USP6NL 2615

Name: USP6NL	Sequence: fasta or formatted (845aa)		NCBI GI: 122937432
Description: USP6 N-terminal like isoform 2		Referenced in: Rab
Other entries for this name: alt prot [828aa] USP6 N-terminal like isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 58 3 C cysteine 0.4 3 1 D aspartate 4.9 41 2 E glutamate 7.3 62 3 F phenylalanine 4.0 34 3 G glycine 5.7 48 2 H histidine 3.7 31 2 I isoleucine 2.8 24 2 K lysine 6.9 58 2 L leucine 8.4 71 3 M methionine 1.8 15 1 N asparagine 3.2 27 1 P proline 8.5 72 4 Q glutamine 4.6 39 2 R arginine 6.7 57 2 S serine 9.3 79 3 T threonine 4.3 36 2 V valine 5.1 43 2 W tryptophan 1.3 11 1 Y tyrosine 4.3 36 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 USP6 N-terminal like isoform 2 USP6NL 0.979 USP6 N-terminal like isoform 1 USP6 0.140 ubiquitin specific protease 6 TBC1D3 0.129 TBC1 domain family, member 3 TBC1D3E 0.129 TBC1 domain family, member 3E TBC1D3C 0.129 TBC1 domain family member 3C TBC1D3D 0.129 TBC1 domain family, member 3D TBC1D3F 0.128 TBC1 domain family, member 3F TBC1D3B 0.128 TBC1 domain family, member 3B TBC1D3H 0.128 TBC1 domain family, member 3H TBC1D3G 0.128 TBC1 domain family, member 3G TBC1D26 0.090 TBC1 domain family, member 26 EVI5 0.074 ecotropic viral integration site 5 EVI5L 0.071 ecotropic viral integration site 5-like isoform 1 [... EVI5L 0.071 ecotropic viral integration site 5-like isoform 2 [H... TBC1D10B 0.069 TBC1 domain family, member 10B TBC1D10A 0.065 TBC1 domain family, member 10A LOC100292664 0.059 PREDICTED: similar to TBC1 domain family, member 28... TBC1D10C 0.059 TBC1 domain family, member 10C TBC1D27 0.059 PREDICTED: TBC1 domain family, member 27 TBC1D28 0.059 TBC1 domain family, member 28 TBC1D27 0.059 PREDICTED: TBC1 domain family, member 27 RABGAP1 0.059 RAB GTPase activating protein 1 TBC1D27 0.057 PREDICTED: TBC1 domain family, member 27 TBC1D1 0.057 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member... LOC100134348 0.056 PREDICTED: similar to TBC1 domain family, member 3 ... RABGAP1L 0.053 RAB GTPase activating protein 1-like isoform A [Homo... TBC1D12 0.050 TBC1 domain family, member 12 TBC1D4 0.050 TBC1 domain family, member 4 GRTP1 0.048 growth hormone regulated TBC protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.