CCDC142 13728

Name: CCDC142	Sequence: fasta or formatted (743aa)		NCBI GI: 217416372
Description: coiled-coil domain containing 142		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 71 3 C cysteine 3.0 22 3 D aspartate 2.4 18 1 E glutamate 6.1 45 3 F phenylalanine 1.9 14 2 G glycine 8.9 66 3 H histidine 2.0 15 1 I isoleucine 1.9 14 1 K lysine 1.3 10 1 L leucine 17.9 133 3 M methionine 0.8 6 1 N asparagine 0.4 3 1 P proline 8.7 65 2 Q glutamine 9.3 69 2 R arginine 6.9 51 3 S serine 7.8 58 2 T threonine 3.8 28 2 V valine 3.4 25 2 W tryptophan 2.7 20 2 Y tyrosine 1.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 142 ABCA7 0.009 ATP-binding cassette, sub-family A, member 7 LOC197350 0.009 PREDICTED: hypothetical protein LOC197350 LOC197350 0.009 PREDICTED: hypothetical protein LOC197350 ZNHIT2 0.007 zinc finger, HIT domain containing 2 ZAR1 0.007 zygote arrest 1 USP6NL 0.006 USP6 N-terminal like isoform 1 USP6NL 0.006 USP6 N-terminal like isoform 2 MLL2 0.006 myeloid/lymphoid or mixed-lineage leukemia 2 PKHD1 0.005 fibrocystin isoform 2 PKHD1 0.005 fibrocystin isoform 1 LOC651845 0.005 PREDICTED: similar to MHC class II antigen TMEM119 0.005 transmembrane protein 119 AAK1 0.005 AP2 associated kinase 1 MRS2 0.004 MRS2-like, magnesium homeostasis factor C11orf87 0.004 hypothetical protein LOC399947 CENPE 0.004 centromere protein E VWA5B1 0.004 von Willebrand factor A domain containing 5B1 [Homo... IER5L 0.004 immediate early response 5-like GAS2L2 0.004 growth arrest-specific 2 like 2 LOC100292673 0.003 PREDICTED: hypothetical protein LOC100293988 0.003 PREDICTED: hypothetical protein LOC100291194 0.003 PREDICTED: hypothetical protein XP_002348117 LOC100291425 0.003 PREDICTED: hypothetical protein XP_002347392 LOC100288065 0.003 PREDICTED: hypothetical protein XP_002344233 LOC100287871 0.003 PREDICTED: hypothetical protein XP_002343255 LMTK2 0.003 lemur tyrosine kinase 2 CDH26 0.003 cadherin-like 26 isoform b CDH26 0.003 cadherin-like 26 isoform a DNHD1 0.003 dynein heavy chain domain 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.