Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DSN1 Sequence: fasta or formatted (356aa) NCBI GI: 223972618
Description:

DSN1, MIND kinetochore complex component, homolog isoform 1

Referenced in:

Centromere Proteins

Other entries for this name:
alt mRNA [356aa] DSN1, MIND kinetochore complex component, homolog isoform 1
alt mRNA [356aa] DSN1, MIND kinetochore complex component, homolog isoform 1
alt prot [249aa] DSN1, MIND kinetochore complex component, homolog isoform 2
alt prot [340aa] DSN1, MIND kinetochore complex component, homolog isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         16           1
 C cysteine            1.7          6           1
 D aspartate           4.5         16           1
 E glutamate           8.7         31           2
 F phenylalanine       3.7         13           1
 G glycine             5.1         18           2
 H histidine           2.8         10           1
 I isoleucine          3.4         12           2
 K lysine              7.9         28           2
 L leucine            11.2         40           3
 M methionine          2.8         10           1
 N asparagine          2.2          8           1
 P proline             3.4         12           2
 Q glutamine           8.7         31           2
 R arginine            4.8         17           2
 S serine             14.0         50           2
 T threonine           4.5         16           1
 V valine              4.2         15           1
 W tryptophan          0.6          2           1
 Y tyrosine            1.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DSN1, MIND kinetochore complex component, homolog i... 
DSN1                  1.000   DSN1, MIND kinetochore complex component, homolog i...
DSN1                  1.000   DSN1, MIND kinetochore complex component, homolog i...
DSN1                  0.955   DSN1, MIND kinetochore complex component, homolog i...
DSN1                  0.657   DSN1, MIND kinetochore complex component, homolog i...
CEP110                0.022   centrosomal protein 110kDa 
SYNE1                 0.018   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.018   spectrin repeat containing, nuclear envelope 1 isof...
LRRCC1                0.018   sodium channel associated protein 2 isoform b [Homo...
LRRCC1                0.018   sodium channel associated protein 2 isoform a [Homo...
DAB2IP                0.018   disabled homolog 2 interacting protein isoform 2 [Ho...
SLK                   0.015   serine/threonine kinase 2 
PDE4DIP               0.015   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.015   phosphodiesterase 4D interacting protein isoform 1 ...
CCDC147               0.015   coiled-coil domain containing 147 
DAB2IP                0.015   disabled homolog 2 interacting protein isoform 1 [Ho...
CENPE                 0.015   centromere protein E 
LCA5                  0.013   Leber congenital amaurosis 5 
LCA5                  0.013   Leber congenital amaurosis 5 
SLFN13                0.012   schlafen family member 13 
CCDC36                0.012   coiled-coil domain containing 36 
CCDC36                0.012   coiled-coil domain containing 36 
RPGRIP1               0.012   retinitis pigmentosa GTPase regulator interacting p...
TCHP                  0.012   trichoplein 
TCHP                  0.012   trichoplein 
CENPF                 0.012   centromere protein F 
FHAD1                 0.012   forkhead-associated (FHA) phosphopeptide binding do...
UNC84B                0.012   unc-84 homolog B 
NCOR1                 0.010   nuclear receptor co-repressor 1 
MYH11                 0.010   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press