Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 113428915
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113428915 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
(185 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214926 PREDICTED: similar to IQ motif and SEC7 domain-cont... 375 e-105
gi|113428915 PREDICTED: similar to IQ motif and SEC7 domain-cont... 375 e-105
gi|169217823 PREDICTED: similar to IQ motif and SEC7 domain-cont... 372 e-103
gi|113431383 PREDICTED: hypothetical protein [Homo sapiens] 372 e-103
gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo ... 365 e-102
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 58 5e-09
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 45 3e-05
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 45 3e-05
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 45 3e-05
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 45 4e-05
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 45 4e-05
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 45 4e-05
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 45 4e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 45 5e-05
gi|116805330 small conductance calcium-activated potassium chann... 44 6e-05
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 43 1e-04
gi|4557317 annexin A11 [Homo sapiens] 42 3e-04
gi|22165433 annexin A11 [Homo sapiens] 42 3e-04
gi|22165431 annexin A11 [Homo sapiens] 42 3e-04
gi|33356148 formin-like 1 [Homo sapiens] 42 4e-04
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 41 7e-04
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 41 7e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 41 7e-04
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 41 7e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 41 7e-04
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 41 7e-04
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 41 7e-04
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 41 7e-04
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 41 7e-04
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 40 9e-04
>gi|169214926 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
Length = 185
Score = 375 bits (964), Expect = e-105
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|113428915 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
Length = 185
Score = 375 bits (964), Expect = e-105
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|169217823 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
Length = 185
Score = 372 bits (954), Expect = e-103
Identities = 183/185 (98%), Positives = 183/185 (98%)
Query: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELS ENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSP KHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|113431383 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 372 bits (954), Expect = e-103
Identities = 183/185 (98%), Positives = 183/185 (98%)
Query: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELS ENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSP KHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo
sapiens]
Length = 185
Score = 365 bits (938), Expect = e-102
Identities = 181/185 (97%), Positives = 181/185 (97%)
Query: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
MESLLENPVRAVL LKELTAIVQ QQSLIHTQRERIDELERRLDELS ENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSP KHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 57.8 bits (138), Expect = 5e-09
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 6 ENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQL 59
E+P RAV L EL I++ QQ L+ TQR RI+ELE +LD+L+ ENR L E QL
Sbjct: 14 ESPNRAVEYLLELNNIIESQQQLLETQRRRIEELEGQLDQLTQENRDLREESQL 67
Score = 30.4 bits (67), Expect = 0.91
Identities = 33/123 (26%), Positives = 38/123 (30%), Gaps = 42/123 (34%)
Query: 58 QLLQAQPPPGLVPP--------SSAPLPAA-------PATAPAAAARAQEPLQDQGQRSA 102
QL PPP PP + P+P P AP A G+
Sbjct: 1302 QLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGRPGRAPRRGAGGHPQFAPHGRHPL 1361
Query: 103 AAP-------HPAPDRPPRQ----------HHGQLLEQPQR--GPGSRA--------HTP 135
P PAP PP HH Q++ GPGSR H P
Sbjct: 1362 HQPTSPLPLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSRPPGGSYSHPHHP 1421
Query: 136 QSP 138
QSP
Sbjct: 1422 QSP 1424
Score = 27.3 bits (59), Expect = 7.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 57 QQLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQR 100
++L +PPP P AP P P P + ++ +++G R
Sbjct: 530 ERLPSTEPPPQGRPEFWAPAPLPPVPPPVPSGTREDGSREEGTR 573
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/140 (32%), Positives = 52/140 (37%), Gaps = 26/140 (18%)
Query: 57 QQLLQAQP-----PPGLVP-PSSAP--LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPA 108
QQ+LQAQP P G+ P PSSAP P P P +A A P A A
Sbjct: 177 QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA 236
Query: 109 PDRPPRQHHGQLLE--QPQRGPGSRAHTPQSPQKH------LGTQGAVTDKEKERPP--- 157
P P H Q PQR P H P P H G+ G + +PP
Sbjct: 237 PTAPVPHTHIQQAPALHPQRPPS--PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 294
Query: 158 -----SCCAAAGALLQHKSP 172
AG LLQH P
Sbjct: 295 QGPPGPHSLQAGPLLQHPGP 314
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQH----- 116
A PPP + P S PLP++PA P P AP P QH
Sbjct: 429 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 488
Query: 117 --------HGQLLEQPQRGPGSRAHTPQS 137
P GPG+ A P S
Sbjct: 489 GPPPITPPTCPSTSTPPAGPGTSAQPPCS 517
Score = 32.7 bits (73), Expect = 0.18
Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 58 QLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSA--AAPHPAPDRPPRQ 115
Q Q Q P G P ++ P + A +A ++Q+P ++Q A A PH P PP
Sbjct: 323 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PPTT 380
Query: 116 HHGQLLEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSA 174
QL P + H P HL + PP +L H PSA
Sbjct: 381 PIPQL-----PAPQAHKHPP-----HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSA 429
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/140 (32%), Positives = 52/140 (37%), Gaps = 26/140 (18%)
Query: 57 QQLLQAQP-----PPGLVP-PSSAP--LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPA 108
QQ+LQAQP P G+ P PSSAP P P P +A A P A A
Sbjct: 731 QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA 790
Query: 109 PDRPPRQHHGQLLE--QPQRGPGSRAHTPQSPQKH------LGTQGAVTDKEKERPP--- 157
P P H Q PQR P H P P H G+ G + +PP
Sbjct: 791 PTAPVPHTHIQQAPALHPQRPPS--PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 848
Query: 158 -----SCCAAAGALLQHKSP 172
AG LLQH P
Sbjct: 849 QGPPGPHSLQAGPLLQHPGP 868
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQH----- 116
A PPP + P S PLP++PA P P AP P QH
Sbjct: 983 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
Query: 117 --------HGQLLEQPQRGPGSRAHTPQS 137
P GPG+ A P S
Sbjct: 1043 GPPPITPPTCPSTSTPPAGPGTSAQPPCS 1071
Score = 32.7 bits (73), Expect = 0.18
Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 58 QLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSA--AAPHPAPDRPPRQ 115
Q Q Q P G P ++ P + A +A ++Q+P ++Q A A PH P PP
Sbjct: 877 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PPTT 934
Query: 116 HHGQLLEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSA 174
QL P + H P HL + PP +L H PSA
Sbjct: 935 PIPQL-----PAPQAHKHPP-----HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSA 983
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/140 (32%), Positives = 52/140 (37%), Gaps = 26/140 (18%)
Query: 57 QQLLQAQP-----PPGLVP-PSSAP--LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPA 108
QQ+LQAQP P G+ P PSSAP P P P +A A P A A
Sbjct: 731 QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA 790
Query: 109 PDRPPRQHHGQLLE--QPQRGPGSRAHTPQSPQKH------LGTQGAVTDKEKERPP--- 157
P P H Q PQR P H P P H G+ G + +PP
Sbjct: 791 PTAPVPHTHIQQAPALHPQRPPS--PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG 848
Query: 158 -----SCCAAAGALLQHKSP 172
AG LLQH P
Sbjct: 849 QGPPGPHSLQAGPLLQHPGP 868
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQH----- 116
A PPP + P S PLP++PA P P AP P QH
Sbjct: 983 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
Query: 117 --------HGQLLEQPQRGPGSRAHTPQS 137
P GPG+ A P S
Sbjct: 1043 GPPPITPPTCPSTSTPPAGPGTSAQPPCS 1071
Score = 32.7 bits (73), Expect = 0.18
Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 58 QLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSA--AAPHPAPDRPPRQ 115
Q Q Q P G P ++ P + A +A ++Q+P ++Q A A PH P PP
Sbjct: 877 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PPTT 934
Query: 116 HHGQLLEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSA 174
QL P + H P HL + PP +L H PSA
Sbjct: 935 PIPQL-----PAPQAHKHPP-----HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSA 983
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 45.1 bits (105), Expect = 4e-05
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 68 LVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRG 127
++ P+ AP PA PA APA A A P A AP PAPD P++ Q Q QRG
Sbjct: 166 VLAPAPAPAPA-PAPAPAPVA-APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRG 223
Query: 128 PGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGA 165
P + Q H G G RP + AAA A
Sbjct: 224 -----QEPLADQLHSGISG--------RPAAGTAAASA 248
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 45.1 bits (105), Expect = 4e-05
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 68 LVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRG 127
++ P+ AP PA PA APA A A P A AP PAPD P++ Q Q QRG
Sbjct: 166 VLAPAPAPAPA-PAPAPAPVA-APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRG 223
Query: 128 PGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGA 165
P + Q H G G RP + AAA A
Sbjct: 224 -----QEPLADQLHSGISG--------RPAAGTAAASA 248
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 45.1 bits (105), Expect = 4e-05
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 68 LVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRG 127
++ P+ AP PA PA APA A A P A AP PAPD P++ Q Q QRG
Sbjct: 177 VLAPAPAPAPA-PAPAPAPVA-APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRG 234
Query: 128 PGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGA 165
P + Q H G G RP + AAA A
Sbjct: 235 -----QEPLADQLHSGISG--------RPAAGTAAASA 259
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 45.1 bits (105), Expect = 4e-05
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 10/120 (8%)
Query: 41 RRLDELSTENRSLWEHQQLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQR 100
R D + T S+ Q+ P G P+ LP PA P A Q P Q G
Sbjct: 352 RLTDPIPTTETSIAPRQR-----PKAGQTQPNPGILPIQPALTPRKRATVQPPPQAAGSS 406
Query: 101 S-----AAAPHPAPDRPPRQHHGQLLEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKER 155
+ A+ P P P PP Q Q + + P + TP + + L Q T + +++
Sbjct: 407 NQPGLLASVPQPKPQAPPSQPLPQTQAKQPQAPPTPQQTPSTQAQGLPAQAQATPQHQQQ 466
Score = 32.0 bits (71), Expect = 0.31
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 59 LLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHG 118
LL + P P P S PLP A P A Q+ Q Q A P QH
Sbjct: 411 LLASVPQPKPQAPPSQPLPQTQAKQPQAPPTPQQTPSTQAQGLPAQAQATP-----QHQQ 465
Query: 119 QLLEQPQRGPGSRAHTPQSPQKHLGT 144
QL + Q+ + P + Q+ GT
Sbjct: 466 QLFLKQQQ---QQQQPPPAQQQPAGT 488
Score = 28.5 bits (62), Expect = 3.4
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 16/113 (14%)
Query: 25 QQSLIHT--QRERIDELERRLDELST--ENRSLWEHQQLLQAQPPPGLVPPSSAPLPAAP 80
QQ L+ Q+++ + +++ +L+T + L Q LQ +P AAP
Sbjct: 524 QQQLMQNFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAP 583
Query: 81 ATAPAAAARAQEPLQD------------QGQRSAAAPHPAPDRPPRQHHGQLL 121
APA Q P++ QGQ+ + P+ + R H ++L
Sbjct: 584 QPAPAQEPAIQAPVRQQPKVQTTPPPAVQGQKVGSLTPPSSPKTQRAGHRRIL 636
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 44.7 bits (104), Expect = 5e-05
Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAP-----HPAPDRPPRQH 116
A PP + PPS P PAT P++ P +G AA PA PP
Sbjct: 1332 APTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAM-TPPSPK 1390
Query: 117 HGQLLEQPQRGPGSRAHTPQSPQKHLGT----QGAVTDKEKERPP 157
G + P+ P S A P SP+K T +GA T + + P
Sbjct: 1391 RGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTP 1435
Score = 40.0 bits (92), Expect = 0.001
Identities = 33/102 (32%), Positives = 39/102 (38%), Gaps = 15/102 (14%)
Query: 62 AQPP-----PGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQH 116
A PP P PP AP P A AT P+ P AP+PA PP
Sbjct: 1246 ATPPSPKGGPATPPPKGAPTPPA-ATPPSLKGGLATPPHK------GAPNPAVVTPPSPK 1298
Query: 117 HGQLLEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPS 158
G P+ P A TP SP+ G+ G K PP+
Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPK---GSPGTPPPKGAPTPPA 1337
Score = 38.9 bits (89), Expect = 0.003
Identities = 36/109 (33%), Positives = 42/109 (38%), Gaps = 17/109 (15%)
Query: 62 AQPPPGLVPPS------SAPLPAAPATAPAAAARAQEPLQDQGQRSAA---APHPAPDRP 112
A PP PPS + PLP T PAA P G + + AP P P
Sbjct: 1032 ASTPPAATPPSPKGSPAATPLPKGAPTTPAATL----PSPKGGPATPSLKGAPTPPAATP 1087
Query: 113 PRQHHGQLLEQPQRGPGSRAHTPQSPQKHLGT---QGAVTDKEKERPPS 158
P G P+ P A TP SP+ L T +GA T PPS
Sbjct: 1088 PSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPT-TPAATPPS 1135
Score = 38.5 bits (88), Expect = 0.003
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPD----RPPRQHH 117
A PP PPS PA P+ A A P +G + +P AP PP
Sbjct: 939 APTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKG 998
Query: 118 GQLLEQPQRGPGSRAHTPQSPQ 139
G P+ P A TP SP+
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPK 1020
Score = 37.4 bits (85), Expect = 0.007
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 62 AQPPPGLVPPSSAPLPAAP----ATAP---AAAARAQEPLQDQGQRSAAAPHPAPDRP-- 112
A PPP P + A P +P AT P A A P +G + +P AP P
Sbjct: 1141 ATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1200
Query: 113 --PRQHHGQLLEQPQRGPGSRAHTPQSPQKHLGT---QGAVTDKEKERPPS 158
P G P+ P + A TP SP+ L T +GA T PPS
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT-TPAATPPS 1250
Score = 37.0 bits (84), Expect = 0.010
Identities = 35/104 (33%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRP---PRQHHG 118
A PP PPS A P A A P +G + P AP P P G
Sbjct: 1102 APMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1161
Query: 119 QLLEQPQRG-PGSRAHTPQSPQKHLGT---QGAVTDKEKERPPS 158
L P +G P + A TP SP+ L T +GA T PPS
Sbjct: 1162 GLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPT-TPAATPPS 1204
Score = 34.3 bits (77), Expect = 0.063
Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRP----PRQHH 117
A P PPS A P A A P +G + P AP P P
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1184
Query: 118 GQLLEQPQRGPGSRAHTPQSPQKHLGT---QGAVTDKEKERPPS 158
G P+ P + A TP SP+ L T +GA T PPS
Sbjct: 1185 GLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT-TPAATPPS 1227
Score = 33.9 bits (76), Expect = 0.082
Identities = 36/132 (27%), Positives = 49/132 (37%), Gaps = 11/132 (8%)
Query: 62 AQPPPGLVP--PSSAPLPAAPATAPAAAARAQEPLQ------DQGQRSAAAPHPAPDRPP 113
A P P P PSS + PA P+ A P + AP P PP
Sbjct: 1563 AIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPP 1622
Query: 114 RQHHGQLLEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPS 173
G P+ P S TP S + + +VT K P A+ L K P+
Sbjct: 1623 SPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQ---ASKGLPAKKGPT 1679
Query: 174 ALGKGVLSRRPE 185
AL + +++ PE
Sbjct: 1680 ALKEVLVAPAPE 1691
Score = 31.6 bits (70), Expect = 0.41
Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 14/137 (10%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSA------AAPHPAPDRPPRQ 115
A PP PPS PA P+ A A P +G +A A+ PA P +
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044
Query: 116 HHGQLLEQPQRGPGSRAHTPQSPQ--------KHLGTQGAVTDKEKERPPSCCAAAGALL 167
P+ P + A T SP+ K T A T + P+ + GA +
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM 1104
Query: 168 QHKSPSALGKGVLSRRP 184
+ KG L+ P
Sbjct: 1105 PPAATPPSPKGGLATPP 1121
Score = 31.2 bits (69), Expect = 0.53
Identities = 23/74 (31%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLL 121
A PP PPS PA P+ A A P +G + +P AP P
Sbjct: 962 APTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPP--------A 1013
Query: 122 EQPQRGPGSRAHTP 135
P GS A TP
Sbjct: 1014 VTPPSPKGSPAATP 1027
Score = 28.9 bits (63), Expect = 2.6
Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 21/112 (18%)
Query: 64 PPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQ 123
P G PSS P PA P + +EP + ++++P AP P
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPS---PKEPPAPKQVATSSSPKKAPATP----------A 1498
Query: 124 PQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSAL 175
P P A P SP++ T + D A LL K+P+ L
Sbjct: 1499 PMGAPTLPAVIPSSPKEVPATPSSRRDP--------IAPTATLLSKKTPATL 1542
>gi|116805330 small conductance calcium-activated potassium channel
protein 3 isoform a [Homo sapiens]
Length = 731
Score = 44.3 bits (103), Expect = 6e-05
Identities = 33/117 (28%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 55 EHQQLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPR 114
+ QQ Q Q PP PP++ P P+ P Q+ Q Q Q+ PHP
Sbjct: 32 QQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQQQQQQQQQQPPHPLSQLAQL 91
Query: 115 Q----HHGQLLEQP---QRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAG 164
Q H G L P + P S + P G+Q + D PS A +G
Sbjct: 92 QSQPVHPGLLHSSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSG 148
Score = 28.1 bits (61), Expect = 4.5
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 21/99 (21%)
Query: 84 PAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRGPGSRAHTPQSPQKHLG 143
P ++ ++ Q Q Q+ P PAP P+Q GP + PQ Q+
Sbjct: 22 PCPSSGDEQQQQQQQQQQQQPPPPAPPAAPQQ---------PLGPSLQPQPPQLQQQQQQ 72
Query: 144 TQGAVTDKEKERPPSCCAAAGAL--------LQHKSPSA 174
Q +++++PP + L L H SP+A
Sbjct: 73 QQ----QQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTA 107
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 43.1 bits (100), Expect = 1e-04
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 37/171 (21%)
Query: 14 CLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLLQAQPPPGLVPPSS 73
C++++ ++ I + + + + ++ST+ + L + Q P +
Sbjct: 740 CVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQDLVKFQ------------PSAK 787
Query: 74 APLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRP----PRQHHGQLLEQPQRGPG 129
AP P PA AP +EPLQ P PAP RP + G+ PQR P
Sbjct: 788 APSPPPPAEAP------KEPLQ---------PEPAPPRPSGPATAEDPGRRPVLPQRPPE 832
Query: 130 SRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
R PQ P G+ G + + + PP+ +G L G G +
Sbjct: 833 ER--PPQPP----GSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV 877
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 42.0 bits (97), Expect = 3e-04
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 64 PPPGLVPPSSAP----LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
PPPG PPS P P AP Q+P G P P +PP GQ
Sbjct: 107 PPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQP---PGAYPGQPPVTYPGQPPVPLPGQ 163
Query: 120 LLEQPQRG--PGSRAHTPQSPQKHLGTQGAVTD 150
P PGS TP P G++G +TD
Sbjct: 164 QQPVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 42.0 bits (97), Expect = 3e-04
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 64 PPPGLVPPSSAP----LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
PPPG PPS P P AP Q+P G P P +PP GQ
Sbjct: 107 PPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQP---PGAYPGQPPVTYPGQPPVPLPGQ 163
Query: 120 LLEQPQRG--PGSRAHTPQSPQKHLGTQGAVTD 150
P PGS TP P G++G +TD
Sbjct: 164 QQPVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 42.0 bits (97), Expect = 3e-04
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 64 PPPGLVPPSSAP----LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
PPPG PPS P P AP Q+P G P P +PP GQ
Sbjct: 107 PPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQP---PGAYPGQPPVTYPGQPPVPLPGQ 163
Query: 120 LLEQPQRG--PGSRAHTPQSPQKHLGTQGAVTD 150
P PGS TP P G++G +TD
Sbjct: 164 QQPVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 41.6 bits (96), Expect = 4e-04
Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 25/125 (20%)
Query: 62 AQPPPGLVPPSSAPLPA--APATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
A+P PG PP PLP +P AP +A PL +P P P P
Sbjct: 534 AEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPL-------PGSPEPPPAPPL------ 580
Query: 120 LLEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGV 179
PG P P GT G V PP AL + S LG GV
Sbjct: 581 --------PGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDAL--GRRDSELGPGV 630
Query: 180 LSRRP 184
+++P
Sbjct: 631 KAKKP 635
Score = 28.1 bits (61), Expect = 4.5
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 KELTAIVQKQQSLIHTQRERIDELERRLD----ELSTENRSLWEHQQLLQAQPPPGLVPP 71
+++ + ++ + + +I ELE++L EL T E + ++ PP P
Sbjct: 406 EQVALLTERLRDAENESMAKIAELEKQLSQARKELETLRERFSESTAMGASRRPP---EP 462
Query: 72 SSAPLPAAPATAPAAAARAQEPLQDQG 98
AP PAAP T P+A E L+++G
Sbjct: 463 EKAP-PAAP-TRPSALELKVEELEEKG 487
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 62 AQPPPGLVPPSSAPL-PAAPATAPA-AAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
AQ P PP AP PAAPA+ P + A A PL+ A PAP RPP G
Sbjct: 191 AQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGP 250
Query: 120 LL--EQPQRGPGSRAHT---PQSPQKHLG 143
++ P R G H P HLG
Sbjct: 251 IIWVSSPARSLGPLLHALLHPPLTCSHLG 279
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 62 AQPPPGLVPPSSAPL-PAAPATAPA-AAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
AQ P PP AP PAAPA+ P + A A PL+ A PAP RPP G
Sbjct: 191 AQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGP 250
Query: 120 LL--EQPQRGPGSRAHT---PQSPQKHLG 143
++ P R G H P HLG
Sbjct: 251 IIWVSSPARSLGPLLHALLHPPLTCSHLG 279
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 40.8 bits (94), Expect = 7e-04
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 26/112 (23%)
Query: 65 PPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQP 124
PP L P + +PAAP+ P A ++P P P P H L
Sbjct: 97 PPALQPRGAPAVPAAPSPGPLPA-------------RPSSPPPRPSLPSGPHRPVL---- 139
Query: 125 QRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALG 176
P S P+ P QG+VT +E+E+ P AGA P ALG
Sbjct: 140 ---PPSALAAPRPPLARPLPQGSVTAREQEQRPRSRRRAGA------PEALG 182
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 62 AQPPPGLVPPSSAPL-PAAPATAPA-AAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
AQ P PP AP PAAPA+ P + A A PL+ A PAP RPP G
Sbjct: 191 AQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGP 250
Query: 120 LL--EQPQRGPGSRAHT---PQSPQKHLG 143
++ P R G H P HLG
Sbjct: 251 IIWVSSPARSLGPLLHALLHPPLTCSHLG 279
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 40.8 bits (94), Expect = 7e-04
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 26/112 (23%)
Query: 65 PPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQP 124
PP L P + +PAAP+ P A ++P P P P H L
Sbjct: 97 PPALQPRGAPAVPAAPSPGPLPA-------------RPSSPPPRPSLPSGPHRPVL---- 139
Query: 125 QRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALG 176
P S P+ P QG+VT +E+E+ P AGA P ALG
Sbjct: 140 ---PPSALAAPRPPLARPLPQGSVTAREQEQRPRSRRRAGA------PEALG 182
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/86 (38%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 61 QAQPPP----GLVPPSSAPLPAAP--ATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPR 114
Q QPPP G V SSAPLP P AT P A +P Q QG P +
Sbjct: 273 QPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLA 332
Query: 115 QHHGQLLEQPQRGPGSRAHTPQSPQK 140
Q L PQ GP A Q PQ+
Sbjct: 333 QPAMSL--PPQPGPAVGAPAAQQPQQ 356
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 40.8 bits (94), Expect = 7e-04
Identities = 42/161 (26%), Positives = 63/161 (39%), Gaps = 16/161 (9%)
Query: 16 KELTAIVQKQQSLIHTQRERI--DELERRLDELS-TENRSLWEHQQLL---QAQPPPGLV 69
+EL I+ +++ + QR+++ D +++L E R+ +H Q + Q QPPP L
Sbjct: 938 EELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPAL- 996
Query: 70 PPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL-------LE 122
PP S P+P A P A A + P P + GQ +
Sbjct: 997 PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQ 1056
Query: 123 QPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAA 163
QP P A P P G G ++ PPS A
Sbjct: 1057 QPAGAPQPGAVPPGVPPP--GPHGPSPFPNQQTPPSMMPGA 1095
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 40.8 bits (94), Expect = 7e-04
Identities = 42/161 (26%), Positives = 63/161 (39%), Gaps = 16/161 (9%)
Query: 16 KELTAIVQKQQSLIHTQRERI--DELERRLDELS-TENRSLWEHQQLL---QAQPPPGLV 69
+EL I+ +++ + QR+++ D +++L E R+ +H Q + Q QPPP L
Sbjct: 907 EELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPAL- 965
Query: 70 PPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL-------LE 122
PP S P+P A P A A + P P + GQ +
Sbjct: 966 PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQ 1025
Query: 123 QPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAA 163
QP P A P P G G ++ PPS A
Sbjct: 1026 QPAGAPQPGAVPPGVPPP--GPHGPSPFPNQQTPPSMMPGA 1064
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 40.8 bits (94), Expect = 7e-04
Identities = 42/161 (26%), Positives = 63/161 (39%), Gaps = 16/161 (9%)
Query: 16 KELTAIVQKQQSLIHTQRERI--DELERRLDELS-TENRSLWEHQQLL---QAQPPPGLV 69
+EL I+ +++ + QR+++ D +++L E R+ +H Q + Q QPPP L
Sbjct: 938 EELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPAL- 996
Query: 70 PPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL-------LE 122
PP S P+P A P A A + P P + GQ +
Sbjct: 997 PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQ 1056
Query: 123 QPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAA 163
QP P A P P G G ++ PPS A
Sbjct: 1057 QPAGAPQPGAVPPGVPPP--GPHGPSPFPNQQTPPSMMPGA 1095
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 40.4 bits (93), Expect = 9e-04
Identities = 42/126 (33%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 26 QSLIHTQRERIDELERRLDELSTENRSLW-EHQQLLQAQPPPGLVPPSSAP--LPAAPAT 82
Q LI + E ELER L +L ENR+L E+ +L Q GL P S P +P +P +
Sbjct: 3485 QILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPTSPQS 3544
Query: 83 APAAAARAQEPL--QDQGQRSA----AAPHPAPDRPPRQHHGQLLEQPQRGPGSRAHTPQ 136
A A+ L Q +G+ A H QLLEQPQ T
Sbjct: 3545 PRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVS 3604
Query: 137 SPQKHL 142
SP L
Sbjct: 3605 SPSTSL 3610
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,866,831
Number of Sequences: 37866
Number of extensions: 627859
Number of successful extensions: 9952
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 953
Number of HSP's that attempted gapping in prelim test: 6130
Number of HSP's gapped (non-prelim): 3836
length of query: 185
length of database: 18,247,518
effective HSP length: 96
effective length of query: 89
effective length of database: 14,612,382
effective search space: 1300501998
effective search space used: 1300501998
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.