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Search of human proteins with 217272829
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217272829 nuclear transcription factor Y, gamma isoform 3
[Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Ho... 651 0.0
gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Hom... 647 0.0
gi|217272831 nuclear transcription factor Y, gamma isoform 1 [Ho... 635 0.0
gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Ho... 557 e-159
gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Ho... 555 e-158
gi|38455394 DNA-directed DNA polymerase epsilon 4 [Homo sapiens] 64 1e-10
gi|8393116 chromatin accessibility complex 1 [Homo sapiens] 59 6e-09
gi|4505389 nuclear transcription factor Y, alpha isoform 1 [Homo... 59 8e-09
gi|18426973 DR1-associated protein 1 [Homo sapiens] 56 5e-08
gi|221139761 zinc finger protein 853 [Homo sapiens] 51 2e-06
gi|11496974 nuclear transcription factor Y, alpha isoform 2 [Hom... 50 4e-06
gi|44890059 involucrin [Homo sapiens] 48 1e-05
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 46 4e-05
gi|93141033 PAX interacting protein 1 [Homo sapiens] 45 7e-05
gi|38788260 bromodomain PHD finger transcription factor isoform ... 45 7e-05
gi|38788274 bromodomain PHD finger transcription factor isoform ... 45 7e-05
gi|38570099 glutamine-rich 1 [Homo sapiens] 45 9e-05
gi|38570097 glutamine-rich 1 [Homo sapiens] 45 9e-05
gi|56549696 E1A binding protein p400 [Homo sapiens] 44 3e-04
gi|110347429 mediator complex subunit 12 [Homo sapiens] 43 3e-04
gi|33286444 mastermind-like 2 [Homo sapiens] 42 8e-04
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 42 8e-04
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 42 8e-04
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 42 0.001
gi|62865633 Sp3 transcription factor isoform 2 [Homo sapiens] 41 0.002
gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens] 41 0.002
gi|4506495 regulatory factor X3 isoform a [Homo sapiens] 40 0.004
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 40 0.004
gi|4758010 clock [Homo sapiens] 39 0.007
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 38 0.011
>gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Homo
sapiens]
Length = 334
Score = 651 bits (1680), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQI 300
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQI
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQI 300
Query: 301 QQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 334
QQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 301 QQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 334
>gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Homo
sapiens]
Length = 335
Score = 647 bits (1668), Expect = 0.0
Identities = 334/335 (99%), Positives = 334/335 (99%), Gaps = 1/335 (0%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG-QLYQ 299
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG QLYQ
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 300
Query: 300 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 334
IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 301 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 335
>gi|217272831 nuclear transcription factor Y, gamma isoform 1 [Homo
sapiens]
Length = 354
Score = 635 bits (1638), Expect = 0.0
Identities = 334/354 (94%), Positives = 334/354 (94%), Gaps = 20/354 (5%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ-------------------QITQTE 281
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ QITQTE
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE 300
Query: 282 VQQGQQQFSQFTDG-QLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 334
VQQGQQQFSQFTDG QLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 354
>gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Homo
sapiens]
Length = 301
Score = 557 bits (1436), Expect = e-159
Identities = 299/335 (89%), Positives = 299/335 (89%), Gaps = 35/335 (10%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
A QPQ GQTMQVMQQIITNTGEIQQIP
Sbjct: 181 A-------------------------QPQ---------QGQTMQVMQQIITNTGEIQQIP 206
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQ-LYQ 299
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQ LYQ
Sbjct: 207 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 266
Query: 300 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 334
IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 267 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 301
>gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Homo
sapiens]
Length = 297
Score = 555 bits (1430), Expect = e-158
Identities = 296/335 (88%), Positives = 296/335 (88%), Gaps = 39/335 (11%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVK
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVK- 59
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
RNDIAMAITKFDQFDFLIDIVPR
Sbjct: 60 -------------------------------------RNDIAMAITKFDQFDFLIDIVPR 82
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 83 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 142
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP
Sbjct: 143 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 202
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG-QLYQ 299
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG QLYQ
Sbjct: 203 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQ 262
Query: 300 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 334
IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 263 IQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 297
>gi|38455394 DNA-directed DNA polymerase epsilon 4 [Homo sapiens]
Length = 117
Score = 64.3 bits (155), Expect = 1e-10
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 TVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKR 93
+V R+ LPLAR+K ++K D DV + EA + A+AA++F+ + A+ + KR
Sbjct: 32 SVPGARLSRLPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKR 91
Query: 94 RTLQRNDIAMAITKFDQFDFL 114
+TLQR D+ AI D+F FL
Sbjct: 92 KTLQRRDLDNAIEAVDEFAFL 112
>gi|8393116 chromatin accessibility complex 1 [Homo sapiens]
Length = 131
Score = 58.9 bits (141), Expect = 6e-09
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 39 RVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQR 98
R+ LPL+RI+ IMK +V I+ EA VL AKA ++F+ L ++ H +++ L
Sbjct: 15 RLISLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTY 74
Query: 99 NDIAMAITKFDQFDFLIDIVPR--------DELKPPKRQEE 131
+D+A + + F FL DI+P+ LK KR+E+
Sbjct: 75 SDLANTAQQSETFQFLADILPKKILASKYLKMLKEEKREED 115
>gi|4505389 nuclear transcription factor Y, alpha isoform 1 [Homo
sapiens]
Length = 347
Score = 58.5 bits (140), Expect = 8e-09
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
QQ VQ Q + Q ++S +Q Q++ QP Q + + GQ + +VQA P
Sbjct: 26 QQGGVTAVQLQTEAQVASASGQQVQTLQVVQGQPLMVQVSGGQLITSTGQPI-MVQAVPG 84
Query: 210 GQAQQAQSGTGQTMQVMQQI-ITNTGEI-----QQIPVQLNAGQLQYIRLAQPVSGTQVV 263
GQ Q Q +QQI + G+I Q + VQ GQ Q I + QP T V
Sbjct: 85 GQGQTIMQVPVSGTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQQIIIQQP--QTAVT 142
Query: 264 QGQIQT---LATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQP 314
GQ QT +A QQ+ QT +GQ Q + +QQVT+P + P
Sbjct: 143 AGQTQTQQQIAVQGQQVAQT--AEGQTIVYQPVNADGTILQQVTVPVSGMITIP 194
Score = 49.7 bits (117), Expect = 4e-06
Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 34/194 (17%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQA 206
T+ Q P + QG QQ Q IQ GQ + Q QQGQT QI+
Sbjct: 89 TIMQVPVS-GTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQ------------QIIIQ 135
Query: 207 QPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQI---PVQLNAGQLQYIRL---------A 254
QPQ Q+ T Q + V Q + T E Q I PV + LQ + + A
Sbjct: 136 QPQTAVTAGQTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQVTVPVSGMITIPA 195
Query: 255 QPVSGTQVVQGQIQTLATNAQQITQT--------EVQQGQQQFSQFTDGQLYQIQQVTMP 306
++G Q+VQ T T++ Q T T V G G + IQ++ +P
Sbjct: 196 ASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLP 255
Query: 307 AGQDL-AQPMFIQS 319
+ L +P+++ +
Sbjct: 256 GAEMLEEEPLYVNA 269
Score = 32.7 bits (73), Expect = 0.47
Identities = 40/130 (30%), Positives = 51/130 (39%), Gaps = 28/130 (21%)
Query: 226 MQQIITNTGE-IQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQI--QTLATNAQQITQTEV 282
M+Q N+ +QI VQ AGQ+Q Q G VQ Q Q + + QQ+ +V
Sbjct: 1 MEQYTANSNSSTEQIVVQ--AGQIQQ----QQQGGVTAVQLQTEAQVASASGQQVQTLQV 54
Query: 283 QQGQQQFSQFTDGQL------------------YQIQQVTMPAGQDLAQPMFIQSAN-QP 323
QGQ Q + GQL I QV + Q L Q + Q
Sbjct: 55 VQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVPPGQIQI 114
Query: 324 SDGQAPQVTG 333
GQA QV G
Sbjct: 115 QGGQAVQVQG 124
>gi|18426973 DR1-associated protein 1 [Homo sapiens]
Length = 205
Score = 55.8 bits (133), Expect = 5e-08
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 44 PLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 103
P ARIKKIM+ DE++ ++A PV+ ++A ++F+ L +A T+ +T+ + +
Sbjct: 13 PPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQ 72
Query: 104 AITKFDQFDFLIDIV 118
I QFDFL D+V
Sbjct: 73 CIELEQQFDFLKDLV 87
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 50.8 bits (120), Expect = 2e-06
Identities = 60/198 (30%), Positives = 80/198 (40%), Gaps = 21/198 (10%)
Query: 122 ELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIA 181
+L+ K Q Q + P + + QP VQ Q + Q QQ T Q Q++
Sbjct: 132 QLQQEKHQSVHHQELKPELQLMHQ-QQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQ 190
Query: 182 QPQQGQTTP----VTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQ 237
Q Q Q + Q + QQ Q++Q Q Q Q QQ Q Q Q+ QQ Q
Sbjct: 191 QEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQ---QQEQLQQQ--------Q 239
Query: 238 QIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQL 297
Q+ + GQLQ L Q Q Q Q Q L Q+ Q + Q Q+Q Q QL
Sbjct: 240 QLLLLQQQGQLQQQLLQQ-----QQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQL 294
Query: 298 YQIQQVTMPAGQDLAQPM 315
Q QQ + Q P+
Sbjct: 295 LQQQQEQLQQQQLQPPPL 312
Score = 48.5 bits (114), Expect = 8e-06
Identities = 64/217 (29%), Positives = 90/217 (41%), Gaps = 8/217 (3%)
Query: 121 DELKPPKRQEEVRQSVTPAEPVQY-YFTLAQQPTA---VQVQGQQQGQQTTSSTTTIQPG 176
+E +P +R+ +++Q EP Q QQP +Q Q QQ GQQ S +
Sbjct: 80 EETRPGQRELQLQQLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQ 139
Query: 177 QIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEI 236
+ + + Q + QQVQ Q + Q Q +Q Q+ Q QV+QQ ++
Sbjct: 140 SVHHQELKPELQLMHQQQQLQPQQVQEQQ-RLQQQQEQLQTQQAQEQQVLQQQEQLQQQV 198
Query: 237 Q-QIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG 295
Q Q +Q QLQ +L Q Q Q Q Q QQ QQGQ Q Q
Sbjct: 199 QEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQ-QQLLQQ 257
Query: 296 QLYQIQQVTMPAGQ-DLAQPMFIQSANQPSDGQAPQV 331
Q Q+QQ + Q L Q + +Q Q Q Q+
Sbjct: 258 QQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQL 294
>gi|11496974 nuclear transcription factor Y, alpha isoform 2 [Homo
sapiens]
Length = 318
Score = 49.7 bits (117), Expect = 4e-06
Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 34/194 (17%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQA 206
T+ Q P + QG QQ Q IQ GQ + Q QQGQT QI+
Sbjct: 60 TIMQVPVS-GTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQ------------QIIIQ 106
Query: 207 QPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQI---PVQLNAGQLQYIRL---------A 254
QPQ Q+ T Q + V Q + T E Q I PV + LQ + + A
Sbjct: 107 QPQTAVTAGQTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQVTVPVSGMITIPA 166
Query: 255 QPVSGTQVVQGQIQTLATNAQQITQT--------EVQQGQQQFSQFTDGQLYQIQQVTMP 306
++G Q+VQ T T++ Q T T V G G + IQ++ +P
Sbjct: 167 ASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLP 226
Query: 307 AGQDL-AQPMFIQS 319
+ L +P+++ +
Sbjct: 227 GAEMLEEEPLYVNA 240
Score = 46.6 bits (109), Expect = 3e-05
Identities = 52/164 (31%), Positives = 65/164 (39%), Gaps = 28/164 (17%)
Query: 156 QVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQ--VGEGQQVQIVQAQPQGQAQ 213
QVQGQ Q + GQ I+ Q G MQ V Q +Q +Q P GQ
Sbjct: 25 QVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVPPGQI- 83
Query: 214 QAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQT---L 270
Q Q G Q + VQ GQ Q I + QP T V GQ QT +
Sbjct: 84 QIQGG------------------QAVQVQGQQGQTQQIIIQQP--QTAVTAGQTQTQQQI 123
Query: 271 ATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQP 314
A QQ+ QT +GQ Q + +QQVT+P + P
Sbjct: 124 AVQGQQVAQT--AEGQTIVYQPVNADGTILQQVTVPVSGMITIP 165
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 48.1 bits (113), Expect = 1e-05
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 122 ELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIA 181
+L+ P++QE Q P + QQ +++ QQ+GQ Q GQ+ +
Sbjct: 222 QLELPEQQEG--QLELPQQQEGQLELSEQQEGQLELSEQQEGQLKHLEH---QEGQLEVP 276
Query: 182 QPQQGQTTPVTMQVGEGQQVQIVQAQPQ------GQAQQAQSGTGQTMQVMQQIITNTGE 235
+ Q GQ + Q G+ + + + QP+ GQ + + GQ + QQ G+
Sbjct: 277 EEQMGQLKYLEQQEGQLKHLDQQEKQPELPEQQMGQLKHLEQQEGQPKHLEQQ----EGQ 332
Query: 236 IQQIPVQLNAGQLQYIRLAQ-PVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTD 294
++Q+ Q GQL+++ + + + +GQ+ Q+ Q E QQGQ + + +
Sbjct: 333 LEQLEEQ--EGQLKHLEQQEGQLEHLEHQEGQLGLPEQQVLQLKQLEKQQGQPKHLEEEE 390
Query: 295 GQLYQIQQ 302
GQL + Q
Sbjct: 391 GQLKHLVQ 398
Score = 45.4 bits (106), Expect = 7e-05
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 25/197 (12%)
Query: 122 ELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIA 181
+L+ P++QE Q P + QQ +++ QQ+GQ S Q GQ+ ++
Sbjct: 202 QLELPEQQEG--QLELPEQQEGQLELPEQQEGQLELPQQQEGQLELSEQ---QEGQLELS 256
Query: 182 QPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPV 241
+ Q+GQ + Q G Q+++ + Q GQ + + GQ + QQ E Q
Sbjct: 257 EQQEGQLKHLEHQEG---QLEVPEEQ-MGQLKYLEQQEGQLKHLDQQ------EKQPELP 306
Query: 242 QLNAGQLQYIRL--AQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQL-- 297
+ GQL+++ QP Q +GQ++ L Q+ E Q+GQ + + +GQL
Sbjct: 307 EQQMGQLKHLEQQEGQPKHLEQQ-EGQLEQLEEQEGQLKHLEQQEGQLEHLEHQEGQLGL 365
Query: 298 -----YQIQQVTMPAGQ 309
Q++Q+ GQ
Sbjct: 366 PEQQVLQLKQLEKQQGQ 382
Score = 38.1 bits (87), Expect = 0.011
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 30/192 (15%)
Query: 122 ELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIA 181
+LK +QE +Q P + + L QQ + QQ+GQ Q GQ+
Sbjct: 292 QLKHLDQQE--KQPELPEQQMGQLKHLEQQEGQPKHLEQQEGQLEQLEE---QEGQLKHL 346
Query: 182 QPQQGQTTPVTMQVG-----EGQQVQIVQAQPQ-GQAQQAQSGTGQTMQVMQQIITNTGE 235
+ Q+GQ + Q G E Q +Q+ Q + Q GQ + + GQ ++QQ
Sbjct: 347 EQQEGQLEHLEHQEGQLGLPEQQVLQLKQLEKQQGQPKHLEEEEGQLKHLVQQ------- 399
Query: 236 IQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDG 295
GQL++ L Q + + Q++ L Q+ E Q+GQ + + G
Sbjct: 400 ---------EGQLKH--LVQQEGQLEQQERQVEHLEQQVGQLKHLEEQEGQLKHLEQQQG 448
Query: 296 QL-YQIQQVTMP 306
QL QQV P
Sbjct: 449 QLEVPEQQVGQP 460
Score = 37.0 bits (84), Expect = 0.025
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 155 VQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQ 214
VQ +GQ + Q+ Q GQ+ + Q+GQ + Q G+ + + QP+ Q+
Sbjct: 407 VQQEGQLEQQERQVEHLEQQVGQLKHLEEQEGQLKHLEQQQGQLEVPEQQVGQPKNLEQE 466
Query: 215 AQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNA 274
+ +++ +Q +++ QL + Q GQ + L
Sbjct: 467 EKQ-----LELPEQQEGQVKHLEKQEAQLELPEQQV--------------GQPKHLEQQE 507
Query: 275 QQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQ 327
+ + E Q GQ + + +GQL ++Q GQ L QP+F + Q D Q
Sbjct: 508 KHLEHPEQQDGQLKHLEQQEGQLKDLEQ---QKGQ-LEQPVFAPAPGQVQDIQ 556
Score = 30.8 bits (68), Expect = 1.8
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 10/188 (5%)
Query: 124 KPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQI----I 179
K P+ QE +Q E Q QQ + Q QQ + + Q+ +
Sbjct: 80 KEPQEQELQQQHWEQHEEYQKAENPEQQLKQEKTQRDQQLNKQLEEEKKLLDQQLDQELV 139
Query: 180 IAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ-GQAQQAQSGTGQT-MQVMQQIITNTGEIQ 237
Q G +++ E Q+ + + Q GQ + + GQ + Q+ E Q
Sbjct: 140 KRDEQLGMKKEQLLELPEQQEGHLKHLEQQEGQLKHPEQQEGQLELPEQQEGQLELPEQQ 199
Query: 238 QIPVQLNAGQLQYIRLAQPVSGT----QVVQGQIQTLATNAQQITQTEVQQGQQQFSQFT 293
+ ++L Q + L + G + +GQ++ Q+ +E Q+GQ + S+
Sbjct: 200 EGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPQQQEGQLELSEQQEGQLELSEQQ 259
Query: 294 DGQLYQIQ 301
+GQL ++
Sbjct: 260 EGQLKHLE 267
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 46.2 bits (108), Expect = 4e-05
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 10/211 (4%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQI 178
P+ + P Q + Q ++P P L AV +Q Q G P +
Sbjct: 3773 PQGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQVAV-LQQQHPGALGPQG-----PHRQ 3826
Query: 179 IIAQPQQGQTTPVTMQVGEGQQV-QIVQAQPQGQAQQ-AQSGTGQTMQVMQQIITNTGEI 236
++ + ++P Q G+G ++V AQ Q Q QQ Q G+ + +QQ + +
Sbjct: 3827 VLMTQSRVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQ 3886
Query: 237 QQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFS-QFTDG 295
++ Q G LQ ++ Q + Q +Q Q Q QQ+ Q ++QQ QQQ Q
Sbjct: 3887 PKLSAQ-PMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQ 3945
Query: 296 QLYQIQQVTMPAGQDLAQPMFIQSANQPSDG 326
Q Q QQ + Q Q F Q Q G
Sbjct: 3946 QQLQQQQQQLQQQQQQQQQQFQQQQQQQQMG 3976
Score = 46.2 bits (108), Expect = 4e-05
Identities = 62/197 (31%), Positives = 77/197 (39%), Gaps = 34/197 (17%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQP---------TAVQVQGQQQGQQTTSSTTTIQPG 176
P RQ + QS + P LAQQ TA Q Q QQQ QQ S
Sbjct: 3823 PHRQVLMTQSRVLSSP-----QLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQ 3877
Query: 177 QIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEI 236
Q +++ GQ +G QQ+Q Q Q Q QQ Q Q +Q QQ+ +
Sbjct: 3878 QSLMSH--SGQPKLSAQPMGSLQQLQ--QQQQLQQQQQLQQQQQQQLQQQQQL-----QQ 3928
Query: 237 QQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQ 296
QQ+ Q QLQ Q Q Q+Q QQ Q + QQ QQQ Q G
Sbjct: 3929 QQLQQQQQQQQLQ-----------QQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGL 3977
Query: 297 LYQIQQVTMPAGQDLAQ 313
L Q + + P Q Q
Sbjct: 3978 LNQSRTLLSPQQQQQQQ 3994
Score = 35.4 bits (80), Expect = 0.072
Identities = 32/99 (32%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
QQ Q Q QQQ QQ +Q Q+ Q QQ +Q + QQ+Q Q Q Q
Sbjct: 3903 QQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQ------QLQQQQQQQLQQQQQQLQ 3956
Query: 210 GQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQL 248
Q QQ Q Q Q Q + N P Q Q+
Sbjct: 3957 QQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQV 3995
Score = 34.3 bits (77), Expect = 0.16
Identities = 67/272 (24%), Positives = 96/272 (35%), Gaps = 33/272 (12%)
Query: 86 IHTEDNKRRTLQRNDIAMAITKFDQFDF-LIDIVPRDELKPPKRQEEVRQSVTPAEPVQY 144
+H + K ++ A +F + D + +V + K K+ ++VR+ +
Sbjct: 3534 VHRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTEQQSKIQKQLDQVRKQQKEHTNLMA 3593
Query: 145 YFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQ---IIIAQPQQGQTTP----VTMQVGE 197
+ QQ Q Q QQQ QQ S+ + P Q ++ P GQ P Q
Sbjct: 3594 EYRNKQQQ---QQQQQQQQQQQHSAVLALSPSQSPRLLTKLP--GQLLPGHGLQPPQGPP 3648
Query: 198 GQQVQIVQAQPQGQAQQAQSG-----TGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIR 252
G Q ++ P G A Q G T Q QQ G + G L
Sbjct: 3649 GGQAGGLRLTPGGMALPGQPGGPFLNTALAQQQQQQHSGGAGSLAGPSGGFFPGNLALRS 3708
Query: 253 LAQPVSGTQVVQGQIQTLATN-AQQITQTEVQQGQQQF--------SQFTDGQLYQIQQV 303
L Q Q Q+Q AQ++ Q + QQ QQQ Q G Q Q
Sbjct: 3709 LGPDSRLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQA 3768
Query: 304 TMPAGQDLAQP-----MFIQSANQPSDGQAPQ 330
P Q L P + +Q + P Q PQ
Sbjct: 3769 LGPKPQGLMPPSSHQGLLVQQLS-PQPPQGPQ 3799
Score = 32.3 bits (72), Expect = 0.61
Identities = 53/232 (22%), Positives = 85/232 (36%), Gaps = 29/232 (12%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTT-IQPGQ 177
P L+ ++Q++++Q + Q QQ Q+Q QQQ QQ +Q Q
Sbjct: 3893 PMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQ 3952
Query: 178 IIIAQPQQGQTTPVTMQVGEGQ-----QVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITN 232
+ Q QQ Q Q + Q Q + + + Q Q QQ G G + +Q ++
Sbjct: 3953 QQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAKPLQH-FSS 4011
Query: 233 TGEIQQIPVQLNAGQLQY----IRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQ 288
G + P L G+ Q ++ G QG + T + + + G+ +
Sbjct: 4012 PGALG--PTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAIGTTPESMA---TEPGEVK 4066
Query: 289 FSQFTDGQLYQIQQVTMP-------------AGQDLAQPMFIQSANQPSDGQ 327
S D QL +Q P GQ Q + +A S GQ
Sbjct: 4067 PSLSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQ 4118
>gi|93141033 PAX interacting protein 1 [Homo sapiens]
Length = 1069
Score = 45.4 bits (106), Expect = 7e-05
Identities = 56/186 (30%), Positives = 71/186 (38%), Gaps = 26/186 (13%)
Query: 152 PTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQ 211
P +Q QQQ QQ Q ++ QPQQ MQ+ + QQ QI Q QP Q
Sbjct: 396 PETHMLQQQQQAQQQQ------QQHPVLHLQPQQ------IMQLQQQQQQQISQ-QPYPQ 442
Query: 212 A-------QQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQ 264
QQ Q Q QQ + + P QL+ Q Q QP +Q
Sbjct: 443 QPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQQQL----QPFQQQHALQ 498
Query: 265 GQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQPMFIQSANQPS 324
Q L + Q+ Q ++ Q QQQ S Q QIQQ + Q +QS P
Sbjct: 499 QQFHQLQQH--QLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQQMQSQTAPH 556
Query: 325 DGQAPQ 330
Q Q
Sbjct: 557 LSQTSQ 562
Score = 44.7 bits (104), Expect = 1e-04
Identities = 57/194 (29%), Positives = 70/194 (36%), Gaps = 16/194 (8%)
Query: 155 VQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTT---PVTMQVGEG---QQVQIVQAQP 208
+Q Q Q Q QQ +QP QI+ Q QQ Q P Q QQ Q QA P
Sbjct: 401 LQQQQQAQQQQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHP 460
Query: 209 QGQAQQAQSGTGQTMQVMQQI---------ITNTGEIQQIPVQLNAGQLQYIRLAQPVSG 259
+QQ Q + QQ+ +QQ QL QLQ +LAQ
Sbjct: 461 HQFSQQQLQFPQQQLHPPQQLHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQ 520
Query: 260 TQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQPMFIQS 319
++Q Q Q QQ+ + QQ QQQ T L Q Q P Q
Sbjct: 521 HSLLQQQ-QQQQIQQQQLQRMHQQQQQQQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQ 579
Query: 320 ANQPSDGQAPQVTG 333
P Q Q+ G
Sbjct: 580 QQPPPSPQQHQLFG 593
Score = 38.9 bits (89), Expect = 0.007
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEP----VQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQ 174
P+ +L+P ++Q ++Q + Q L QQ + +Q Q QQQ QQ Q
Sbjct: 484 PQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQ 543
Query: 175 PGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQ 216
Q Q Q QT P Q + Q Q+ QP Q QQ Q
Sbjct: 544 QQQ----QQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQQQ 581
Score = 33.9 bits (76), Expect = 0.21
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQI 178
P+ +L PP++ +Q + +P Q L QQ +Q Q Q Q QQ +Q
Sbjct: 471 PQQQLHPPQQLHRPQQQL---QPFQQQHALQQQFHQLQ-QHQLQQQQLAQ----LQQQHS 522
Query: 179 IIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSG--TGQTMQVMQ 227
++ Q QQ Q + QQ+Q + Q Q Q Q+Q+ QT Q +Q
Sbjct: 523 LLQQQQQQQI--------QQQQLQRMHQQQQQQQMQSQTAPHLSQTSQALQ 565
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 45.4 bits (106), Expect = 7e-05
Identities = 56/218 (25%), Positives = 84/218 (38%), Gaps = 30/218 (13%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P ++V + +PV T P V Q+ + +ST+ IQ +PQQ
Sbjct: 2212 PGAPQQVMTQIIRGQPVS---TAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRPQQ 2268
Query: 186 GQTTPVTMQVGE------GQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQI 239
GQ Q+ + G Q V Q QGQ TGQ + Q + G QQ+
Sbjct: 2269 GQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQT------TGQLQLIPQGVTVLPGPGQQL 2322
Query: 240 -PVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLY 298
+ G +Q L P++ T T +T ++ T G+Q+ S+ + Q+
Sbjct: 2323 MQAAMPNGTVQRF-LFTPLATTAT------TASTTTTTVSTTAAGTGEQRQSKLSP-QMQ 2374
Query: 299 QIQQVTMPAGQDL------AQPMFIQSANQPSDGQAPQ 330
Q T+P Q AQP Q + QP PQ
Sbjct: 2375 VHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQ 2412
Score = 32.7 bits (73), Expect = 0.47
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTP-----VTMQVGEGQQVQIV 204
Q+PT + T+S+T+TI P Q ++ P G T +T +VG V
Sbjct: 2049 QKPTVIATSTTSP---TSSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQ 2105
Query: 205 QAQPQGQ-----AQQAQSGTGQTMQVMQQII----TNTGEIQQ 238
Q + Q +Q QS +G +QV Q+++ ++TG QQ
Sbjct: 2106 QNKNFHQTFATWVKQGQSNSG-VVQVQQKVLGIIPSSTGTSQQ 2147
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 45.4 bits (106), Expect = 7e-05
Identities = 56/218 (25%), Positives = 84/218 (38%), Gaps = 30/218 (13%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P ++V + +PV T P V Q+ + +ST+ IQ +PQQ
Sbjct: 2086 PGAPQQVMTQIIRGQPVS---TAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRPQQ 2142
Query: 186 GQTTPVTMQVGE------GQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQI 239
GQ Q+ + G Q V Q QGQ TGQ + Q + G QQ+
Sbjct: 2143 GQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQT------TGQLQLIPQGVTVLPGPGQQL 2196
Query: 240 -PVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLY 298
+ G +Q L P++ T T +T ++ T G+Q+ S+ + Q+
Sbjct: 2197 MQAAMPNGTVQRF-LFTPLATTAT------TASTTTTTVSTTAAGTGEQRQSKLSP-QMQ 2248
Query: 299 QIQQVTMPAGQDL------AQPMFIQSANQPSDGQAPQ 330
Q T+P Q AQP Q + QP PQ
Sbjct: 2249 VHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQ 2286
Score = 43.5 bits (101), Expect = 3e-04
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQ-QTTSSTTTIQPGQ----III 180
P +Q +V+ + + P+Q + +L + QGQ Q Q Q SST T+ GQ + +
Sbjct: 2361 PGQQSQVQTTTSQPIPIQPHTSLQ-----IPSQGQPQSQPQVQSSTQTLSSGQTLNQVTV 2415
Query: 181 AQP-----QQGQTTPVTMQVGE-GQQVQI---VQAQPQGQAQQAQSGTGQTMQVMQQIIT 231
+ P Q Q P + V + QQVQ+ +Q+Q Q Q QSG Q +++
Sbjct: 2416 SSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKL------ 2469
Query: 232 NTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQ 288
Q+P+Q+ Q ++ Q + V +Q QQ+ + ++ QQQ
Sbjct: 2470 ------QLPIQIQ--QSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQQQ 2518
Score = 38.9 bits (89), Expect = 0.007
Identities = 53/206 (25%), Positives = 81/206 (39%), Gaps = 31/206 (15%)
Query: 125 PPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQ 184
P + + + + V V + QPT Q Q Q+ + + + P
Sbjct: 2288 PAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPS 2347
Query: 185 QGQ---TTPVTMQVGEGQQVQIVQAQP-------------QGQAQ---QAQSGTGQTM-- 223
Q + +TP + G+ QVQ +QP QGQ Q Q QS T QT+
Sbjct: 2348 QTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSST-QTLSS 2406
Query: 224 -QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEV 282
Q + Q+ ++ Q+ Q+ Q Q I + Q QV+ QIQ+ Q Q+ V
Sbjct: 2407 GQTLNQVTVSSPSRPQL--QIQQPQPQVIAVPQLQQQVQVL-SQIQSQVVAQIQAQQSGV 2463
Query: 283 QQGQQ-----QFSQFTDGQLYQIQQV 303
Q + Q Q + Q +QIQ V
Sbjct: 2464 PQQIKLQLPIQIQQSSAVQTHQIQNV 2489
Score = 32.7 bits (73), Expect = 0.47
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTP-----VTMQVGEGQQVQIV 204
Q+PT + T+S+T+TI P Q ++ P G T +T +VG V
Sbjct: 1923 QKPTVIATSTTSP---TSSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQ 1979
Query: 205 QAQPQGQ-----AQQAQSGTGQTMQVMQQII----TNTGEIQQ 238
Q + Q +Q QS +G +QV Q+++ ++TG QQ
Sbjct: 1980 QNKNFHQTFATWVKQGQSNSG-VVQVQQKVLGIIPSSTGTSQQ 2021
>gi|38570099 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 45.1 bits (105), Expect = 9e-05
Identities = 64/245 (26%), Positives = 93/245 (37%), Gaps = 40/245 (16%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAV------------------QVQGQQQGQQTT 167
P+ Q+E + V + VQ + Q P V QVQ Q QGQ
Sbjct: 86 PQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQIQGQAPQ 145
Query: 168 SSTTTIQPGQIIIAQPQQGQTTPVTMQ-VGEGQQVQIVQAQPQ---GQAQQAQSGTGQTM 223
S+ +IQ + P Q Q + +Q V QQ+Q + + Q QAQ GQ++
Sbjct: 146 SAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAGQSL 205
Query: 224 QVMQQI-ITNTGEIQQIPVQLNAGQLQYIRLA-----QPVSGTQVVQGQIQTLATNAQQI 277
QQI I G + P Q + + R+ QPV +V + A + Q +
Sbjct: 206 AGGQQIQIQTVGALSPPPSQQGSPREGERRVGTASVLQPVKKRKVDMPITVSYAISGQPV 265
Query: 278 -TQTEVQQGQQQ--------FSQFTDGQLYQIQ-QVTMPAGQDLAQPMFIQSANQPSDGQ 327
T + QGQQQ LY +T P G+ P++ SA D Q
Sbjct: 266 ATVLAIPQGQQQSYVSLRPDLLTVDSAHLYSATGTITSPTGETWTIPVY--SAQPRGDPQ 323
Query: 328 APQVT 332
+T
Sbjct: 324 QQSIT 328
Score = 37.0 bits (84), Expect = 0.025
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 34/200 (17%)
Query: 141 PVQYYFTLAQQPTAVQV---QGQQQGQQTTSSTTTIQPGQIIIAQPQ-QGQTTPVTMQVG 196
P+ + ++ QP A + QGQQQ S +++P + + T +T G
Sbjct: 253 PITVSYAISGQPVATVLAIPQGQQQ------SYVSLRPDLLTVDSAHLYSATGTITSPTG 306
Query: 197 EGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQP 256
E + + AQP+G QQ T + Q N + P L A +L+ + +
Sbjct: 307 ETWTIPVYSAQPRGDPQQQSI----THIAIPQEAYNAVHVSGSPTALAAVKLEDDK-EKM 361
Query: 257 VSGTQVVQGQ----IQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAG--QD 310
V T VV+ +QTLA + +QF +G ++ V AG Q+
Sbjct: 362 VGTTSVVKNSHEEVVQTLANSLFP-------------AQFMNGNIHIPVAVQAVAGTYQN 408
Query: 311 LAQPMFIQSANQPSDGQAPQ 330
AQ + I Q Q PQ
Sbjct: 409 TAQTVHIWDPQQQPQQQTPQ 428
Score = 36.2 bits (82), Expect = 0.042
Identities = 48/171 (28%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
Query: 151 QPTAVQVQGQQQGQQTTSSTTTIQPGQII-IAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
Q TA QQG + +T G ++ +A P P T Q + Q Q Q Q Q
Sbjct: 46 QQTATTTMVYQQGGNCIYTDSTEVAGSLLELACPVTTSVQPQTQQEQQIQVQQPQQVQVQ 105
Query: 210 GQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQT 269
Q QQ+ + + T + Q+ VQ+ Q Q + A P T +Q +
Sbjct: 106 VQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQI---QGQAPQSAAPSIQTPSLQSPSPS 162
Query: 270 LATNAQQITQTEVQQGQQ-QFSQFTDGQL-YQIQQVTMPAGQDLAQPMFIQ 318
A QI VQ QQ Q ++ + + +Q Q + AGQ LA IQ
Sbjct: 163 -QLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAGQSLAGGQQIQ 212
>gi|38570097 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 45.1 bits (105), Expect = 9e-05
Identities = 64/245 (26%), Positives = 93/245 (37%), Gaps = 40/245 (16%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAV------------------QVQGQQQGQQTT 167
P+ Q+E + V + VQ + Q P V QVQ Q QGQ
Sbjct: 86 PQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQIQGQAPQ 145
Query: 168 SSTTTIQPGQIIIAQPQQGQTTPVTMQ-VGEGQQVQIVQAQPQ---GQAQQAQSGTGQTM 223
S+ +IQ + P Q Q + +Q V QQ+Q + + Q QAQ GQ++
Sbjct: 146 SAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAGQSL 205
Query: 224 QVMQQI-ITNTGEIQQIPVQLNAGQLQYIRLA-----QPVSGTQVVQGQIQTLATNAQQI 277
QQI I G + P Q + + R+ QPV +V + A + Q +
Sbjct: 206 AGGQQIQIQTVGALSPPPSQQGSPREGERRVGTASVLQPVKKRKVDMPITVSYAISGQPV 265
Query: 278 -TQTEVQQGQQQ--------FSQFTDGQLYQIQ-QVTMPAGQDLAQPMFIQSANQPSDGQ 327
T + QGQQQ LY +T P G+ P++ SA D Q
Sbjct: 266 ATVLAIPQGQQQSYVSLRPDLLTVDSAHLYSATGTITSPTGETWTIPVY--SAQPRGDPQ 323
Query: 328 APQVT 332
+T
Sbjct: 324 QQSIT 328
Score = 37.0 bits (84), Expect = 0.025
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 34/200 (17%)
Query: 141 PVQYYFTLAQQPTAVQV---QGQQQGQQTTSSTTTIQPGQIIIAQPQ-QGQTTPVTMQVG 196
P+ + ++ QP A + QGQQQ S +++P + + T +T G
Sbjct: 253 PITVSYAISGQPVATVLAIPQGQQQ------SYVSLRPDLLTVDSAHLYSATGTITSPTG 306
Query: 197 EGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQP 256
E + + AQP+G QQ T + Q N + P L A +L+ + +
Sbjct: 307 ETWTIPVYSAQPRGDPQQQSI----THIAIPQEAYNAVHVSGSPTALAAVKLEDDK-EKM 361
Query: 257 VSGTQVVQGQ----IQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAG--QD 310
V T VV+ +QTLA + +QF +G ++ V AG Q+
Sbjct: 362 VGTTSVVKNSHEEVVQTLANSLFP-------------AQFMNGNIHIPVAVQAVAGTYQN 408
Query: 311 LAQPMFIQSANQPSDGQAPQ 330
AQ + I Q Q PQ
Sbjct: 409 TAQTVHIWDPQQQPQQQTPQ 428
Score = 36.2 bits (82), Expect = 0.042
Identities = 48/171 (28%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
Query: 151 QPTAVQVQGQQQGQQTTSSTTTIQPGQII-IAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
Q TA QQG + +T G ++ +A P P T Q + Q Q Q Q Q
Sbjct: 46 QQTATTTMVYQQGGNCIYTDSTEVAGSLLELACPVTTSVQPQTQQEQQIQVQQPQQVQVQ 105
Query: 210 GQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQT 269
Q QQ+ + + T + Q+ VQ+ Q Q + A P T +Q +
Sbjct: 106 VQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQI---QGQAPQSAAPSIQTPSLQSPSPS 162
Query: 270 LATNAQQITQTEVQQGQQ-QFSQFTDGQL-YQIQQVTMPAGQDLAQPMFIQ 318
A QI VQ QQ Q ++ + + +Q Q + AGQ LA IQ
Sbjct: 163 -QLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAGQSLAGGQQIQ 212
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 43.5 bits (101), Expect = 3e-04
Identities = 51/196 (26%), Positives = 78/196 (39%), Gaps = 22/196 (11%)
Query: 128 RQEEVRQSVTPAEPVQYYFTLAQQPTA-VQVQGQQQGQQTTSSTTTI---QPGQIIIAQP 183
+ ++ + + P P + QPTA VQVQ Q QQ + TT+ +PG ++
Sbjct: 2782 KMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTG-- 2839
Query: 184 QQGQTTPVTMQVGEGQQVQIVQAQPQGQAQ-------QAQSGTGQTMQVMQQIITNTGEI 236
TT +QV +V Q Q QGQ Q Q + V ++++ G +
Sbjct: 2840 ----TTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPG-V 2894
Query: 237 QQIPVQLNAGQLQYIRLAQPVSGTQVVQGQI---QTLATNAQQITQTEVQQGQQQFSQFT 293
+P+ + AG I Q +G VV + Q L Q + Q + Q Q
Sbjct: 2895 TTLPMNV-AGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAA 2953
Query: 294 DGQLYQIQQVTMPAGQ 309
Q QQ+T P Q
Sbjct: 2954 VQQKITAQQITTPGAQ 2969
Score = 41.2 bits (95), Expect = 0.001
Identities = 56/198 (28%), Positives = 75/198 (37%), Gaps = 13/198 (6%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P Q + + + P LA+ P T+ + + I QPQ+
Sbjct: 2854 PTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQK 2913
Query: 186 --GQTT---PVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
GQT PV MQ + Q VQ Q Q Q AQ ++ Q IT G Q++
Sbjct: 2914 AAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVA 2973
Query: 241 VQLN-AGQLQY----IRLAQPVSGTQVVQGQIQT--LATNAQQITQTEVQQGQQQFSQFT 293
A + Q+ I AQ ++G Q VQ QIQ L QQ T Q SQ
Sbjct: 2974 YAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQA 3033
Query: 294 DGQLYQIQQVTMPAGQDL 311
Q + Q T AGQ +
Sbjct: 3034 SPQTVALTQAT-AAGQQV 3050
Score = 33.1 bits (74), Expect = 0.36
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 118 VPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQ 177
+ ++ P Q++V + PA Q+ T Q A ++ G QQ Q T IQ +
Sbjct: 2958 ITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQ--AQKLAGAQQVQ------TQIQVAK 3009
Query: 178 IIIAQPQQGQTTPVT--MQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGE 235
+ QQ TPV QV Q QA PQ A + GQ +Q++ +
Sbjct: 3010 LPQVVQQQ---TPVASIQQVASASQ----QASPQTVALTQATAAGQQVQMIPAVTATAQV 3062
Query: 236 IQQIPVQ 242
+QQ +Q
Sbjct: 3063 VQQKLIQ 3069
Score = 32.7 bits (73), Expect = 0.47
Identities = 51/173 (29%), Positives = 63/173 (36%), Gaps = 13/173 (7%)
Query: 135 SVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQ 194
SVT + V T Q P V Q TI P + + QQ Q Q
Sbjct: 2671 SVTASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQ 2730
Query: 195 VGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA-GQLQYIRL 253
+ QQ Q Q Q QQ Q+ T +QV Q G+ Q P Q+ A G+L L
Sbjct: 2731 QQQQQQQQQQQ-----QQQQQQTTTTSQVQVPQ----IQGQAQS-PAQIKAVGKLTPEHL 2780
Query: 254 AQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMP 306
+ Q +Q Q AQ Q Q Q SQ Q Q+ VT P
Sbjct: 2781 IK--MQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAP 2831
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 43.1 bits (100), Expect = 3e-04
Identities = 59/216 (27%), Positives = 81/216 (37%), Gaps = 33/216 (15%)
Query: 119 PRDELKPPKRQEEVRQSVTPA------EPVQYYFTLAQQPTA-VQVQGQQQGQQTTSSTT 171
P + PP + QS P+ +P ++ L Q+P+ V Q G TS+
Sbjct: 1959 PAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRH---LQQRPSGYVHQQAPTYGHGLTSTQR 2015
Query: 172 TIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIIT 231
Q + P TP++ Q G V+ P+ Q QQ Q Q Q QQ
Sbjct: 2016 FSH--QTLQQTPMISTMTPMSAQ-GVQAGVRSTAILPEQQQQQQQQQQQQQQQQQQQ--- 2069
Query: 232 NTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQ 291
Q Q +IR Q Q+++ Q Q QQ Q + QQ QQQ Q
Sbjct: 2070 ----------QQQQQQQYHIRQQQQ---QQILRQQQQ----QQQQQQQQQQQQQQQQQQQ 2112
Query: 292 FTDGQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQ 327
Q Q QQ P Q +QP F + Q + Q
Sbjct: 2113 QQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQ 2148
Score = 40.0 bits (92), Expect = 0.003
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 14/123 (11%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQG 186
++Q++ +Q + QY+ QQ ++ Q QQQ QQ Q QQ
Sbjct: 2060 QQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQ----------QQQQQQ 2109
Query: 187 QTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAG 246
Q Q + QQ Q QPQ Q Q + G QT Q Q ++Q+ QL+
Sbjct: 2110 QQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQ----TAALVRQLQQQLSNT 2165
Query: 247 QLQ 249
Q Q
Sbjct: 2166 QPQ 2168
Score = 37.7 bits (86), Expect = 0.014
Identities = 39/127 (30%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 156 QVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQA 215
Q Q QQQ QQ Q Q I Q QQ Q QQ Q Q Q Q Q QQ
Sbjct: 2055 QQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILR--------QQQQQQQQQQQQQQQQQ 2106
Query: 216 QSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ 275
Q Q Q QQ Q P Q Q ++ Q T + Q+Q +N Q
Sbjct: 2107 QQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQLSNTQ 2166
Query: 276 QITQTEV 282
T +
Sbjct: 2167 PQPSTNI 2173
Score = 36.2 bits (82), Expect = 0.042
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
QQ Q Q QQQ QQ Q QI+ Q QQ Q Q + QQ Q Q Q
Sbjct: 2059 QQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQ 2118
Query: 210 GQAQQAQSGTGQTM---QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV 262
Q QQA Q Q +Q + T + QQ + Q Q + QP T +
Sbjct: 2119 QQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQ-QQLSNTQPQPSTNI 2173
Score = 29.6 bits (65), Expect = 3.9
Identities = 32/127 (25%), Positives = 43/127 (33%), Gaps = 11/127 (8%)
Query: 204 VQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVV 263
+Q +P G Q G + Q+ T +QQ P+ I P+S V
Sbjct: 1991 LQQRPSGYVHQQAPTYGHGLTSTQRFSHQT--LQQTPM---------ISTMTPMSAQGVQ 2039
Query: 264 QGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQPMFIQSANQP 323
G T QQ Q + QQ QQQ Q Q Q + Q + + Q Q
Sbjct: 2040 AGVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQ 2099
Query: 324 SDGQAPQ 330
Q Q
Sbjct: 2100 QQQQQQQ 2106
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 42.0 bits (97), Expect = 8e-04
Identities = 46/163 (28%), Positives = 60/163 (36%), Gaps = 16/163 (9%)
Query: 182 QPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPV 241
+P+QG T P+ + Q+ P T Q Q QQ + QQ
Sbjct: 550 EPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQ----QQQQQQQQQ 605
Query: 242 QLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQ 301
Q Q Q + Q S Q Q Q + +AQQ Q + QQ QQQ Q Q Q Q
Sbjct: 606 QQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQ 665
Query: 302 QVTMPAGQDLAQP------------MFIQSANQPSDGQAPQVT 332
+ PA +QP + Q NQP G QV+
Sbjct: 666 PSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVS 708
Score = 38.1 bits (87), Expect = 0.011
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
QQ Q Q QQQ QQ++ I AQ QQ Q + ++ Q + QQ Q Q Q Q
Sbjct: 606 QQQQQQQQQQQQQQQQSS-----------ISAQQQQQQQSSISAQQQQQQQQQQQQQQQQ 654
Query: 210 GQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGT--QVVQGQI 267
Q QQ Q + Q Q + + + + P+ L L QP++G QV Q Q
Sbjct: 655 QQQQQQQQQQQPSSQPAQSLPSQ--PLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQR 712
Query: 268 Q 268
Q
Sbjct: 713 Q 713
Score = 35.0 bits (79), Expect = 0.094
Identities = 43/178 (24%), Positives = 64/178 (35%), Gaps = 25/178 (14%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQP--- 183
++Q++ + S++ + Q QQ Q Q QQQ QQ +S P Q ++ P
Sbjct: 627 QQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPL 686
Query: 184 ------QQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQ 237
QQ Q P+ G G QV Q Q Q +G + T +G +
Sbjct: 687 QQKLLLQQMQNQPI---AGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMN 743
Query: 238 QIPVQLNAGQLQYIRLAQPVSGTQVVQGQI----QTLATNAQQITQTEVQQGQQQFSQ 291
LN Q + Q +Q QI Q L Q + E Q Q ++
Sbjct: 744 SQQSLLN---------QQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIAPQDQINR 792
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 42.0 bits (97), Expect = 8e-04
Identities = 44/153 (28%), Positives = 52/153 (33%), Gaps = 8/153 (5%)
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA 245
GQ P T + + A PQ Q Q Q Q Q Q +QQ Q
Sbjct: 127 GQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQ 186
Query: 246 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ--------ITQTEVQQGQQQFSQFTDGQL 297
Q Q + A VVQ Q Q QQ Q ++QQ QQQ + QL
Sbjct: 187 QQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQL 246
Query: 298 YQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQ 330
Q QQ Q Q + Q Q Q PQ
Sbjct: 247 QQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQ 279
Score = 40.0 bits (92), Expect = 0.003
Identities = 59/215 (27%), Positives = 82/215 (38%), Gaps = 19/215 (8%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ 182
L+ ++Q++ +Q +Q F Q Q Q QQQ QQ Q I Q
Sbjct: 177 LQQQQQQQQQQQFQAQQSAMQQQFQAVVQQ---QQQLQQQQQQQQHLIKLHHQNQQQIQQ 233
Query: 183 PQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQ 242
QQ +Q+ + QQ Q Q Q Q QA QAQ Q MQQ Q +P Q
Sbjct: 234 QQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQ--PPMQQ--PQPPPSQALPQQ 289
Query: 243 LNAGQLQYIRLAQPVSGTQ---VVQGQIQTLATNAQQ---ITQTEVQQGQQQFSQFTDGQ 296
L Q+ + + QP Q V Q Q L +Q ++Q + GQ ++Q
Sbjct: 290 LQ--QMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQ----P 343
Query: 297 LYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQV 331
+ + M Q QP Q QA Q+
Sbjct: 344 PLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQM 378
Score = 39.7 bits (91), Expect = 0.004
Identities = 56/210 (26%), Positives = 74/210 (35%), Gaps = 24/210 (11%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P+ Q +++Q + Q F QQ Q Q QQQ QQ + + +Q QQ
Sbjct: 149 PQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQ---------QQ 199
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA 245
Q V + QQ+Q Q Q Q + Q Q QQ+ Q QL
Sbjct: 200 FQAV-----VQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQL--------QRIAQLQL 246
Query: 246 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQ--IQQV 303
Q Q + Q Q +Q Q QQ Q QQ Q Q +Q Q
Sbjct: 247 QQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQ 306
Query: 304 TMPAGQDLAQPMFIQSANQPSDGQAPQVTG 333
P Q+ + QS QP QA + G
Sbjct: 307 QPPVAQNQPSQLPPQSQTQPLVSQAQALPG 336
Score = 36.2 bits (82), Expect = 0.042
Identities = 59/232 (25%), Positives = 81/232 (34%), Gaps = 40/232 (17%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQ--QGQQTTSSTTTIQPGQIIIAQ-- 182
++Q++ +Q++ P+Q QP Q QQ Q T QP Q +AQ
Sbjct: 255 QQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQ 314
Query: 183 ----PQQGQTTPVTMQVGE--GQQ---------------VQIVQAQPQGQAQQAQSGTGQ 221
P Q QT P+ Q GQ VQ QPQ Q QQ T Q
Sbjct: 315 PSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQ 374
Query: 222 TMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTE 281
Q++ +Q I L G + P + + ++ Q + Q
Sbjct: 375 AAQMV------APGVQMITEALAQGGMHIRARFPPTTAVSAIPS--SSIPLGRQPMAQVS 426
Query: 282 VQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQPMFIQSANQP----SDGQAP 329
Q S + GQ Q Q P Q QP Q ++QP S G AP
Sbjct: 427 -QSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPG--QPSSQPNSNVSSGPAP 475
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 42.0 bits (97), Expect = 8e-04
Identities = 44/153 (28%), Positives = 52/153 (33%), Gaps = 8/153 (5%)
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA 245
GQ P T + + A PQ Q Q Q Q Q Q +QQ Q
Sbjct: 127 GQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQ 186
Query: 246 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ--------ITQTEVQQGQQQFSQFTDGQL 297
Q Q + A VVQ Q Q QQ Q ++QQ QQQ + QL
Sbjct: 187 QQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQL 246
Query: 298 YQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQ 330
Q QQ Q Q + Q Q Q PQ
Sbjct: 247 QQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQ 279
Score = 40.0 bits (92), Expect = 0.003
Identities = 59/215 (27%), Positives = 82/215 (38%), Gaps = 19/215 (8%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ 182
L+ ++Q++ +Q +Q F Q Q Q QQQ QQ Q I Q
Sbjct: 177 LQQQQQQQQQQQFQAQQSAMQQQFQAVVQQ---QQQLQQQQQQQQHLIKLHHQNQQQIQQ 233
Query: 183 PQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQ 242
QQ +Q+ + QQ Q Q Q Q QA QAQ Q MQQ Q +P Q
Sbjct: 234 QQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQ--PPMQQ--PQPPPSQALPQQ 289
Query: 243 LNAGQLQYIRLAQPVSGTQ---VVQGQIQTLATNAQQ---ITQTEVQQGQQQFSQFTDGQ 296
L Q+ + + QP Q V Q Q L +Q ++Q + GQ ++Q
Sbjct: 290 LQ--QMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQ----P 343
Query: 297 LYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQV 331
+ + M Q QP Q QA Q+
Sbjct: 344 PLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQM 378
Score = 39.7 bits (91), Expect = 0.004
Identities = 56/210 (26%), Positives = 74/210 (35%), Gaps = 24/210 (11%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P+ Q +++Q + Q F QQ Q Q QQQ QQ + + +Q QQ
Sbjct: 149 PQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQ---------QQ 199
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA 245
Q V + QQ+Q Q Q Q + Q Q QQ+ Q QL
Sbjct: 200 FQAV-----VQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQL--------QRIAQLQL 246
Query: 246 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQ--IQQV 303
Q Q + Q Q +Q Q QQ Q QQ Q Q +Q Q
Sbjct: 247 QQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQ 306
Query: 304 TMPAGQDLAQPMFIQSANQPSDGQAPQVTG 333
P Q+ + QS QP QA + G
Sbjct: 307 QPPVAQNQPSQLPPQSQTQPLVSQAQALPG 336
Score = 36.2 bits (82), Expect = 0.042
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 17/106 (16%)
Query: 125 PPKRQEEVRQSVTPAEPVQYYFT------------LAQQPTAVQVQGQQQGQQTTSSTTT 172
PP+ Q + S A P Q +T + Q P QVQ QQ QT +
Sbjct: 319 PPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQM 378
Query: 173 IQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSG 218
+ PG + ++Q + P+ GQQVQ Q+ P Q G
Sbjct: 379 VAPG-VQVSQ----SSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPG 419
Score = 30.0 bits (66), Expect = 3.0
Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 25/125 (20%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQ--QGQQTTSSTTTIQPGQIIIAQ-- 182
++Q++ +Q++ P+Q QP Q QQ Q T QP Q +AQ
Sbjct: 255 QQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQ 314
Query: 183 ----PQQGQTTPVTMQVGE--GQQ---------------VQIVQAQPQGQAQQAQSGTGQ 221
P Q QT P+ Q GQ VQ QPQ Q QQ T Q
Sbjct: 315 PSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQ 374
Query: 222 TMQVM 226
Q++
Sbjct: 375 AAQMV 379
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 41.6 bits (96), Expect = 0.001
Identities = 59/214 (27%), Positives = 70/214 (32%), Gaps = 49/214 (22%)
Query: 119 PRDELKP--PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPG 176
P+ + P P Q + +Q P P Q T AQ A Q Q Q QQ
Sbjct: 418 PKPQAPPSQPLPQTQAKQPQAPPTPQQTPSTQAQGLPA-QAQATPQHQQ----------- 465
Query: 177 QIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEI 236
Q+ + Q QQ Q P Q G Q Q Q Q QQ Q+ T Q I
Sbjct: 466 QLFLKQQQQQQQPPPAQQQPAGTFYQ----QQQAQTQQFQAVHPATQQPA---------I 512
Query: 237 QQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQ 296
Q PV G Q + Q Q + QQ QQQ Q
Sbjct: 513 AQFPVVSQGGSQQQLM----------------------QNFYQQQQQQQQQQQQQQLATA 550
Query: 297 LYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQ 330
L+Q Q +T A M QP APQ
Sbjct: 551 LHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAPQ 584
>gi|62865633 Sp3 transcription factor isoform 2 [Homo sapiens]
Length = 713
Score = 40.8 bits (94), Expect = 0.002
Identities = 60/217 (27%), Positives = 88/217 (40%), Gaps = 47/217 (21%)
Query: 164 QQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQA-------------QPQG 210
QQ T+S TT GQ+ + Q + + Q +Q+ A QP
Sbjct: 282 QQNTNSLTT-SSGQVHSSDLQGNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPTS 340
Query: 211 QAQQAQSGTGQTMQVMQQIITNTGE--IQQIPVQLNAG----QLQYIRLAQPVS-GTQVV 263
QAQ Q T QT+ +Q N + +Q + +QLN G Q Q + + V+ T V
Sbjct: 341 QAQIVQGITPQTIHGVQASGQNISQQALQNLQLQLNPGTFLIQAQTVTPSGQVTWQTFQV 400
Query: 264 QG-----QIQTLATNAQQITQTEVQQ---GQQQFS--------QFTDGQLYQIQQVTMPA 307
QG +Q T AQQIT T VQ GQ + GQL +Q VT+ +
Sbjct: 401 QGVQNLQNLQIQNTAAQQITLTPVQTLTLGQVAAGGAFTSTPVSLSTGQLPNLQTVTVNS 460
Query: 308 ----------GQDLAQPMFIQSANQPSDGQAPQVTGD 334
G++ P I+ + D + Q++GD
Sbjct: 461 IDSAGIQLHPGENADSPADIRIKEEEPDPEEWQLSGD 497
>gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens]
Length = 781
Score = 40.8 bits (94), Expect = 0.002
Identities = 60/217 (27%), Positives = 88/217 (40%), Gaps = 47/217 (21%)
Query: 164 QQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQA-------------QPQG 210
QQ T+S TT GQ+ + Q + + Q +Q+ A QP
Sbjct: 350 QQNTNSLTT-SSGQVHSSDLQGNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPTS 408
Query: 211 QAQQAQSGTGQTMQVMQQIITNTGE--IQQIPVQLNAG----QLQYIRLAQPVS-GTQVV 263
QAQ Q T QT+ +Q N + +Q + +QLN G Q Q + + V+ T V
Sbjct: 409 QAQIVQGITPQTIHGVQASGQNISQQALQNLQLQLNPGTFLIQAQTVTPSGQVTWQTFQV 468
Query: 264 QG-----QIQTLATNAQQITQTEVQQ---GQQQFS--------QFTDGQLYQIQQVTMPA 307
QG +Q T AQQIT T VQ GQ + GQL +Q VT+ +
Sbjct: 469 QGVQNLQNLQIQNTAAQQITLTPVQTLTLGQVAAGGAFTSTPVSLSTGQLPNLQTVTVNS 528
Query: 308 ----------GQDLAQPMFIQSANQPSDGQAPQVTGD 334
G++ P I+ + D + Q++GD
Sbjct: 529 IDSAGIQLHPGENADSPADIRIKEEEPDPEEWQLSGD 565
>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
Length = 707
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 211 QAQQAQSGTGQTM----QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQ 264
Q + S TG T+ V Q T +QQ+PVQ Q+Q ++ Q V QV V+
Sbjct: 2 QTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE 61
Query: 265 GQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQ 301
G T+ TN T T Q +SQ T G + Q
Sbjct: 62 GS-DTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQ 97
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 211 QAQQAQSGTGQTM----QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQ 264
Q + S TG T+ V Q T +QQ+PVQ Q+Q ++ Q V QV V+
Sbjct: 2 QTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE 61
Query: 265 GQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQ 301
G T+ TN T T Q +SQ T G + Q
Sbjct: 62 GS-DTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQ 97
>gi|4758010 clock [Homo sapiens]
Length = 846
Score = 38.9 bits (89), Expect = 0.007
Identities = 53/178 (29%), Positives = 70/178 (39%), Gaps = 34/178 (19%)
Query: 164 QQTTSSTTTIQPGQIIIAQPQQ----GQT----------TPVTMQVGEGQQVQIVQAQPQ 209
QQT ST+T ++ QQ QT T V Q G VQI + PQ
Sbjct: 625 QQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLTAPLYNTMVISQPAAGSMVQIPSSMPQ 684
Query: 210 GQAQQAQSGT-GQTMQVM----QQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQ 264
Q A T Q Q+ QQ++T ++ PV A + + + QVV
Sbjct: 685 NSTQSAAVTTFTQDRQIRFSQGQQLVT---KLVTAPVACGA-----VMVPSTMLMGQVVT 736
Query: 265 GQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQP--MFIQSA 320
T AT QQ V Q QQQ S Q Q+ V P+ L QP F+Q++
Sbjct: 737 A-YPTFATQQQQSQTLSVTQQQQQQS----SQEQQLTSVQQPSQAQLTQPPQQFLQTS 789
Score = 35.0 bits (79), Expect = 0.094
Identities = 50/176 (28%), Positives = 64/176 (36%), Gaps = 36/176 (20%)
Query: 144 YYFTLAQQPTA---VQVQGQ--QQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEG 198
Y + QP A VQ+ Q Q+ + TT Q QI +Q QQ T VT V G
Sbjct: 662 YNTMVISQPAAGSMVQIPSSMPQNSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPVACG 721
Query: 199 QQV--------QIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQY 250
+ Q+V A P QQ QS QT+ V QQ + + QQ+ Q Q
Sbjct: 722 AVMVPSTMLMGQVVTAYPTFATQQQQS---QTLSVTQQQQQQSSQEQQLTSVQQPSQAQ- 777
Query: 251 IRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMP 306
L QP QQ QT +Q + +QQ T P
Sbjct: 778 --LTQP-----------------PQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFP 814
Score = 29.3 bits (64), Expect = 5.2
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 151 QPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ-PQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
Q +V Q QQQ Q T+ QP Q + Q PQQ T + Q+ + A P
Sbjct: 749 QTLSVTQQQQQQSSQEQQLTSVQQPSQAQLTQPPQQFLQTSRLLHGNPSTQLILSAAFPL 808
Query: 210 GQAQQAQSGTGQTMQVMQQ 228
Q+ QS Q QQ
Sbjct: 809 QQSTFPQSHHQQHQSQQQQ 827
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 38.1 bits (87), Expect = 0.011
Identities = 42/144 (29%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQ-----QGQQTTSSTTTIQPGQ 177
+ P + Q+ ++Q V + +Q L QQ AV +Q QQ + QQ +Q Q
Sbjct: 99 ITPQQMQQILQQQVLSPQQLQ---ALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 155
Query: 178 IIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQ 237
Q QQ Q Q + QQ Q Q Q Q Q QQ G Q QQ Q
Sbjct: 156 Q--QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQ 213
Query: 238 QIPVQLNAGQLQYIRLAQPVSGTQ 261
Q+ Q Q+Q ++ Q + Q
Sbjct: 214 QLVFQQQLLQMQQLQQQQHLLSLQ 237
Score = 35.8 bits (81), Expect = 0.055
Identities = 44/181 (24%), Positives = 66/181 (36%), Gaps = 7/181 (3%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQA 206
TL+ Q A G+ G T+S +T++ + QQ Q Q+ QQ +++
Sbjct: 22 TLSSQLDAGSRDGRSSGD-TSSEVSTVE-----LLHLQQQQALQAARQLLLQQQTSGLKS 75
Query: 207 QPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQ 266
Q+ + Q+IT ++QQI Q Q L Q + Q Q
Sbjct: 76 PKSSDKQRPLQVPVSVAMMTPQVITPQ-QMQQILQQQVLSPQQLQALLQQQQAVMLQQQQ 134
Query: 267 IQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQDLAQPMFIQSANQPSDG 326
+Q Q+ ++ Q QQQ Q Q Q QQ Q Q Q Q G
Sbjct: 135 LQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPG 194
Query: 327 Q 327
+
Sbjct: 195 K 195
Score = 28.9 bits (63), Expect = 6.7
Identities = 47/175 (26%), Positives = 61/175 (34%), Gaps = 23/175 (13%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQ--------- 200
Q+P V V Q + Q Q + PQQ Q Q QQ
Sbjct: 82 QRPLQVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKK 141
Query: 201 ------VQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLA 254
+Q++Q Q Q Q QQ Q Q Q QQ QQ Q Q Q
Sbjct: 142 QQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQ-------QQQQQQQQQQQQQQQQHPG 194
Query: 255 QPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQQVTMPAGQ 309
+ Q Q Q Q LA Q + Q ++ Q QQ Q L + +++P GQ
Sbjct: 195 KQAKEQQQQQQQQQQLAAQ-QLVFQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQ 248
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,415,228
Number of Sequences: 37866
Number of extensions: 485260
Number of successful extensions: 2417
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 1852
Number of HSP's gapped (non-prelim): 387
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.