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Search of human proteins with 217416372
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217416372 coiled-coil domain containing 142 [Homo sapiens]
(743 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217416372 coiled-coil domain containing 142 [Homo sapiens] 1513 0.0
gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo ... 39 0.017
gi|239756464 PREDICTED: hypothetical protein LOC197350 [Homo sap... 38 0.030
gi|169210653 PREDICTED: hypothetical protein LOC197350 [Homo sap... 38 0.030
gi|7656936 zinc finger, HIT domain containing 2 [Homo sapiens] 36 0.11
gi|28269687 zygote arrest 1 [Homo sapiens] 35 0.33
gi|7661864 USP6 N-terminal like isoform 1 [Homo sapiens] 34 0.43
gi|122937432 USP6 N-terminal like isoform 2 [Homo sapiens] 34 0.43
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 34 0.43
gi|126131104 fibrocystin isoform 2 [Homo sapiens] 33 0.96
gi|126131102 fibrocystin isoform 1 [Homo sapiens] 33 0.96
gi|169168671 PREDICTED: similar to MHC class II antigen [Homo sa... 33 1.3
gi|194097411 transmembrane protein 119 [Homo sapiens] 32 2.1
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 32 2.8
gi|10190702 MRS2-like, magnesium homeostasis factor [Homo sapiens] 31 3.6
gi|46559747 hypothetical protein LOC399947 [Homo sapiens] 31 3.6
gi|71061468 centromere protein E [Homo sapiens] 31 4.8
gi|210147462 von Willebrand factor A domain containing 5B1 [Homo... 31 4.8
gi|148727370 immediate early response 5-like [Homo sapiens] 31 4.8
gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens] 31 4.8
gi|239757609 PREDICTED: hypothetical protein [Homo sapiens] 30 6.2
gi|239755913 PREDICTED: hypothetical protein [Homo sapiens] 30 6.2
gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo ... 30 6.2
gi|239750427 PREDICTED: hypothetical protein XP_002347392 [Homo ... 30 6.2
gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo ... 30 6.2
gi|239744729 PREDICTED: hypothetical protein XP_002343255 [Homo ... 30 6.2
gi|38016937 lemur tyrosine kinase 2 [Homo sapiens] 30 6.2
gi|21361902 cadherin-like 26 isoform b [Homo sapiens] 30 6.2
gi|29570800 cadherin-like 26 isoform a [Homo sapiens] 30 6.2
gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens] 30 8.1
>gi|217416372 coiled-coil domain containing 142 [Homo sapiens]
Length = 743
Score = 1513 bits (3918), Expect = 0.0
Identities = 743/743 (100%), Positives = 743/743 (100%)
Query: 1 MAQASRSGSLPPLVIVPPLRAQPGGTGEEQWERSRTGGLRWEVHCWPSGTSGGTPWWPTP 60
MAQASRSGSLPPLVIVPPLRAQPGGTGEEQWERSRTGGLRWEVHCWPSGTSGGTPWWPTP
Sbjct: 1 MAQASRSGSLPPLVIVPPLRAQPGGTGEEQWERSRTGGLRWEVHCWPSGTSGGTPWWPTP 60
Query: 61 ADVSEDYEADAAAWRRGPAGGGPIPPALQRLRAVLLRLHREREQLLQARDCAYHLQSAVR 120
ADVSEDYEADAAAWRRGPAGGGPIPPALQRLRAVLLRLHREREQLLQARDCAYHLQSAVR
Sbjct: 61 ADVSEDYEADAAAWRRGPAGGGPIPPALQRLRAVLLRLHREREQLLQARDCAYHLQSAVR 120
Query: 121 LMKTLSPGSPSGGPSPLPQWCRDLQLHPSQGAVLRIGPGETLEPLLLARPIGLAAQCLEA 180
LMKTLSPGSPSGGPSPLPQWCRDLQLHPSQGAVLRIGPGETLEPLLLARPIGLAAQCLEA
Sbjct: 121 LMKTLSPGSPSGGPSPLPQWCRDLQLHPSQGAVLRIGPGETLEPLLLARPIGLAAQCLEA 180
Query: 181 VIEMQLRALGREPASPGLSSQLAELLFALPAYHTLQRKALSHVPGAARPFPTSRVLRLLT 240
VIEMQLRALGREPASPGLSSQLAELLFALPAYHTLQRKALSHVPGAARPFPTSRVLRLLT
Sbjct: 181 VIEMQLRALGREPASPGLSSQLAELLFALPAYHTLQRKALSHVPGAARPFPTSRVLRLLT 240
Query: 241 GERGCQVASRLDEALQGSALRDQLRRRCQEEGDLLPGLLGLVGGVAGSASCGLGLGGAGA 300
GERGCQVASRLDEALQGSALRDQLRRRCQEEGDLLPGLLGLVGGVAGSASCGLGLGGAGA
Sbjct: 241 GERGCQVASRLDEALQGSALRDQLRRRCQEEGDLLPGLLGLVGGVAGSASCGLGLGGAGA 300
Query: 301 LWSQYWTLLWAACAQSLDLNLGPWRDPRATAQQLSQALGQASLPQECEKELASLCHRLLH 360
LWSQYWTLLWAACAQSLDLNLGPWRDPRATAQQLSQALGQASLPQECEKELASLCHRLLH
Sbjct: 301 LWSQYWTLLWAACAQSLDLNLGPWRDPRATAQQLSQALGQASLPQECEKELASLCHRLLH 360
Query: 361 QSLIWSWDQGFCQALGSALGGQSSLPTSSGTAELLQQLFPPLLDALREPRLRRIFCQPAG 420
QSLIWSWDQGFCQALGSALGGQSSLPTSSGTAELLQQLFPPLLDALREPRLRRIFCQPAG
Sbjct: 361 QSLIWSWDQGFCQALGSALGGQSSLPTSSGTAELLQQLFPPLLDALREPRLRRIFCQPAG 420
Query: 421 LCTLQTTLLWFLGRAQQYLAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQ 480
LCTLQTTLLWFLGRAQQYLAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQ
Sbjct: 421 LCTLQTTLLWFLGRAQQYLAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQ 480
Query: 481 QLGLEIQKLTAQIQLLPEESLSVFSQECHKQAMQGFKLYMPRGRYWRLRLCPEPPSAPSE 540
QLGLEIQKLTAQIQLLPEESLSVFSQECHKQAMQGFKLYMPRGRYWRLRLCPEPPSAPSE
Sbjct: 481 QLGLEIQKLTAQIQLLPEESLSVFSQECHKQAMQGFKLYMPRGRYWRLRLCPEPPSAPSE 540
Query: 541 YAGLVVRTVLEPVLQGLQGLPPQAQAPALGQALTAIVGAWLDHILTHGIRFSLQGALQLK 600
YAGLVVRTVLEPVLQGLQGLPPQAQAPALGQALTAIVGAWLDHILTHGIRFSLQGALQLK
Sbjct: 541 YAGLVVRTVLEPVLQGLQGLPPQAQAPALGQALTAIVGAWLDHILTHGIRFSLQGALQLK 600
Query: 601 QDFGVVRELLEEEQWSLSPDLRQTLLMLSIFQQLDGALLCLLQQPLPKSQVHRRPPCCCA 660
QDFGVVRELLEEEQWSLSPDLRQTLLMLSIFQQLDGALLCLLQQPLPKSQVHRRPPCCCA
Sbjct: 601 QDFGVVRELLEEEQWSLSPDLRQTLLMLSIFQQLDGALLCLLQQPLPKSQVHRRPPCCCA 660
Query: 661 CQEVQTTKLPSSCLNSLESLEPPLQPGTSPAQTGQLQSTLGGRGPSPEGYLVGNQQAWLA 720
CQEVQTTKLPSSCLNSLESLEPPLQPGTSPAQTGQLQSTLGGRGPSPEGYLVGNQQAWLA
Sbjct: 661 CQEVQTTKLPSSCLNSLESLEPPLQPGTSPAQTGQLQSTLGGRGPSPEGYLVGNQQAWLA 720
Query: 721 LRQHQRPRWHLPFFSCLGTSPES 743
LRQHQRPRWHLPFFSCLGTSPES
Sbjct: 721 LRQHQRPRWHLPFFSCLGTSPES 743
>gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo
sapiens]
Length = 2146
Score = 38.9 bits (89), Expect = 0.017
Identities = 70/270 (25%), Positives = 107/270 (39%), Gaps = 43/270 (15%)
Query: 456 PPLLHEAEALYSLASEESLALEVEQQLGLEIQKLTAQIQLLPEESLSVFSQECHKQAMQG 515
PP+L AE L SL ESL L + Q + L + L +E L++ S + +Q
Sbjct: 151 PPMLDVAELLTSLLRTESLGLALGQAQE-PLHSLLEAAEDLAQELLALRSLVELRALLQ- 208
Query: 516 FKLYMPRGRYWRLRLCPE---PPSAPSEYAGLVVRTVLEPVLQGLQGLPPQAQAP--ALG 570
PRG L L E PS G + L L G P++ P +L
Sbjct: 209 ----RPRGTSGPLELLSEALCSVRGPSSTVGPSLNWYEASDLMELVGQEPESALPDSSLS 264
Query: 571 QALTAIVGAW----LDHILTHGIRFSLQGALQLKQDFGVVRELLEE-----EQWSLSPDL 621
A + ++GA L +L ++ + G L D R+L+ + E+ +L D+
Sbjct: 265 PACSELIGALDSHPLSRLLWRRLKPLILGKLLFAPDTPFTRKLMAQVNRTFEELTLLRDV 324
Query: 622 RQTLLMLS--IFQQL-DGALLCLLQQPLPKSQVHRRPPCCCACQEVQTTKLPSSCLNSLE 678
R+ ML IF + D + + +LQ+ L RR P + +E
Sbjct: 325 REVWEMLGPRIFTFMNDSSNVAMLQRLLQMQDEGRRQP-------------RPGGRDHME 371
Query: 679 SLEPPLQPGT-------SPAQTGQLQSTLG 701
+L L PG+ + A G L TLG
Sbjct: 372 ALRSFLDPGSGGYSWQDAHADVGHLVGTLG 401
>gi|239756464 PREDICTED: hypothetical protein LOC197350 [Homo
sapiens]
Length = 432
Score = 38.1 bits (87), Expect = 0.030
Identities = 47/143 (32%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 247 VASRLDEALQGSALRDQLRRRCQEEGDLLPGL---LGLVGGVAG--SASCGLGLGGAGAL 301
VA L A Q + RD L R+ +EEG PGL GLV G AG A CG+ L G A
Sbjct: 5 VAGTLRLATQMADTRDSLGRKLREEGGPGPGLPRGTGLVPGAAGCPRAPCGVCLSGLDAP 64
Query: 302 WSQYWTLLWAACAQSLDLNLGPWRDPRATAQ---QLSQALGQASLPQECEKELASLCHRL 358
Q Q L L R R + LS G + P L LC R
Sbjct: 65 RGQ------LRQPQQLVRELSGCRALRGCPRVFLLLSSGPGSSLEPGAFLAGLRELCGRS 118
Query: 359 LHQSLIWSWDQGFCQALGSALGG 381
H SL+ + F + + GG
Sbjct: 119 PHWSLVQLLTELFRRVAEESAGG 141
>gi|169210653 PREDICTED: hypothetical protein LOC197350 [Homo
sapiens]
Length = 432
Score = 38.1 bits (87), Expect = 0.030
Identities = 47/143 (32%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 247 VASRLDEALQGSALRDQLRRRCQEEGDLLPGL---LGLVGGVAG--SASCGLGLGGAGAL 301
VA L A Q + RD L R+ +EEG PGL GLV G AG A CG+ L G A
Sbjct: 5 VAGTLRLATQMADTRDSLGRKLREEGGPGPGLPRGTGLVPGAAGCPRAPCGVCLSGLDAP 64
Query: 302 WSQYWTLLWAACAQSLDLNLGPWRDPRATAQ---QLSQALGQASLPQECEKELASLCHRL 358
Q Q L L R R + LS G + P L LC R
Sbjct: 65 RGQ------LRQPQQLVRELSGCRALRGCPKVFLLLSSGPGSSLEPGAFLAGLRELCGRS 118
Query: 359 LHQSLIWSWDQGFCQALGSALGG 381
H SL+ + F + + GG
Sbjct: 119 PHWSLVQLLTELFRRVAEESAGG 141
>gi|7656936 zinc finger, HIT domain containing 2 [Homo sapiens]
Length = 403
Score = 36.2 bits (82), Expect = 0.11
Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 16/158 (10%)
Query: 143 DLQLHPSQGAVLRIGPGETLEPLLLARPIGLAAQCLEAVIEMQLRA---LGREPASPGLS 199
+L+L P++ + EP R +G V+ ++ A L R P SP +
Sbjct: 153 ELELAPARTPPDSVKDASAAEPAAAERVLGDVPGACTPVVPTRIPAIVSLSRGPVSPLVR 212
Query: 200 SQLAELLFALPAYHTLQRKALSHVPGAARPFPTSRVLRLLTGERGC-QVASRLDEALQGS 258
QL +LFA HTL AL H A L ++G G QV + +EALQ +
Sbjct: 213 FQLPNVLFAYA--HTL---ALYHGGDDALLSDFCATLLGVSGALGAQQVFASAEEALQAA 267
Query: 259 ALRDQLRRRCQEEGDLLPGLLGLVGGVAGSASCGLGLG 296
A E G+ PG LG G + A LG G
Sbjct: 268 A-------HVLEAGEHPPGPLGTRGAMHEVARILLGEG 298
>gi|28269687 zygote arrest 1 [Homo sapiens]
Length = 424
Score = 34.7 bits (78), Expect = 0.33
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 185 QLRALGREPASPGLSSQLAELLF-------ALPAYHTLQRKALSHVPGAARPFPTSRVLR 237
Q R G PAS S+ A L F A + + QR+ L + P R R
Sbjct: 41 QQRGRGCLPASSPCSAGAASLSFPGCGRLTAAEYFDSYQRERLMALLAQVGPGLGPRARR 100
Query: 238 LLTGERGCQVASRLDEALQGSALRDQLRRRCQE-EGDLLPGLLGLVGG 284
+ + QV+ R+D A+Q S R L+RR ++ E PG G GG
Sbjct: 101 AGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAEGTTGG 148
>gi|7661864 USP6 N-terminal like isoform 1 [Homo sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.43
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 433 GRAQQYLAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQQLGLEIQKLTAQ 492
GR + W+ A +L+ D LHE E + ++A VE+Q LEI++ T
Sbjct: 25 GREGAEIEPWEDADYLVYKVTDRFGFLHEEEL-----PDHNVA--VERQKHLEIERTTKW 77
Query: 493 IQLLPEESLSVFSQECHKQAMQGFKLYMPRGRYWRLRL 530
+++L +++ H++ +G L + RG W L L
Sbjct: 78 LKMLKGWEKYKNTEKFHRRIYKGIPLQL-RGEVWALLL 114
>gi|122937432 USP6 N-terminal like isoform 2 [Homo sapiens]
Length = 845
Score = 34.3 bits (77), Expect = 0.43
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 433 GRAQQYLAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQQLGLEIQKLTAQ 492
GR + W+ A +L+ D LHE E + ++A VE+Q LEI++ T
Sbjct: 42 GREGAEIEPWEDADYLVYKVTDRFGFLHEEEL-----PDHNVA--VERQKHLEIERTTKW 94
Query: 493 IQLLPEESLSVFSQECHKQAMQGFKLYMPRGRYWRLRL 530
+++L +++ H++ +G L + RG W L L
Sbjct: 95 LKMLKGWEKYKNTEKFHRRIYKGIPLQL-RGEVWALLL 131
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 34.3 bits (77), Expect = 0.43
Identities = 48/158 (30%), Positives = 57/158 (36%), Gaps = 49/158 (31%)
Query: 552 PVLQGLQGLPPQAQAPALGQALTAIVGAWLDHILTHGIRFSLQGALQLKQDFGVVRELLE 611
PVLQ QGLP P +GQ +R LQG L
Sbjct: 4177 PVLQSGQGLPGVGIMPTVGQ-----------------LRAQLQGVLAKNPQLR------- 4212
Query: 612 EEQWSLSPDLRQTLLMLSIFQQLDGALLCLLQQPLPKSQVHRRPPCCCACQEVQTTKLPS 671
LSP +Q L L L+Q+ L +SQ R+ P QE T P
Sbjct: 4213 ----HLSPQQQQQLQAL------------LMQRQLQQSQAVRQTP---PYQEPGTQTSP- 4252
Query: 672 SCLNSLESLEPPLQPGTSPAQTGQLQSTLGGRGPSPEG 709
L L +P L P QTG LQ G GP P+G
Sbjct: 4253 --LQGLLGCQPQLGGFPGP-QTGPLQEL--GAGPRPQG 4285
>gi|126131104 fibrocystin isoform 2 [Homo sapiens]
Length = 3396
Score = 33.1 bits (74), Expect = 0.96
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 404 DALREPRLRRIFCQPAGLCTLQTTLLWFLGRAQQYLAAWD---PASFLLLIQKDLPP 457
D L PR +LQ+ LW + R+ QY A +D P ++LLL+ DLPP
Sbjct: 2605 DTLSNPRGWMALLLDQETYSLQSENLW-INRSLQYSATFDNFAPGNYLLLVHTDLPP 2660
>gi|126131102 fibrocystin isoform 1 [Homo sapiens]
Length = 4074
Score = 33.1 bits (74), Expect = 0.96
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 404 DALREPRLRRIFCQPAGLCTLQTTLLWFLGRAQQYLAAWD---PASFLLLIQKDLPP 457
D L PR +LQ+ LW + R+ QY A +D P ++LLL+ DLPP
Sbjct: 2605 DTLSNPRGWMALLLDQETYSLQSENLW-INRSLQYSATFDNFAPGNYLLLVHTDLPP 2660
>gi|169168671 PREDICTED: similar to MHC class II antigen [Homo
sapiens]
Length = 241
Score = 32.7 bits (73), Expect = 1.3
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Query: 16 VPPLRAQPGGTGEEQWERSRTGGLRWEVHCWPSGTSGGTPWWPTPADVSEDYE-ADAAAW 74
VP ++ G GE W + GL G P P + E E A +A W
Sbjct: 12 VPGAPSRLDGAGEAPWGTEHSPGLAVRSIRLGRHPQGQKPGRPQAEHLPEAQELAPSAEW 71
Query: 75 RRGPAGGGPIPPALQRLRAVLLRLHREREQLLQARDCAY 113
G A G L+ L L+RLH++R LQ + Y
Sbjct: 72 DSGLAAGR----VLKLLLRALIRLHKKRFNELQPKGTMY 106
>gi|194097411 transmembrane protein 119 [Homo sapiens]
Length = 283
Score = 32.0 bits (71), Expect = 2.1
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 638 LLCLLQQPLPKSQVHRRPPCCCACQEVQTTKLPSSCLNSLESLEPPLQPGTSPAQTGQLQ 697
LL LL +P + P ++V + S SL PP P SP G
Sbjct: 12 LLLLLLGSVPATDARSVPLKATFLEDVAGSGEAEGSSASSPSLPPPWTPALSPTSMGPQP 71
Query: 698 STLGGRGPSPEGYLVG 713
TLGG P P +L G
Sbjct: 72 ITLGGPSP-PTNFLDG 86
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 31.6 bits (70), Expect = 2.8
Identities = 50/222 (22%), Positives = 78/222 (35%), Gaps = 43/222 (19%)
Query: 479 EQQLGLEIQKLTAQIQLLPEESLSVFSQECHKQAMQGFKLYMPRGRYWRLRLCPEPPSAP 538
+Q + Q L AQ Q P+ +F ++ +Q +PP A
Sbjct: 443 QQTPSTQAQGLPAQAQATPQHQQQLFLKQQQQQQ--------------------QPPPAQ 482
Query: 539 SEYAGLVVRTVLEPVLQGLQGLPPQAQAPALGQALTAIVGAWLDHILTHGIRFSLQGALQ 598
+ AG + + Q Q + P Q PA+ Q G ++ Q Q
Sbjct: 483 QQPAGTFYQQQ-QAQTQQFQAVHPATQQPAIAQFPVVSQGGSQQQLM--------QNFYQ 533
Query: 599 LKQDFGVVRELLEEEQWSLSPDLRQTLLMLSIFQQLDGALLCLLQQPLPKSQVHRRP--- 655
+Q ++ +++Q L+ L Q LM + QQP P+ +P
Sbjct: 534 QQQ-----QQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAPQPAPA 588
Query: 656 --PCCCAC----QEVQTTKLPSSCLNSLESLEPPLQPGTSPA 691
P A +VQTT P+ + SL PP P T A
Sbjct: 589 QEPAIQAPVRQQPKVQTTPPPAVQGQKVGSLTPPSSPKTQRA 630
>gi|10190702 MRS2-like, magnesium homeostasis factor [Homo sapiens]
Length = 443
Score = 31.2 bits (69), Expect = 3.6
Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 10/149 (6%)
Query: 387 TSSGTAELLQQLFPPLLDALREP--------RLRRIFCQPAGLCTLQTTLLWFLGRAQQY 438
T G +LQ L LDAL +P +L + L L+T + F +
Sbjct: 199 TLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEI 258
Query: 439 LAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQQLGLEIQKLTAQIQLLPE 498
L + L + + P + ++ A A E L LE +L ++ ++++L +
Sbjct: 259 LDEEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNAARELRVLID 318
Query: 499 ESLSV--FSQECHKQAMQGFKLYMPRGRY 525
+S S+ + + H+ M L + G +
Sbjct: 319 DSQSIIFINLDSHRNVMMRLNLQLTMGTF 347
>gi|46559747 hypothetical protein LOC399947 [Homo sapiens]
Length = 197
Score = 31.2 bits (69), Expect = 3.6
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 65 EDYEADAAAWRRGPAGGGPIPPALQRLRAVLLRLHREREQLLQARDCAYHLQSAVRLMKT 124
E+YE D + RG GG P P A RL R Q RD + S + +
Sbjct: 99 EEYERDHCSGSRG-GGGLPRPGRQAPTHAKETRLER------QPRDSPFCAPSNASSLSS 151
Query: 125 LSPGSPSGGPSPLP 138
SPG P GP P
Sbjct: 152 SSPGLPCQGPCAPP 165
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 30.8 bits (68), Expect = 4.8
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 451 IQKDLPPLLHEAEALYS----LASEESLALEVEQQLGLEIQKLTAQIQLLPEESLSVFSQ 506
+QK+L + E EAL L+ +SL EVE+ L EIQ + ++ ++ E +FS+
Sbjct: 725 LQKELNKEVEENEALREEVILLSELKSLPSEVER-LRKEIQDKSEELHIITSEKDKLFSE 783
Query: 507 ECHKQA 512
HK++
Sbjct: 784 VVHKES 789
>gi|210147462 von Willebrand factor A domain containing 5B1 [Homo
sapiens]
Length = 1215
Score = 30.8 bits (68), Expect = 4.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 550 LEPVLQGLQGLPPQAQAPALGQALTAIVG-AWLDH 583
LEP+ +G GL P+A G+ +VG AWL+H
Sbjct: 1117 LEPLAKGKLGLEPRAVVEHTGKLWATVVGLAWLEH 1151
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 30.8 bits (68), Expect = 4.8
Identities = 32/124 (25%), Positives = 46/124 (37%)
Query: 80 GGGPIPPALQRLRAVLLRLHREREQLLQARDCAYHLQSAVRLMKTLSPGSPSGGPSPLPQ 139
GGG R L +LH+ + LQ + + + + G+P+GG L +
Sbjct: 96 GGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAAAAAGAPAGGAGALSE 155
Query: 140 WCRDLQLHPSQGAVLRIGPGETLEPLLLARPIGLAAQCLEAVIEMQLRALGREPASPGLS 199
L P GA R P E L+P P+ L A+ RA A PG +
Sbjct: 156 LPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSAPPGAA 215
Query: 200 SQLA 203
A
Sbjct: 216 PPAA 219
>gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens]
Length = 880
Score = 30.8 bits (68), Expect = 4.8
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 11 PPLVIVP-PLRAQPGGTGEEQWERSRTGGLRWE----VHCWPSGTSGGTPWWPTPADVSE 65
PP P P R + GTG R LR + + W T+G +P P+P S
Sbjct: 335 PPTPSSPRPRRERGAGTGAS---REMAPFLRCQERSLIPSWRQPTAGDSP--PSPQSSST 389
Query: 66 DYEADAAAWRRGPAGGGPIPPALQRLRAVLLRLHREREQLLQARDCAYHLQSAVRLMKTL 125
D G PP L R R +H E + D +R ++
Sbjct: 390 QKGRDPQCTSSGKREER-YPPELPRGRIPTSWVHEETDSW--GTDAGNPTPQRLRAIEAT 446
Query: 126 SPGSPSGGPSPLPQ 139
+ G + GPSPLP+
Sbjct: 447 TKGISARGPSPLPR 460
>gi|239757609 PREDICTED: hypothetical protein [Homo sapiens]
Length = 571
Score = 30.4 bits (67), Expect = 6.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 293 LGLGGAGALWSQYWTLLWAACAQSLD---LNLGPWRDPRATAQQLSQALGQASLP 344
LG+ GA+W + W L W S+D + W +P ++Q++ +LG LP
Sbjct: 509 LGVAAVGAVWGKKWKLPWLWPRSSVDRARVLSAAWPEP--PSRQVTTSLGCGFLP 561
>gi|239755913 PREDICTED: hypothetical protein [Homo sapiens]
Length = 340
Score = 30.4 bits (67), Expect = 6.2
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 610 LEEEQWSLSPDLRQTLLMLS---IFQQLDGA-----LLCLLQQPLPKSQVHRRPPCC--- 658
LEE+ S +TL +L + QQ + A + LL PL +SQ P C
Sbjct: 109 LEEQHERESSGDEETLALLKRQGLLQQPEQAPFTSRMGLLLVFPLIQSQSRTDPSLCNIT 168
Query: 659 ------CA--CQEVQTTKLPSSCLNSLESL 680
C CQ + TK P+ CLN +E+L
Sbjct: 169 AEVLLNCLRDCQPLSLTKEPADCLNGIETL 198
>gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo
sapiens]
Length = 571
Score = 30.4 bits (67), Expect = 6.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 293 LGLGGAGALWSQYWTLLWAACAQSLD---LNLGPWRDPRATAQQLSQALGQASLP 344
LG+ GA+W + W L W S+D + W +P ++Q++ +LG LP
Sbjct: 509 LGVAAVGAVWGKKWKLPWLWPRSSVDRARVLSAAWPEP--PSRQVTTSLGCGFLP 561
>gi|239750427 PREDICTED: hypothetical protein XP_002347392 [Homo
sapiens]
Length = 340
Score = 30.4 bits (67), Expect = 6.2
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 610 LEEEQWSLSPDLRQTLLMLS---IFQQLDGA-----LLCLLQQPLPKSQVHRRPPCC--- 658
LEE+ S +TL +L + QQ + A + LL PL +SQ P C
Sbjct: 109 LEEQHERESSGDEETLALLKRQGLLQQPEQAPFTSRMGLLLVFPLIQSQSRTDPSLCNIT 168
Query: 659 ------CA--CQEVQTTKLPSSCLNSLESL 680
C CQ + TK P+ CLN +E+L
Sbjct: 169 AEVLLNCLRDCQPLSLTKEPADCLNGIETL 198
>gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo
sapiens]
Length = 571
Score = 30.4 bits (67), Expect = 6.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 293 LGLGGAGALWSQYWTLLWAACAQSLD---LNLGPWRDPRATAQQLSQALGQASLP 344
LG+ GA+W + W L W S+D + W +P ++Q++ +LG LP
Sbjct: 509 LGVAAVGAVWGKKWKLPWLWPRSSVDRARVLSAAWPEP--PSRQVTTSLGCGFLP 561
>gi|239744729 PREDICTED: hypothetical protein XP_002343255 [Homo
sapiens]
Length = 340
Score = 30.4 bits (67), Expect = 6.2
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 610 LEEEQWSLSPDLRQTLLMLS---IFQQLDGA-----LLCLLQQPLPKSQVHRRPPCC--- 658
LEE+ S +TL +L + QQ + A + LL PL +SQ P C
Sbjct: 109 LEEQHERESSGDEETLALLKRQGLLQQPEQAPFTSRMGLLLVFPLIQSQSRTDPSLCNIT 168
Query: 659 ------CA--CQEVQTTKLPSSCLNSLESL 680
C CQ + TK P+ CLN +E+L
Sbjct: 169 AEVLLNCLRDCQPLSLTKEPADCLNGIETL 198
>gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]
Length = 1503
Score = 30.4 bits (67), Expect = 6.2
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 635 DGALLCLLQQPLPKSQVHRRPPCCCACQEVQTTKLPSSCLNSLESLEPPLQPGTSPAQTG 694
D L L P P S+ P +V L S ++ + L PP +P S +T
Sbjct: 976 DSLLEDSLSAPFPASEPSLETPDSLESVDVHEALLDSLGSHTPQKLVPPDKPADSGYETE 1035
Query: 695 QLQSTLGGRGPSPEG 709
L+S P+PEG
Sbjct: 1036 NLESPEWTLHPAPEG 1050
>gi|21361902 cadherin-like 26 isoform b [Homo sapiens]
Length = 165
Score = 30.4 bits (67), Expect = 6.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 348 EKELASLCHRLLHQSLIWSWDQGFCQALGSALGGQSSLPTSSGTAELLQQLFPPLLDAL 406
E +A ++ LH + + D G+ + S G P+ S A L Q+L P LLD+L
Sbjct: 89 EGRMAETLNQKLHVANVLEDDPGYLPHVYSEEGECGGAPSLSSLASLEQELQPDLLDSL 147
>gi|29570800 cadherin-like 26 isoform a [Homo sapiens]
Length = 832
Score = 30.4 bits (67), Expect = 6.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 348 EKELASLCHRLLHQSLIWSWDQGFCQALGSALGGQSSLPTSSGTAELLQQLFPPLLDAL 406
E +A ++ LH + + D G+ + S G P+ S A L Q+L P LLD+L
Sbjct: 756 EGRMAETLNQKLHVANVLEDDPGYLPHVYSEEGECGGAPSLSSLASLEQELQPDLLDSL 814
>gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]
Length = 4753
Score = 30.0 bits (66), Expect = 8.1
Identities = 49/183 (26%), Positives = 69/183 (37%), Gaps = 22/183 (12%)
Query: 166 LLARPIGLAAQCLEAVIEMQLRALGREPASPGLSSQLAELLFALPAYHTLQRKALSHVPG 225
LL RP+ LA L V E+ L G A ++ L + +L+R+ +S
Sbjct: 1820 LLLRPVALALPDLRQVAELTLLGAGMRDAF--------QMATRLSKFFSLERELVSGPLP 1871
Query: 226 AARPF------PTSRVLRLLTGERGCQVASRLDEALQGSALRDQLRRRCQEEGDLLPGLL 279
P T R L + E CQ L + + LR L G L L
Sbjct: 1872 CRLPLLKQILEDTIRTLNVTKEEPKCQKPRSLAAIEEAALLRSPLFSILN--GLHLHNLR 1929
Query: 280 GLVGGVAGSASCGLGLGGAGALWSQYWTLLWAACAQSLDLNLGPWRDPRATAQQLSQALG 339
GL+ + SAS L A Y + + + L P D + +QLSQAL
Sbjct: 1930 GLLCALFPSASQVL------AEPMTYKLMKPLVVEELQQVGLDPSPDILGSLEQLSQALS 1983
Query: 340 QAS 342
+AS
Sbjct: 1984 RAS 1986
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,516,671
Number of Sequences: 37866
Number of extensions: 1870244
Number of successful extensions: 6452
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 6410
Number of HSP's gapped (non-prelim): 65
length of query: 743
length of database: 18,247,518
effective HSP length: 110
effective length of query: 633
effective length of database: 14,082,258
effective search space: 8914069314
effective search space used: 8914069314
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.