT 60
MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT
Sbjct: 1 MESRGPLATSRLLLLLLLLLLRHTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIAVMT 60
Query: 61 FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA 120
FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA
Sbjct: 61 FDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA 120
Query: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS 180
GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS
Sbjct: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPAS 180
Query: 181 NLRLP------------------AEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLR 220
NLRLP AEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLR
Sbjct: 181 NLRLPLVPALDGCLRRDSWLDKQAEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLR 238
Score = 111 bits (277), Expect = 1e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Query: 334 LPGEDSSTSFCLNGLWAQGQRLDVDQALNRSHEIWTHSCPQSPGNGTDASH 384
L GEDSSTSFCLNGLWAQGQRLDVDQALNRSHEIWTHSCPQSPGNGTDASH
Sbjct: 237 LRGEDSSTSFCLNGLWAQGQRLDVDQALNRSHEIWTHSCPQSPGNGTDASH 287
>gi|192447438 protein S, alpha preproprotein [Homo sapiens]
Length = 676
Score = 89.0 bits (219), Expect = 7e-18
Identities = 90/360 (25%), Positives = 165/360 (45%), Gaps = 44/360 (12%)
Query: 56 IAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHN-HWA 114
+ + F L +I++ S+ F+ RT+D EGVI Y ++ W ++ LR G+ E+QL N H +
Sbjct: 310 VLYLKFRLPEISRFSAEFDFRTYDSEGVILYAESIDHSAWLLIALRGGKIEVQLKNEHTS 369
Query: 115 QLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGG 174
++T G G +++G W+ V V+ S+ +++ E V+ + + GPL + ++ +
Sbjct: 370 KITTG-GDVINNGLWNMVSVEELEHSISIKIAKEAVMDINK-PGPLFKPENGLLETKVYF 427
Query: 175 LLFPAS---------NLRLPAEI--------SASAPTSL------RSCDVESNPGIFLPP 211
FP N RL I AS + + C V G + P
Sbjct: 428 AGFPRKVESELIKPINPRLDGCIRSWNLMKQGASGIKEIIQEKQNKHCLVTVEKGSYYPG 487
Query: 212 GTQAEFNLRDIPQPHAEPWAFSLDLGLKQAAGSGHLLALGTPENPSWLSLHLQD------ 265
A+F++ AE W ++ L ++ + G+G +LAL + N ++ L D
Sbjct: 488 SGIAQFHIDYNNVSSAEGWHVNVTLNIRPSTGTGVMLALVSGNNTVPFAVSLVDSTSEKS 547
Query: 266 QKVVLSSGSG-----PGLDLPLVLGLPLQLKLSMSRVVLSQGSKMKALALPPL-GLAPLL 319
Q ++LS + L L L+ +++ + + LS K++ ++ L +L
Sbjct: 548 QDILLSVENTVIYRIQALSLCSDQQSHLEFRVNRNNLELSTPLKIETISHEDLQRQLAVL 607
Query: 320 NLWAKPQGRLFLGALPGEDSS---TSFCLNGLW---AQGQRLDVDQALNRSHEIWTHSCP 373
+ K + +LG LP S + NG G +LD+D+A+++ ++I HSCP
Sbjct: 608 DKAMKAKVATYLGGLPDVPFSATPVNAFYNGCMEVNINGVQLDLDEAISKHNDIRAHSCP 667
>gi|221316735 growth arrest-specific 6 isoform 2 [Homo sapiens]
Length = 405
Score = 68.9 bits (167), Expect = 7e-12
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 27/249 (10%)
Query: 32 PVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNP 91
P +P A +++L P+ + F + T+ + F+ RT+DPEG++ + +
Sbjct: 9 PCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQ 68
Query: 92 KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVL 151
W +L LR GR E+QL + +GP ++ G W + V+ +++++V+ + V+
Sbjct: 69 DSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVM 128
Query: 152 RLRQVSGPLTSKRHPI--MRIALGGLLFPASNLRLP-------------------AEISA 190
++ V+G L + + + +GG+ F +L P I
Sbjct: 129 KI-AVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE 187
Query: 191 SAPTSLR-SCDVESNPGIFLPPGTQAEFNLRDIPQP----HAEPWAFSLDLGLKQAAGSG 245
+ + R C + G F P A ++L + P W + ++ AA +G
Sbjct: 188 TVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTG 247
Query: 246 HLLALGTPE 254
L AL P+
Sbjct: 248 VLFALWAPD 256
>gi|4557617 growth arrest-specific 6 isoform 1 precursor [Homo
sapiens]
Length = 678
Score = 68.9 bits (167), Expect = 7e-12
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 27/249 (10%)
Query: 32 PVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNP 91
P +P A +++L P+ + F + T+ + F+ RT+DPEG++ + +
Sbjct: 282 PCVPFSVAKSVKSLYLGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQ 341
Query: 92 KDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVL 151
W +L LR GR E+QL + +GP ++ G W + V+ +++++V+ + V+
Sbjct: 342 DSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVM 401
Query: 152 RLRQVSGPLTSKRHPI--MRIALGGLLFPASNLRLP-------------------AEISA 190
++ V+G L + + + +GG+ F +L P I
Sbjct: 402 KI-AVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQE 460
Query: 191 SAPTSLR-SCDVESNPGIFLPPGTQAEFNLRDIPQP----HAEPWAFSLDLGLKQAAGSG 245
+ + R C + G F P A ++L + P W + ++ AA +G
Sbjct: 461 TVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTG 520
Query: 246 HLLALGTPE 254
L AL P+
Sbjct: 521 VLFALWAPD 529
>gi|221316738 growth arrest-specific 6 isoform 3 [Homo sapiens]
Length = 379
Score = 65.9 bits (159), Expect = 6e-11
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 55 PIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWA 114
P+ + F + T+ + F+ RT+DPEG++ + + W +L LR GR E+QL +
Sbjct: 6 PVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGV 65
Query: 115 QLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPI--MRIAL 172
+GP ++ G W + V+ +++++V+ + V+++ V+G L + + + +
Sbjct: 66 GRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKI-AVAGDLFQPERGLYHLNLTV 124
Query: 173 GGLLFPASNLRLP-------------------AEISASAPTSLR-SCDVESNPGIFLPPG 212
GG+ F +L P I + + R C + G F P
Sbjct: 125 GGIPFHEKDLVQPINPRLDGCMRSWNWLNGEDTTIQETVKVNTRMQCFSVTERGSFYPGS 184
Query: 213 TQAEFNLRDIPQP----HAEPWAFSLDLGLKQAAGSGHLLALGTPE 254
A ++L + P W + ++ AA +G L AL P+
Sbjct: 185 GFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAPD 230
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 48.9 bits (115), Expect = 8e-06
Identities = 69/277 (24%), Positives = 106/277 (38%), Gaps = 45/277 (16%)
Query: 96 FMLGLRDGRPEIQL---HNHWAQLTVGAGPRLD--------DGRWHQVEVKMEGDSVLLE 144
F LR G P + L + H+ G G RL GRWH+V V+ E + +LL
Sbjct: 3381 FTARLRPGSPSLALFLSNGHFVAQMEGLGTRLRAQSRQRSRPGRWHKVSVRWEKNRILLV 3440
Query: 145 VDGEEVLRLRQVSGPLTSKRHPIMR-IALGGLLFPASNLRLPAEISAS------------ 191
DG HP + +GGL + + +LP + S
Sbjct: 3441 TDGARAWSQEGPHRQHQGAEHPQPHTLFVGGLPASSHSSKLPVTVGFSGCVKRLRLHGRP 3500
Query: 192 --APTSLRSCDV----ESNPGIFLPPGTQAEFNLRDIPQPHAEPWAFSLDLGLKQAAGSG 245
APT + G+F P + + P A L+L ++ A +G
Sbjct: 3501 LGAPTRMAGVTPCILGPLEAGLFFP----GSGGVITLDLPGATLPDVGLELEVRPLAVTG 3556
Query: 246 HLLALGTPENPSWLSLHLQDQKVVLSSGSGPG-----LDLPLVL--GLPLQLKLSMSRVV 298
+ LG P +L L + +++V+L + G G + P VL G +L + S V
Sbjct: 3557 LIFHLGQARTPPYLQLQVTEKQVLLRADDGAGEFSTSVTRPSVLCDGQWHRLAVMKSGNV 3616
Query: 299 LSQGSKMKALALPPLGLAPLLNLWAKPQGRLFLGALP 335
L +++ A + PLL A L+LG LP
Sbjct: 3617 L----RLEVDAQSNHTVGPLLAAAAGAPAPLYLGGLP 3649
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo
sapiens]
Length = 1331
Score = 47.8 bits (112), Expect = 2e-05
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 70 SSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLH---NHWAQLTVGAGPRLDD 126
S SF+ RTW+P G++ + + L + + + ++ +Q+ + +G L+D
Sbjct: 396 SVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQIDISSGSGLND 455
Query: 127 GRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSK 163
G+WH+V + + +L +DG+E +R + PL K
Sbjct: 456 GQWHEVRFLAKENFAILTIDGDEASAVR-TNSPLQVK 491
Score = 37.7 bits (86), Expect = 0.018
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 65 KITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQL-------T 117
K K + +T + EGVI +G+ + D+ L L+ + + L+ QL +
Sbjct: 206 KTLKDVIALNFKTSESEGVILHGE-GQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTS 264
Query: 118 VGAGPRLDDGRWHQVEVKMEGDSVLLEVD 146
V G LDD WH V ++ +G S+ L +D
Sbjct: 265 VMTGSLLDDHHWHSVVIERQGRSINLTLD 293
Score = 28.9 bits (63), Expect = 8.1
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 67 TKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRP---EIQLHNHWAQLTVGAGPR 123
T SF +T P GV + K+D+ L L+ + N ++ V +
Sbjct: 819 TSADISFYFKTLTPWGVFL--ENMGKEDFIKLELKSATEVSFSFDVGNGPVEIVVRSPTP 876
Query: 124 LDDGRWHQVEVKMEGDSVLLEVD 146
L+D +WH+V + L+VD
Sbjct: 877 LNDDQWHRVTAERNVKQASLQVD 899
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 46.6 bits (109), Expect = 4e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHN-HWAQLTVGAGPRLDD 126
K S +F+ RTW+ G + +G+ F+L L+DG+ ++ L + V AG L+D
Sbjct: 391 KVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLND 450
Query: 127 GRWHQVEVKMEGDSVLLEVDGEEVLR 152
G+WH V + + + VD + ++
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDDDTAVQ 476
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 46.6 bits (109), Expect = 4e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHN-HWAQLTVGAGPRLDD 126
K S +F+ RTW+ G + +G+ F+L L+DG+ ++ L + V AG L+D
Sbjct: 391 KVSVTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLND 450
Query: 127 GRWHQVEVKMEGDSVLLEVDGEEVLR 152
G+WH V + + + VD + ++
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDDDTAVQ 476
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 46.6 bits (109), Expect = 4e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHN-HWAQLTVGAGPRLDD 126
K S +F+ RTW+ G + +G+ F+L L+DG+ ++ L + V AG L+D
Sbjct: 391 KVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLND 450
Query: 127 GRWHQVEVKMEGDSVLLEVDGEEVLR 152
G+WH V + + + VD + ++
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDDDTAVQ 476
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo
sapiens]
Length = 1235
Score = 45.4 bits (106), Expect = 8e-05
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 62 DLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLT-VGA 120
D + + S++F+ RTW+ G++ + + +L L DG+ + L+ + + A
Sbjct: 312 DFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITA 371
Query: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
G L+DG+WH V + + + + + VDG+
Sbjct: 372 GVELNDGQWHSVSLSAKKNHLSVAVDGQ 399
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 72 SFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQL-------TVGAGPRL 124
S + +T +G++ + + P D L LR R + +++ A+L + G L
Sbjct: 184 SLKFKTMQSDGILLHRE-GPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLL 242
Query: 125 DDGRWHQVEVKMEGDSVLLEVD 146
DD WH V ++ G V VD
Sbjct: 243 DDQHWHSVLIQRLGKQVNFTVD 264
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo
sapiens]
Length = 1308
Score = 45.4 bits (106), Expect = 8e-05
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 62 DLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLT-VGA 120
D + + S++F+ RTW+ G++ + + +L L DG+ + L+ + + A
Sbjct: 385 DFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITA 444
Query: 121 GPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
G L+DG+WH V + + + + + VDG+
Sbjct: 445 GVELNDGQWHSVSLSAKKNHLSVAVDGQ 472
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 72 SFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQL-------TVGAGPRL 124
S + +T +G++ + + P D L LR R + +++ A+L + G L
Sbjct: 209 SLKFKTMQSDGILLHRE-GPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLL 267
Query: 125 DDGRWHQVEVKMEGDSVLLEVD 146
DD WH V ++ G V VD
Sbjct: 268 DDQHWHSVLIQRLGKQVNFTVD 289
>gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 42.7 bits (99), Expect = 5e-04
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPR--LD 125
K +FEVR G + +G + ++ + +++G+ ++++N + P+ L
Sbjct: 1662 KFEIAFEVRPRSSSGTLVHGHS-VNGEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLC 1720
Query: 126 DGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSK 163
DGRWH++ V + + V L+VD E + V GPL K
Sbjct: 1721 DGRWHRITVIRDSNVVQLDVDSE----VNHVVGPLNPK 1754
Score = 42.4 bits (98), Expect = 7e-04
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDG 127
K+ S +RT G+IFY ++D+ L L GR + +L + + + +DG
Sbjct: 1485 KSQFSIRLRTRSSHGMIFYVSDQEENDFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDG 1544
Query: 128 RWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIM-RIALGGL 175
WH V E S L +DG LR+ + S P T I I LGG+
Sbjct: 1545 LWHDVIFIRERSSGRLVIDG---LRVLEESLPPTEATWKIKGPIYLGGV 1590
>gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens]
Length = 1823
Score = 42.7 bits (99), Expect = 5e-04
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPR--LD 125
K +FEVR G + +G + ++ + +++G+ ++++N + P+ L
Sbjct: 1669 KFEIAFEVRPRSSSGTLVHGHS-VNGEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLC 1727
Query: 126 DGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSK 163
DGRWH++ V + + V L+VD E + V GPL K
Sbjct: 1728 DGRWHRITVIRDSNVVQLDVDSE----VNHVVGPLNPK 1761
Score = 42.4 bits (98), Expect = 7e-04
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDG 127
K+ S +RT G+IFY ++D+ L L GR + +L + + + +DG
Sbjct: 1492 KSQFSIRLRTRSSHGMIFYVSDQEENDFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDG 1551
Query: 128 RWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIM-RIALGGL 175
WH V E S L +DG LR+ + S P T I I LGG+
Sbjct: 1552 LWHDVIFIRERSSGRLVIDG---LRVLEESLPPTEATWKIKGPIYLGGV 1597
>gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 42.7 bits (99), Expect = 5e-04
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPR--LD 125
K +FEVR G + +G + ++ + +++G+ ++++N + P+ L
Sbjct: 1662 KFEIAFEVRPRSSSGTLVHGHS-VNGEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLC 1720
Query: 126 DGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSK 163
DGRWH++ V + + V L+VD E + V GPL K
Sbjct: 1721 DGRWHRITVIRDSNVVQLDVDSE----VNHVVGPLNPK 1754
Score = 42.4 bits (98), Expect = 7e-04
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 68 KTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDG 127
K+ S +RT G+IFY ++D+ L L GR + +L + + + +DG
Sbjct: 1485 KSQFSIRLRTRSSHGMIFYVSDQEENDFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDG 1544
Query: 128 RWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIM-RIALGGL 175
WH V E S L +DG LR+ + S P T I I LGG+
Sbjct: 1545 LWHDVIFIRERSSGRLVIDG---LRVLEESLPPTEATWKIKGPIYLGGV 1590
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 42.4 bits (98), Expect = 7e-04
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 72 SFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQ 131
+ E R +P+G++ Y D+ L L DGR +++ + + ++ G+WH+
Sbjct: 1397 ALEFRALEPQGLLLYNGNARGKDFLALALLDGRVQLRFDTGSGPAVLTSAVPVEPGQWHR 1456
Query: 132 VEVKMEGDSVLLEVDGE 148
+E+ L VDGE
Sbjct: 1457 LELSRHWRRGTLSVDGE 1473
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 42.4 bits (98), Expect = 7e-04
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 55 PIAVMTFDLTKITKTSSSFEVRTWDPEGVIFY-----GDTNPKDDWFMLGLRDGRPEIQL 109
P V + L ++ +T EVRT G++ + G+ D+ LGL+DG +
Sbjct: 4215 PGHVFSRSLPEVPETIE-LEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRY 4273
Query: 110 HNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVL 151
+ + + ++DG WH+V EG ++VDGEE++
Sbjct: 4274 QLGSGEARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELV 4315
Score = 30.4 bits (67), Expect = 2.8
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 74 EVRTWDPEGVIFY--GDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQ 131
E + P+GV+ + G + P +D+ L + G E + + + L GRWH+
Sbjct: 3956 EFKPLAPDGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRWHR 4015
Query: 132 VEV-KMEGDSVLLEVDGEEVLR 152
V ++ D L G VLR
Sbjct: 4016 VSAERLNKDGSLRVNGGRPVLR 4037
>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
Length = 1384
Score = 42.4 bits (98), Expect = 7e-04
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 72 SFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQL-HNHWAQLTVGAGPRLDDGRWH 130
SF RTWD G++ + L L +G+ + + + +L AG RL+DG WH
Sbjct: 386 SFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFWH 445
Query: 131 QVEVKMEGDSVLLEVDGEEVLRLRQVSGPL 160
+V + + ++ +D E +R VS PL
Sbjct: 446 EVNFVAQENHAVISIDDVEGAEVR-VSYPL 474
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 41.6 bits (96), Expect = 0.001
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 31 RPVLPTQSAHDP-PAVHLSNGP---GQEPIAVMTFDLTK-ITKTSSSFEV--RTWDPEGV 83
R V Q A P P ++G G P + + F L + + K S F V +T G+
Sbjct: 2965 RSVKVWQDACSPLPKTQANHGALQFGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGL 3024
Query: 84 IFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLL 143
+F+ T K+ + L L GR L +L + + + +DG+WH V +G+ L
Sbjct: 3025 VFH--TGTKNSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTVVFGHDGEKGRL 3082
Query: 144 EVDGEEVLRLRQVSGP 159
VDG LR R+ S P
Sbjct: 3083 VVDG---LRAREGSLP 3095
Score = 33.1 bits (74), Expect = 0.43
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 124 LDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLR 183
L DG+WH V V ++ + LE+D + Q+ P S + P + LGG + LR
Sbjct: 3236 LCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPASTQEP---LHLGGAPANLTTLR 3292
Query: 184 LP 185
+P
Sbjct: 3293 IP 3294
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 41.6 bits (96), Expect = 0.001
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 31 RPVLPTQSAHDP-PAVHLSNGP---GQEPIAVMTFDLTK-ITKTSSSFEV--RTWDPEGV 83
R V Q A P P ++G G P + + F L + + K S F V +T G+
Sbjct: 1300 RSVKVWQDACSPLPKTQANHGALQFGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGL 1359
Query: 84 IFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLL 143
+F+ T K+ + L L GR L +L + + + +DG+WH V +G+ L
Sbjct: 1360 VFH--TGTKNSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTVVFGHDGEKGRL 1417
Query: 144 EVDGEEVLRLRQVSGP 159
VDG LR R+ S P
Sbjct: 1418 VVDG---LRAREGSLP 1430
Score = 33.1 bits (74), Expect = 0.43
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 124 LDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLR 183
L DG+WH V V ++ + LE+D + Q+ P S + P + LGG + LR
Sbjct: 1571 LCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPASTQEP---LHLGGAPANLTTLR 1627
Query: 184 LP 185
+P
Sbjct: 1628 IP 1629
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 41.6 bits (96), Expect = 0.001
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 31 RPVLPTQSAHDP-PAVHLSNGP---GQEPIAVMTFDLTK-ITKTSSSFEV--RTWDPEGV 83
R V Q A P P ++G G P + + F L + + K S F V +T G+
Sbjct: 2909 RSVKVWQDACSPLPKTQANHGALQFGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGL 2968
Query: 84 IFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLL 143
+F+ T K+ + L L GR L +L + + + +DG+WH V +G+ L
Sbjct: 2969 VFH--TGTKNSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTVVFGHDGEKGRL 3026
Query: 144 EVDGEEVLRLRQVSGP 159
VDG LR R+ S P
Sbjct: 3027 VVDG---LRAREGSLP 3039
Score = 33.1 bits (74), Expect = 0.43
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 124 LDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLR 183
L DG+WH V V ++ + LE+D + Q+ P S + P + LGG + LR
Sbjct: 3180 LCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPASTQEP---LHLGGAPANLTTLR 3236
Query: 184 LP 185
+P
Sbjct: 3237 IP 3238
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 41.6 bits (96), Expect = 0.001
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 31 RPVLPTQSAHDP-PAVHLSNGP---GQEPIAVMTFDLTK-ITKTSSSFEV--RTWDPEGV 83
R V Q A P P ++G G P + + F L + + K S F V +T G+
Sbjct: 1356 RSVKVWQDACSPLPKTQANHGALQFGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGL 1415
Query: 84 IFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLL 143
+F+ T K+ + L L GR L +L + + + +DG+WH V +G+ L
Sbjct: 1416 VFH--TGTKNSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTVVFGHDGEKGRL 1473
Query: 144 EVDGEEVLRLRQVSGP 159
VDG LR R+ S P
Sbjct: 1474 VVDG---LRAREGSLP 1486
Score = 33.1 bits (74), Expect = 0.43
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 124 LDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLR 183
L DG+WH V V ++ + LE+D + Q+ P S + P + LGG + LR
Sbjct: 1627 LCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPASTQEP---LHLGGAPANLTTLR 1683
Query: 184 LP 185
+P
Sbjct: 1684 IP 1685
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 40.0 bits (92), Expect = 0.004
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 38 SAHDPPAVHLSN---GPGQEPIAVMTFDLTKI-TKTSSSFEVRTWDPEGVIFYGDTNPKD 93
+A PA+ + + G + + FD TK+ + + EVRT G++FY
Sbjct: 2748 AAESEPALLIGSKQFGLSRNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARINHA 2807
Query: 94 DWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDG 147
D+ + LR+G P +++DG+WH++++ +L VDG
Sbjct: 2808 DFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKIMRSKQEGILYVDG 2861
Score = 31.6 bits (70), Expect = 1.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 73 FEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTV----GAGPRLDDGR 128
FE RT GV+ G ++ K D + + D + + N + T G L DG+
Sbjct: 2962 FEFRTTTTTGVLL-GISSQKMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQ 3020
Query: 129 WHQVEVKMEGDSVLLEVDGEEV 150
WH+V + L VDG +V
Sbjct: 3021 WHKVTANKIKHRIELTVDGNQV 3042
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 40.0 bits (92), Expect = 0.004
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 38 SAHDPPAVHLSN---GPGQEPIAVMTFDLTKI-TKTSSSFEVRTWDPEGVIFYGDTNPKD 93
+A PA+ + + G + + FD TK+ + + EVRT G++FY
Sbjct: 2752 AAESEPALLIGSKQFGLSRNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARINHA 2811
Query: 94 DWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDG 147
D+ + LR+G P +++DG+WH++++ +L VDG
Sbjct: 2812 DFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQWHKIKIMRSKQEGILYVDG 2865
Score = 31.6 bits (70), Expect = 1.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 73 FEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTV----GAGPRLDDGR 128
FE RT GV+ G ++ K D + + D + + N + T G L DG+
Sbjct: 2966 FEFRTTTTTGVLL-GISSQKMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQ 3024
Query: 129 WHQVEVKMEGDSVLLEVDGEEV 150
WH+V + L VDG +V
Sbjct: 3025 WHKVTANKIKHRIELTVDGNQV 3046
>gi|18640734 contactin associated protein-like 5 [Homo sapiens]
Length = 1306
Score = 40.0 bits (92), Expect = 0.004
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 65 KITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLT-VGAGPR 123
+I S SF+ RTW+ +G++ + + +L L G + + ++ + G
Sbjct: 385 QIDGLSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGILRLVIQKMTERVAEILTGSN 444
Query: 124 LDDGRWHQVEVKMEGDSVLLEVDGE 148
L+DG WH V + + + L +D E
Sbjct: 445 LNDGLWHSVSINARRNRITLTLDDE 469
Score = 33.1 bits (74), Expect = 0.43
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 63 LTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA-- 120
L K S + ++ +GV+F+G+ + D L L+ GR + L+ ++ + +
Sbjct: 197 LMSTLKDVISLKFKSMQGDGVLFHGE-GQRGDHITLELQKGRLALHLNLGDSKARLSSSL 255
Query: 121 -----GPRLDDGRWHQVEVKMEGDSVLLEVD 146
G LDD WH V ++ G V VD
Sbjct: 256 PSATLGSLLDDQHWHSVLIERVGKQVNFTVD 286
>gi|33469935 EGF-like, fibronectin type III and laminin G domains
isoform 3 [Homo sapiens]
Length = 375
Score = 38.5 bits (88), Expect = 0.010
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 59 MTFDLTKITKTSSS------FEVRTWDPEGVIFY-GDT--NPKDDWFMLGLRDGRPEIQL 109
+T+D I K S +T +G++ + GD+ P D+ LGLRDG
Sbjct: 204 LTYDNPDILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSY 263
Query: 110 HNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVD 146
+ ++ +DGRWH+V+ +G S + VD
Sbjct: 264 NLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVD 300
Score = 29.3 bits (64), Expect = 6.2
Identities = 15/71 (21%), Positives = 31/71 (43%)
Query: 81 EGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDS 140
+GV+ Y D+ + L G E + + + L G WH++ V +
Sbjct: 13 DGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHELRVSRTAKN 72
Query: 141 VLLEVDGEEVL 151
+L+VD ++++
Sbjct: 73 GILQVDKQKIV 83
>gi|33469931 EGF-like, fibronectin type III and laminin G domains
isoform 2 [Homo sapiens]
Length = 775
Score = 38.5 bits (88), Expect = 0.010
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 59 MTFDLTKITKTSSS------FEVRTWDPEGVIFY-GDT--NPKDDWFMLGLRDGRPEIQL 109
+T+D I K S +T +G++ + GD+ P D+ LGLRDG
Sbjct: 604 LTYDNPDILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSY 663
Query: 110 HNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVD 146
+ ++ +DGRWH+V+ +G S + VD
Sbjct: 664 NLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVD 700
Score = 29.3 bits (64), Expect = 6.2
Identities = 15/71 (21%), Positives = 31/71 (43%)
Query: 81 EGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDS 140
+GV+ Y D+ + L G E + + + L G WH++ V +
Sbjct: 413 DGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHELRVSRTAKN 472
Query: 141 VLLEVDGEEVL 151
+L+VD ++++
Sbjct: 473 GILQVDKQKIV 483
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,259,699
Number of Sequences: 37866
Number of extensions: 878251
Number of successful extensions: 2228
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2068
Number of HSP's gapped (non-prelim): 164
length of query: 384
length of database: 18,247,518
effective HSP length: 104
effective length of query: 280
effective length of database: 14,309,454
effective search space: 4006647120
effective search space used: 4006647120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.