PRICKLE3 36238

Name: PRICKLE3	Sequence: fasta or formatted (615aa)		NCBI GI: 7710129
Description: LIM domain only 6		Referenced in: LIM Domain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 47 2 C cysteine 6.3 39 2 D aspartate 4.2 26 3 E glutamate 7.5 46 4 F phenylalanine 3.7 23 2 G glycine 7.6 47 3 H histidine 5.4 33 5 I isoleucine 2.9 18 2 K lysine 2.3 14 2 L leucine 6.0 37 2 M methionine 1.5 9 1 N asparagine 1.3 8 1 P proline 9.6 59 3 Q glutamine 4.2 26 2 R arginine 10.6 65 4 S serine 9.6 59 5 T threonine 3.1 19 3 V valine 3.4 21 1 W tryptophan 1.0 6 1 Y tyrosine 2.1 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM domain only 6 PRICKLE2 0.400 prickle-like 2 PRICKLE1 0.353 prickle homolog 1 PRICKLE1 0.353 prickle homolog 1 PRICKLE1 0.353 prickle homolog 1 PRICKLE1 0.353 prickle homolog 1 TES 0.202 testin isoform 1 TES 0.202 testin isoform 2 PRICKLE4 0.147 over-expressed breast tumor protein LMCD1 0.131 LIM and cysteine-rich domains 1 FHL3 0.059 four and a half LIM domains 3 FHL1 0.058 four and a half LIM domains 1 isoform 2 FHL1 0.058 four and a half LIM domains 1 isoform 2 FHL1 0.058 four and a half LIM domains 1 isoform 3 FHL1 0.058 four and a half LIM domains 1 isoform 5 FHL1 0.058 four and a half LIM domains 1 isoform 2 FHL2 0.055 four and a half LIM domains 2 FHL2 0.055 four and a half LIM domains 2 FHL2 0.055 four and a half LIM domains 2 FHL2 0.055 four and a half LIM domains 2 TGFB1I1 0.054 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.054 transforming growth factor beta 1 induced transcript... PXN 0.051 paxillin isoform 3 PXN 0.051 paxillin isoform 2 PXN 0.051 paxillin isoform 1 LDB3 0.051 LIM domain binding 3 isoform 2 LDB3 0.051 LIM domain binding 3 isoform 1 LPXN 0.051 leupaxin isoform 1 LPXN 0.051 leupaxin isoform 2 FHL1 0.050 four and a half LIM domains 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.