C11orf17 13054

Name: C11orf17	Sequence: fasta or formatted (210aa)		NCBI GI: 21361870
Description: chromosome 11 open reading frame 17		Not currently referenced in the text
Other entries for this name: alt mRNA {210aa} chromosome 11 open reading frame 17
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 20 4 C cysteine 1.9 4 1 D aspartate 4.8 10 1 E glutamate 7.6 16 2 F phenylalanine 1.4 3 1 G glycine 8.1 17 2 H histidine 3.3 7 1 I isoleucine 1.9 4 1 K lysine 5.2 11 2 L leucine 8.1 17 1 M methionine 2.4 5 1 N asparagine 2.4 5 1 P proline 6.2 13 2 Q glutamine 3.8 8 1 R arginine 8.1 17 2 S serine 8.6 18 2 T threonine 4.3 9 1 V valine 7.6 16 2 W tryptophan 0.5 1 1 Y tyrosine 4.3 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromosome 11 open reading frame 17 C11orf17 1.000 chromosome 11 open reading frame 17 SH3PXD2B 0.020 SH3 and PX domains 2B ZNF213 0.020 zinc finger protein 213 ZNF213 0.020 zinc finger protein 213 RBM5 0.015 RNA binding motif protein 5 KIAA1529 0.012 hypothetical protein LOC57653 ZFP37 0.012 zinc finger protein 37 homolog BRD1 0.012 bromodomain containing protein 1 ZNF806 0.010 PREDICTED: zinc finger protein 806 MAP4K2 0.010 mitogen-activated protein kinase kinase kinase kinas... ZNF12 0.010 zinc finger protein 12 isoform b ZNF12 0.010 zinc finger protein 12 isoform a ARHGEF5L 0.007 Rho guanine nucleotide exchange factor (GEF) 5-like ... ARHGEF5 0.007 rho guanine nucleotide exchange factor 5 ARHGEF18 0.007 Rho/Rac guanine nucleotide exchange factor 18 isofo... ARHGEF18 0.007 Rho/Rac guanine nucleotide exchange factor 18 isofor... LOC100293129 0.007 PREDICTED: hypothetical protein ZNF546 0.007 zinc finger protein 546 ZNF500 0.007 zinc finger protein 500 C12orf52 0.007 hypothetical protein LOC84934 ALMS1 0.005 Alstrom syndrome 1 LOC652119 0.005 PREDICTED: similar to putative DUX4 protein LOC652119 0.005 PREDICTED: similar to putative DUX4 protein ZNF136 0.005 zinc finger protein 136 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.