Guide to the Human Genome
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Name: SP3 Sequence: fasta or formatted (781aa) NCBI GI: 38373693
Description:

Sp3 transcription factor isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [713aa] Sp3 transcription factor isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         62           6
 C cysteine            1.3         10           1
 D aspartate           4.2         33           2
 E glutamate           4.4         34           3
 F phenylalanine       1.5         12           1
 G glycine            10.1         79           9
 H histidine           2.6         20           1
 I isoleucine          5.6         44           2
 K lysine              2.6         20           3
 L leucine             7.6         59           2
 M methionine          0.9          7           1
 N asparagine          5.5         43           1
 P proline             5.4         42           2
 Q glutamine          11.5         90           5
 R arginine            2.6         20           2
 S serine              9.5         74           4
 T threonine           9.0         70           2
 V valine              6.5         51           2
 W tryptophan          0.6          5           1
 Y tyrosine            0.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Sp3 transcription factor isoform 1 
SP3                   0.910   Sp3 transcription factor isoform 2 
SP1                   0.297   Sp1 transcription factor isoform a 
SP1                   0.297   Sp1 transcription factor isoform b 
SP4                   0.295   Sp4 transcription factor 
SP2                   0.158   Sp2 transcription factor 
SP5                   0.120   Sp5 transcription factor 
SP9                   0.113   Sp9 transcription factor homolog 
SP8                   0.111   Sp8 transcription factor isoform 1 
SP8                   0.111   Sp8 transcription factor isoform 2 
SP6                   0.100   Sp6 transcription factor 
SP7                   0.100   osterix 
KLF13                 0.077   Kruppel-like factor 13 
KLF11                 0.075   Kruppel-like factor 11 
KLF10                 0.074   Kruppel-like factor 10 isoform b 
KLF10                 0.074   Kruppel-like factor 10 isoform a 
KLF9                  0.071   Kruppel-like factor 9 
KLF16                 0.070   BTE-binding protein 4 
KLF15                 0.069   Kruppel-like factor 15 
KLF14                 0.068   Kruppel-like factor 14 
KLF5                  0.064   Kruppel-like factor 5 
KLF1                  0.061   Kruppel-like factor 1 (erythroid) 
KLF6                  0.060   Kruppel-like factor 6 isoform A 
KLF4                  0.059   Kruppel-like factor 4 (gut) 
KLF2                  0.059   Kruppel-like factor 
KLF7                  0.058   Kruppel-like factor 7 (ubiquitous) 
KLF8                  0.057   Kruppel-like factor 8 isoform 1 
KLF3                  0.057   Kruppel-like factor 3 (basic) 
KLF12                 0.055   Kruppel-like factor 12 
KLF17                 0.054   zinc finger protein 393 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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