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Search of human proteins with 21717816
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21717816 solute carrier family 15, member 4 [Homo sapiens]
(577 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21717816 solute carrier family 15, member 4 [Homo sapiens] 1147 0.0
gi|7706117 solute carrier family 15, member 3 [Homo sapiens] 536 e-152
gi|226371746 peptide transporter 2 isoform a [Homo sapiens] 115 1e-25
gi|4827008 solute carrier family 15 (oligopeptide transporter), ... 105 1e-22
gi|226371748 peptide transporter 2 isoform b [Homo sapiens] 98 2e-20
gi|6912666 sialin [Homo sapiens] 34 0.32
gi|23510368 homeobox D11 [Homo sapiens] 33 0.93
gi|110624765 POU domain, class 3, transcription factor 1 [Homo s... 33 0.93
gi|57634530 olfactory receptor, family 5, subfamily B, member 21... 33 0.93
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 32 1.2
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 32 1.2
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 32 1.2
gi|40786402 transmembrane protein 179B [Homo sapiens] 32 1.6
gi|22035629 leukotriene C4 synthase [Homo sapiens] 31 2.7
gi|12707580 paired-like homeobox 2b [Homo sapiens] 31 2.7
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 31 2.7
gi|239743686 PREDICTED: hypothetical protein XP_002342934 [Homo ... 31 3.5
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 30 4.6
gi|9789947 fibroblast growth factor 20 [Homo sapiens] 30 6.1
gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens] 30 6.1
gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens] 30 6.1
gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens] 30 6.1
gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ... 30 7.9
gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ... 30 7.9
gi|239508758 PREDICTED: hypothetical protein [Homo sapiens] 30 7.9
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 30 7.9
gi|63053512 keratin associated protein 10-1 [Homo sapiens] 30 7.9
>gi|21717816 solute carrier family 15, member 4 [Homo sapiens]
Length = 577
Score = 1147 bits (2966), Expect = 0.0
Identities = 577/577 (100%), Positives = 577/577 (100%)
Query: 1 MEGSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSNLVL 60
MEGSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSNLVL
Sbjct: 1 MEGSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSNLVL 60
Query: 61 FLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAF 120
FLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAF
Sbjct: 61 FLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAF 120
Query: 121 PLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFAGLVLVGLGVATVKANITPFGA 180
PLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFAGLVLVGLGVATVKANITPFGA
Sbjct: 121 PLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFAGLVLVGLGVATVKANITPFGA 180
Query: 181 DQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVF 240
DQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVF
Sbjct: 181 DQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVF 240
Query: 241 LCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCK 300
LCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCK
Sbjct: 241 LCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCK 300
Query: 301 MSHGGPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTT 360
MSHGGPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTT
Sbjct: 301 MSHGGPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTT 360
Query: 361 PHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAG 420
PHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAG
Sbjct: 361 PHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAG 420
Query: 421 ILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAA 480
ILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAA
Sbjct: 421 ILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAA 480
Query: 481 PKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNINGCYLNYYFFLLA 540
PKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNINGCYLNYYFFLLA
Sbjct: 481 PKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNINGCYLNYYFFLLA 540
Query: 541 AIQGATLLLFLIISVKYDHHRDHQRSRANGVPTSRRA 577
AIQGATLLLFLIISVKYDHHRDHQRSRANGVPTSRRA
Sbjct: 541 AIQGATLLLFLIISVKYDHHRDHQRSRANGVPTSRRA 577
>gi|7706117 solute carrier family 15, member 3 [Homo sapiens]
Length = 581
Score = 536 bits (1380), Expect = e-152
Identities = 289/570 (50%), Positives = 380/570 (66%), Gaps = 39/570 (6%)
Query: 9 GERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSNLVLFLNGAPFC 68
GER PLL A G RRAA AVLL E+LERAAF+G+T+NLVL+LN F
Sbjct: 14 GERQPLL-------PRGARGPRRWRRAAGAAVLLVEMLERAAFFGVTANLVLYLNSTNFN 66
Query: 69 WEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPAT 128
W G QA+ A L+F+G +YL +P GGWLAD LGR RA+ LSL LYL P A P
Sbjct: 67 WTGEQATRAALVFLGASYLLAPVGGWLADVYLGRYRAVALSLLLYLAASGLLPATAFPDG 126
Query: 129 RAALCGS--ARLLNCTAPGP----DAAARCCSPATFAGLVLVGLGVATVKANITPFGADQ 182
R++ CG A L P + + C+P +AGL+L+GL ++V++N+T FGADQ
Sbjct: 127 RSSFCGEMPASPLGPACPSAGCPRSSPSPYCAPVLYAGLLLLGLAASSVRSNLTSFGADQ 186
Query: 183 VKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLC 242
V D G +ATRRFFNWFYWSINLGA+LSL +A+IQQN+SF+ GY+IP CVGLAF +FL
Sbjct: 187 VMDLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQNISFLLGYSIPVGCVGLAFFIFLF 246
Query: 243 GQSVFITKPPDGSAFTDMFKILTYSCCSQ--KRSGERQSNGEGIGVFQQSSKQSLFDSCK 300
VFITKPP GS + M K+ +CC Q +R R + ++S +
Sbjct: 247 ATPVFITKPPMGSQVSSMLKLALQNCCPQLWQRHSARDRQCARVLADERSPQP------- 299
Query: 301 MSHGGPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEI-----S 355
G +E + + + LVKI+PV + L+PYW VYFQMQ+TYVLQ LHL IP I +
Sbjct: 300 ----GASPQEDIANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFPANPA 355
Query: 356 NITT------TPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGM 409
NI+ + +T+P AWL + + V++L+L+PLKD+L+DP+L R LLPS+L+++A+GM
Sbjct: 356 NISVALRAQGSSYTIPEAWLLLANVVVVLILVPLKDRLIDPLLLRCKLLPSALQKMALGM 415
Query: 410 FFVMCSAFAAGILESKRLNLV-KEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFA 468
FF S AG+LE +RL+ + +T++Q IG V+Y+AA LS+WWQ+PQYLLIGISEIFA
Sbjct: 416 FFGFTSVIVAGVLEMERLHYIHHNETVSQQIGEVLYNAAPLSIWWQIPQYLLIGISEIFA 475
Query: 469 SIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNIN 528
SI GLEFAYS AP+SMQ AIMG+FF SGVGS +GS L+AL+S+ GW+ DFGNIN
Sbjct: 476 SIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVALLSLPG-GWLHCPKDFGNIN 534
Query: 529 GCYLNYYFFLLAAIQGATLLLFLIISVKYD 558
C ++ YFFLLA IQ T LLF+ I+ +Y+
Sbjct: 535 NCRMDLYFFLLAGIQAVTALLFVWIAGRYE 564
>gi|226371746 peptide transporter 2 isoform a [Homo sapiens]
Length = 729
Score = 115 bits (288), Expect = 1e-25
Identities = 95/407 (23%), Positives = 179/407 (43%), Gaps = 71/407 (17%)
Query: 40 VLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADAR 99
+++ E ER ++YG+ + L+L+ W ++ F L Y G +AD+
Sbjct: 49 IVVNEFCERFSYYGMKAVLILYFLYF-LHWNEDTSTSIYHAFSSLCYFTPILGAAIADSW 107
Query: 100 LGRARAILLSLALYLLGML-----AFPLLAAPATRAALCGSARLLNCTAPGPDAAARCCS 154
LG+ + I+ +Y+LG + A P+L L
Sbjct: 108 LGKFKTIIYLSLVYVLGHVIKSLGALPILGGQVVHTVL---------------------- 145
Query: 155 PATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIA 214
+ GL L+ LG +K + FG DQ +++ E R+F+ FY SIN G+++S
Sbjct: 146 --SLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITP 203
Query: 215 YIQQNVS------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSC 268
++ +V + + +P + + +A VVF G ++ PP+G+ +FK + ++
Sbjct: 204 MLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAI 263
Query: 269 CS--QKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEEK-----VEDVKALVKI 321
+ + RSG D K H + EK + DVKAL ++
Sbjct: 264 SNRFKNRSG---------------------DIPKRQHWLDWAAEKYPKQLIMDVKALTRV 302
Query: 322 VPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLI 381
+ +++ L +W + Q + + LQ++ + N L + + + +L+L+ I
Sbjct: 303 LFLYIPLPMFWALLDQQGSRWTLQAIRM------NRNLGFFVLQPDQMQVLNPLLVLIFI 356
Query: 382 PLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLN 428
PL D ++ ++ + G+ SSL+++AVGM + C AFA ++N
Sbjct: 357 PLFDFVIYRLVSKCGINFSSLRKMAVGM-ILACLAFAVAAAVEIKIN 402
Score = 53.5 bits (127), Expect = 5e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 446 AADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 502
A +S+ WQ+PQY L+ E+ S+ GLEF+YS AP SM+S + + VG+ +
Sbjct: 603 ANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNII 659
>gi|4827008 solute carrier family 15 (oligopeptide transporter),
member 1 [Homo sapiens]
Length = 708
Score = 105 bits (261), Expect = 1e-22
Identities = 82/403 (20%), Positives = 180/403 (44%), Gaps = 39/403 (9%)
Query: 29 AFAGRRAACGAVLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLG 88
+F G + +++ E ER ++YG+ + L+L+ W+ ++ F+ L YL
Sbjct: 8 SFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNF-ISWDDNLSTAIYHTFVALCYLT 66
Query: 89 SPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPGPDA 148
G +AD+ LG+ + I+ +Y +G ++ L + G
Sbjct: 67 PILGALIADSWLGKFKTIVSLSIVYTIGQAV----------TSVSSINDLTDHNHDGTPD 116
Query: 149 AARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAIL 208
+ + GL L+ LG +K ++ FG DQ ++ + RFF+ FY +IN G++L
Sbjct: 117 SLPVHVVLSLIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIFYLAINAGSLL 176
Query: 209 S--LGGIAYIQQ------NVSFVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDM 260
S + + +QQ + + +P + +A +VF+ G ++ P G+ +
Sbjct: 177 STIITPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKV 236
Query: 261 FKILTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEEKVEDVKALVK 320
K + ++ ++ R + ++ D K + E + +K + +
Sbjct: 237 AKCIGFAIKNRFRHRSKAF----------PKREHWLDWAKEK----YDERLISQIKMVTR 282
Query: 321 IVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLL 380
++ +++ L +W ++ Q + + LQ+ + +I + P + +A+LI+++
Sbjct: 283 VMFLYIPLPMFWALFDQQGSRWTLQATTMS-GKIGALEIQPDQMQTV-----NAILIVIM 336
Query: 381 IPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILE 423
+P+ D ++ P++ + G +SLK++AVGM + A I++
Sbjct: 337 VPIFDAVLYPLIAKCGFNFTSLKKMAVGMVLASMAFVVAAIVQ 379
Score = 45.1 bits (105), Expect = 2e-04
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 454 QVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 502
Q+PQY L+ E+ S+ GLEF+YS AP +M+S + + VG+ +
Sbjct: 584 QIPQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNII 632
>gi|226371748 peptide transporter 2 isoform b [Homo sapiens]
Length = 698
Score = 98.2 bits (243), Expect = 2e-20
Identities = 88/402 (21%), Positives = 167/402 (41%), Gaps = 92/402 (22%)
Query: 40 VLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADAR 99
+++ E ER ++YG+ + L+L+ W ++ F L Y G +AD+
Sbjct: 49 IVVNEFCERFSYYGMKAVLILYFLYF-LHWNEDTSTSIYHAFSSLCYFTPILGAAIADSW 107
Query: 100 LGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFA 159
LG+ + + L
Sbjct: 108 LGKFKVLSL--------------------------------------------------I 117
Query: 160 GLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIAYIQQN 219
GL L+ LG +K + FG DQ +++ E R+F+ FY SIN G+++S ++ +
Sbjct: 118 GLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGD 177
Query: 220 VS------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCS--Q 271
V + + +P + + +A VVF G ++ PP+G+ +FK + ++ + +
Sbjct: 178 VQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFK 237
Query: 272 KRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEEK-----VEDVKALVKIVPVFL 326
RSG D K H + EK + DVKAL +++ +++
Sbjct: 238 NRSG---------------------DIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYI 276
Query: 327 ALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDK 386
L +W + Q + + LQ++ + N L + + + +L+L+ IPL D
Sbjct: 277 PLPMFWALLDQQGSRWTLQAIRM------NRNLGFFVLQPDQMQVLNPLLVLIFIPLFDF 330
Query: 387 LVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLN 428
++ ++ + G+ SSL+++AVGM + C AFA ++N
Sbjct: 331 VIYRLVSKCGINFSSLRKMAVGM-ILACLAFAVAAAVEIKIN 371
Score = 53.5 bits (127), Expect = 5e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 446 AADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 502
A +S+ WQ+PQY L+ E+ S+ GLEF+YS AP SM+S + + VG+ +
Sbjct: 572 ANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNII 628
>gi|6912666 sialin [Homo sapiens]
Length = 495
Score = 34.3 bits (77), Expect = 0.32
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 25/197 (12%)
Query: 318 LVKIVPVFLALIPY----WTVY--FQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTM 371
++K +P++ ++ + WT Y + TY+ + L + E +++ P+ +WL M
Sbjct: 285 ILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYL--GSWLCM 342
Query: 372 FDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRI--AVGMFFVMCSAFAAGILESKRLNL 429
L + D + + ++RI +GM AAG +
Sbjct: 343 I----------LSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLA 392
Query: 430 VKEKTINQTIGNVVYHAADLSLWWQVPQY--LLIGISEIFASIAGL---EFAYSAAPKSM 484
V TI+ T+G ++ P Y +L+GI+ FA+I G+ A S P +
Sbjct: 393 VAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDNT 452
Query: 485 QSAIMGLFFFFSGVGSF 501
+F+ + + F
Sbjct: 453 VGEWQTVFYIAAAINVF 469
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 32.7 bits (73), Expect = 0.93
Identities = 17/25 (68%), Positives = 17/25 (68%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAA 27
G GGGAG AP A AAAAAAAA
Sbjct: 95 GGGGGAGGYAPYYAAAAAAAAAAAA 119
>gi|110624765 POU domain, class 3, transcription factor 1 [Homo
sapiens]
Length = 451
Score = 32.7 bits (73), Expect = 0.93
Identities = 17/27 (62%), Positives = 18/27 (66%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGA 29
G GGGAG PL+ AAAAAAAA A
Sbjct: 11 GPGGGAGGTGPLMHPDAAAAAAAAAAA 37
>gi|57634530 olfactory receptor, family 5, subfamily B, member 21
[Homo sapiens]
Length = 309
Score = 32.7 bits (73), Expect = 0.93
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 491 LFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNINGCYLNYYFFLLAAIQGATLLLF 550
++FF S + S V G + V+ K + + S + +GC ++FF + AT+ +
Sbjct: 57 MYFFLSNL-SLVDLGYSSAVAPKTVAALRSGDKAISYDGCAAQFFFF----VGFATVECY 111
Query: 551 LIISVKYDHH 560
L+ S+ YD H
Sbjct: 112 LLASMAYDRH 121
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 32.3 bits (72), Expect = 1.2
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSN 57
G GGGAG GA AAAAAAAA A G G +A YG+ S+
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG--------SSAGYGVLSS 312
Score = 32.0 bits (71), Expect = 1.6
Identities = 18/30 (60%), Positives = 18/30 (60%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAG 32
G GGG G A GA AAAAAAA A AG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 32.3 bits (72), Expect = 1.2
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSN 57
G GGGAG GA AAAAAAAA A G G +A YG+ S+
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG--------SSAGYGVLSS 312
Score = 32.0 bits (71), Expect = 1.6
Identities = 18/30 (60%), Positives = 18/30 (60%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAG 32
G GGG G A GA AAAAAAA A AG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 32.3 bits (72), Expect = 1.2
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSN 57
G GGGAG GA AAAAAAAA A G G +A YG+ S+
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG--------SSAGYGVLSS 312
Score = 32.0 bits (71), Expect = 1.6
Identities = 18/30 (60%), Positives = 18/30 (60%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAG 32
G GGG G A GA AAAAAAA A AG
Sbjct: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
>gi|40786402 transmembrane protein 179B [Homo sapiens]
Length = 219
Score = 32.0 bits (71), Expect = 1.6
Identities = 40/134 (29%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 14 LLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSNLVLFLNGAP-FCWEGA 72
L GA AAA G+F+GR G L S+L L AP C+ A
Sbjct: 19 LCGAVAAAAMTRTQGSFSGRCPLYGVATLN-----------GSSLALSRPSAPSLCYFVA 67
Query: 73 QASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPAT---- 128
AS L L+ L L + + D+ G AI L +AL + + F +L +
Sbjct: 68 GASGLLALYCLLLLLFWIYSSCIEDSHRG---AIGLRIALAISAIAVFLVLVSACILRFG 124
Query: 129 RAALCGSARLLNCT 142
+LC S LN T
Sbjct: 125 TRSLCNSIISLNTT 138
>gi|22035629 leukotriene C4 synthase [Homo sapiens]
Length = 150
Score = 31.2 bits (69), Expect = 2.7
Identities = 34/80 (42%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 67 FCWEGAQASEALL-LFMGLTYLGSPFGGWLADARL------GRARAILLSLALYLLGMLA 119
F EGA A L+ LF L Y F G+ A+L ARA+ L +AL LG+LA
Sbjct: 73 FFHEGAAALCGLVYLFARLRY----FQGYARSAQLRLAPLYASARALWLLVALAALGLLA 128
Query: 120 FPLLAAPATRAALCGSARLL 139
L A A RAAL G R L
Sbjct: 129 HFLPA--ALRAALLGRLRTL 146
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGAV 40
G GG GE P G AAAAAAAA A A AA G +
Sbjct: 228 GPGGPGGE--PGKGGAAAAAAAAAAAAAAAAAAAAGGL 263
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 31.2 bits (69), Expect = 2.7
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGA 39
G GGG+ A +AAAAAA A A AA GA
Sbjct: 150 GGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGA 186
Score = 30.0 bits (66), Expect = 6.1
Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 3 GSGGGAGE----RAPLLGARRAAAAAAAAGAFAGRRAACGA 39
G GGG G A A AAAAAAAA A A A GA
Sbjct: 148 GGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
>gi|239743686 PREDICTED: hypothetical protein XP_002342934 [Homo
sapiens]
Length = 68
Score = 30.8 bits (68), Expect = 3.5
Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 2 EGSGGG-----AGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERA 49
EG GGG AG RAPL + R AAA A GA A A G + L RA
Sbjct: 13 EGGGGGGLEGRAGRRAPLAASGR--AAAGAMGARARSLAGHGLLRRNTLTSRA 63
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 30.4 bits (67), Expect = 4.6
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 3 GSGGGAGERAPLLGARRAAAAAAAAGAFAGRRAACGAVLLTELLERAAFYGITSNLVLFL 62
G G GER +L AAAAAAAA A +GR A EL A +TS L ++
Sbjct: 16 GPGAYGGERPGVL----AAAAAAAAAASSGRPGA------AELGGGAGAAAVTSVLGMYA 65
Query: 63 NGAPFCWEGAQASEALLLFMGLTYLGSPFG 92
P+ GA A L + L S G
Sbjct: 66 AAGPYA--GAPNYSAFLPYAADLSLFSQMG 93
>gi|9789947 fibroblast growth factor 20 [Homo sapiens]
Length = 211
Score = 30.0 bits (66), Expect = 6.1
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 8 AGERAPLLGARRAAAAAAAAG 28
AGER PLLG RR+AA +A G
Sbjct: 30 AGERPPLLGERRSAAERSARG 50
>gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens]
Length = 165
Score = 30.0 bits (66), Expect = 6.1
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 138 LLNCTAPGPDAAARC--CSPATFAGL 161
LLN T P P A RC CSP ++AGL
Sbjct: 115 LLNSTWPLPSATQRCASCSPPSYAGL 140
>gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens]
Length = 158
Score = 30.0 bits (66), Expect = 6.1
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 138 LLNCTAPGPDAAARC--CSPATFAGL 161
LLN T P P A RC CSP ++AGL
Sbjct: 108 LLNSTWPLPSATQRCASCSPPSYAGL 133
>gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens]
Length = 131
Score = 30.0 bits (66), Expect = 6.1
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 138 LLNCTAPGPDAAARC--CSPATFAGL 161
LLN T P P A RC CSP ++AGL
Sbjct: 81 LLNSTWPLPSATQRCASCSPPSYAGL 106
>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
Length = 334
Score = 29.6 bits (65), Expect = 7.9
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 118 LAFPLL----AAPATRAALC--GSARLLNC-TAPGPDAAARCCSPATFAG 160
LA PLL + P+TRA G A LL P PD AARC A AG
Sbjct: 173 LATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAG 222
>gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo
sapiens]
Length = 329
Score = 29.6 bits (65), Expect = 7.9
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 118 LAFPLL----AAPATRAALC--GSARLLNC-TAPGPDAAARCCSPATFAG 160
LA PLL + P+TRA G A LL P PD AARC A AG
Sbjct: 168 LATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAG 217
>gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 29.6 bits (65), Expect = 7.9
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 118 LAFPLL----AAPATRAALC--GSARLLNC-TAPGPDAAARCCSPATFAG 160
LA PLL + P+TRA G A LL P PD AARC A AG
Sbjct: 168 LATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAG 217
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 29.6 bits (65), Expect = 7.9
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 309 EEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPE 353
EE + D+KA V +P +A IP V QM +L L R PE
Sbjct: 1858 EELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPE 1902
>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
Length = 282
Score = 29.6 bits (65), Expect = 7.9
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 122 LLAAPATRAALCGSARLLNCTAPGPDAAARCCSPATFAGLV 162
LL P R A C + +C AP A CC PA+ L+
Sbjct: 234 LLCRPVCRPACC--MPVSSCCAPASSCQASCCRPASCVSLL 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.139 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,647,962
Number of Sequences: 37866
Number of extensions: 898566
Number of successful extensions: 4511
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4368
Number of HSP's gapped (non-prelim): 97
length of query: 577
length of database: 18,247,518
effective HSP length: 108
effective length of query: 469
effective length of database: 14,157,990
effective search space: 6640097310
effective search space used: 6640097310
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.