PRICKLE1 14342

Name: PRICKLE1	Sequence: fasta or formatted (831aa)		NCBI GI: 222136678
Description: prickle homolog 1		Referenced in: LIM Domain Proteins Planar Cell Polarity
Other entries for this name: alt mRNA [831aa] prickle homolog 1 alt mRNA [831aa] prickle homolog 1 alt mRNA [831aa] prickle homolog 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 46 1 C cysteine 4.1 34 2 D aspartate 6.3 52 3 E glutamate 8.3 69 3 F phenylalanine 3.2 27 1 G glycine 6.1 51 2 H histidine 3.2 27 3 I isoleucine 2.9 24 2 K lysine 5.9 49 4 L leucine 8.7 72 3 M methionine 2.3 19 1 N asparagine 3.2 27 2 P proline 5.4 45 2 Q glutamine 5.7 47 2 R arginine 6.4 53 4 S serine 11.3 94 7 T threonine 3.1 26 2 V valine 3.1 26 1 W tryptophan 1.2 10 1 Y tyrosine 4.0 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 prickle homolog 1 PRICKLE1 1.000 prickle homolog 1 PRICKLE1 1.000 prickle homolog 1 PRICKLE1 1.000 prickle homolog 1 PRICKLE2 0.434 prickle-like 2 PRICKLE3 0.269 LIM domain only 6 TES 0.133 testin isoform 1 TES 0.133 testin isoform 2 PRICKLE4 0.115 over-expressed breast tumor protein LMCD1 0.087 LIM and cysteine-rich domains 1 FHL3 0.046 four and a half LIM domains 3 TGFB1I1 0.043 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.043 transforming growth factor beta 1 induced transcript... LDB3 0.042 LIM domain binding 3 isoform 2 LDB3 0.042 LIM domain binding 3 isoform 1 FHL1 0.041 four and a half LIM domains 1 isoform 2 FHL1 0.041 four and a half LIM domains 1 isoform 1 FHL1 0.041 four and a half LIM domains 1 isoform 2 PXN 0.041 paxillin isoform 3 PXN 0.041 paxillin isoform 2 PXN 0.041 paxillin isoform 1 FHL1 0.041 four and a half LIM domains 1 isoform 3 FHL1 0.041 four and a half LIM domains 1 isoform 5 FHL1 0.041 four and a half LIM domains 1 isoform 2 FHL2 0.040 four and a half LIM domains 2 FHL2 0.040 four and a half LIM domains 2 FHL2 0.040 four and a half LIM domains 2 FHL2 0.040 four and a half LIM domains 2 FHL5 0.038 activator of cAMP-responsive element modulator (CREM... PDLIM7 0.036 PDZ and LIM domain 7 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.