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Search of human proteins with 21361376
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
(464 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 1019 0.0
gi|160707881 formin 2 [Homo sapiens] 159 5e-39
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 124 2e-28
gi|163965366 nascent polypeptide-associated complex alpha subuni... 122 5e-28
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 122 9e-28
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 119 6e-27
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 118 1e-26
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 117 2e-26
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 108 1e-23
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 107 2e-23
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 107 2e-23
gi|150417989 cyclin K isoform 1 [Homo sapiens] 106 5e-23
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 104 1e-22
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 104 1e-22
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 104 2e-22
gi|47132519 Ras association and pleckstrin homology domains 1 is... 102 6e-22
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 100 3e-21
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 100 3e-21
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 100 3e-21
gi|7706501 WW domain binding protein 11 [Homo sapiens] 100 3e-21
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 100 4e-21
gi|239753972 PREDICTED: hypothetical protein [Homo sapiens] 99 6e-21
gi|116284392 mucin 2 precursor [Homo sapiens] 99 8e-21
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 99 8e-21
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 99 8e-21
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 99 1e-20
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 98 1e-20
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 98 2e-20
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 98 2e-20
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 97 4e-20
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 1019 bits (2636), Expect = 0.0
Identities = 464/464 (100%), Positives = 464/464 (100%)
Query: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL 60
MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL 60
Query: 61 TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT 120
TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT
Sbjct: 61 TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT 120
Query: 121 KQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIA 180
KQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIA
Sbjct: 121 KQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIA 180
Query: 181 FKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNG 240
FKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNG
Sbjct: 181 FKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNG 240
Query: 241 LPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASG 300
LPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASG
Sbjct: 241 LPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASG 300
Query: 301 VHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP 360
VHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP
Sbjct: 301 VHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP 360
Query: 361 APGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
APGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG
Sbjct: 361 APGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
Query: 421 VHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN 464
VHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN
Sbjct: 421 VHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN 464
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 159 bits (402), Expect = 5e-39
Identities = 128/339 (37%), Positives = 157/339 (46%), Gaps = 97/339 (28%)
Query: 217 PPAPPSLPAGP----PGVKRPPPPLMNGL----PPRPPLPES-LPPPPP----GGLPLPP 263
PP PP LP P P PP + G PP PPLP + +PPPPP G LPLPP
Sbjct: 877 PPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPP 936
Query: 264 MPPTG-------PAPSGPPGPP------QLPPPAP--GVHPPAPVVHPPASGVHPPAP-- 306
+P G P + PP PP LPPP P G+ PP P+ P +G+ PP P
Sbjct: 937 LPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPL---PGAGIPPPPPLP 993
Query: 307 --GVHPPAP----GVHPPAP----GVHPPT----SGVHPPAP----GVHPPAP----GVH 344
G+ PP P G+ PP P G+ PP +G+ PP P G+ PP P G+
Sbjct: 994 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1053
Query: 345 PPAP----GVHPPAP----GVHPPAP----GVHPP---PSAGV--HPQAPGVHPAAPAVH 387
PP P G+ PP P G+ PP P G+ PP P AG+ P PGV P
Sbjct: 1054 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPL 1113
Query: 388 PQAPGVHPPAP----GMHPQAP----GVHPQPP----GVHPSAP----GVHPQPP----G 427
P A G+ PP P G+ P P G+ P PP G+ P P G+ P PP G
Sbjct: 1114 PGA-GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG 1172
Query: 428 VHPSNP----GVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
+ P P G+ PP P+P + PP P IPPPPP
Sbjct: 1173 IPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPP 1211
Score = 158 bits (399), Expect = 1e-38
Identities = 130/342 (38%), Positives = 155/342 (45%), Gaps = 111/342 (32%)
Query: 217 PPAPPSLP-AGPPGVKRPPPPLMN------------GLPPRPPLP-ESLPPPPP---GGL 259
PP PP LP AG P PPPPL G+PP PPLP ++PPPPP G+
Sbjct: 909 PPPPPPLPGAGIP----PPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGI 964
Query: 260 PLPP------MPPTGPAPSG--PPGPPQ----LPPPAP----GVHPPAPVVHPPASGVHP 303
PLPP +PP P P PP PP +PPP P G+ PP P+ P +G+ P
Sbjct: 965 PLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL---PGAGIPP 1021
Query: 304 PAP----GVHPPAP----GVHPPAP----GVHPPT----SGVHPPAP----GVHPPAP-- 341
P P G+ PP P G+ PP P G+ PP +G+ PP P G+ PP P
Sbjct: 1022 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1081
Query: 342 --GVHPPAP----GVHPPAP----GVHPPAP----GVHPPP---SAGVHPQAP----GVH 380
G+ PP P G+ PP P G+ PP P G+ PPP AG+ P P G+
Sbjct: 1082 GAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1141
Query: 381 PAAPAVH------PQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPP------GV 428
P P P PG P P P PG PP P PGV PP G+
Sbjct: 1142 PPPPLPRVGIPPPPPLPGAGIPPP---PPLPGAGIPPP---PPLPGVGIPPPPPLPGVGI 1195
Query: 429 HPSNP----GVHPPTPM-----PPMLRPPLPSEGPGNIPPPP 461
P P G+ PP P+ PP PPLP G G IPPPP
Sbjct: 1196 PPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTG-IPPPP 1236
Score = 149 bits (377), Expect = 4e-36
Identities = 120/305 (39%), Positives = 146/305 (47%), Gaps = 74/305 (24%)
Query: 218 PAPPSLP-AGPPGVKRPPPPLMN-GLPPRPPLPES-LPPPPP----GGLPLPPMPPTGPA 270
P PP LP AG P PPPPL G+PP PPLP + +PPPPP G P PP+P G
Sbjct: 965 PLPPPLPGAGIP----PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1020
Query: 271 PSGP-PG---PPQLPPPAPGVHPPAPVVHPPASGVHPPAP----GVHPPAP----GVHPP 318
P P PG PP P P G+ PP P+ P +G+ PP P G+ PP P G+ PP
Sbjct: 1021 PPPPLPGAGIPPPPPLPGAGIPPPPPL---PGAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1077
Query: 319 AP----GVHPPT----SGVHPPAP----GVHPPAP----GVHPPAP----GVHPPAP--- 355
P G+ PP +G+ PP P G+ PP P G+ PP P G+ PP P
Sbjct: 1078 PPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1137
Query: 356 -GVHPPAP----GVHPPP---SAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGV 407
G+ PP P G+ PPP AG+ P P P P PGV P P P PGV
Sbjct: 1138 AGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPP-PPLPGVGIPPP---PPLPGV 1193
Query: 408 HPQPP------GVHPSAP----GVHPQP-PGVHPSNPGVHPPTPMPPMLRPP-LPSEGPG 455
PP G+ P P G+ P P P + P G+ PP P+ P+ PP LP G
Sbjct: 1194 GIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGI-PPPPLLPVSGPPLLPQVGSS 1252
Query: 456 NIPPP 460
+P P
Sbjct: 1253 TLPTP 1257
Score = 110 bits (274), Expect = 4e-24
Identities = 104/324 (32%), Positives = 129/324 (39%), Gaps = 82/324 (25%)
Query: 214 MEKPPAPPSL----PAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGP 269
+ +PP PPSL G PG +PP + S +P PP P
Sbjct: 807 ISQPPPPPSLLWSAGQGQPG-SQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTE 865
Query: 270 APSGPPGPPQLPPPAPGVH-------PPAPVVHPP---ASGVHPPAPGVHPPAPGV---- 315
+ S PG +PPP P + P + PP + + PP P PP PG
Sbjct: 866 SSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPP---PPLPGAGIPP 922
Query: 316 HPPAPGVH----PPTSGV----HPPAPGV----HPPAPGVHPPAP------GVHPPAP-- 355
PP PG PP G PP PG PP PG P P G+ PP P
Sbjct: 923 PPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLP 982
Query: 356 --GVHPPAP----GVHPP---PSAGVHPQAP----GVHPAAPAVHPQAPGVHPPAP---- 398
G+ PP P G+ PP P AG+ P P G+ P P G+ PP P
Sbjct: 983 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL---PGAGIPPPPPLPGA 1039
Query: 399 GMHPQAP----GVHPQPP----GVHPSAP----GVHPQPP----GVHPSNP----GVHPP 438
G+ P P G+ P PP G+ P P G+ P PP G+ P P G+ PP
Sbjct: 1040 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1099
Query: 439 TPMPPMLRPPLPSEGPGNIPPPPP 462
P+P + PP P IPPPPP
Sbjct: 1100 PPLPGVGIPPPPPLPGAGIPPPPP 1123
Score = 103 bits (258), Expect = 3e-22
Identities = 121/438 (27%), Positives = 152/438 (34%), Gaps = 191/438 (43%)
Query: 211 HFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPE--------------------- 249
H ++ + + + P GV PP ++GLP RPP P
Sbjct: 735 HHRILEAKSIQTSPTEEGGVLTLPP--VDGLPGRPPCPPGAESGPQTKFCSEISLIVSPR 792
Query: 250 ---------------SLPPPPPG------------------------------------- 257
S PPPPP
Sbjct: 793 RISVQLDSHQPTQSISQPPPPPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNS 852
Query: 258 -GLPLPP----------MPPTGPAPSGPP----------------------GPPQLPPPA 284
+P PP MP G P PP G LPPP
Sbjct: 853 CNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPP 912
Query: 285 P-----GVHPPAPVVHPPASGV--HPPAPGV----HPPAPGV----HPPAPGVHPPT--- 326
P G+ PP P+ P +G+ PP PG PP PG PP PG P
Sbjct: 913 PPLPGAGIPPPPPL---PGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPP 969
Query: 327 ---SGVHPPAP----GVHPPAP----GVHPPAP----GVHPPAP----GVHPPAP----G 363
+G+ PP P G+ PP P G+ PP P G+ PP P G+ PP P G
Sbjct: 970 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1029
Query: 364 VHPP---PSAGVHPQAP----GVHPAAP----AVHPQAP----GVHPPAP----GMHPQA 404
+ PP P AG+ P P G+ P P + P P G+ PP P G+ P
Sbjct: 1030 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1089
Query: 405 P----GVHPQPP----GVHPSAP----GVHPQPP----GVHPSNP----GVHPPTPMPPM 444
P G+ P PP G+ P P G+ P PP G+ P P G+ PP P+P +
Sbjct: 1090 PLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRV 1149
Query: 445 LRPPLPSEGPGNIPPPPP 462
PP P IPPPPP
Sbjct: 1150 GIPPPPPLPGAGIPPPPP 1167
Score = 79.0 bits (193), Expect = 9e-15
Identities = 59/144 (40%), Positives = 70/144 (48%), Gaps = 31/144 (21%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMN-GLPPRPPLPES-LPPPPP---GGLPLPP------MP 265
PP PP AG P PPPPL G+PP PPLP + +PPPPP G+P PP +P
Sbjct: 1130 PPPPPLPGAGIP----PPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIP 1185
Query: 266 PTGPAPS-GPPGPPQLP-------PPAPGVH---PPAPVVHPPASGVHPPAPGVHPPAPG 314
P P P G P PP LP PP PG+ PAP + PP +G+ PP P + P
Sbjct: 1186 PPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGI-PPPPLLPVSGPP 1244
Query: 315 VHPPAPGVHPPTSGV----HPPAP 334
+ P PT V PP P
Sbjct: 1245 LLPQVGSSTLPTPQVCGFLPPPLP 1268
Score = 40.4 bits (93), Expect = 0.003
Identities = 52/190 (27%), Positives = 59/190 (31%), Gaps = 48/190 (25%)
Query: 215 EKPPAPPSL-----------------PAGPPGVKRPPPPLMNGLPPRPPLPESLP----- 252
E+P APP+ P+G G P L LPESL
Sbjct: 230 EEPAAPPTAVSPQPGAFLGLDRFLLGPSGGAGEAPGSPDTEQALSALSDLPESLAAEPRE 289
Query: 253 ---PPPPGGLPL---PPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASG------ 300
PP PGGLP+ P +P PA P P P G P P G
Sbjct: 290 PQQPPSPGGLPVSEAPSLPAAQPAAKDSPSSTAFPFPEAG--PGEEAAGAPVRGAGDTDE 347
Query: 301 -----VHPPAPGVHPP---APGVHPPAP---GVHPPTSGVHPPAPGVHPPAPGVHPPAPG 349
AP P AP V AP G P P AP PG P+
Sbjct: 348 EGEEDAFEDAPRGSPGEEWAPEVGEDAPQRLGEEPEEEAQGPDAPAA-ASLPGSPAPSQR 406
Query: 350 VHPPAPGVHP 359
P P + P
Sbjct: 407 CFKPYPLITP 416
Score = 38.5 bits (88), Expect = 0.013
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 15/56 (26%)
Query: 217 PPAP-PSLPAGPPGVKRPPPPLM--NGLP----------PRPPLPESLPPPPPGGL 259
PPAP P LP PPG PPPPL+ +G P P P + LPPP P GL
Sbjct: 1218 PPAPAPPLP--PPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLPSGL 1271
Score = 37.4 bits (85), Expect = 0.029
Identities = 59/230 (25%), Positives = 70/230 (30%), Gaps = 24/230 (10%)
Query: 245 PPLPESLPPPPPG---GLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGV 301
P P + P PG GL + P+G A P P + P + P
Sbjct: 232 PAAPPTAVSPQPGAFLGLDRFLLGPSGGAGEAPGSPDTEQALSALSDLPESLAAEPREPQ 291
Query: 302 HPPAPGVHP--PAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHP 359
PP+PG P AP + P S P P P P G
Sbjct: 292 QPPSPGGLPVSEAPSLPAAQPAAKDSPSSTAFPFPEAGPGEEAAGAPVRGAGDTDEEGEE 351
Query: 360 PAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAP 419
A P S G AP V AP Q G P P AP P PS
Sbjct: 352 DAFEDAPRGSPG-EEWAPEVGEDAP----QRLGEEPEEEAQGPDAPAAASLPGSPAPSQR 406
Query: 420 GVHPQPPGVHP----------SNPGVHP---PTPMPPMLRPPLPSEGPGN 456
P P + P S+P P P P + R P PS G+
Sbjct: 407 CFKPYPL-ITPCYIKTTTRQLSSPNHSPSQSPNQSPRIKRRPEPSLSRGS 455
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 124 bits (311), Expect = 2e-28
Identities = 76/264 (28%), Positives = 100/264 (37%), Gaps = 17/264 (6%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM-PPTGPA----- 270
P +P P P G P P P S P P P P PT P+
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTS 1654
Query: 271 PSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH 330
PS P P P +P P +P P + P +P P +P P +P P +
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 331 PPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHP------PPSAGVHPQAPGVHPAAP 384
P +P P +P P +P P +P P +P P P S P +P P +P
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Query: 385 AVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPP----TP 440
P +P P +P P +P P P PS+P PQ P PS+P P +P
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Query: 441 MPPMLRPPLPSEGPGNIPPPPPTN 464
P P PS P + P PT+
Sbjct: 1835 TSPKYTPTSPSYSPSS-PEYTPTS 1857
Score = 122 bits (305), Expect = 9e-28
Identities = 74/255 (29%), Positives = 101/255 (39%), Gaps = 13/255 (5%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGL--PPRPPLPESLPPPPPGGLPLPPMPPTGP-APSGP 274
P P S G PG P P G P P + P PGG P P P +PS
Sbjct: 1567 PTPGS--PGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT-PQSPSYSPTSPSYS 1623
Query: 275 PGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
P P P +P P +P P + P +P P +P P +P P + P +P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 335 GVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVH 394
P +P P +P P +P P +P + P S P +P P +P+ P +P
Sbjct: 1684 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 395 PPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPP----TPMPPMLRPPLP 450
P +P P +P P P P++P P P P++P P +P P P P
Sbjct: 1743 PTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Query: 451 SEGPGN--IPPPPPT 463
S P + P PT
Sbjct: 1803 SYSPSSPRYTPQSPT 1817
Score = 120 bits (302), Expect = 2e-27
Identities = 73/257 (28%), Positives = 98/257 (38%), Gaps = 12/257 (4%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM-PPTGPA-----P 271
P PS P P P P S P P P P PT P+ P
Sbjct: 1624 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
S P P P +P P +P P + P +P P +P P +P P + P
Sbjct: 1684 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
+P P +P P +P P +P P +P + P S P +P P +P+ P +P
Sbjct: 1744 TSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN-YTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPP----TPMPPMLRP 447
P +P PQ+P P P PS+P P P P++P P TP P P
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP 1862
Query: 448 PLPSEGPGNIPPPPPTN 464
P P + P PT+
Sbjct: 1863 TSPKYSPTS-PKYSPTS 1878
Score = 119 bits (297), Expect = 8e-27
Identities = 69/250 (27%), Positives = 93/250 (37%), Gaps = 7/250 (2%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM-PPTGPA-----P 271
P PS P P P P S P P P P PT P+ P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
S P P P +P P +P P + P +P P +P P +P P + P
Sbjct: 1677 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
+P P +P P +P P +P P +P + P S P +P P +P+ P +P
Sbjct: 1737 TSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS-YSPTSPNYTPTSPNYSPTSPSYSPTSP 1795
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS 451
P +P P +P PQ P PS+P P P P++P P +P P
Sbjct: 1796 SYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTP 1855
Query: 452 EGPGNIPPPP 461
P P P
Sbjct: 1856 TSPKYSPTSP 1865
Score = 117 bits (292), Expect = 3e-26
Identities = 68/250 (27%), Positives = 93/250 (37%), Gaps = 7/250 (2%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM-PPTGPA-----P 271
P PS P P P P S P P P P PT P+ P
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1697
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
S P P P +P P +P P + P +P P +P P +P P + P
Sbjct: 1698 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTP 1757
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
+P P +P P +P P +P P +P + P S P +P P++P PQ+P
Sbjct: 1758 TSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPS-YSPTSPSYSPTSPSYSPSSPRYTPQSP 1816
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS 451
P +P P +P P P P++P P P P++P P +P P
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSP 1876
Query: 452 EGPGNIPPPP 461
P P P
Sbjct: 1877 TSPTYSPTTP 1886
Score = 115 bits (288), Expect = 8e-26
Identities = 68/250 (27%), Positives = 94/250 (37%), Gaps = 7/250 (2%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM-PPTGPA-----P 271
P PS P P P P S P P P P PT P+ P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
S P P P +P P +P P + P +P P +P P +P P + P
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
+P P +P P +P P +P P +P + P S PQ+P P++P+ P +P
Sbjct: 1772 TSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPS-YSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS 451
P +P P +P P P P++P P P P++P P +P P
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSP 1890
Query: 452 EGPGNIPPPP 461
P P P
Sbjct: 1891 TSPTYSPTSP 1900
Score = 115 bits (287), Expect = 1e-25
Identities = 62/221 (28%), Positives = 88/221 (39%), Gaps = 3/221 (1%)
Query: 242 PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPP-APVVHPPASG 300
P P P S P P P P P +PS P P P +PG + P +P P +
Sbjct: 1563 PAWSPTPGSPGSPGPSS-PYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 301 VHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP 360
P +P P +P P +P P + P +P P +P P +P P +P P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 361 APGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
+P + P S P +P P +P+ P +P P +P P +P P P P++P
Sbjct: 1682 SPS-YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1740
Query: 421 VHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPP 461
P P P++P P +P P P P P
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSP 1781
Score = 111 bits (277), Expect = 2e-24
Identities = 71/257 (27%), Positives = 98/257 (38%), Gaps = 12/257 (4%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM-PPTGPA-----P 271
P PS P P P P S P P P P PT P+ P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1732
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
S P P P +P P +P P + P +P P +P P +P P + P
Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
+P P +P P +P P +P P +P + P S P +P P +P+ P +P
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPS-YSPSSPSYSPTSPKYTPTSPSYSPSSP 1851
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPP----TPMPPMLRP 447
P +P P +P P P P++P P P P++P P TP P P
Sbjct: 1852 EYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSP 1911
Query: 448 PLPSEGPGNIPPPPPTN 464
P+ P + P PT+
Sbjct: 1912 TSPTYSPTS-PKYSPTS 1927
Score = 108 bits (270), Expect = 1e-23
Identities = 68/256 (26%), Positives = 91/256 (35%), Gaps = 12/256 (4%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM-PPTGPA-----P 271
P PS P P P P S P P P P PT P+ P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1739
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
S P P P +P P +P P + P +P P +P P +P P + P
Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHP------PPSAGVHPQAPGVHPAAPA 385
+P P +P P +P P +P P +P P P S P +P P +P
Sbjct: 1800 TSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPK 1859
Query: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPML 445
P +P P +P P +P P P P++P P P P++P P +P
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 446 RPPLPSEGPGNIPPPP 461
P P P P
Sbjct: 1920 SPKYSPTSPTYSPTSP 1935
Score = 107 bits (266), Expect = 3e-23
Identities = 66/243 (27%), Positives = 89/243 (36%), Gaps = 7/243 (2%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPP-MPPTGPA-----P 271
P PS P P P P S P P P P PT P+ P
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
S P P P +P P +P P + P +P P +P P +P P + P
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP 1827
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
+P P +P P +P P +P P +P + P S P +P P +P P P
Sbjct: 1828 SSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPK-YSPTSPKYSPTSPKYSPTSPTYSPTTP 1886
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS 451
P +P P +P P P P++P P P P++P P +P P P
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946
Query: 452 EGP 454
P
Sbjct: 1947 YSP 1949
Score = 99.4 bits (246), Expect = 6e-21
Identities = 64/247 (25%), Positives = 90/247 (36%), Gaps = 15/247 (6%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM-PPTGPA-----P 271
P PS P P P P + P P P P PT P+ P
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
+ P P P +P P +P P + P +P P +P P +P P + P
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHP------PPSAGVHPQAPGVHPAAPA 385
+P P +P P +P P +P P +P P P S P P P +P
Sbjct: 1835 TSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPP---GVHPSNPGVHPPTPMP 442
P +P P +P P +P P P P++P P P P++PG P +P
Sbjct: 1895 YSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTY 1954
Query: 443 PMLRPPL 449
+ P +
Sbjct: 1955 SLTSPAI 1961
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 122 bits (307), Expect = 5e-28
Identities = 90/297 (30%), Positives = 109/297 (36%), Gaps = 60/297 (20%)
Query: 217 PPAPPSLPAGPP---GVKRPP---PPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
PP+P PA P G PP PP G P PLP+ P P LP P P P+
Sbjct: 1016 PPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPS 1075
Query: 271 PSGPPGPPQLPPPAP-----------GVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPA 319
G P PP PP+P PPA P G+ P P P PP+
Sbjct: 1076 LKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPS 1135
Query: 320 PG---VHPPTSGVHPPAPGVHPPAP--GVHPPAPGVHPPAPGVHPPAP------------ 362
P PP G P P PP+P G+ P P P P PP+P
Sbjct: 1136 PKGGLATPPPKGA-PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGA 1194
Query: 363 -----GVHPPPSAGVHPQAPGVHPAAPAVHPQAP--GVHPPAPGMHPQAPGVHPQPPGVH 415
P P G+ +P P PA P +P G+ P+P P P P P
Sbjct: 1195 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1254
Query: 416 PSAPGVHPQPPGVHPSNPGVHPPT-------------PMPPMLRPPLPSEGPGNIPP 459
P+ P PP P+ P PP+ P P ++ PP P GP PP
Sbjct: 1255 PATP-----PPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPP 1306
Score = 115 bits (287), Expect = 1e-25
Identities = 99/280 (35%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 217 PPAPPSLPA--GPPGVKRPP---PPLMNG---LPPR---PPLPESLPPPPPGGLPLPPMP 265
PP+P PA P G PP PP G PP P P + PP P GGL PP
Sbjct: 1087 PPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK 1146
Query: 266 --PTGPA--PSGPPG-----PPQLPPPAPGVHPPAP---VVHPPASGVHPPAPGVHPPAP 313
PT PA P P G PP+ P P PP+P + P G P P PP+P
Sbjct: 1147 GAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGA-PTTPAATPPSP 1205
Query: 314 --GVHPPAPGVHPPTSGVHPPAP--GVHPPAPGVHPPAPGVHPPAP--GVHPPAPGVHPP 367
G+ P+P P T PP+P G+ P+P P P PP+P G P P P
Sbjct: 1206 KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPT 1265
Query: 368 PSAGVHPQAPGVHPAAPAVHPQAPG---VHPPAP--GMHPQAPGVHPQPPGVHPSAPGVH 422
P A P G P H AP V PP+P G P P PP P +P
Sbjct: 1266 PPAATPPSLKGGLATPP--HKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGS 1323
Query: 423 P--QPPGVHPSNPGVHPPTPM-PPMLRPPLPSEGPGNIPP 459
P PP P+ P V PP+P P L PS G P
Sbjct: 1324 PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTP 1363
Score = 107 bits (266), Expect = 3e-23
Identities = 85/272 (31%), Positives = 102/272 (37%), Gaps = 45/272 (16%)
Query: 213 KMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRP------PLPESLPPPPPGGLPLPPMPP 266
K PAP +PA P P PP PP P P P+ P PP P P P
Sbjct: 920 KARATPAPKGIPASPSPKGAPTPPAAT--PPSPKGGPATPSPKWAPTPPAATPPSPKGGP 977
Query: 267 TGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPT 326
P+P G P PP PP+P G P+P P P V PP+P P
Sbjct: 978 ATPSPKGAPTPPAATPPSP------------KGGPATPSPKGAPTPPAVTPPSPKGSPAA 1025
Query: 327 SGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAV 386
+ P P P PP+P P A P P P A P G PA P++
Sbjct: 1026 T----PFPKGASTPPAATPPSPKGSPAA----TPLPKGAPTTPAATLPSPKG-GPATPSL 1076
Query: 387 H--PQAPGVHPPAPGMHPQAPGVH--PQPPGVHPSAP--GVHPQPPGVHPSNPGVHPPTP 440
P P PP+P P P P PP P +P G+ P P+ P PP+P
Sbjct: 1077 KGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSP 1136
Query: 441 M------PPMLRPPLPSEGP----GNIPPPPP 462
PP P P+ P G + PPP
Sbjct: 1137 KGGLATPPPKGAPTTPAATPPSPKGGLATPPP 1168
Score = 102 bits (255), Expect = 6e-22
Identities = 91/282 (32%), Positives = 103/282 (36%), Gaps = 46/282 (16%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLP-----LPPMPPTGPA- 270
PP+P PA PP P PP P L L PP G P PP P GPA
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATP----PSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT 1303
Query: 271 --PSGPPGPPQLPPPAP----GVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHP 324
P G P PP PP+P G PP PPA V PP+P P P P + G
Sbjct: 1304 SPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPA--VTPPSPKGTPTLPATTPSSKGGPT 1361
Query: 325 PTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH-PPPSAGVHPQAPGVHPAA 383
S P P P A H P + PP+P P P P S V P +P PA
Sbjct: 1362 TPSSKEGPTP---PAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPAT 1418
Query: 384 P-----AVHPQAPGVHPPA--------------PGMHPQAPGVHPQP--PGVHPSAPGVH 422
P A P + PPA P P P P P V P +P
Sbjct: 1419 PVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEP 1478
Query: 423 PQPPGVHPSNPGVHPPTPMPPMLRPPLPS---EGPGNIPPPP 461
P P V S+ P PM P LP+ P +P P
Sbjct: 1479 PAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATP 1520
Score = 102 bits (254), Expect = 7e-22
Identities = 89/271 (32%), Positives = 102/271 (37%), Gaps = 32/271 (11%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGL--PLPPMPPTGPA--PS 272
P P + P P G P P P P + PP P GGL P P PT PA P
Sbjct: 1195 PTTPAATPPSPKGGLATPSP-----KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1249
Query: 273 GPPGPPQLPPPAPGVHPPAPVVHPPASGVH-PPAPGVHPPAPGVHPPAPGVHPPTSGVH- 330
P G P PPP PPA G+ PP G PA V PP+P P TS
Sbjct: 1250 SPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAV-VTPPSPKGGPATSPPKG 1308
Query: 331 -PPAPGVHPPAPGVHP--PAPGVHPPAPGVHPPAPGVHP-----PPSAGVHPQAPG---- 378
P P PP+P P P P P P V PP+P P PS+ P P
Sbjct: 1309 APTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEG 1368
Query: 379 -VHPAAPAVHPQAPGVHPPAPGMHPQAPGV--HPQPPGVHPSAPGVHPQPP-----GVHP 430
PAA H P + PP+P P P P P V P +P P P P
Sbjct: 1369 PTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATP 1428
Query: 431 SNPGVHPPTPMPPMLRPPLPSEGPGNIPPPP 461
S + PP P L+ + P P P
Sbjct: 1429 SKGDLTPPAVTPVSLKKAPATSAPKGGPATP 1459
Score = 90.5 bits (223), Expect = 3e-18
Identities = 83/281 (29%), Positives = 104/281 (37%), Gaps = 46/281 (16%)
Query: 217 PPAPPSLPAGPP--GVKRPP---PPLMNGLPPRPPLPESLPPPP----PGGLPLPPMPPT 267
PP+P PA P G PP PP G P PP P+ P PP P P +P T
Sbjct: 1294 PPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPP-PKGAPTPPAVTPPSPKGTPTLPAT 1352
Query: 268 GPAPSGPPGPPQ-----LPPPAPGVHPPAPVVHPPASGVHP--PAPGVHPPAPGVHPPAP 320
P+ G P P PP A H P + PP+ P P+P P +P V P +P
Sbjct: 1353 TPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSP 1412
Query: 321 -----------GVHPPTSG-VHPPA---------PGVHPPAPGVHPPAPGVHPPAPGVHP 359
G P+ G + PPA P P G P+ P P V P
Sbjct: 1413 KKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTP 1472
Query: 360 PAPGVHPPPSAGVHPQAPGVHPAAPAV--HPQAPGVHPPAPGMHPQAPGVHPQPPGVHPS 417
P+P P P +P PA PA P P V P +P P P P + P+
Sbjct: 1473 PSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDP--IAPT 1530
Query: 418 APGVHPQPPGVHPSNPGVHPPTPMPPMLRP----PLPSEGP 454
A + + P + PP P + P P E P
Sbjct: 1531 ATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAP 1571
Score = 81.3 bits (199), Expect = 2e-15
Identities = 87/323 (26%), Positives = 106/323 (32%), Gaps = 86/323 (26%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPR--PPLPESLP--------------PPPPGGLP 260
PP+P P PP P PP + P+ P LP + P P PP P
Sbjct: 1317 PPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376
Query: 261 --------LPPMPPTGPA---PSGPPGPPQLPPPAPGVHPPAPVVHP------------- 296
PP P GPA P G P P + P +P P PV
Sbjct: 1377 SHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPP 1436
Query: 297 ----------------------PASGVHPPAPGVHPPAPGVHPPAP----GVHPPTSGVH 330
P+S P P V PP+P PPAP P
Sbjct: 1437 AVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSP-KEPPAPKQVATSSSPKKAPA 1495
Query: 331 PPAPGVHPPAPGVHPPAPGVHPPAPG-----VHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
PAP P P V P +P P P + P A + A + P+ + PA
Sbjct: 1496 TPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTV 1555
Query: 386 VHP-QAPGVHPPAPGMHPQAPGVH--PQPPGVHPSAPGVHPQ------PPGVHPSNPGVH 436
P + P + P P P P PP V PS P PP V +P
Sbjct: 1556 PSPKKTPAI--PTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSP--- 1610
Query: 437 PPTPMPPMLRPPLPSEGPGNIPP 459
P PP + PP P +GP P
Sbjct: 1611 KEAPTPPAVTPPSPEKGPATPAP 1633
Score = 74.3 bits (181), Expect = 2e-13
Identities = 80/276 (28%), Positives = 98/276 (35%), Gaps = 49/276 (17%)
Query: 218 PAPPSLPAGPPGVKRPPP---------PLMNGLPPRPPLPESLPPPPPGGL------PLP 262
P+P + P KRPP P+ N P P+ S P P
Sbjct: 794 PSPLGVSVSPQ-TKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPAT 852
Query: 263 PMPPTGPAPSGPPGPPQLPPPAP-GVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPG 321
PT P+P G P P + P +P GV P P P S V+ P P P P AP
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGVTLP-PKETPTPSVVNLPFPKEGPATPAPKQ-APA 910
Query: 322 VHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP-PSAGVHPQAPGVH 380
+ +S P PAP P +P +P P P PP P G +P
Sbjct: 911 LSMTSSS---PKKARATPAPKGIPASP-----SPKGAPTPPAATPPSPKGGPATPSPKWA 962
Query: 381 PAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVH--PSNPGVHPP 438
P PA P +P P P +P P PP P +P P P P+ P V PP
Sbjct: 963 PTPPAATPPSPKGGPATP-----SPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPP 1017
Query: 439 TP--------------MPPMLRPPLPSEGPGNIPPP 460
+P PP PP P P P P
Sbjct: 1018 SPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLP 1053
Score = 65.9 bits (159), Expect = 8e-11
Identities = 83/295 (28%), Positives = 99/295 (33%), Gaps = 52/295 (17%)
Query: 218 PAPPSLPAG-PPGVKRPPP-PLMNGLPPRPPLPESLPPPPPGGLPLPPMPPT------GP 269
P+P PAG PPG K+ + L P P+ P G T P
Sbjct: 735 PSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSP 794
Query: 270 APSGPPGPPQL--PPPAPGVHPPAPVVHPPASGVHPPAPGVHP------------PAP-- 313
+P G PQ PP G P + +S V P P PA
Sbjct: 795 SPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTH 854
Query: 314 GVHPPAPGVHPPTSGVHPPAP-GVH-PPAPGVHPPAPGVHPPAPGVHPPAPGVHP----- 366
PP+P P S V P +P GV PP P + P G PAP P
Sbjct: 855 SPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMT 914
Query: 367 ---PPSAGVHPQAPGV--------HPAAPAVHPQAP--GVHPPAPGMHPQAPGVHPQPPG 413
P A P G+ P PA P +P G P+P P P P P
Sbjct: 915 SSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPK 974
Query: 414 VHPSAPGVH--PQPPGVHPSNPGVHPPT------PMPPMLRPPLPSEGPGNIPPP 460
P+ P P PP P +P P T P PP + PP P P P P
Sbjct: 975 GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFP 1029
Score = 58.5 bits (140), Expect = 1e-08
Identities = 72/269 (26%), Positives = 94/269 (34%), Gaps = 28/269 (10%)
Query: 215 EKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPL----PESLPPPP--------PGGLPLP 262
++PPAP + K P P G P P + P+ +P P P L
Sbjct: 1476 KEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLS 1535
Query: 263 PMPPTGPAPSGPPGPPQLPPPAPGVHP--PAPVVHP--PASGVHPPAPGVHP------PA 312
P AP PP + P+P P P P P P+S P V P P+
Sbjct: 1536 KKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPS 1595
Query: 313 PGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHP--PAPGVHPPAPGVHPPAPGVHPPPSA 370
P P V P+ P P V PP+P P PAP P +P V P + P A
Sbjct: 1596 PKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPA 1655
Query: 371 GVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHP 430
V + P A P G P A AP P P+ G PQ
Sbjct: 1656 SVTCKMGATVPQASKGLPAKKG--PTALKEVLVAPAPESTPIITAPTRKG--PQTKKSSA 1711
Query: 431 SNPGVHPPTPMPPMLRPPLPSEGPGNIPP 459
++P + P + PL + P + P
Sbjct: 1712 TSPPICPDPSAKNGSKGPLSTVAPAPLLP 1740
Score = 55.5 bits (132), Expect = 1e-07
Identities = 67/240 (27%), Positives = 81/240 (33%), Gaps = 20/240 (8%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGP 277
P P P P V P P P +LP P P P+ P
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTA 1531
Query: 278 PQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPA--PG 335
L P P + PPA V P P P P P +S PPA P
Sbjct: 1532 TLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASS---PPAVTPS 1588
Query: 336 VHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHP 395
+ AP P + PPA V P+P P P A V P +P PA P AP P
Sbjct: 1589 TYKGAPS---PKELLIPPA--VTSPSPKEAPTPPA-VTPPSPEKGPATP-----APKGTP 1637
Query: 396 PAPGMHPQAPGVHP-QPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGP 454
+P + P + P P V PQ P+ G PT + +L P P P
Sbjct: 1638 TSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKG---PTALKEVLVAPAPESTP 1694
Score = 54.7 bits (130), Expect = 2e-07
Identities = 80/281 (28%), Positives = 94/281 (33%), Gaps = 35/281 (12%)
Query: 215 EKPPAPPSLPAG-PPGV-----KRPPPPLMNGLPPR--PPLPESLPPPPPGGLPLPPMPP 266
E P P S A PP V K P P +PP P P+ P PP P P P
Sbjct: 1569 EAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGP 1628
Query: 267 TGPAPSGPPGPPQLPPPAPGVHPPAP--------VVHPPASGVHPPAPG-------VHPP 311
PAP G P P + P + P +P P AS P G + P
Sbjct: 1629 ATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAP 1688
Query: 312 APGVHP--PAPGVHPP----TSGVHPPAPGVHPPAPGVHPPAPGVHP-PAPGVHPPAPGV 364
AP P AP P +S PP G P V P P V +
Sbjct: 1689 APESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKT 1748
Query: 365 HPPPSAGVHPQAPGVHPAAPAVHP-QAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP 423
A P+ P P + A P A P + P PP P AP P
Sbjct: 1749 AKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVP 1808
Query: 424 QPPGVH---PSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPP 461
P PS+PG+ +P P L P E IPP P
Sbjct: 1809 TLPPKQQFLPSSPGLVLESPSKP-LAPADEDELLPLIPPEP 1848
Score = 37.7 bits (86), Expect = 0.022
Identities = 52/228 (22%), Positives = 76/228 (33%), Gaps = 18/228 (7%)
Query: 236 PLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVH 295
P+ + L L + P PP P P P A P P P+ P V
Sbjct: 27 PMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASP----FPSPSTIASTPLEVPF 82
Query: 296 PPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAP 355
P +S G P AP P G + + +P + P G + + A
Sbjct: 83 PQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVAL 142
Query: 356 GVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVH 415
H PP+ P + V + + AP + P P ++ P V
Sbjct: 143 APHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAP-IAPSEP-----KTNLNKVPSEVV 196
Query: 416 PSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPT 463
P+ G P PP + + P H TPM + G ++P PT
Sbjct: 197 PNPKGT-PSPPCIVSTVP-YHCVTPMASI------QSGVASLPQTTPT 236
Score = 37.0 bits (84), Expect = 0.038
Identities = 70/274 (25%), Positives = 81/274 (29%), Gaps = 61/274 (22%)
Query: 245 PPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG----PPQLPPPAPGVHPPAPVVHPPASG 300
P L SL P PL P G AP+ G P G AP HP G
Sbjct: 634 PLLKSSLITPTVAAFPLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEG 693
Query: 301 VHPPAPGVHPPAPGVHPPAPGVH----PPTSGVHPPAPGVHPPAPGVHPPA---PGV--- 350
P V P A P AP P + V P P+P + PPA PG
Sbjct: 694 TLTTLPLV-PTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSL-PPAGTPPGTKKV 751
Query: 351 ----HPPAPGVHPPAPGVHPPPSAGVHPQ----------APGVHPAAPAVHPQAPGVHPP 396
H A +P P +G A P +V PQ
Sbjct: 752 DGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTK 811
Query: 397 APGMHPQAP------------------------GVHPQPPGVH---PSAPGVHPQPPGVH 429
P P G P H P +P P P V
Sbjct: 812 KGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVT 871
Query: 430 PSNP-GVHPP---TPMPPMLRPPLPSEGPGNIPP 459
P +P GV P TP P ++ P P EGP P
Sbjct: 872 PLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAP 905
Score = 31.6 bits (70), Expect = 1.6
Identities = 34/127 (26%), Positives = 44/127 (34%), Gaps = 11/127 (8%)
Query: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPG 286
P G PP + + LP P + P PP P P P LPP
Sbjct: 1758 PKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVS-LPLAPSPVPTLPPKQQF 1816
Query: 287 V-HPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAP---GVHPPTSGVHPPAP---GVHPP 339
+ P V+ P+ P AP + PP P GV + V+ P P G+ P
Sbjct: 1817 LPSSPGLVLESPSK---PLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVP 1873
Query: 340 APGVHPP 346
P P
Sbjct: 1874 TPSAKQP 1880
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 122 bits (305), Expect = 9e-28
Identities = 100/285 (35%), Positives = 107/285 (37%), Gaps = 47/285 (16%)
Query: 216 KPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLP--PPPPGGL----PLPPMPPTGP 269
KP PPS PPG + PPP P PP P P PPP GG P PP P GP
Sbjct: 46 KPQGPPS----PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 101
Query: 270 APSG--------PPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPG 321
P G PPG PQ PPP G P P PP PP G + P G PP
Sbjct: 102 PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP-PPPPGKPQGPPPQGGNKP-QGPPPPGKP 159
Query: 322 VHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAP---- 377
PP G + PP PP G + P PP PPP G PQ P
Sbjct: 160 QGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 219
Query: 378 ---GVHP---------AAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQ- 424
G P +P PQ P PP G PQ P P P P G PQ
Sbjct: 220 KPQGPPPQGDNKSQSARSPPGKPQGP---PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 276
Query: 425 -PPGVHPSNPGVHPPTPMPPMLRPPLPSEGP----GNIP--PPPP 462
PP P P + PP +GP GN P PPPP
Sbjct: 277 PPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPP 321
Score = 117 bits (293), Expect = 2e-26
Identities = 93/258 (36%), Positives = 99/258 (38%), Gaps = 29/258 (11%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSG--P 274
PP + P GPP PP G PP+ PPPPPG P P P G P G P
Sbjct: 40 PPQGGNKPQGPPS----PPGKPQGPPPQGGNQPQGPPPPPG-KPQGPPPQGGNKPQGPPP 94
Query: 275 PGPPQLPPP------APGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSG 328
PG PQ PPP +P P P PP G P P PP PG P P PP G
Sbjct: 95 PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP---PPPPG-KPQGP---PPQGG 147
Query: 329 VHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHP 388
P P PP PP G + PP PPP G PQ P P P P
Sbjct: 148 NKPQGP--PPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 205
Query: 389 QAPGVHP--PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLR 446
G P P P PQ P +P PQ P P G P P PP +
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGP---PPQGGNQPQGPPPPPGK 262
Query: 447 PPLPSEGPGNIP--PPPP 462
P P GN P PPPP
Sbjct: 263 PQGPPPQGGNKPQGPPPP 280
Score = 115 bits (288), Expect = 8e-26
Identities = 94/276 (34%), Positives = 102/276 (36%), Gaps = 44/276 (15%)
Query: 218 PAPPSLPAGPP--------------GVKRPPPPLMNGLPPRPPLPESLP--PPPPGGL-- 259
P PP P GPP G + PPP P PP P P PPP GG
Sbjct: 153 PPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212
Query: 260 --PLPPMPPTGPAPSG---------PPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGV 308
P PP P GP P G PPG PQ PPP G P P PP PP G
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPP-PPGKPQGPPPQGG 271
Query: 309 HPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPP 368
+ P G PP PP G PP PP G + P PP PPP
Sbjct: 272 NKPQ-GPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 330
Query: 369 SAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGV 428
G PQ P P PQ P PP G ++ P P P G +PQ P
Sbjct: 331 QGGNKPQGP-----PPPGKPQGP---PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGP-- 380
Query: 429 HPSNPGVHPPTPM-PPMLRPPLPSEGP-GNIPPPPP 462
P G +P P PP +P P P G P PP
Sbjct: 381 -PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
Score = 115 bits (287), Expect = 1e-25
Identities = 97/304 (31%), Positives = 103/304 (33%), Gaps = 58/304 (19%)
Query: 213 KMEKPPAPPSLPAGPP--------------GVKRPPPPLMNGLPPRPPLPESLPPPPPGG 258
K P +PP P GPP G + PPP P PP P PPP G
Sbjct: 107 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 166
Query: 259 ------LPLPPMPPTGPAPSG---------PPGPPQLPPPAPGVHPPAPVVHPPASGVHP 303
PP P GP P G PPG PQ PPP G P P PP P
Sbjct: 167 DNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP--PPPGKPQGP 224
Query: 304 PAPGVHPPAPGVHPPA-PGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAP 362
P G + PP P PP G P P P P PP G P P PP
Sbjct: 225 PPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP--PPPGK 282
Query: 363 GVHPPPSAGV----------HPQAP----GVHPAAPAVHPQAPGVHPPAPGMHPQAPGVH 408
PPP G PQ P G P P P P PP G PQ P
Sbjct: 283 PQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 342
Query: 409 PQPPGVHP----------SAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIP 458
+P G P S PG PP +NP PP +P P G P
Sbjct: 343 GKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGP 402
Query: 459 PPPP 462
P PP
Sbjct: 403 PRPP 406
Score = 108 bits (269), Expect = 1e-23
Identities = 84/243 (34%), Positives = 91/243 (37%), Gaps = 32/243 (13%)
Query: 216 KPPAPPSL-------PAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGG------LPLP 262
KP PP P PPG + PPP P PP P PPP G P
Sbjct: 179 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSP 238
Query: 263 PMPPTGPAPSG---------PPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAP 313
P P GP P G PPG PQ PPP G P P PP PP G
Sbjct: 239 PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP--PPPGKPQGPPPQGGSKSRS 296
Query: 314 GVHPPA-PGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGV 372
PP P PP G P P P P PP G P P PP PPP G
Sbjct: 297 SRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP--PPPGKPQGPPPQGGS 354
Query: 373 HPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSA-PGVHPQPP-GVHP 430
++ P P PQ G +P P P G +PQ P P+ P P+PP G P
Sbjct: 355 KSRSARSPPGKPQGPPQQEGNNPQGP---PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRP 411
Query: 431 SNP 433
S P
Sbjct: 412 SRP 414
Score = 84.0 bits (206), Expect = 3e-16
Identities = 67/197 (34%), Positives = 71/197 (36%), Gaps = 10/197 (5%)
Query: 270 APSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGV 329
+PS G PQ PP G P P P PP G P P P P PP G
Sbjct: 28 SPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 87
Query: 330 HPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQ 389
P P PP PP G +P PP PPP G PQ P P P P
Sbjct: 88 KPQGP--PPPGKPQGPPPQGDKSRSPR-SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 144
Query: 390 APGVHP--PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRP 447
G P P P PQ P +P PQ P P G P P PP +P
Sbjct: 145 QGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGP---PPQGGNQPQGPPPPPGKP 201
Query: 448 PLPSEGPGNIP--PPPP 462
P GN P PPPP
Sbjct: 202 QGPPPQGGNKPQGPPPP 218
Score = 42.4 bits (98), Expect = 0.001
Identities = 29/78 (37%), Positives = 30/78 (38%), Gaps = 16/78 (20%)
Query: 218 PAPPSLPAGPP---GVK----RPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
P PP P GPP G K R PP G P + PPPP GG P P P
Sbjct: 339 PPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 398
Query: 271 PSGP---------PGPPQ 279
P GP PPQ
Sbjct: 399 PQGPPRPPQGGRPSRPPQ 416
Score = 38.9 bits (89), Expect = 0.010
Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 216 KPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPP 275
KP PP P + PPP G P +P P P P G PP PP G PS PP
Sbjct: 365 KPQGPPQQEGNNP---QGPPPPAGGNPQQPQAP---PAGQPQG---PPRPPQGGRPSRPP 415
Score = 32.0 bits (71), Expect = 1.2
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
Query: 403 QAPGVHPQPPGVHPSAPGVHPQPPGVHPSNP-------GVHPPTPMPPMLRPPLPSEGPG 455
++P + P P G PQ P P P G P P PP +P P G
Sbjct: 27 ESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 86
Query: 456 NIP--PPPP 462
N P PPPP
Sbjct: 87 NKPQGPPPP 95
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 119 bits (298), Expect = 6e-27
Identities = 95/281 (33%), Positives = 102/281 (36%), Gaps = 36/281 (12%)
Query: 213 KMEKPPAPPSLPAGPP--GVKRPPPPLMNGLPPRPPLP--ESLPPPPPGGLPLPPMPPTG 268
K + PP PP P GPP G +P P G P PP +S P P G P P P G
Sbjct: 46 KPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 105
Query: 269 PAPSG---PPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPP 325
P G PPG PQ PPP G P P PP PP G +P P P PP
Sbjct: 106 NQPQGPPPPPGKPQGPPPQGGNRPQGP--PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPP 163
Query: 326 TSGVHPPAPGVHPPAPGVHPPAPGVH---PPAPG---------------VHPPAPGVHPP 367
G P P P P PP G PP PG PP PP
Sbjct: 164 QGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPP 223
Query: 368 PSAGVHPQAPGVHPAAPAVHPQAPGVHP--PAPGMHPQAPGVHPQPPGVHPSAPGVHPQP 425
P G PQ P P P P G P P P PQ P +P PQ
Sbjct: 224 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQG 283
Query: 426 PGVHPSNPGVHPPTPMPPM----LRPPLPSEGPGNIPPPPP 462
P P G +P P PP +P P G PP PP
Sbjct: 284 P---PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 321
Score = 118 bits (295), Expect = 1e-26
Identities = 94/267 (35%), Positives = 100/267 (37%), Gaps = 34/267 (12%)
Query: 216 KPPAPPSL------PAGPPGVKRPPPPLMNGLPPRPPLPESLP--PPPPGGL----PLPP 263
KP PP P PPG + PPP P PP P P PPP GG P PP
Sbjct: 76 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPP 135
Query: 264 MPPTGPAPSG--------PPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGV 315
P GP P G PPG PQ PPP G P P P PP G P P
Sbjct: 136 GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGP-- 193
Query: 316 HPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPG--VHPPPSAGVH 373
PP PP G + P P PP G P P PP PG PPP G
Sbjct: 194 PPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGP---PPPPGKPQGPPPQGGNK 250
Query: 374 PQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNP 433
PQ P P P P G + P P PQ G +P P P P G +P P
Sbjct: 251 PQGP-PPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP---PPPAGGNPQQP 306
Query: 434 GVHPPTPMPPMLRPPLPSEGPGNIPPP 460
PP P PP P +G PP
Sbjct: 307 QA-PPAGQPQ--GPPRPPQGGRPSRPP 330
Score = 115 bits (287), Expect = 1e-25
Identities = 101/281 (35%), Positives = 107/281 (38%), Gaps = 50/281 (17%)
Query: 221 PSLPAGPPGVKRPPPPLMNGLPPRPPLPESLP--PPPPGGL----PLPPMPPTGPAPSG- 273
PSL AG P + P P P PP P P PPP GG P PP P GP P G
Sbjct: 29 PSLIAGNP---QGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 85
Query: 274 -------PPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPT 326
PPG PQ PPP G P P PP PP G + P G PP PP
Sbjct: 86 KSRSPRSPPGKPQGPPPQGGNQPQGP-PPPPGKPQGPPPQGGNRP-QGPPPPGKPQGPPP 143
Query: 327 SGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPG--VHPPPSAGVHPQAP------- 377
G +P P P PP G P P PP PG PPP G PQ P
Sbjct: 144 QGDKSRSPRSPPGKPQGPPPQGGNQPQGP---PPPPGKPQGPPPQGGKKPQGPPPPGKPQ 200
Query: 378 GVHP--------AAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQ--PPG 427
G P +P PQ P PP G PQ P P P P G PQ PP
Sbjct: 201 GPPPQGDKSRSSQSPPGKPQGP---PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 257
Query: 428 VHPSNPGVHPPTPMPPMLRPPLPSEGP----GNIP--PPPP 462
P P + PP +GP GN P PPPP
Sbjct: 258 GKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPP 298
Score = 42.4 bits (98), Expect = 0.001
Identities = 29/78 (37%), Positives = 29/78 (37%), Gaps = 16/78 (20%)
Query: 218 PAPPSLPAGPP---GVKRPPPPLMNGLPPRPPLPESL----PPPPPGGLPLPPMPPTGPA 270
P PP P GPP G K G P PP E PPPP GG P P P
Sbjct: 254 PPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 313
Query: 271 PSGP---------PGPPQ 279
P GP PPQ
Sbjct: 314 PQGPPRPPQGGRPSRPPQ 331
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 118 bits (296), Expect = 1e-26
Identities = 87/258 (33%), Positives = 96/258 (37%), Gaps = 22/258 (8%)
Query: 215 EKPPAPPSLPAGPP---GVKRPPPPLMNGLPPRPPLP---ESLPPPPPGGLPLPPMPPTG 268
++ P PP P G P G + PP G P PP +S PPP G P P G
Sbjct: 48 QRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGG 107
Query: 269 PAPSGPP---GPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPP 325
GPP G P+ PPP G P P PP G P P P PP
Sbjct: 108 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP 167
Query: 326 TSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH--PPPSAGVHPQAPGVHPAA 383
G P HP P PP G P PP PG PPP G Q P P
Sbjct: 168 QGGNQSQGPPPHPGKPEGPPPQGGNQSQGP---PPRPGKPEGPPPQGGNQSQGPPPRPGK 224
Query: 384 PAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPP 443
P P G P P HP P P G P P +P G P PG +P P+PP
Sbjct: 225 PEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQG--PPPPGGNPQQPLPP 282
Query: 444 MLRPPLPSEGPGNIPPPP 461
P+ P PPPP
Sbjct: 283 ------PAGKPQGPPPPP 294
Score = 114 bits (286), Expect = 1e-25
Identities = 91/251 (36%), Positives = 96/251 (38%), Gaps = 33/251 (13%)
Query: 220 PPSLPAGPPGVKRPPPPLMN---GLPPRPPLPESLPP---------PPPGGLPLPPMPPT 267
PP P P G PPP N G PPRP PE PP PP G P P P
Sbjct: 71 PPPRPGKPEG---PPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQG 127
Query: 268 GPAPSGPP---GPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHP 324
G GPP G P+ PPP G P P PP G P HP P P
Sbjct: 128 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPP 187
Query: 325 PTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH--PPPSAGVHPQAPGVHPA 382
P G P P P PP G P PP PG PP G PQ P HP
Sbjct: 188 PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP---PPRPGKPEGPPSQGGNKPQGPPPHPG 244
Query: 383 APAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMP 442
P Q P PP G PQ P +P G P PG +PQ P P+ PP P P
Sbjct: 245 KP----QGP---PPQEGNKPQRPPPPGRPQG--PPPPGGNPQQPLPPPAGKPQGPPPP-P 294
Query: 443 PMLRPPLPSEG 453
RP P +G
Sbjct: 295 QGGRPHRPPQG 305
Score = 107 bits (267), Expect = 2e-23
Identities = 91/266 (34%), Positives = 94/266 (35%), Gaps = 41/266 (15%)
Query: 221 PSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPP--PPPGGLPLPPMPPTGPAPSGPP--- 275
PS+ +G P +RP P R P P P PP GG PP P GPP
Sbjct: 29 PSVISGKPEGRRPQG---GNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQG 85
Query: 276 -GPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
Q PPP PG P PP G P PP PG P P PP G P
Sbjct: 86 GNQSQGPPPRPG----KPEGQPPQGGNQSQGP---PPRPG-KPEGP---PPQGGNQSQGP 134
Query: 335 GVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH--PPPSAGVHPQAPGVHPA---------- 382
P P PP G P PP PG PPP G Q P HP
Sbjct: 135 PPRPGKPEGPPPQGGNQSQGP---PPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGG 191
Query: 383 ----APAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPP 438
P P P PP G Q P P P PS G PQ P HP P PP
Sbjct: 192 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPP 251
Query: 439 TPMPPMLRPPLPSEGPGNIPPPPPTN 464
RPP P G PPPP N
Sbjct: 252 QEGNKPQRPPPPGRPQG--PPPPGGN 275
Score = 99.4 bits (246), Expect = 6e-21
Identities = 80/242 (33%), Positives = 83/242 (34%), Gaps = 37/242 (15%)
Query: 217 PPAPPSLPAGPP----GVKRPPPPL--------------MNGLPPRPPLPESLPP----- 253
PP P P GPP + PPP G PPRP PE PP
Sbjct: 71 PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 130
Query: 254 ----PPPGGLPLPPMPPTGPAPSGPP---GPPQLPPPAPGVHPPAPVVHPPASGVHPPAP 306
PP G P P P G GPP G P+ PPP G P HP PP
Sbjct: 131 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQG 190
Query: 307 GVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHP 366
G P P P PP G P P P P G P P HP P P
Sbjct: 191 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQ-GP 249
Query: 367 PPSAGVHPQAPGVHPAAPAVHPQAPGVHP----PAPGMHPQAPGVHPQPPGVHPSAPGVH 422
PP G PQ P P P PG +P P P PQ P PQ H G
Sbjct: 250 PPQEGNKPQRPP--PPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQP 307
Query: 423 PQ 424
PQ
Sbjct: 308 PQ 309
Score = 99.0 bits (245), Expect = 8e-21
Identities = 83/227 (36%), Positives = 84/227 (37%), Gaps = 34/227 (14%)
Query: 220 PPSLPAGPPGVKRPPPPLMN---GLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG 276
PP P P G PPP N G PPRP PE PPP GG PP P GPP
Sbjct: 113 PPPRPGKPEG---PPPQGGNQSQGPPPRPGKPEG--PPPQGGNQSQGPPPRPGKPEGPPP 167
Query: 277 PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGV 336
P HP P PP G P PP PG P P PP G P
Sbjct: 168 QGGNQSQGPPPHPGKPEGPPPQGGNQSQGP---PPRPG-KPEGP---PPQGGNQSQGPPP 220
Query: 337 HPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPP 396
P P P G P P HP P PPP G PQ P P PQ PP
Sbjct: 221 RPGKPEGPPSQGGNKPQGPPPHPGKP-QGPPPQEGNKPQRP-----PPPGRPQG----PP 270
Query: 397 APGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPP 443
PG +PQ P PP P P P P G P PP PP
Sbjct: 271 PPGGNPQQP---LPPPAGKPQGP--PPPPQGGRPH----RPPQGQPP 308
Score = 63.5 bits (153), Expect = 4e-10
Identities = 39/87 (44%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 216 KPPAPPSL----PAGPP---GVKRPPPPLMNGLPPRPP---LPESLPPPPPGGLPLPPMP 265
KP PPS P GPP G + PPP P RPP P+ PPPPGG P P+P
Sbjct: 224 KPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQG--PPPPGGNPQQPLP 281
Query: 266 PTGPAPSGPPGPPQ--LPPPAPGVHPP 290
P P GPP PPQ P P PP
Sbjct: 282 PPAGKPQGPPPPPQGGRPHRPPQGQPP 308
Score = 54.7 bits (130), Expect = 2e-07
Identities = 49/166 (29%), Positives = 51/166 (30%), Gaps = 7/166 (4%)
Query: 305 APGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGV 364
+P V P P G P + P P PP G P P P PP G
Sbjct: 28 SPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGN 87
Query: 365 H---PPPSAGV---HPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSA 418
PPP G P G P P P PP G Q P P P P
Sbjct: 88 QSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQ 147
Query: 419 PGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN 464
G Q P P P PP PP P G PPP N
Sbjct: 148 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPP-PHPGKPEGPPPQGGN 192
Score = 53.1 bits (126), Expect = 5e-07
Identities = 33/75 (44%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 213 KMEKPPAPPSLPAGPPGVK-----RPPPPLMNGLPPRPPLPESLPPPPPGGLPL-PPMPP 266
K + PP P P GPP + RPPPP PP P P PPP G P PP PP
Sbjct: 235 KPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPP 294
Query: 267 TGPAPSGPP--GPPQ 279
G P PP PPQ
Sbjct: 295 QGGRPHRPPQGQPPQ 309
Score = 30.8 bits (68), Expect = 2.7
Identities = 31/102 (30%), Positives = 34/102 (33%), Gaps = 17/102 (16%)
Query: 375 QAPGVHPAAP-AVHPQA---PGVHPPAPGM---HPQAPGVHPQPPGVHPSAPGVHPQPPG 427
++P V P PQ P PP PG P G Q P P P P G
Sbjct: 27 ESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGG 86
Query: 428 VHPSNPGVHPPTPMPPMLRPPL-------PSEGPGNIPPPPP 462
P PP P P +PP P PG PPP
Sbjct: 87 NQSQGP---PPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPP 125
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 117 bits (293), Expect = 2e-26
Identities = 94/266 (35%), Positives = 111/266 (41%), Gaps = 29/266 (10%)
Query: 219 APPSLPAGPPGVKRPP---------PPLMNGLPP-RPPLPESLPPPPPGGLPLPPMPPTG 268
APPSL P + PP PPL P P E+ P P P L PP P T
Sbjct: 519 APPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTT 578
Query: 269 PAPSGPPG---PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPP---APGVHPPAPGV 322
P P P PP PPA P + PP S + P P P P PP+P
Sbjct: 579 PPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPA 638
Query: 323 HPPTSGVHPPAPGVHPPAPGVH-PPAPGVHPPAPGVHPP-APGVHPP--PSAGVHPQAPG 378
PP S + P+P P A VH AP PP+P V P +P PP PSA QAP
Sbjct: 639 SPPLSPLATPSPQA-PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP 697
Query: 379 VHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPP 438
A P P +P P +P M P A PP + V P PP P +P PP
Sbjct: 698 SLAAPPLQVPPSP---PASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPP 754
Query: 439 TPMPPMLRPPLPSEGPGNIPPPPPTN 464
+PP+L P P +PP PP +
Sbjct: 755 PRVPPLLAAP-----PLQVPPSPPAS 775
Score = 111 bits (278), Expect = 1e-24
Identities = 99/304 (32%), Positives = 120/304 (39%), Gaps = 61/304 (20%)
Query: 211 HFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPP-LPESLPPPPPGGLPLPPM----- 264
H + PAP L A P + PPP + + PP P +L PP GLP PP+
Sbjct: 557 HLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLAT 616
Query: 265 -----------PPTGPAPSGPPGPPQLPPPAPGVHPP---------APVVHPPASGVHPP 304
PP PS P PP P P P AP PP+ V P
Sbjct: 617 PPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAP 676
Query: 305 -APGVHPP-APGVHPPA---PGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPP--APGV 357
+P PP +P PP+ P + P V P P P +P PP P PP AP +
Sbjct: 677 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP-PQAPPPLAAPPL 735
Query: 358 H-PPAPGVHPP--PSAGVHPQAP--------GVHPAAPAVHPQAPGVHPPAPGMHPQAPG 406
PP+P PP PSA P+ P V P+ PA P +P PP PQAP
Sbjct: 736 QVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPP-----PQAPP 790
Query: 407 VHPQPP-GVHPSAPGVHP-----QPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPP 460
PP PS P P P P +P PP PP+L PL +PP
Sbjct: 791 ALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL-----QVPPS 845
Query: 461 PPTN 464
PP +
Sbjct: 846 PPAS 849
Score = 98.2 bits (243), Expect = 1e-20
Identities = 96/269 (35%), Positives = 109/269 (40%), Gaps = 33/269 (12%)
Query: 217 PP--APPSLPAGPP--GVKRPPPPLMNGLPPRP-PLPESLPPPPPGGLPLPP--MPPTGP 269
PP APPS PA PP + P P N L P S PP PP P P PP P
Sbjct: 628 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 687
Query: 270 APSGPP-GPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPP--APGVH-PPAPGVHPP 325
+ + P PP L P V PP+P PP S P P PP AP + PP+P PP
Sbjct: 688 SATPPSQAPPSLAAPPLQV-PPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPP 746
Query: 326 TSGVHPPAPGVHP--PAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVH--P 381
S P P V P AP + P P P P +P PPP A P + P
Sbjct: 747 MSPSATPPPRVPPLLAAPPLQVP-----PSPPASLPMSPLAKPPPQAPPALATPPLQALP 801
Query: 382 AAPAVHP-QAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP 440
+ PA P QAP + M P A PP + V P PP PPTP
Sbjct: 802 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP 861
Query: 441 MP------PMLRPPLPSEGPGNIPPPPPT 463
P P L L PG PPPPP+
Sbjct: 862 GPDTSVSGPRLTLAL---APG--PPPPPS 885
Score = 94.7 bits (234), Expect = 2e-19
Identities = 97/300 (32%), Positives = 114/300 (38%), Gaps = 58/300 (19%)
Query: 215 EKPP--APPSLPAGPPGVKRPPP---PLMNGLPPRP-----PLPESLPPPPPGGLPLPPM 264
+ PP AP SLPA PP P PL + L P L P P L +PP+
Sbjct: 453 DSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPL 512
Query: 265 -------PP---TGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPG 314
PP T PA P LP AP PP P + H P P P
Sbjct: 513 ETQSSLAPPSLQTPPASLTTPPLENLPSLAP---PPLQTASAPLTTPHLETPPCPAPCPL 569
Query: 315 VHPPAPGVHPP---TSGVHPPAPGVHP----------PAPGVHPPA--PGVHPP----AP 355
PP+P PP S + P P P P+P + P A P PP P
Sbjct: 570 QAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPP 629
Query: 356 GVHPPAPGVHPP--PSAGVHPQAP---GVH----PAAPAVHP--QAPGVHPPAPGMHPQA 404
PP+P PP P A PQAP VH P +P P QAP P +P + P A
Sbjct: 630 LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA 689
Query: 405 PGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN 464
PP + V P PP P +P PP PP L P P +PP PP +
Sbjct: 690 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP-----PLQVPPSPPAS 744
Score = 88.2 bits (217), Expect = 1e-17
Identities = 95/315 (30%), Positives = 117/315 (37%), Gaps = 76/315 (24%)
Query: 217 PPAPPSLPAGPPGVKRPP----PPLMNGLPPRPPL-----PESLPPP---PPGGLP---L 261
P +PP P+ P + PP PPL +PP PP P + PPP PP P +
Sbjct: 680 PASPPVSPSATPPSQAPPSLAAPPLQ--VPPSPPASPPMSPSATPPPQAPPPLAAPPLQV 737
Query: 262 PPMPPTGP--APSGPPGPP----------QLPPPAPGVHPPAPVVHPPASGVHPPAPGV- 308
PP PP P +PS P P Q+PP P P +P+ PP PPA
Sbjct: 738 PPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQA--PPALATP 795
Query: 309 ------HPPA--PGVHPPAPGVHPPTSGVHPPAPGVHP--PAPGVH-PPAPGV------- 350
PPA PG P +P P S + P P P AP + PP+P
Sbjct: 796 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP 855
Query: 351 -HPPAPG----VHPP------APGVHPPPSAGVH-----PQAPGVHPAAPAVHPQAPGVH 394
PP PG V P APG PPPS P G +A + + G
Sbjct: 856 RRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 915
Query: 395 PPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPP------ 448
G +P + HP+A P PP PG P P PP P
Sbjct: 916 SGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGA--PLPWPPATGPGSADGLC 973
Query: 449 --LPSEGPGNIPPPP 461
+EGP + P P
Sbjct: 974 TIYETEGPESATPAP 988
Score = 73.9 bits (180), Expect = 3e-13
Identities = 89/285 (31%), Positives = 110/285 (38%), Gaps = 48/285 (16%)
Query: 217 PPAPPSLPAGPPGVK-RPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPP 275
P A PS P G K RP PP N P LP +LPP PP PLP P P+PS PP
Sbjct: 303 PLATPS----PSGTKARPVPPPDNAATP---LPATLPPSPPLATPLPLAP---PSPSAPP 352
Query: 276 GPPQLP-PPA--PGVHPPA----PVVHPPASGVHPPAPGVHP-PAPGVH-PPAP----GV 322
LP PPA P PP+ P+ PP+ PP H +P + PP+P +
Sbjct: 353 SLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSL 412
Query: 323 HPPTSGVHPPAPGVH---------PPAPGVHPPAPGVHPP------APGVHPPAPGVHPP 367
TS P H A P P PP AP P +P +
Sbjct: 413 QATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTS 472
Query: 368 PSAGVHPQAP--GVHP----AAPAVH-PQAPGVHPPAPGMHPQAPGVHP--QPPGVHPSA 418
S V P + +HP ++ A H PQAP P + Q+ P Q P +
Sbjct: 473 LSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTT 532
Query: 419 PGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPT 463
P + P P P P + PP P+ P PP P T
Sbjct: 533 PPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLT 577
Score = 66.6 bits (161), Expect = 4e-11
Identities = 91/333 (27%), Positives = 109/333 (32%), Gaps = 92/333 (27%)
Query: 219 APPSLPAGPPGVKRPPPPL---------MNGLPPRPPL------------PESLPPPPP- 256
AP L PPG RPPPP+ G R PL PES P P
Sbjct: 21 APGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPT 80
Query: 257 ------GGLPLPPMPPTG------PAPSGPPGPPQLPPPAPGVHPPAPVVHP--PASGVH 302
P P +G PA + PGP P A G P P+ S
Sbjct: 81 RSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEE 140
Query: 303 PPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPA-----------PGVHPPAPGVH 351
A G AP + G TSG P PG PA G+ PAP
Sbjct: 141 TVARGKATEAPKRSALSAGARRDTSG---PTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 197
Query: 352 PPAPGVHP--------------PAPGVHPPPSAGVHPQAPGVHPAAPAVHP-QAPGVHPP 396
P P P P+P PSAG Q P + + P +P P
Sbjct: 198 PRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGP 257
Query: 397 APGMHPQAPGVHP-----------QPPGVHP-------------SAPGVHPQPPG--VHP 430
+ P+AP HP +PP V P S+P P P G P
Sbjct: 258 SARGTPRAP-AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARP 316
Query: 431 SNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPT 463
P + TP+P L P P P + PP P+
Sbjct: 317 VPPPDNAATPLPATLPPSPPLATPLPLAPPSPS 349
Score = 62.4 bits (150), Expect = 8e-10
Identities = 81/283 (28%), Positives = 109/283 (38%), Gaps = 56/283 (19%)
Query: 216 KPPAPPSLPAGPPGVK--RPP---PPLMNGLPPRPPLPES-LPPPPPGGLPLPPMPPTGP 269
+ PA PS P P G++ RPP PP + P PL S L P P G P+PP
Sbjct: 264 RAPAHPSQPK-PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPP--- 319
Query: 270 APSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGV 329
P P PA PP+P + P + PP+P P + P+P PP+
Sbjct: 320 -----PDNAATPLPA--TLPPSPPLATPLP-LAPPSPSAPPSLQTL--PSPPATPPSQ-- 367
Query: 330 HPPAPGVHPPAPGVHPPAPGVHPPAPGVHP-PAPGVHPPPS----AGVHPQAPGVHPAAP 384
AP P PP+ PP H +P + PPS + + P
Sbjct: 368 ---APPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQ 424
Query: 385 AVH---------PQAPGVHPPAPGMHP------QAPGVHPQPPGVHPS-APGVHP--QPP 426
A H QA P P P QAP P P + S +P V P P
Sbjct: 425 ATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPL 484
Query: 427 GVHP----SNPGVH-PPTPMPPMLRPPLPSE---GPGNIPPPP 461
+HP S+ H P P+ ++ PPL ++ P ++ PP
Sbjct: 485 TIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPP 527
Score = 55.5 bits (132), Expect = 1e-07
Identities = 78/296 (26%), Positives = 92/296 (31%), Gaps = 61/296 (20%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGL----------------PPRPPLPESLPPPPPGGLPL 261
P P S P G RP P GL P R L G P
Sbjct: 111 PGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPG 170
Query: 262 PPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAP-------- 313
P P LP PAP P P P S P+P
Sbjct: 171 TPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA 230
Query: 314 --GVHPPA---------PGVHPPTSGVHPPAPGVHPPAPGVHPPAP------GVHPPAPG 356
G+ PA P P SG P A G P AP HP P + PP
Sbjct: 231 GGGLQRPASRSLSSSATPLSSPARSG--PSARGT-PRAP-AHPSQPKPKGLQALRPPQ-- 284
Query: 357 VHPP----APGVHPPPSAGVHPQAPGVHPAAPAVHPQ-----APGVHPPAPGMHPQAPGV 407
V PP AP + P S+ + +P A P P P PP+P + P
Sbjct: 285 VTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLA 344
Query: 408 HPQPPGVHPSAPGVHPQPPGVHPSNPG---VHPPTPMPPMLRPPLPSEGPGNIPPP 460
P P P + P PP PS PP PP L+ P + P ++ P
Sbjct: 345 PPSPSA--PPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSP 398
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 108 bits (270), Expect = 1e-23
Identities = 90/250 (36%), Positives = 101/250 (40%), Gaps = 37/250 (14%)
Query: 204 KQFFLQFHFKMEKPPAPPSLP----AGPPGVKRPPPPLMNG-----LPPRPPLPESLPPP 254
KQF QF + K + AGPPG G P P + P P
Sbjct: 161 KQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGP 220
Query: 255 PPGGLPLPPMPP--TGPAPS-GPPGPPQLP-PPAPGVHPPAPVVHPPASGVHPPAPGVHP 310
G P PP P T P P GPPGPP P PP PG P P+ PP G PP P + P
Sbjct: 221 AGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFP 280
Query: 311 PAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSA 370
P PP + P PG PP PG PP PG PP G PP PG PP
Sbjct: 281 GQPFGQPP----------LGPLPPGPPPPVPGYGPP-PGPPPPQQG-PPPPPGPFPP--- 325
Query: 371 GVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQ--PPGVHPSAPGVHPQPPGV 428
P P P A P PG P PG P AP V+P PP + P + P
Sbjct: 326 --RPPGPLGPPLTLAPPPHLPG---PPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGP-- 378
Query: 429 HPSNPGVHPP 438
P++P PP
Sbjct: 379 PPTDPYGRPP 388
Score = 81.3 bits (199), Expect = 2e-15
Identities = 55/135 (40%), Positives = 60/135 (44%), Gaps = 31/135 (22%)
Query: 215 EKPPAP---PSLPAG-------PPGVKRPPPPLMN-GLPPRPPLPESLPPPPPGGLPLPP 263
++PP P P P G PPG PPPP+ G PP PP P+ PPPPPG P
Sbjct: 271 DRPPPPVLFPGQPFGQPPLGPLPPG---PPPPVPGYGPPPGPPPPQQGPPPPPG-----P 322
Query: 264 MPPTGPAPSGPP----GPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPA 319
PP P P GPP PP LP P PG PPAP V+P PP P P
Sbjct: 323 FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP---AFFPPPTNSGMPTSDSRGP- 378
Query: 320 PGVHPPTSGVHPPAP 334
PPT P P
Sbjct: 379 ----PPTDPYGRPPP 389
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/77 (37%), Positives = 30/77 (38%), Gaps = 18/77 (23%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPL-----PESLPPPPPGGLPLPPM---PPTG 268
PP PP P GPP PPP L P PP P PPP G+P PPT
Sbjct: 324 PPRPPG-PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTD 382
Query: 269 P---------APSGPPG 276
P GPPG
Sbjct: 383 PYGRPPPYDRGDYGPPG 399
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 107 bits (268), Expect = 2e-23
Identities = 81/192 (42%), Positives = 96/192 (50%), Gaps = 33/192 (17%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNG--LPPRPPLPESLPPPPPGGLPL--PPMPPTGPAPS 272
PPAPP LP G G PPPP PP PP P PPP PGG+ + PP P G A S
Sbjct: 574 PPAPP-LP-GDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAIS 631
Query: 273 GPP---GPPQLPPPAP---GVHPPAPVVHPPASGVHPPAPGVHPPAPGVH--PPAPGVHP 324
PP G +PPP P GV P+P P + + PP PP PG PP P P
Sbjct: 632 PPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPP-----PPLPGSARIPPPPPPLP 686
Query: 325 PTSGVHPPAP------GVHPPAPGVHPPAPGVHPPAPGVHPPAPGV-HPPPSAGVHPQAP 377
++G+ PP P G+ PP P + P PG+ PP P P PG+ PPP G+ P P
Sbjct: 687 GSAGIPPPPPPLPGEAGMPPPPPPL-PGGPGIPPPPP--FPGGPGIPPPPPGMGMPPPPP 743
Query: 378 ---GVHPAAPAV 386
GV PAAP +
Sbjct: 744 FGFGV-PAAPVL 754
Score = 103 bits (256), Expect = 4e-22
Identities = 70/199 (35%), Positives = 92/199 (46%), Gaps = 35/199 (17%)
Query: 241 LPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAP---GVHPPAPVVHPP 297
+P R P+P + P P G +PP P G + + PP PP PPP P GV +P P
Sbjct: 567 VPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPG 626
Query: 298 ASGVHPPAP-----GVHPPAP---GVHPPAPGVHPPTSGVHPPAPGVHPPAPGVH--PPA 347
+ + PP P + PP P GV P+P P + + PP PP PG PP
Sbjct: 627 GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPP-----PPLPGSARIPPP 681
Query: 348 PGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGV 407
P P + G+ PP P + P AG+ P P + P PG+ PP P P PG+
Sbjct: 682 PPPLPGSAGIPPPPPPL--PGEAGMPPPPPPL--------PGGPGIPPPPP--FPGGPGI 729
Query: 408 HPQPPGVHPSAPGVHPQPP 426
P PPG+ G+ P PP
Sbjct: 730 PPPPPGM-----GMPPPPP 743
Score = 99.4 bits (246), Expect = 6e-21
Identities = 69/174 (39%), Positives = 84/174 (48%), Gaps = 40/174 (22%)
Query: 217 PPAPPSLPAG---------PPGVKRPPPPLMNG---LPPRPPLPESL----PPPPPGGLP 260
PP PP LP G P G PPP ++G +PP PPLPE + P PGG
Sbjct: 606 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTA 665
Query: 261 LPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAP 320
+PP PP + PP PP LP A G+ PP P + P +G+ PP PP PG P
Sbjct: 666 IPPPPPLPGSARIPPPPPPLPGSA-GIPPPPPPL-PGEAGMPPPP----PPLPG----GP 715
Query: 321 GVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHP 374
G+ PP PP PG PG+ PP PG+ G+ PP P P+A V P
Sbjct: 716 GIPPP-----PPFPG----GPGIPPPPPGM-----GMPPPPPFGFGVPAAPVLP 755
Score = 96.3 bits (238), Expect = 5e-20
Identities = 79/222 (35%), Positives = 95/222 (42%), Gaps = 49/222 (22%)
Query: 250 SLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVH 309
++PP P P+PP PP P SG PP PPAPG P PP P
Sbjct: 562 TVPPSVPSRAPVPPAPPL-PGDSGTIIPP---PPAPGDSTTPPP---------PPPP--- 605
Query: 310 PPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPG---VHPPAPGVHP 366
PP P PP PG GV +P P + PP PP G + PP P
Sbjct: 606 PPPP---PPLPG------GVCISSPPSLPGGTAISPP-----PPLSGDATIPPP-----P 646
Query: 367 PPSAGVHPQAPGVHPAAPAVHPQAP----GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVH 422
P GV +P P A+ P P PP P P + G+ P PP + P G+
Sbjct: 647 PLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL-PGEAGMP 705
Query: 423 PQPPGVHPSNPGVHPPTPMP--PMLRPPLPSEGPGNIPPPPP 462
P PP + P PG+ PP P P P + PP P G +PPPPP
Sbjct: 706 PPPPPL-PGGPGIPPPPPFPGGPGIPPPPPGMG---MPPPPP 743
Score = 36.2 bits (82), Expect = 0.065
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 217 PPAP--PSLPAGPPGVKRPPPPLM-NGLPPRPPLPESLPP 253
PP P P +P PPG+ PPPP G+P P LP L P
Sbjct: 721 PPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 760
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 107 bits (268), Expect = 2e-23
Identities = 81/192 (42%), Positives = 96/192 (50%), Gaps = 33/192 (17%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNG--LPPRPPLPESLPPPPPGGLPL--PPMPPTGPAPS 272
PPAPP LP G G PPPP PP PP P PPP PGG+ + PP P G A S
Sbjct: 583 PPAPP-LP-GDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAIS 640
Query: 273 GPP---GPPQLPPPAP---GVHPPAPVVHPPASGVHPPAPGVHPPAPGVH--PPAPGVHP 324
PP G +PPP P GV P+P P + + PP PP PG PP P P
Sbjct: 641 PPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPP-----PPLPGSARIPPPPPPLP 695
Query: 325 PTSGVHPPAP------GVHPPAPGVHPPAPGVHPPAPGVHPPAPGV-HPPPSAGVHPQAP 377
++G+ PP P G+ PP P + P PG+ PP P P PG+ PPP G+ P P
Sbjct: 696 GSAGIPPPPPPLPGEAGMPPPPPPL-PGGPGIPPPPP--FPGGPGIPPPPPGMGMPPPPP 752
Query: 378 ---GVHPAAPAV 386
GV PAAP +
Sbjct: 753 FGFGV-PAAPVL 763
Score = 103 bits (256), Expect = 4e-22
Identities = 70/199 (35%), Positives = 92/199 (46%), Gaps = 35/199 (17%)
Query: 241 LPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAP---GVHPPAPVVHPP 297
+P R P+P + P P G +PP P G + + PP PP PPP P GV +P P
Sbjct: 576 VPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPG 635
Query: 298 ASGVHPPAP-----GVHPPAP---GVHPPAPGVHPPTSGVHPPAPGVHPPAPGVH--PPA 347
+ + PP P + PP P GV P+P P + + PP PP PG PP
Sbjct: 636 GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPP-----PPLPGSARIPPP 690
Query: 348 PGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGV 407
P P + G+ PP P + P AG+ P P + P PG+ PP P P PG+
Sbjct: 691 PPPLPGSAGIPPPPPPL--PGEAGMPPPPPPL--------PGGPGIPPPPP--FPGGPGI 738
Query: 408 HPQPPGVHPSAPGVHPQPP 426
P PPG+ G+ P PP
Sbjct: 739 PPPPPGM-----GMPPPPP 752
Score = 99.4 bits (246), Expect = 6e-21
Identities = 69/174 (39%), Positives = 84/174 (48%), Gaps = 40/174 (22%)
Query: 217 PPAPPSLPAG---------PPGVKRPPPPLMNG---LPPRPPLPESL----PPPPPGGLP 260
PP PP LP G P G PPP ++G +PP PPLPE + P PGG
Sbjct: 615 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTA 674
Query: 261 LPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAP 320
+PP PP + PP PP LP A G+ PP P + P +G+ PP PP PG P
Sbjct: 675 IPPPPPLPGSARIPPPPPPLPGSA-GIPPPPPPL-PGEAGMPPPP----PPLPG----GP 724
Query: 321 GVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHP 374
G+ PP PP PG PG+ PP PG+ G+ PP P P+A V P
Sbjct: 725 GIPPP-----PPFPG----GPGIPPPPPGM-----GMPPPPPFGFGVPAAPVLP 764
Score = 96.3 bits (238), Expect = 5e-20
Identities = 79/222 (35%), Positives = 95/222 (42%), Gaps = 49/222 (22%)
Query: 250 SLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVH 309
++PP P P+PP PP P SG PP PPAPG P PP P
Sbjct: 571 TVPPSVPSRAPVPPAPPL-PGDSGTIIPP---PPAPGDSTTPPP---------PPPP--- 614
Query: 310 PPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPG---VHPPAPGVHP 366
PP P PP PG GV +P P + PP PP G + PP P
Sbjct: 615 PPPP---PPLPG------GVCISSPPSLPGGTAISPP-----PPLSGDATIPPP-----P 655
Query: 367 PPSAGVHPQAPGVHPAAPAVHPQAP----GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVH 422
P GV +P P A+ P P PP P P + G+ P PP + P G+
Sbjct: 656 PLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL-PGEAGMP 714
Query: 423 PQPPGVHPSNPGVHPPTPMP--PMLRPPLPSEGPGNIPPPPP 462
P PP + P PG+ PP P P P + PP P G +PPPPP
Sbjct: 715 PPPPPL-PGGPGIPPPPPFPGGPGIPPPPPGMG---MPPPPP 752
Score = 36.2 bits (82), Expect = 0.065
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 217 PPAP--PSLPAGPPGVKRPPPPLM-NGLPPRPPLPESLPP 253
PP P P +P PPG+ PPPP G+P P LP L P
Sbjct: 730 PPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 769
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 106 bits (264), Expect = 5e-23
Identities = 96/280 (34%), Positives = 117/280 (41%), Gaps = 60/280 (21%)
Query: 215 EKPPAPPSLPAGPPGVKR--------------PPPPLMNGLPP-RPPLPESLPPP---PP 256
++P P P+ P VKR PPPP + + PPLP + PPP PP
Sbjct: 318 QQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDRKPP 377
Query: 257 GGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGV- 315
L P GP + Q+PPPA PAPV PP PP P G+
Sbjct: 378 LAAALGEAEPPGPVDATDLPKVQIPPPAH----PAPVHQPPPLPHRPPPPPPSSYMTGMS 433
Query: 316 ----HPPAPGVHPPTSGVHPPAP--GVHPPAPGVHPPA-----PGVHPPAPGVHPPAPGV 364
+ G S + P G PPA G PPA P V+PP +PP P V
Sbjct: 434 TTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYG--PPAHLPYHPHVYPP----NPPPPPV 487
Query: 365 HPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQ 424
PPP A P PA+ P PG PP P +P P P+ P H P HP
Sbjct: 488 -PPPPASFPP---------PAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPP--HP- 534
Query: 425 PPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPP--PP 462
PPG+ P +PP +PP +PP+P IPPP PP
Sbjct: 535 PPGL-GLPPASYPPPAVPPGGQPPVPPP----IPPPGMPP 569
Score = 89.7 bits (221), Expect = 5e-18
Identities = 84/275 (30%), Positives = 102/275 (37%), Gaps = 39/275 (14%)
Query: 213 KMEKPPAPPSLPAGPPGVKRPP--PPLMNGLPPR---PPLPESLPPPPPGGLPLPPMPPT 267
K + P P PP ++ P P + P + P P+ P P P P
Sbjct: 262 KQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPK 321
Query: 268 GPAPSGPPGPPQLPPPAPGVHPPAP--VVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPP 325
P+P P P+ A V P PP + P HPP P HPP P PP
Sbjct: 322 KPSPQ--PSSPRQVKRAVVVSPKEENKAAEPPPPKI-PKIETTHPPLPPAHPP-PDRKPP 377
Query: 326 TSGV----HPPAPGVHPPAPGVHPPAPG----VHPPAPGVHPPAPGVHPPPSAGV----- 372
+ PP P P V P P VH P P H P P PPPS+ +
Sbjct: 378 LAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPP---PPPSSYMTGMST 434
Query: 373 ---HPQAPGVHPAAPAVHPQAP--GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPG 427
+ G + + P G PPA G P HP +P P V P P
Sbjct: 435 TSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLP-YHPHVYPPNPPPPPVPPPPAS 493
Query: 428 VHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
P P + PPTP P PP P+ P N PPPPP
Sbjct: 494 FPP--PAIPPPTPGYP---PPPPTYNP-NFPPPPP 522
Score = 87.4 bits (215), Expect = 2e-17
Identities = 71/205 (34%), Positives = 81/205 (39%), Gaps = 54/205 (26%)
Query: 216 KPPAPPSL----PAGP------PGVKRPPPPLMNGLPPRPPLPESLPPPPPG-------- 257
KPP +L P GP P V+ PPP + PPLP PPPPP
Sbjct: 375 KPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMST 434
Query: 258 --------------------GLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPP 297
G +PP P+ P P + PP P PP PV PP
Sbjct: 435 TSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPNP---PPPPVPPPP 491
Query: 298 AS----GVHPPAPGVHPPAPGVH---PPAPGVHPPTSGVHP-PAPGVHPPAPGVHPPA-- 347
AS + PP PG PP P + PP P PPT V P P PG+ P PPA
Sbjct: 492 ASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVP 551
Query: 348 PGVHPPAPGVHPPAPGVHPPPSAGV 372
PG PP P PP P PP G+
Sbjct: 552 PGGQPPVP---PPIPPPGMPPVGGL 573
Score = 50.4 bits (119), Expect = 3e-06
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 25/85 (29%)
Query: 217 PPA---PPSLPAGPPGVKRPPP-------------PLMNGLPPRPPL-----PESLPPP- 254
PPA PP++P PG PPP P + +PP PP P S PPP
Sbjct: 490 PPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPA 549
Query: 255 -PPGGLPL--PPMPPTGPAPSGPPG 276
PPGG P PP+PP G P G G
Sbjct: 550 VPPGGQPPVPPPIPPPGMPPVGGLG 574
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 104 bits (260), Expect = 1e-22
Identities = 75/203 (36%), Positives = 101/203 (49%), Gaps = 40/203 (19%)
Query: 274 PPGPPQLPPPAPGVHPP--APVVHPPASGVHPPA-PGVHPPAPGVHPPA-PGVHPPTSGV 329
PPG + PP +HPP +P +HP +HPP P +HP +HPP P +H
Sbjct: 15 PPGKICIHPP---LHPPTHSPSIHP---SIHPPTHPSIHP---SIHPPTHPSIH-----T 60
Query: 330 HPPA-PGVHPPAPGVHPPA-PGVHPPA-PGVHPPAPGVHPPPSAGVHPQA-PGVHPAA-P 384
HPP P HPP +HPP P +HP P +HP +HPP + +HP P H + P
Sbjct: 61 HPPIHPHTHPP---IHPPTHPSIHPLIHPSIHP---SLHPPTHSSIHPSTHPPTHSSIHP 114
Query: 385 AVHPQA-PGVHPPAPGMHPQA-PGVHPQPPGVHPSA-PGVHPQ--PPGVHPSNPGVHPPT 439
++HP P +HP +HP +HP P HPS P +HP PP P +P +HPPT
Sbjct: 115 SIHPSTHPLIHP---SIHPSTHSSIHP-PTHSHPSTHPLIHPSIHPPTHSPIHPSIHPPT 170
Query: 440 --PMPPMLRPPLPSEGPGNIPPP 460
P P + + +I PP
Sbjct: 171 HPPTHPSIHSSIHLPTHSSIHPP 193
Score = 103 bits (256), Expect = 4e-22
Identities = 75/220 (34%), Positives = 100/220 (45%), Gaps = 45/220 (20%)
Query: 255 PPGGLPL-PPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHP---PASGVHPPA-PGVH 309
PPG + + PP+ P +PS P PP P +HP +HP P+ HPP P H
Sbjct: 15 PPGKICIHPPLHPPTHSPSIHPSIH--PPTHPSIHPS---IHPPTHPSIHTHPPIHPHTH 69
Query: 310 PPAPGVHPPA-PGVHPPTSGVHPPA-PGVHPPA-----PGVHPPA-PGVHPPA-PGVHPP 360
PP +HPP P +HP +HP P +HPP P HPP +HP P HP
Sbjct: 70 PP---IHPPTHPSIHPL---IHPSIHPSLHPPTHSSIHPSTHPPTHSSIHPSIHPSTHPL 123
Query: 361 A-PGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAP 419
P +HP + +HP P +H P +HPP P P +H PP P+ P
Sbjct: 124 IHPSIHPSTHSSIHPPTHSHPSTHPLIH---PSIHPPTHS--PIHPSIH--PPTHPPTHP 176
Query: 420 GVH-----PQPPGVHPS-----NPGVHPPT--PMPPMLRP 447
+H P +HP +P +HPPT P+ P+ P
Sbjct: 177 SIHSSIHLPTHSSIHPPTHSFIHPSIHPPTHSPIHPLTHP 216
Score = 98.2 bits (243), Expect = 1e-20
Identities = 83/247 (33%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 245 PPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPA-PGVH---PPAPVVHPPASG 300
PP + PP P + P+ P+ P P + PP P +H P P HPP
Sbjct: 15 PPGKICIHPPLHPPTHSPSIHPSIHPPTHPSIHPSIHPPTHPSIHTHPPIHPHTHPP--- 71
Query: 301 VHPPA-PGVHP---PA--PGVHPPA-----PGVHPPT-SGVHPPA-PGVHPPA-PGVHPP 346
+HPP P +HP P+ P +HPP P HPPT S +HP P HP P +HP
Sbjct: 72 IHPPTHPSIHPLIHPSIHPSLHPPTHSSIHPSTHPPTHSSIHPSIHPSTHPLIHPSIHPS 131
Query: 347 A-PGVHPPA---PGVHPPA-PGVHPPPSAGVHPQA-PGVHPAA-PAVH-----PQAPGVH 394
+HPP P HP P +HPP + +HP P HP P++H P +H
Sbjct: 132 THSSIHPPTHSHPSTHPLIHPSIHPPTHSPIHPSIHPPTHPPTHPSIHSSIHLPTHSSIH 191
Query: 395 PPA-----PGMHPQAPG-VHP-QPPGVHP------SAPGV----------HPQPPGVHPS 431
PP P +HP +HP P +HP SA GV HP+P G
Sbjct: 192 PPTHSFIHPSIHPPTHSPIHPLTHPFIHPSDSSAASAGGVGPALQTRMSGHPRPTGSPVL 251
Query: 432 NPGVHPP 438
HPP
Sbjct: 252 ALASHPP 258
Score = 86.3 bits (212), Expect = 5e-17
Identities = 71/231 (30%), Positives = 94/231 (40%), Gaps = 49/231 (21%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPP------RPPLPESLPPPPPGGLPLPPMPPTGPA 270
PP PS+ PP PP+ P P + SL PP + PPT +
Sbjct: 52 PPTHPSIHTHPPIHPHTHPPIHPPTHPSIHPLIHPSIHPSLHPPTHSSIHPSTHPPTHSS 111
Query: 271 PSGPPGPPQLPPPAPGVHPPA-PVVHPPASGVHPPA-PGVHPPA---PGVHPPA-PGVHP 324
P +HP P++HP +HP +HPP P HP P +HP
Sbjct: 112 IH------------PSIHPSTHPLIHP---SIHPSTHSSIHPPTHSHPSTHPLIHPSIHP 156
Query: 325 PTSGVHPPAPGVHPPAPGVHPPA-PGVH-----PPAPGVHPPA-----PGVHPPPSAGVH 373
PT P P +HPP HPP P +H P +HPP P +HPP + +H
Sbjct: 157 PTHS--PIHPSIHPP---THPPTHPSIHSSIHLPTHSSIHPPTHSFIHPSIHPPTHSPIH 211
Query: 374 PQA-PGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP 423
P P +HP+ + A GV P + + G HP+P G A HP
Sbjct: 212 PLTHPFIHPSDSSA-ASAGGV---GPALQTRMSG-HPRPTGSPVLALASHP 257
Score = 39.7 bits (91), Expect = 0.006
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 18/74 (24%)
Query: 393 VHPPAPGMHP--QAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPL- 449
+HPP +HP +P +HP +HP P P +HPS +HPPT PP+
Sbjct: 21 IHPP---LHPPTHSPSIHPS---IHP------PTHPSIHPS---IHPPTHPSIHTHPPIH 65
Query: 450 PSEGPGNIPPPPPT 463
P P PP P+
Sbjct: 66 PHTHPPIHPPTHPS 79
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 104 bits (260), Expect = 1e-22
Identities = 92/244 (37%), Positives = 96/244 (39%), Gaps = 36/244 (14%)
Query: 224 PAGP-PGVKRPPPPLMNGLPPRPPLPESLPPP--PPGGLPLPPMPPTGPAPSGPPGPPQL 280
P GP PG P PP+ PP P + PPP PP P P PP P P PP
Sbjct: 46 PMGPGPGQSGPKPPIP---PPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPP-- 100
Query: 281 PPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHP-- 338
PPP P PA GV G PPA PPA PPTSG PP G P
Sbjct: 101 PPPQDSSKPVVAQGPGPAPGV-----GSAPPASSSAPPAT---PPTSGA-PPGSGPGPTP 151
Query: 339 -PAPGVHPPAPGVHPPAPGVHPPAPGV-HPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPP 396
P P V PG PP PP+ GV PP AG P P P Q PG P
Sbjct: 152 TPPPAVTSAPPGAPPPT----PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGP 207
Query: 397 APGMHPQAPGVHPQPPGVHP--SAPGVHPQPP---GVHPSNPGVHPPTPMPPMLRPPLPS 451
G P P PG P S PG HP+PP G P H P P P
Sbjct: 208 KGGKMPGGP-----KPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHP-PYHQQHHQGPPP 261
Query: 452 EGPG 455
GPG
Sbjct: 262 GGPG 265
Score = 78.6 bits (192), Expect = 1e-14
Identities = 81/221 (36%), Positives = 87/221 (39%), Gaps = 33/221 (14%)
Query: 254 PPPGGLPLPPMPPTGPAPSGPPGP-PQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPA 312
PPPG P GP P G GP P +PPP P P PP PP P
Sbjct: 34 PPPGMGLNQNRGPMGPGP-GQSGPKPPIPPPPPHQQQQQP---PPQQ---PP-----PQQ 81
Query: 313 PGVHPPAPGVHPPTSGVHPPAP-----GVHPPAPGVHPPAPGV--HPPAPGVHPPA--PG 363
P H P P P PP P V PG PAPGV PPA PPA P
Sbjct: 82 PPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPG---PAPGVGSAPPASSSAPPATPPT 138
Query: 364 VHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGM---HPQAPGVHPQPPGVHPSAPG 420
PP +G P P PA + P AP PP+ G+ PQA G P P V PG
Sbjct: 139 SGAPPGSGPGP-TPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPG 197
Query: 421 VHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPP 461
Q PG G P P P P L + PG P PP
Sbjct: 198 -PKQGPGPGGPKGGKMPGGPKPGG-GPGLST--PGGHPKPP 234
Score = 75.9 bits (185), Expect = 7e-14
Identities = 63/183 (34%), Positives = 68/183 (37%), Gaps = 29/183 (15%)
Query: 281 PPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPA 340
PPP G++ G P PG P P + PP P H P P P
Sbjct: 34 PPPGMGLNQNR--------GPMGPGPGQSGPKPPIPPPPP--HQQQQQPPPQQPPPQQPP 83
Query: 341 PGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGM 400
P PP P H PP P + G P APGV A PA AP PP G
Sbjct: 84 PHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGP-APGVGSAPPA-SSSAPPATPPTSGA 141
Query: 401 HP-QAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPP 459
P PG P PP SAP PG PPTP P P P + G PP
Sbjct: 142 PPGSGPGPTPTPPPAVTSAP-------------PGAPPPTP-PSSGVPTTPPQAGG--PP 185
Query: 460 PPP 462
PPP
Sbjct: 186 PPP 188
Score = 72.0 bits (175), Expect = 1e-12
Identities = 57/159 (35%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 310 PPAPGVH----PPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH 365
PP G++ P PG P SG PP P P PP P P H P P H
Sbjct: 35 PPGMGLNQNRGPMGPG--PGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPP--H 90
Query: 366 PPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQP 425
P P P P + P V Q PG PAPG+ P PP P++ P
Sbjct: 91 PQPHQQQQPPPPPQDSSKPVV-AQGPG---PAPGVGSAPPASSSAPPATPPTSGA----P 142
Query: 426 PGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN 464
PG S PG PTP PP P + S PG PP PP++
Sbjct: 143 PG---SGPG---PTPTPP---PAVTSAPPGAPPPTPPSS 172
Score = 60.8 bits (146), Expect = 2e-09
Identities = 44/118 (37%), Positives = 50/118 (42%), Gaps = 23/118 (19%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLP-PMPPTGPAPSGPP 275
P PP++ + PPG P PP +G+P PP PPPPP +P P P P GP P GP
Sbjct: 151 PTPPPAVTSAPPGAPPPTPP-SSGVPTTPPQAGG-PPPPPAAVPGPGPGPKQGPGPGGPK 208
Query: 276 GP-----------PQLPPPAPGVHPPAPVVHPPASGVHPPAPG--VHPPAPGVHPPAP 320
G P L PG HP PP G P G HPP H P
Sbjct: 209 GGKMPGGPKPGGGPGL--STPGGHP-----KPPHRGGGEPRGGRQHHPPYHQQHHQGP 259
Score = 45.1 bits (105), Expect = 1e-04
Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 19/107 (17%)
Query: 366 PPPSAGVH----PQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGV 421
PPP G++ P PG + P P + PP P Q P QPP P P
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPK-----PPIPPPPPHQQQQQPPPQ-QPP---PQQPPP 84
Query: 422 HPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIP----PPPPTN 464
H PP HP P P P P+ ++GPG P PP ++
Sbjct: 85 HQPPP--HPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASS 129
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 104 bits (259), Expect = 2e-22
Identities = 89/264 (33%), Positives = 110/264 (41%), Gaps = 33/264 (12%)
Query: 218 PAPP--SLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPP 275
PAPP LP+ PP + P L + P +S+ P P P P P P P
Sbjct: 853 PAPPVAGLPSAPPP-QFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFP 911
Query: 276 GPPQLPPPAPGVHP-----PAPVVHPPASGVHP--PAPGVHP---PAPGVHPP-APGVHP 324
PP P P P +P P P H +SG+ PAP + P P P HP A G P
Sbjct: 912 VPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQP 971
Query: 325 PTSGVHPPAPGVHPPAPGVHPPAPGVHPP-APGVHPPAPGVHPPPSAGVHPQA-PGVHPA 382
P P P HP P APG+ PP +P + P PGV P +H Q PG PA
Sbjct: 972 PQQ----PLPLQHPHL--FPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPG--PA 1023
Query: 383 APAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSN----PGVHPP 438
+ + + P+PG P P PP + AP P P P
Sbjct: 1024 QDPLPAHSGALPFPSPG-----PPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQS 1078
Query: 439 TPMPPMLRPPLPSEGPGNIPPPPP 462
TP P ++ P PS GPG +PP PP
Sbjct: 1079 TPSPHLVPSPAPSPGPGPVPPRPP 1102
Score = 85.5 bits (210), Expect = 9e-17
Identities = 84/265 (31%), Positives = 99/265 (37%), Gaps = 39/265 (14%)
Query: 218 PAPPSLPAGPP-----------GVKRPPPP---LMNGLPPRPPLPESLPPPPPGGLPLP- 262
P PP P PP G K+P P +G+P P P P P P P P
Sbjct: 905 PPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPS 964
Query: 263 ----PMPPTGPAPSGPPGPPQLPPPAPGVHPP-APVVHPPASGV--HPPAPGVHPPAPGV 315
P PP P P P PP APG+ PP +P + P GV PP P PG
Sbjct: 965 QAFGPQPPQQPLPL--QHPHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPG- 1021
Query: 316 HPPAPGVHPPTSGVHP-PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHP 374
PA P SG P P+PG PP P HPP + PAP P P P G P
Sbjct: 1022 --PAQDPLPAHSGALPFPSPG--PPQPP-HPPL--AYGPAPSTRPMGPQAAPLTIRG--P 1072
Query: 375 QAPGVHPAAPAVHPQ-APGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNP 433
+ G +P + P AP P PG P P PP + A +
Sbjct: 1073 SSAGQSTPSPHLVPSPAPS---PGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHG 1129
Query: 434 GVHPPTPMPPMLRPPLPSEGPGNIP 458
G P P+L+P G P
Sbjct: 1130 GTQSPGGGQPLLQPTKVDAAEGRRP 1154
Score = 75.9 bits (185), Expect = 7e-14
Identities = 89/300 (29%), Positives = 104/300 (34%), Gaps = 47/300 (15%)
Query: 204 KQFFLQFHFKMEKPPAP----PSLPAGPPGVK---RPPPPLMNGLPPRPPLPESLPPPPP 256
+Q L K + PP P P LP PP + LPP LP
Sbjct: 704 RQQLLDRELKKKPPPRPTAPKPLLPRREESEAVEAGDPPEELRSLPPDMVAGPRLPDTFL 763
Query: 257 GGLPLPPMPPTGPAPSGPPGPPQLPPP-APGVHP-PAPVVHPPASGVH--PPAPG-VHPP 311
G PP+ S PGP L P PG + P ++ P A G H P APG P
Sbjct: 764 GSATPLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPGPHAMPVAPGPALYP 823
Query: 312 APGVHPP---APGVHPPTSGVHPPAPGV--HPPAPGVHPPAP------------------ 348
AP P P P V P GV PP G+ P AP
Sbjct: 824 APAYTPELGLVPRSSPQHGVVSSPYVGVGPAPPVAGL-PSAPPPQFSGPELAMAVRPATT 882
Query: 349 ---GVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAP 405
+ P P P P P P P P P +P G P P H +
Sbjct: 883 TVDSIQAPIPSHTAPRPNPTPAPPPPCFPVPPPQPLPTPYTYP--AGAKQPIPAQHHFSS 940
Query: 406 GVHPQPPGVHPSAPGVHPQP-PGVHPSNP-GVHPPTPMPPMLRPPL-PSEGPGNIPPPPP 462
G+ P G G PQP P HPS G PP P+ P L P + PG +PP P
Sbjct: 941 GI---PAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSP 997
Score = 65.1 bits (157), Expect = 1e-10
Identities = 71/219 (32%), Positives = 85/219 (38%), Gaps = 43/219 (19%)
Query: 211 HFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
H + P AP LP P P P + G PP PPL L P P PLP P
Sbjct: 980 HPHLFPPQAPGLLPPQSP-YPYAPQPGVLGQPP-PPLHTQLYPGPAQD-PLPAHSGALPF 1036
Query: 271 PSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH 330
PS PGPPQ P HPP + + PAP P P P P ++G
Sbjct: 1037 PS--PGPPQPP-------------HPPLA--YGPAPSTRPMGPQA-APLTIRGPSSAGQS 1078
Query: 331 PPAPGVHP-PAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVH-- 387
P+P + P PAP P PG PP P P PPP A + ++P
Sbjct: 1079 TPSPHLVPSPAPS---PGPGPVPPRP------PAAEPPPCLRRGAAAADLLSSSPESQHG 1129
Query: 388 -PQAPGVHPP---------APGMHPQAPGVHPQPPGVHP 416
Q+PG P A G PQA + + P HP
Sbjct: 1130 GTQSPGGGQPLLQPTKVDAAEGRRPQALRLIERDPYEHP 1168
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/67 (43%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 214 MEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM----PPTGP 269
+E P A PA PPG+ PP LP P+P S PPP LP P PP
Sbjct: 1513 LESPVASLPGPAEPPGL----PPA--SLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPE 1566
Query: 270 AP-SGPP 275
AP SGPP
Sbjct: 1567 APSSGPP 1573
Score = 39.3 bits (90), Expect = 0.008
Identities = 29/72 (40%), Positives = 30/72 (41%), Gaps = 11/72 (15%)
Query: 216 KPPAPPSLP-AGPPGVKRPPPPLMNGLPPRPPLPESLP----PPPPGGLPLPPMPPTGPA 270
+PP P A PG PP GLPP LPES P PPP PLP P
Sbjct: 1508 RPPGGLESPVASLPGPAEPP-----GLPPAS-LPESTPIPSSSPPPLSSPLPEAPQPKEE 1561
Query: 271 PSGPPGPPQLPP 282
P P P PP
Sbjct: 1562 PPVPEAPSSGPP 1573
Score = 37.4 bits (85), Expect = 0.029
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 329 VHPPAPGVHPPAPGVHPPA--PGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAV 386
+ PP G+ P + PA PG+ P + P P PPP + P+AP P
Sbjct: 1507 IRPPG-GLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPV- 1564
Query: 387 HPQAPGVHPPAPGM 400
P+AP PP+ +
Sbjct: 1565 -PEAPSSGPPSSSL 1577
Score = 37.0 bits (84), Expect = 0.038
Identities = 28/77 (36%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 255 PPGGLPLPPMPPTGPA--PSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPA 312
PPGGL P GPA P PP P P PP P+ P P P PP
Sbjct: 1509 PPGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPP-PLSSPLPEA---PQPKEEPPV 1564
Query: 313 PGVHPPAPGVHPPTSGV 329
P AP PP+S +
Sbjct: 1565 ----PEAPSSGPPSSSL 1577
Score = 36.6 bits (83), Expect = 0.050
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 250 SLP-PPPPGGLPLPPMPPTGPAPSGPPGPPQLP---PPAPGVHPPAPVVHPPASGVHPPA 305
SLP P P GLP +P + P PS P P P P P PP P P+SG PP+
Sbjct: 1519 SLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP--EAPSSG--PPS 1574
Score = 32.7 bits (73), Expect = 0.72
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 301 VHPPAPGVHPPAPGVHPPA--PGVHPPTSGVHPPAPGVHPP---APGVHPPAPGVHPPAP 355
+ PP G+ P + PA PG+ P + P P PP +P P P PP
Sbjct: 1507 IRPPG-GLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPV- 1564
Query: 356 GVHPPAPGVHPPPSA 370
P AP PP S+
Sbjct: 1565 ---PEAPSSGPPSSS 1576
Score = 29.3 bits (64), Expect = 7.9
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 315 VHPPAPGVHPPTSGVHPPA--PGVHPPAPGVHPPAPGVHPP---APGVHPPAPGVHPPPS 369
+ PP G+ P + + PA PG+ P + P P PP +P P P PP
Sbjct: 1507 IRPPG-GLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPV- 1564
Query: 370 AGVHPQAPGVHPAAPAV 386
P+AP P + ++
Sbjct: 1565 ----PEAPSSGPPSSSL 1577
Score = 29.3 bits (64), Expect = 7.9
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 410 QPPGVHPSAPGVHP---QPPGVHPSNPGVHPPTPM--PPMLRPPLPSEGPGNIPPPPP 462
+PPG S P +PPG+ P++ P P PP L PLP PP P
Sbjct: 1508 RPPGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVP 1565
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 102 bits (255), Expect = 6e-22
Identities = 89/274 (32%), Positives = 106/274 (38%), Gaps = 39/274 (14%)
Query: 216 KPPAPPSLPAGP--PGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSG 273
KPP PP + + P + PP NG+ P PP P PPPP G + + P APS
Sbjct: 685 KPPTPPVMQSQSVKPQILVPP----NGVVPPPPPP---PPPPTPGSAMAQLKPAPCAPSL 737
Query: 274 P----PGPP----------QLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPG----V 315
P P PP Q+ PP P PP P PP + PP P V PAP V
Sbjct: 738 PQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQA---PPKPLVTIPAPTSTKTV 794
Query: 316 HPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQ 375
P PPT P P P + P PP P V P P + S P
Sbjct: 795 APVVTQAAPPTPTPPVPPAKKQPAFPASYIPPS---PPTPPVPVPPPTLPKQQSFCAKPP 851
Query: 376 APGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSN-PG 434
+ P V A PP ++ + P P V P +P P PS+ P
Sbjct: 852 PSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPV 911
Query: 435 VHPPTPMPP-----MLRPPLPSEGPGNIPPPPPT 463
P P PP + PP PS P PPPPPT
Sbjct: 912 PSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPT 945
Score = 88.2 bits (217), Expect = 1e-17
Identities = 79/255 (30%), Positives = 93/255 (36%), Gaps = 43/255 (16%)
Query: 236 PLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVH 295
P + +PP P P+ + P P PP+PP PP PP PPP P PP P
Sbjct: 601 PYTSLVPPLSPQPK-IVTPYTASQPSPPLPPP------PPPPPPPPPPPPPPPPPLPSQS 653
Query: 296 PPASGVHPP------------------APGVHPPAPGV---HPPAPGVHPPTSGVHPPAP 334
P++G P PP P V P + P +GV PP P
Sbjct: 654 APSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPP 713
Query: 335 GVHPPAPGVHPPAPGVHPPAPGVHPPAPGV----HPPPSAGVHPQAPGVHPAAPAVHPQA 390
PP P PP PG P AP + PPP +H Q + AP P
Sbjct: 714 ---PPPP---PPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIH-QVQHITQVAPPTPPPP 766
Query: 391 PGVHPPAPGMHPQAPGVH-PQPPGVHPSAPGV-HPQPPGVHPSNPGVHPPTPMPPMLRPP 448
P + P P P P V P P AP V PP P P P PP
Sbjct: 767 PPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPP 826
Query: 449 LPSEGPGNIPPPPPT 463
P P +P PPPT
Sbjct: 827 SPPTPP--VPVPPPT 839
Score = 86.7 bits (213), Expect = 4e-17
Identities = 87/292 (29%), Positives = 108/292 (36%), Gaps = 66/292 (22%)
Query: 211 HFKMEKPPAPPSLPAGPPGV--KRPPPPLMNGLPP------RPPLPESLPPPPPGGLP-- 260
H PP PP P P + + PP PL+ P P + ++ PP P +P
Sbjct: 754 HITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPA 813
Query: 261 ----------LPPMPPTGPAPSGPPGPPQ------LPPPAPGVHPPAPVVHPPASGVHPP 304
+PP PPT P P PP P+ PPP+P P P V + PP
Sbjct: 814 KKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSP--LSPVPSVVKQIASQFPP 871
Query: 305 APGVHPPAPGVHP--PAPGVHPPTSGVHPPAPGVHP---------PAPGVHPPAPG---V 350
P PPA P P P P S PPA P P+P PP P V
Sbjct: 872 PP--TPPAMESQPLKPVPANVAPQS---PPAVKAKPKWQPSSIPVPSPDFPPPPPESSLV 926
Query: 351 HPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQ 410
PP P PAP PPP+A P G P +PG P P PQ +
Sbjct: 927 FPPPPPSPVPAPPPPPPPTASPTPDKSG-SPGKKTSKTSSPGGKKPPP--TPQ------R 977
Query: 411 PPGVHPSAPGVHPQP--PGVH--------PSNPGVHPPTPMPPMLRPPLPSE 452
+ S+ HP+P P V P+ G +PP PP P +
Sbjct: 978 NSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGK 1029
Score = 53.5 bits (127), Expect = 4e-07
Identities = 74/292 (25%), Positives = 88/292 (30%), Gaps = 99/292 (33%)
Query: 217 PPAPPSL-------------PAGPPGVKRPPPPLMNGLPPR-----PPLPES---LPPPP 255
PP PP++ P PP VK P + +P PP PES PPPP
Sbjct: 872 PPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPP 931
Query: 256 PGGLPLPPMPP---TGPAP--SGPPGPP---------QLPPPAPGVH------------- 288
P +P PP PP P P SG PG + PPP P +
Sbjct: 932 PSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPE 991
Query: 289 PPAPVVHPPASGVHPPAPGVHPPAPGVHPPA---------------PGV----------- 322
P P V S PPA P + PPA PGV
Sbjct: 992 PKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNLPGVLQQGCVSAKAP 1051
Query: 323 ---------------HPPTSGVHPPAPGVHPPAPGVHPPA--PGVHPPAPGVHPPAP--- 362
P S PP P P P + PA G P V P P
Sbjct: 1052 VLSGRGKDSVVEFPSPPSDSDFPPPPPETELPLPPIEIPAVFSGNTSPKVAVVNPQPQQW 1111
Query: 363 -----GVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHP 409
PPP+ + + A + P V P P + V P
Sbjct: 1112 SKMSVKKAPPPTRPKRNDSTRLTQAEISEQPTMATVVPQVPTSPKSSLSVQP 1163
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 100 bits (249), Expect = 3e-21
Identities = 97/308 (31%), Positives = 113/308 (36%), Gaps = 71/308 (23%)
Query: 218 PAPPSLPAGPPGVKRP-PPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPT----GPA-- 270
PAP S P G P + P P P +PP+ S P P P P+P T PA
Sbjct: 195 PAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA-PTAPVPHTHIQQAPALH 253
Query: 271 PSGPPGPPQLPPPAPGVHPP------------APV-VHPPASGVHPPAPGVHPPAPGVHP 317
P PP P PPP P HPP AP PP G PP P P +
Sbjct: 254 PQRPPSPH--PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQH 311
Query: 318 PAP----GVHPPTS------GVHPPAPGVH----------------PPAPGVHPPAPGVH 351
P P G+ P S G P A H PP PPAP
Sbjct: 312 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAM 371
Query: 352 P--------PAPGVHPPAPGVHPPPSAGVHPQAPGVH-PAAPAVHP-------QAPGVHP 395
P P P + P HPP +G P + + P PA+ P P HP
Sbjct: 372 PHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHP 431
Query: 396 PAPGMHPQA---PGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSE 452
P + PQ+ P QPPG+ S P PP HP G+H P PP + P
Sbjct: 432 PPLQLMPQSQPLPSSPAQPPGLTQSQN--LPPPPASHPPT-GLHQVAPQPPFAQHPFVPG 488
Query: 453 GPGNIPPP 460
GP I PP
Sbjct: 489 GPPPITPP 496
Score = 95.9 bits (237), Expect = 7e-20
Identities = 93/280 (33%), Positives = 106/280 (37%), Gaps = 52/280 (18%)
Query: 215 EKPPAPPSLPAGPPGVKRPPPPL--MNGLPPRPPLPESLPPPPPG-GLPLPPMPPTGP-- 269
++PP+P PP P PPL + G +P P PP G G P P GP
Sbjct: 255 QRPPSPH-----PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL 309
Query: 270 APSGPPGPPQLPPPAP------GVHPPAPVVHP----PAS-----GVHPPAPGVHPPAPG 314
GPP P LPP A G P A H PAS PP PPAP
Sbjct: 310 QHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP- 368
Query: 315 VHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAP----GVHPPAPGVHPPPSA 370
P + PP P P PAP H P + P+P PP P + P S
Sbjct: 369 --LAMPHIKPP-----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 421
Query: 371 GVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVH-----PQPPGVHPSAPGVH--- 422
H P HP + PQ+ P P Q PG+ P PP HP G+H
Sbjct: 422 STH-HPPSAHPPPLQLMPQS----QPLPSSPAQPPGLTQSQNLPPPPASHPPT-GLHQVA 475
Query: 423 PQPP-GVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPP 461
PQPP HP PG PP P P GPG PP
Sbjct: 476 PQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPP 515
Score = 82.0 bits (201), Expect = 1e-15
Identities = 78/251 (31%), Positives = 93/251 (37%), Gaps = 38/251 (15%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG 276
P LPA ++ PP LPP P + PPP P+P + PAP
Sbjct: 340 PHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPT--TPIPQL----PAPQAHKH 393
Query: 277 PPQLPPPAP----GVHPPAPVVHPPAS-GVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
PP L P+P PP P + P +S H P P HPP + P + + P+S P
Sbjct: 394 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHP-PSAHPPPLQLMPQSQPL--PSSPAQP 450
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
P PP P HPP G+H AP PP A HP PG P P P P
Sbjct: 451 PGLTQSQNL----PPPPASHPPT-GLHQVAP---QPPFA-QHPFVPGGPP--PITPPTCP 499
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS 451
P P PG QPP +A G G P P + L
Sbjct: 500 STSTP-----PAGPGTSAQPPCSGAAASG--------GSIAGGSSCPLPTVQIKEEALDD 546
Query: 452 EGPGNIPPPPP 462
PPPPP
Sbjct: 547 AEEPESPPPPP 557
Score = 67.4 bits (163), Expect = 3e-11
Identities = 67/232 (28%), Positives = 86/232 (37%), Gaps = 34/232 (14%)
Query: 209 QFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTG 268
Q + ++PP LP P + P PP P+P+ P P PP +G
Sbjct: 350 QSALQSQQPPREQPLPPAPLAMPHIKP------PPTTPIPQL---PAPQAHKHPP-HLSG 399
Query: 269 PAPSG-----PPGPPQLPPPAPGVHPPAPVVHPPASGVHP---PAPGVHPPAPGVH---- 316
P+P PP P P + H P P HPP + P P P PG+
Sbjct: 400 PSPFSMNANLPPPPALKPLSSLSTHHP-PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQN 458
Query: 317 -PPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQ 375
PP P HPPT G+H AP P HP PG PP P P PP+
Sbjct: 459 LPPPPASHPPT-GLHQVAP---QPPFAQHPFVPGGPPPI--TPPTCPSTSTPPAGPGTSA 512
Query: 376 APGVHPAAPAVHPQAPGVHPPAPGMHPQAPGV----HPQPPGVHPSAPGVHP 423
P AA + A G P P + + + P+ P P +P P
Sbjct: 513 QPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEP 564
Score = 40.0 bits (92), Expect = 0.004
Identities = 51/188 (27%), Positives = 65/188 (34%), Gaps = 35/188 (18%)
Query: 306 PGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPA---PGVHP--------PA 354
PG P + P P +P A + PP G HP A PG++P
Sbjct: 771 PGFEVKPPELDPLHPAANPMEHFARHSALTI-PPTAGPHPFASFHPGLNPLERERLALAG 829
Query: 355 PGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPG---------MHPQAP 405
P + P + +H + + P Q V P +H Q P
Sbjct: 830 PQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDP 889
Query: 406 ----GVHPQPPGVHPSAPGVH----PQPPGVHPSNPGVHPPTPMPPMLRPPL-----PSE 452
P P V P G H P PPG P NP + P MLR P+ P +
Sbjct: 890 LHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLP-NPLLGQPPHEHEMLRHPVFGTPYPRD 948
Query: 453 GPGNIPPP 460
PG IPPP
Sbjct: 949 LPGAIPPP 956
Score = 37.0 bits (84), Expect = 0.038
Identities = 38/131 (29%), Positives = 48/131 (36%), Gaps = 56/131 (42%)
Query: 221 PSLPAGPPGVKR----PPPPL------MNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
PS PA PPG+ + PPPP ++ + P+PP + P PGG P P PPT P+
Sbjct: 444 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPP-PITPPTCPS 500
Query: 271 PSGPP-GP-----------------------------------------PQLPPPAP-GV 287
S PP GP P+ PPP P
Sbjct: 501 TSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 560
Query: 288 HPPAPVVHPPA 298
P VV P+
Sbjct: 561 SPEPTVVDTPS 571
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 100 bits (249), Expect = 3e-21
Identities = 97/308 (31%), Positives = 113/308 (36%), Gaps = 71/308 (23%)
Query: 218 PAPPSLPAGPPGVKRP-PPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPT----GPA-- 270
PAP S P G P + P P P +PP+ S P P P P+P T PA
Sbjct: 749 PAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA-PTAPVPHTHIQQAPALH 807
Query: 271 PSGPPGPPQLPPPAPGVHPP------------APV-VHPPASGVHPPAPGVHPPAPGVHP 317
P PP P PPP P HPP AP PP G PP P P +
Sbjct: 808 PQRPPSPH--PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQH 865
Query: 318 PAP----GVHPPTS------GVHPPAPGVH----------------PPAPGVHPPAPGVH 351
P P G+ P S G P A H PP PPAP
Sbjct: 866 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAM 925
Query: 352 P--------PAPGVHPPAPGVHPPPSAGVHPQAPGVH-PAAPAVHP-------QAPGVHP 395
P P P + P HPP +G P + + P PA+ P P HP
Sbjct: 926 PHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHP 985
Query: 396 PAPGMHPQA---PGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSE 452
P + PQ+ P QPPG+ S P PP HP G+H P PP + P
Sbjct: 986 PPLQLMPQSQPLPSSPAQPPGLTQSQN--LPPPPASHPPT-GLHQVAPQPPFAQHPFVPG 1042
Query: 453 GPGNIPPP 460
GP I PP
Sbjct: 1043 GPPPITPP 1050
Score = 95.9 bits (237), Expect = 7e-20
Identities = 93/280 (33%), Positives = 106/280 (37%), Gaps = 52/280 (18%)
Query: 215 EKPPAPPSLPAGPPGVKRPPPPL--MNGLPPRPPLPESLPPPPPG-GLPLPPMPPTGP-- 269
++PP+P PP P PPL + G +P P PP G G P P GP
Sbjct: 809 QRPPSPH-----PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL 863
Query: 270 APSGPPGPPQLPPPAP------GVHPPAPVVHP----PAS-----GVHPPAPGVHPPAPG 314
GPP P LPP A G P A H PAS PP PPAP
Sbjct: 864 QHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP- 922
Query: 315 VHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAP----GVHPPAPGVHPPPSA 370
P + PP P P PAP H P + P+P PP P + P S
Sbjct: 923 --LAMPHIKPP-----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 975
Query: 371 GVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVH-----PQPPGVHPSAPGVH--- 422
H P HP + PQ+ P P Q PG+ P PP HP G+H
Sbjct: 976 STH-HPPSAHPPPLQLMPQS----QPLPSSPAQPPGLTQSQNLPPPPASHPPT-GLHQVA 1029
Query: 423 PQPP-GVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPP 461
PQPP HP PG PP P P GPG PP
Sbjct: 1030 PQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPP 1069
Score = 82.0 bits (201), Expect = 1e-15
Identities = 78/251 (31%), Positives = 93/251 (37%), Gaps = 38/251 (15%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG 276
P LPA ++ PP LPP P + PPP P+P + PAP
Sbjct: 894 PHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPT--TPIPQL----PAPQAHKH 947
Query: 277 PPQLPPPAP----GVHPPAPVVHPPAS-GVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
PP L P+P PP P + P +S H P P HPP + P + + P+S P
Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHP-PSAHPPPLQLMPQSQPL--PSSPAQP 1004
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
P PP P HPP G+H AP PP A HP PG P P P P
Sbjct: 1005 PGLTQSQNL----PPPPASHPPT-GLHQVAP---QPPFA-QHPFVPGGPP--PITPPTCP 1053
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS 451
P P PG QPP +A G G P P + L
Sbjct: 1054 STSTP-----PAGPGTSAQPPCSGAAASG--------GSIAGGSSCPLPTVQIKEEALDD 1100
Query: 452 EGPGNIPPPPP 462
PPPPP
Sbjct: 1101 AEEPESPPPPP 1111
Score = 67.4 bits (163), Expect = 3e-11
Identities = 67/232 (28%), Positives = 86/232 (37%), Gaps = 34/232 (14%)
Query: 209 QFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTG 268
Q + ++PP LP P + P PP P+P+ P P PP +G
Sbjct: 904 QSALQSQQPPREQPLPPAPLAMPHIKP------PPTTPIPQL---PAPQAHKHPP-HLSG 953
Query: 269 PAPSG-----PPGPPQLPPPAPGVHPPAPVVHPPASGVHP---PAPGVHPPAPGVH---- 316
P+P PP P P + H P P HPP + P P P PG+
Sbjct: 954 PSPFSMNANLPPPPALKPLSSLSTHHP-PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQN 1012
Query: 317 -PPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQ 375
PP P HPPT G+H AP P HP PG PP P P PP+
Sbjct: 1013 LPPPPASHPPT-GLHQVAP---QPPFAQHPFVPGGPPPI--TPPTCPSTSTPPAGPGTSA 1066
Query: 376 APGVHPAAPAVHPQAPGVHPPAPGMHPQAPGV----HPQPPGVHPSAPGVHP 423
P AA + A G P P + + + P+ P P +P P
Sbjct: 1067 QPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEP 1118
Score = 40.0 bits (92), Expect = 0.004
Identities = 51/188 (27%), Positives = 65/188 (34%), Gaps = 35/188 (18%)
Query: 306 PGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPA---PGVHP--------PA 354
PG P + P P +P A + PP G HP A PG++P
Sbjct: 1325 PGFEVKPPELDPLHPAANPMEHFARHSALTI-PPTAGPHPFASFHPGLNPLERERLALAG 1383
Query: 355 PGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPG---------MHPQAP 405
P + P + +H + + P Q V P +H Q P
Sbjct: 1384 PQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDP 1443
Query: 406 ----GVHPQPPGVHPSAPGVH----PQPPGVHPSNPGVHPPTPMPPMLRPPL-----PSE 452
P P V P G H P PPG P NP + P MLR P+ P +
Sbjct: 1444 LHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLP-NPLLGQPPHEHEMLRHPVFGTPYPRD 1502
Query: 453 GPGNIPPP 460
PG IPPP
Sbjct: 1503 LPGAIPPP 1510
Score = 37.0 bits (84), Expect = 0.038
Identities = 38/131 (29%), Positives = 48/131 (36%), Gaps = 56/131 (42%)
Query: 221 PSLPAGPPGVKR----PPPPL------MNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
PS PA PPG+ + PPPP ++ + P+PP + P PGG P P PPT P+
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPP-PITPPTCPS 1054
Query: 271 PSGPP-GP-----------------------------------------PQLPPPAP-GV 287
S PP GP P+ PPP P
Sbjct: 1055 TSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 1114
Query: 288 HPPAPVVHPPA 298
P VV P+
Sbjct: 1115 SPEPTVVDTPS 1125
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 100 bits (249), Expect = 3e-21
Identities = 97/308 (31%), Positives = 113/308 (36%), Gaps = 71/308 (23%)
Query: 218 PAPPSLPAGPPGVKRP-PPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPT----GPA-- 270
PAP S P G P + P P P +PP+ S P P P P+P T PA
Sbjct: 749 PAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA-PTAPVPHTHIQQAPALH 807
Query: 271 PSGPPGPPQLPPPAPGVHPP------------APV-VHPPASGVHPPAPGVHPPAPGVHP 317
P PP P PPP P HPP AP PP G PP P P +
Sbjct: 808 PQRPPSPH--PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQH 865
Query: 318 PAP----GVHPPTS------GVHPPAPGVH----------------PPAPGVHPPAPGVH 351
P P G+ P S G P A H PP PPAP
Sbjct: 866 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAM 925
Query: 352 P--------PAPGVHPPAPGVHPPPSAGVHPQAPGVH-PAAPAVHP-------QAPGVHP 395
P P P + P HPP +G P + + P PA+ P P HP
Sbjct: 926 PHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHP 985
Query: 396 PAPGMHPQA---PGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSE 452
P + PQ+ P QPPG+ S P PP HP G+H P PP + P
Sbjct: 986 PPLQLMPQSQPLPSSPAQPPGLTQSQN--LPPPPASHPPT-GLHQVAPQPPFAQHPFVPG 1042
Query: 453 GPGNIPPP 460
GP I PP
Sbjct: 1043 GPPPITPP 1050
Score = 95.9 bits (237), Expect = 7e-20
Identities = 93/280 (33%), Positives = 106/280 (37%), Gaps = 52/280 (18%)
Query: 215 EKPPAPPSLPAGPPGVKRPPPPL--MNGLPPRPPLPESLPPPPPG-GLPLPPMPPTGP-- 269
++PP+P PP P PPL + G +P P PP G G P P GP
Sbjct: 809 QRPPSPH-----PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL 863
Query: 270 APSGPPGPPQLPPPAP------GVHPPAPVVHP----PAS-----GVHPPAPGVHPPAPG 314
GPP P LPP A G P A H PAS PP PPAP
Sbjct: 864 QHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP- 922
Query: 315 VHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAP----GVHPPAPGVHPPPSA 370
P + PP P P PAP H P + P+P PP P + P S
Sbjct: 923 --LAMPHIKPP-----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 975
Query: 371 GVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVH-----PQPPGVHPSAPGVH--- 422
H P HP + PQ+ P P Q PG+ P PP HP G+H
Sbjct: 976 STH-HPPSAHPPPLQLMPQS----QPLPSSPAQPPGLTQSQNLPPPPASHPPT-GLHQVA 1029
Query: 423 PQPP-GVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPP 461
PQPP HP PG PP P P GPG PP
Sbjct: 1030 PQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPP 1069
Score = 82.0 bits (201), Expect = 1e-15
Identities = 78/251 (31%), Positives = 93/251 (37%), Gaps = 38/251 (15%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG 276
P LPA ++ PP LPP P + PPP P+P + PAP
Sbjct: 894 PHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPT--TPIPQL----PAPQAHKH 947
Query: 277 PPQLPPPAP----GVHPPAPVVHPPAS-GVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
PP L P+P PP P + P +S H P P HPP + P + + P+S P
Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHP-PSAHPPPLQLMPQSQPL--PSSPAQP 1004
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
P PP P HPP G+H AP PP A HP PG P P P P
Sbjct: 1005 PGLTQSQNL----PPPPASHPPT-GLHQVAP---QPPFA-QHPFVPGGPP--PITPPTCP 1053
Query: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS 451
P P PG QPP +A G G P P + L
Sbjct: 1054 STSTP-----PAGPGTSAQPPCSGAAASG--------GSIAGGSSCPLPTVQIKEEALDD 1100
Query: 452 EGPGNIPPPPP 462
PPPPP
Sbjct: 1101 AEEPESPPPPP 1111
Score = 67.4 bits (163), Expect = 3e-11
Identities = 67/232 (28%), Positives = 86/232 (37%), Gaps = 34/232 (14%)
Query: 209 QFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTG 268
Q + ++PP LP P + P PP P+P+ P P PP +G
Sbjct: 904 QSALQSQQPPREQPLPPAPLAMPHIKP------PPTTPIPQL---PAPQAHKHPP-HLSG 953
Query: 269 PAPSG-----PPGPPQLPPPAPGVHPPAPVVHPPASGVHP---PAPGVHPPAPGVH---- 316
P+P PP P P + H P P HPP + P P P PG+
Sbjct: 954 PSPFSMNANLPPPPALKPLSSLSTHHP-PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQN 1012
Query: 317 -PPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQ 375
PP P HPPT G+H AP P HP PG PP P P PP+
Sbjct: 1013 LPPPPASHPPT-GLHQVAP---QPPFAQHPFVPGGPPPI--TPPTCPSTSTPPAGPGTSA 1066
Query: 376 APGVHPAAPAVHPQAPGVHPPAPGMHPQAPGV----HPQPPGVHPSAPGVHP 423
P AA + A G P P + + + P+ P P +P P
Sbjct: 1067 QPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEP 1118
Score = 40.0 bits (92), Expect = 0.004
Identities = 51/188 (27%), Positives = 65/188 (34%), Gaps = 35/188 (18%)
Query: 306 PGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPA---PGVHP--------PA 354
PG P + P P +P A + PP G HP A PG++P
Sbjct: 1325 PGFEVKPPELDPLHPAANPMEHFARHSALTI-PPTAGPHPFASFHPGLNPLERERLALAG 1383
Query: 355 PGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPG---------MHPQAP 405
P + P + +H + + P Q V P +H Q P
Sbjct: 1384 PQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDP 1443
Query: 406 ----GVHPQPPGVHPSAPGVH----PQPPGVHPSNPGVHPPTPMPPMLRPPL-----PSE 452
P P V P G H P PPG P NP + P MLR P+ P +
Sbjct: 1444 LHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLP-NPLLGQPPHEHEMLRHPVFGTPYPRD 1502
Query: 453 GPGNIPPP 460
PG IPPP
Sbjct: 1503 LPGAIPPP 1510
Score = 37.0 bits (84), Expect = 0.038
Identities = 38/131 (29%), Positives = 48/131 (36%), Gaps = 56/131 (42%)
Query: 221 PSLPAGPPGVKR----PPPPL------MNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
PS PA PPG+ + PPPP ++ + P+PP + P PGG P P PPT P+
Sbjct: 998 PSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPP-PITPPTCPS 1054
Query: 271 PSGPP-GP-----------------------------------------PQLPPPAP-GV 287
S PP GP P+ PPP P
Sbjct: 1055 TSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 1114
Query: 288 HPPAPVVHPPA 298
P VV P+
Sbjct: 1115 SPEPTVVDTPS 1125
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 100 bits (249), Expect = 3e-21
Identities = 74/207 (35%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 235 PPLMNGLPPRPPLPESLPPPPPGGLPL-PPMPPTGPAPSGPPGPPQL--PPPAPGVHPPA 291
PP PP P P PPP P PL PP PPTG P PPG P PP PG+ P
Sbjct: 398 PPSQIQAPPMPGPPPLGPPPAP---PLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPL 454
Query: 292 PVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVH 351
P + PP P PG PP P PP PG+ PP P P P + PPAP
Sbjct: 455 PRLLPPG-----PPPG-RPPGPPPGPP-PGL--------PPGPPPRGPPPRLPPPAP--- 496
Query: 352 PPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQP 411
PG+ PP PG+ P P P + PA P + P AP P PG+ P + +P
Sbjct: 497 ---PGIPPPRPGMMRP------PLVPPLGPAPPGLFPPAP---LPNPGVLSAPPNLIQRP 544
Query: 412 PGVHPSAPGVHPQPPGVHPSNPGVHPP 438
SA + + + P + P
Sbjct: 545 KADDTSAATIEKKATATISAKPQITNP 571
Score = 100 bits (248), Expect = 4e-21
Identities = 72/173 (41%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 213 KMEKPP--APPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
+ + PP PPS PP PPPL G PP PPL PP PP GLP P PP P
Sbjct: 389 QQQAPPQSVPPSQIQAPP--MPGPPPL--GPPPAPPLR---PPGPPTGLP-PGPPPGAPP 440
Query: 271 PSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH 330
PPG P L P P + PP P PP PP P PP PG+ P P PP
Sbjct: 441 FLRPPGMPGLRGPLPRLLPPGP---PPG---RPPGPPPGPP-PGLPPGPPPRGPPPRLPP 493
Query: 331 PPAPGVHPPAPGVHPP--APGVHPPAPGVHPPAPGVHP-----PPSAGVHPQA 376
P PG+ PP PG+ P P + P PG+ PPAP +P PP+ P+A
Sbjct: 494 PAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPPNLIQRPKA 546
Score = 93.6 bits (231), Expect = 3e-19
Identities = 68/171 (39%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 267 TGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAP--GVHPPAPGVHP 324
T A S PPQ PP+ PP P PP G PPAP + PP P G+ P P P
Sbjct: 383 TSTASSQQQAPPQSVPPSQIQAPPMP--GPPPLG-PPPAPPLRPPGPPTGLPPGPPPGAP 439
Query: 325 PTSGVHPPA-PGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAA 383
P + PP PG+ P P + PP P PP PP P PPP P G P
Sbjct: 440 PF--LRPPGMPGLRGPLPRLLPPGP---PPG---RPPGPPPGPPPGLPPGPPPRGPPPRL 491
Query: 384 PAVHPQAPGVHPPAPGM--HPQAPGVHPQPPGVHPSA----PGVHPQPPGV 428
P P PG+ PP PGM P P + P PPG+ P A PGV PP +
Sbjct: 492 PP--PAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPPNL 540
Score = 83.6 bits (205), Expect = 4e-16
Identities = 63/170 (37%), Positives = 71/170 (41%), Gaps = 23/170 (13%)
Query: 298 ASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGV 357
AS P PP+ PP PG PP G PPAP + PP P P PG P AP
Sbjct: 386 ASSQQQAPPQSVPPSQIQAPPMPG--PPPLGP-PPAPPLRPPGPPTGLP-PGPPPGAP-- 439
Query: 358 HPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPS 417
P + PP G+ P + P P P P PP P PG+ P PP P
Sbjct: 440 ----PFLRPPGMPGLRGPLPRLLPPGPP--PGRPPGPPPGP-----PPGLPPGPPPRGPP 488
Query: 418 APGVHPQPPGVHPSNPG------VHPPTPMPPMLRPPLPSEGPGNIPPPP 461
P PPG+ P PG V P P PP L PP P PG + PP
Sbjct: 489 PRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPP 538
Score = 70.1 bits (170), Expect = 4e-12
Identities = 51/139 (36%), Positives = 58/139 (41%), Gaps = 32/139 (23%)
Query: 324 PPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAA 383
PP+ PP PG P P PPAP + PP P P PG PPP A + PG+
Sbjct: 398 PPSQIQAPPMPGPPPLGP---PPAPPLRPPGPPTGLP-PG--PPPGAPPFLRPPGM---- 447
Query: 384 PAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPP 443
PG+ P P + P P PPG +PPG P P PP P P
Sbjct: 448 -------PGLRGPLPRLLPPGP-----PPG----------RPPGPPPGPPPGLPPGPPPR 485
Query: 444 MLRPPLPSEGPGNIPPPPP 462
P LP P IPPP P
Sbjct: 486 GPPPRLPPPAPPGIPPPRP 504
Score = 34.3 bits (77), Expect = 0.25
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 211 HFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
H ++E P P +P P + PL PP S PP + + P+ G
Sbjct: 133 HVEVESIPLP-DMPHAPSNILIQDIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHG-V 190
Query: 271 PSGPPG-PPQLPPPAPGVHPPAPVV 294
P PPG P PPP P PP VV
Sbjct: 191 PRLPPGRKPPGPPPGP---PPPQVV 212
Score = 30.0 bits (66), Expect = 4.6
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 311 PAPGVHPPAPGVHPPTSGVHPPAPGVHPP---APGVHPPAPGVHPPAPGVHPPAPGV 364
P PG PP+ + TS PP V GV PG PP P PP P V
Sbjct: 157 PLPGAQPPS--ILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPGPPPGPPPPQV 211
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 100 bits (248), Expect = 4e-21
Identities = 97/302 (32%), Positives = 112/302 (37%), Gaps = 71/302 (23%)
Query: 221 PSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQL 280
P+ PA P PPP LM+ RPP S P P M GP G GP
Sbjct: 346 PAAPANNP----PPPSLMSTTQSRPPWMNS---GPSESRPYHGMHGGGPGGPGG-GPHSF 397
Query: 281 PPPAP---GVHPPAPVVH----PPASGVHPPAPGVH--PPAPGVHPPAP-----GVHPPT 326
P P P G H P+ H PP + PP P ++ P PG H P P G P
Sbjct: 398 PHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVG 457
Query: 327 SGVH----------PPAPGVHPPAPGVHPPAPGVHPPAP-GVHPP------APGVHPPPS 369
SGV+ PP G+ PP P PP G PP P G PP P PPPS
Sbjct: 458 SGVYRLHQGKGMMPPPPMGMMPPPP---PPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPS 514
Query: 370 AGVHPQAP--------------GVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVH 415
+ + P G P QA P P + P PPGV
Sbjct: 515 SSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQ 574
Query: 416 PS-APGVHPQPPGVHPSNPGV--HPPTPMPPMLRPP------------LPSEGPGNIPPP 460
P PG P PP P + G+ PP P PP + P +P G PPP
Sbjct: 575 PPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPP 634
Query: 461 PP 462
PP
Sbjct: 635 PP 636
Score = 82.0 bits (201), Expect = 1e-15
Identities = 71/216 (32%), Positives = 84/216 (38%), Gaps = 36/216 (16%)
Query: 214 MEKPPAPPSLPAGPPGVKRPPP--------PLMNGLPPRPPLPESLPPPPPGGLPLPPMP 265
M+ PP P + PPG PPP P+ +G+ +PPPP G +P PP P
Sbjct: 425 MQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPP 484
Query: 266 PTGPAPSGPPGP-------PQLPPPAP------GVHPPAPVVHPPASGVHPPAPGVHPP- 311
P+G P P GP Q PPP P P P + G PP
Sbjct: 485 PSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPW 544
Query: 312 -----APGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPG----VHPPAP 362
A P AP + + V P PGV PP P PP P PP PG ++ P P
Sbjct: 545 QQQQAAAAASPGAPQMQGNPTMV-PLPPGVQPPLPPGAPPPPP--PPPPGSAGMMYAPPP 601
Query: 363 GVHPP--PSAGVHPQAPGVHPAAPAVHPQAPGVHPP 396
PP PS V GV P P AP PP
Sbjct: 602 PPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPP 637
Score = 75.1 bits (183), Expect = 1e-13
Identities = 66/205 (32%), Positives = 77/205 (37%), Gaps = 36/205 (17%)
Query: 279 QLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHP 338
+ P PA P P AS P AP +PP P + T+ PP
Sbjct: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSL--------MSTTQSRPPWMN--- 370
Query: 339 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVH----PQAPGVH 394
P P G+H PG P P P P G H P H P P +
Sbjct: 371 SGPSESRPYHGMHGGGPGGPGGGPHSFPHPL----PSLTGGHGGHPMQHNPNGPPPPWMQ 426
Query: 395 PPAPGMH--PQAPGVHPQPP-----GVHPSAPGVH--PQPPGVHPSNP-GVHPPTPMPPM 444
PP P M+ P PG H PP G P GV+ Q G+ P P G+ PP P PP
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPS 486
Query: 445 LRPPLPSEGP-------GNIPPPPP 462
+PP P GP PPPPP
Sbjct: 487 GQPPPPPSGPLPPWQQQQQQPPPPP 511
Score = 50.4 bits (119), Expect = 3e-06
Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 15/73 (20%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPG----------GLPLPPMPP 266
P P LP G P PPPP G+ PP PPPPP G+ + MPP
Sbjct: 571 PGVQPPLPPGAPPPPPPPPPGSAGMMYAPP-----PPPPPPMDPSNFVTMMGMGVAGMPP 625
Query: 267 TGPAPSGPPGPPQ 279
G P+ PP PPQ
Sbjct: 626 FGMPPAPPPPPPQ 638
Score = 49.7 bits (117), Expect = 6e-06
Identities = 39/126 (30%), Positives = 50/126 (39%), Gaps = 26/126 (20%)
Query: 363 GVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGM----HPQAPGVHPQPP------ 412
G P P++ P P A A P AP +PP P + + P ++ P
Sbjct: 321 GEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
Query: 413 GVHPSAPG---------VHPQP--PGVHPSNPGVHPPT-PMPPMLRPPLPSEGPGNIPP- 459
G+H PG HP P G H +P H P P PP ++PP P G PP
Sbjct: 381 GMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPG 440
Query: 460 ---PPP 462
PPP
Sbjct: 441 HHGPPP 446
>gi|239753972 PREDICTED: hypothetical protein [Homo sapiens]
Length = 298
Score = 99.4 bits (246), Expect = 6e-21
Identities = 81/242 (33%), Positives = 109/242 (45%), Gaps = 46/242 (19%)
Query: 230 VKRPPPPLMNGLPPRPPLPES--LPPPPPGGLPLPPM--PPTGPAPSGPPGPPQLPPPAP 285
+ +P P ++ PP+ S LP P LP+ P PP P+ + P P PP P
Sbjct: 44 LNQPTHPTIHPSSTHPPIHPSTHLPIHPSTHLPIHPSTHPPIHPSTNPPIHPSTNPPIHP 103
Query: 286 GVHPPA-PVVHPPAS--GVHPPA-----PGVHPPAP-GVHPPA--PGVHPPT-SGVHPPA 333
HP P HPP++ +HP A P +HP +HPP +HPPT S +H P
Sbjct: 104 STHPTIHPSTHPPSTYLPIHPSAHPLIHPFIHPLTHLFIHPPPTHSPIHPPTHSSIHLPT 163
Query: 334 P-GVHPPA-PGVHPPA---PGVHPPAPGVHPPA-PGVHPPPSAGVHPQA-PGVHPAA-PA 385
++PP P +HPP P +HPP +HP P +HP HP P HP + P+
Sbjct: 164 HLSIYPPTYPSIHPPPTPHPSIHPP---IHPSTHPLIHPSTHTSTHPPTHPPTHPPSNPS 220
Query: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNP-GVHPPTPMPPM 444
+H +HPP +HP P P HP P HPS HPP P +
Sbjct: 221 IH---SSIHPP---IHP------PTHPSTHP------PIHSSTHPSTYFSTHPPLLSPKV 262
Query: 445 LR 446
L+
Sbjct: 263 LQ 264
Score = 86.7 bits (213), Expect = 4e-17
Identities = 74/202 (36%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 289 PPAPVVHPPASGVHPPA-PGVHPPA-PGVHPPA-PGVHPPTSGVHPPA-PGVHPPA-PGV 343
P P +HP S HPP P H P P H P P HPP +HP P +HP P +
Sbjct: 47 PTHPTIHP--SSTHPPIHPSTHLPIHPSTHLPIHPSTHPP---IHPSTNPPIHPSTNPPI 101
Query: 344 HPPA-----PGVHPPAP--GVHPPA-----PGVHPPPSAGVHPQAPGVHPAAPAVH---- 387
HP P HPP+ +HP A P +HP +HP P P P H
Sbjct: 102 HPSTHPTIHPSTHPPSTYLPIHPSAHPLIHPFIHPLTHLFIHPP-PTHSPIHPPTHSSIH 160
Query: 388 -PQAPGVHPPAPGMHPQAPGVHPQPPGVHPSA-PGVHPQP-PGVHPS-NPGVHPPTPMPP 443
P ++PP P +HP PP HPS P +HP P +HPS + HPPT PP
Sbjct: 161 LPTHLSIYPPT------YPSIHP-PPTPHPSIHPPIHPSTHPLIHPSTHTSTHPPTH-PP 212
Query: 444 MLRPPLPSEGPGNIPP-PPPTN 464
P PS PP PPT+
Sbjct: 213 THPPSNPSIHSSIHPPIHPPTH 234
Score = 45.4 bits (106), Expect = 1e-04
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 27/125 (21%)
Query: 211 HFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
H + P P P + PP P + PP P L + P T
Sbjct: 156 HSSIHLPTHLSIYPPTYPSIHPPPTPHPSIHPPIHPSTHPL---------IHPSTHTSTH 206
Query: 271 PSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPA-PGVHPPA-PGVHPPT-S 327
P P PP PP P +H S +HPP +HPP P HPP HP T
Sbjct: 207 P--PTHPPTHPPSNPSIH----------SSIHPP---IHPPTHPSTHPPIHSSTHPSTYF 251
Query: 328 GVHPP 332
HPP
Sbjct: 252 STHPP 256
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 99.0 bits (245), Expect = 8e-21
Identities = 76/264 (28%), Positives = 89/264 (33%), Gaps = 26/264 (9%)
Query: 218 PAPP-SLPAGPPGVKRPPPPLMNGLPPRP---PLPESLPPPPPGGLPLPP-----MPPTG 268
P+PP + PP P PP+ P P P P + P PP P PP PP
Sbjct: 1438 PSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPT 1497
Query: 269 PAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVH----P 324
PS P P PP + PP PP + P P P P P P P
Sbjct: 1498 TTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1557
Query: 325 PTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAP 384
PT+ PP P P P P P+P P PPP+ P P
Sbjct: 1558 PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSP---PTITTTTPPPTTTPSPPTTTTTTPPP 1614
Query: 385 AVHPQAPGVHP--PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMP 442
P P P P P P PP + P PP PS P P+P
Sbjct: 1615 TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP-----PPTTTPSPPTTTTPSPPI 1669
Query: 443 PMLRPPLPSEGPGN---IPPPPPT 463
P P+ P + P PPT
Sbjct: 1670 TTTTTPPPTTTPSSPITTTPSPPT 1693
Score = 94.0 bits (232), Expect = 3e-19
Identities = 79/269 (29%), Positives = 88/269 (32%), Gaps = 32/269 (11%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPP------PPPGGLPLPPMPPTGPA 270
P P + PP P PP+ P PP PP PPP P PP P
Sbjct: 1422 PSPPTTTTTTPPPTTTPSPPITTTTTP-PPTTTPSPPISTTTTPPPTTTPSPPTTTPSP- 1479
Query: 271 PSGPPGPP----QLPPPAPGVHPP--APVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHP 324
P+ P PP PPP PP P+ P ++ PP PP P P
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTP-----P 1534
Query: 325 PTSGVHPP--APGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPA 382
PT+ PP P P + PP PP P P P P P P +
Sbjct: 1535 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTT 1594
Query: 383 APAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAP--GVHPQPPGVHPSNP---GVHP 437
P P PP P P PP P P PP PS P P
Sbjct: 1595 TP---PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 1651
Query: 438 P---TPMPPMLRPPLPSEGPGNIPPPPPT 463
P TP PP P P PPP T
Sbjct: 1652 PPTTTPSPPTTTTPSPPITTTTTPPPTTT 1680
Score = 87.8 bits (216), Expect = 2e-17
Identities = 83/280 (29%), Positives = 93/280 (33%), Gaps = 55/280 (19%)
Query: 214 MEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPP---------PPPGGLPLPPM 264
M+K PS P P PPP LPP + P PPP P PP+
Sbjct: 1392 MDKCITTPSPPTTTPS---PPPTSTTTLPP------TTTPSPPTTTTTTPPPTTTPSPPI 1442
Query: 265 -PPTGPAPSGPPGPP----QLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPA 319
T P P+ P PP PPP PP PP + PP P P P
Sbjct: 1443 TTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSP 1502
Query: 320 PGVH-----------PPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH----PPAPGV 364
P PPT+ PP P P P P P P PP
Sbjct: 1503 PTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP 1562
Query: 365 HPPPSAGVHPQAPGVHPAAP-AVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP 423
PPP+ P P P+ P P P + P P P PP + P
Sbjct: 1563 SPPPTTTTTP-PPTTTPSPPTTTTPSPPTITTTTP-----PPTTTPSPPTTTTTTP---- 1612
Query: 424 QPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPT 463
PP PS P P T PP LP P P PPPT
Sbjct: 1613 -PPTTTPSPPTTTPIT--PPTSTTTLP---PTTTPSPPPT 1646
Score = 84.7 bits (208), Expect = 2e-16
Identities = 79/313 (25%), Positives = 95/313 (30%), Gaps = 70/313 (22%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPP-----RPPLPESLPPP------PPGGLPLPPM-- 264
P+PP+ PP PP PP PP + PP PP P PP
Sbjct: 1470 PSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTT 1529
Query: 265 ---PPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPG 321
PP PS P P PP + PP PP + P P P P P+P
Sbjct: 1530 TTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPP 1589
Query: 322 V-----HPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH----PPAPGVHPPPSAGV 372
PPT+ PP P P P P P P PP PPP+
Sbjct: 1590 TITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTT 1649
Query: 373 HPQAPGVHPAAPAVHPQAPGV--------------------HPPAPGMHPQAPGVHPQPP 412
P P P+ P +P + PP M +P P P
Sbjct: 1650 TPP-PTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSP 1708
Query: 413 GVHPSAPG--VHPQPPGVHPSNPGV----HPPT------------------PMPPMLRPP 448
+ P P PP + P PPT P+PP + PP
Sbjct: 1709 ITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPP 1768
Query: 449 LPSEGPGNIPPPP 461
S P P
Sbjct: 1769 TFSPFSTTTPTTP 1781
Score = 77.0 bits (188), Expect = 3e-14
Identities = 63/214 (29%), Positives = 68/214 (31%), Gaps = 16/214 (7%)
Query: 263 PMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGV 322
PM PS P P PP + PP PP + P P P P P
Sbjct: 1391 PMDKCITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTP-- 1448
Query: 323 HPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAP---GVHPPPSAGVHP--QAP 377
PPT+ PP P P P P P P P P PPP+ P P
Sbjct: 1449 -PPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTP 1507
Query: 378 GVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAP--GVHPQPPGVHPSNP-- 433
PA+ P PP P P PP P P PP PS P
Sbjct: 1508 ITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 1567
Query: 434 -GVHPP---TPMPPMLRPPLPSEGPGNIPPPPPT 463
PP TP PP P P PPP T
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTT 1601
Score = 62.4 bits (150), Expect = 8e-10
Identities = 49/185 (26%), Positives = 65/185 (35%), Gaps = 23/185 (12%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG 276
P P + PP P PP P PP + PP P PP T P P+ P
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTT--PITPPTSTTTLPPTTTPSP-PPTTTTTPPPTTTPS 1658
Query: 277 PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGV 336
PP P+ PP + P P P +P P+ PPT+ + P+P
Sbjct: 1659 PPTTTTPS-----------PPITTTTTPPPTTTPSSPITTTPS----PPTTTMTTPSPTT 1703
Query: 337 HPPAPGVHPPAPG----VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAP-AVHPQAP 391
P +P P PP + P+P P P P ++P P P
Sbjct: 1704 TPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPP 1763
Query: 392 GVHPP 396
+ PP
Sbjct: 1764 SITPP 1768
Score = 46.6 bits (109), Expect = 5e-05
Identities = 40/152 (26%), Positives = 51/152 (33%), Gaps = 42/152 (27%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPP----RPPLPESLPPPPPGGLPLPPM-----PPT 267
P P + P PP PP PP P P + P PP P PP+ PP
Sbjct: 1618 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP 1677
Query: 268 GPAPSGP----PGPPQ--LPPPAPGVHPPAPVV-----------HPPASGVHPPAPGVHP 310
PS P P PP + P+P P +P+ PP + + P+P P
Sbjct: 1678 TTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTP 1737
Query: 311 PAPGVH----------------PPAPGVHPPT 326
P P P + PPT
Sbjct: 1738 SPPTTTMTTLPPTTTSSPLTTTPLPPSITPPT 1769
Score = 32.7 bits (73), Expect = 0.72
Identities = 40/162 (24%), Positives = 48/162 (29%), Gaps = 23/162 (14%)
Query: 234 PPPLMNGLPPRPPLPESL---PPPPPGGLPLPPMPPTG--------PAPSGPPGPPQLPP 282
P P P P+ + P P P G P P P P+G P P
Sbjct: 4119 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 4178
Query: 283 PAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGV---HPPAPGVHPPTS-GVHPPAP---- 334
P P P + PP P + +PP P TS P
Sbjct: 4179 TTTTTVTPTPT--PTGTQTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTT 4236
Query: 335 --GVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHP 374
PPA + AP P AP + PPPS P
Sbjct: 4237 LLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSP 4278
Score = 31.2 bits (69), Expect = 2.1
Identities = 32/128 (25%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLP--------PPPPGGLPLPPMPPTGP 269
P P GPP P+ PP S P P L +PP
Sbjct: 4188 PTPTGTQTGPP-THTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPAIE 4246
Query: 270 APS-GPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVH--PPAPGVHPPT 326
S PP P P G H +P PP++ PP G P V T
Sbjct: 4247 MTSTAPPSTPTAPTTTSGGHTLSP---PPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTT 4303
Query: 327 SGVHPPAP 334
+ P P
Sbjct: 4304 TSAWTPTP 4311
Score = 31.2 bits (69), Expect = 2.1
Identities = 44/204 (21%), Positives = 58/204 (28%), Gaps = 46/204 (22%)
Query: 217 PPAPPSLPAGPPGVKRP---PPPLMNGLPPRPPLPESLPPPPP-------GGLPLPPMPP 266
PP S P P L++ LPP + + PP P GG L P P
Sbjct: 4214 PPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPS 4273
Query: 267 TGPAPSGPP------GPPQLPPPAPGVHPPAPVVHPPASGVHPPA----PGVHPPAPGV- 315
T +P G P G P P+ P + + P+ G+ P V
Sbjct: 4274 TTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLSTPSIIRTTGLRPYPSSVL 4333
Query: 316 ---------HPPAPGVHPPTSG----------------VHPPAPGVHPPAPGVHPPAPGV 350
+ P V+ T G + P P P P
Sbjct: 4334 ICCVLNDTYYAPGEEVYNGTYGDTCYFVNCSLSCTLEFYNWSCPSTPSPTPTPSKSTPTP 4393
Query: 351 HPPAPGVHPPAPGVHPPPSAGVHP 374
P+ P PG PP P
Sbjct: 4394 SKPSSTPSKPTPGTKPPECPDFDP 4417
Score = 30.4 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGLPP---RPPLPESLPPPPPGGLPLPP--MPPT-GPAP 271
P+ + P+ PP P P PP LP + P PLPP PPT P
Sbjct: 1715 PSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFS 1774
Query: 272 SGPPGPPQLP 281
+ P P +P
Sbjct: 1775 TTTPTTPCVP 1784
Score = 30.4 bits (67), Expect = 3.6
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 278 PQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPP-APGVHPP 318
P P P P P P+S P PG PP P PP
Sbjct: 4377 PSTPSPTPTPSKSTPTPSKPSSTPSKPTPGTKPPECPDFDPP 4418
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 99.0 bits (245), Expect = 8e-21
Identities = 97/303 (32%), Positives = 115/303 (37%), Gaps = 62/303 (20%)
Query: 216 KPPAPPS----LPAGPPGVKR-PPPPLMNGLPPRPP----LPESLPPPPPGG-LPLPPMP 265
KP +PPS P PG + PP P N +PP P P+S+PPP P P+ P
Sbjct: 139 KPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSP 198
Query: 266 P---TGPAPSGP--PGPPQLPPPAPGVHPPA---------PVVHPPASGVHPPAPGVHPP 311
+ P P GP P P PPP PG A P+ PP P
Sbjct: 199 HNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSR 258
Query: 312 APGVHPPAPGVHPPTSG----VH------PPAPGVHPPAPGVHPPAPGVHPPAPGVHPPA 361
A PP P PP G +H PP PP P P+ P P P
Sbjct: 259 ALDDKPPPP---PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSR 315
Query: 362 PGVHP-PPSAGVHPQAPGV--------HPAAPAVHPQAPGVHPPAPGMHPQAP------- 405
PG P PPS+ + + P + P P G PP P P P
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGR 375
Query: 406 -GVHPQPPGV--HPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGP--GNIPPP 460
G P PP V + S P P + PS GV P P RPPLP + P G PPP
Sbjct: 376 SGPLPPPPPVSRNGSTSRALPATPQL-PSRSGVDSPRSGP---RPPLPPDRPSAGAPPPP 431
Query: 461 PPT 463
PP+
Sbjct: 432 PPS 434
Score = 91.3 bits (225), Expect = 2e-18
Identities = 87/286 (30%), Positives = 100/286 (34%), Gaps = 66/286 (23%)
Query: 220 PPSLPAGPPGVKRPP--PPLMNGLPPRP-PLPESLPPPPPGGLPLPPMPPTGPAPSGPPG 276
PP LP G P PP G P P P S PP P PP P G P
Sbjct: 126 PPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDS--- 182
Query: 277 PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGV 336
+PPP P P P+ P + PP PG G P+PG P PP PG
Sbjct: 183 ---IPPPVPST--PRPIQSSPHNRGSPPVPG------GPRQPSPGPTP------PPFPGN 225
Query: 337 HPPAPG--------VHPPAP-GVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVH----PAA 383
A G + +P PP P A PPP P +H P
Sbjct: 226 RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 384 PAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPS------------ 431
P + + P P P QAP PP PS PG P PP +
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAP-----PPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS 340
Query: 432 ---------NPGVHPPTPMPPMLRPPLPSEGP----GNIPPPPPTN 464
+PG P P PP RPP P P G +PPPPP +
Sbjct: 341 LSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVS 386
Score = 85.9 bits (211), Expect = 7e-17
Identities = 84/270 (31%), Positives = 98/270 (36%), Gaps = 71/270 (26%)
Query: 220 PPSLPAGPPGVKRPP-----PPLMNGLPPRPPLPESLPPPPPGGL------------PL- 261
PP +P+ P ++ P PP+ G PR P P PPP PG PL
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGG--PRQPSPGPTPPPFPGNRGTALGGGSIRQSPLS 241
Query: 262 --------PPMPPTGPAPSGPPGPPQLPPPA---PGVHPPAPVVHPPASGVHPPAPGVH- 309
PP+PPT P+ + PP PPP P +H A V PP PP P
Sbjct: 242 SSSPFSNRPPLPPT-PSRALDDKPPPPPPPVGNRPSIHREA-VPPPPPQNNKPPVPSTPR 299
Query: 310 --------PPAPGVHPPAPGVHPPTSGVHPPAPGVH----------PPAPGVHPPAPGVH 351
PP P P P PP+S + P + PP P P G
Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPS--PGRSGPL 357
Query: 352 PPAPGVHPPAPGVHPPPSAGVHPQAPGVH---------PAAPAVHPQAPGVHPPAPGMHP 402
PP P PP P PP +G P P V PA P + P GV P G P
Sbjct: 358 PPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQL-PSRSGVDSPRSGPRP 416
Query: 403 QAPGVHPQPPGVHPSAPGVHPQPPGVHPSN 432
P PP PSA P PP N
Sbjct: 417 ------PLPPD-RPSAGAPPPPPPSTSIRN 439
Score = 85.5 bits (210), Expect = 9e-17
Identities = 67/182 (36%), Positives = 72/182 (39%), Gaps = 30/182 (16%)
Query: 215 EKPPAPPSLPAGPPGVKR---PPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAP 271
+KPP PP P + R PPPP N PP P P P P PP PP+
Sbjct: 262 DKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPR---PSASSQAPPPPPPPS---- 314
Query: 272 SGPPGPPQLPPPAPG--VHPPAPVVHPPASGVHPPAP-----GVHPPAPGVHPPAPGVHP 324
PGPP LPP + G P P + S PP P G PP P PP P P
Sbjct: 315 --RPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDP 372
Query: 325 P-TSGVHPPAPGVHP--------PAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQ 375
P SG PP P V PA P GV P G PP P PSAG P
Sbjct: 373 PGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLP--PDRPSAGAPPP 430
Query: 376 AP 377
P
Sbjct: 431 PP 432
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 99.0 bits (245), Expect = 8e-21
Identities = 97/303 (32%), Positives = 115/303 (37%), Gaps = 62/303 (20%)
Query: 216 KPPAPPS----LPAGPPGVKR-PPPPLMNGLPPRPP----LPESLPPPPPGG-LPLPPMP 265
KP +PPS P PG + PP P N +PP P P+S+PPP P P+ P
Sbjct: 139 KPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSP 198
Query: 266 P---TGPAPSGP--PGPPQLPPPAPGVHPPA---------PVVHPPASGVHPPAPGVHPP 311
+ P P GP P P PPP PG A P+ PP P
Sbjct: 199 HNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSR 258
Query: 312 APGVHPPAPGVHPPTSG----VH------PPAPGVHPPAPGVHPPAPGVHPPAPGVHPPA 361
A PP P PP G +H PP PP P P+ P P P
Sbjct: 259 ALDDKPPPP---PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSR 315
Query: 362 PGVHP-PPSAGVHPQAPGV--------HPAAPAVHPQAPGVHPPAPGMHPQAP------- 405
PG P PPS+ + + P + P P G PP P P P
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGR 375
Query: 406 -GVHPQPPGV--HPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGP--GNIPPP 460
G P PP V + S P P + PS GV P P RPPLP + P G PPP
Sbjct: 376 SGPLPPPPPVSRNGSTSRALPATPQL-PSRSGVDSPRSGP---RPPLPPDRPSAGAPPPP 431
Query: 461 PPT 463
PP+
Sbjct: 432 PPS 434
Score = 91.3 bits (225), Expect = 2e-18
Identities = 87/286 (30%), Positives = 100/286 (34%), Gaps = 66/286 (23%)
Query: 220 PPSLPAGPPGVKRPP--PPLMNGLPPRP-PLPESLPPPPPGGLPLPPMPPTGPAPSGPPG 276
PP LP G P PP G P P P S PP P PP P G P
Sbjct: 126 PPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDS--- 182
Query: 277 PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGV 336
+PPP P P P+ P + PP PG G P+PG P PP PG
Sbjct: 183 ---IPPPVPST--PRPIQSSPHNRGSPPVPG------GPRQPSPGPTP------PPFPGN 225
Query: 337 HPPAPG--------VHPPAP-GVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVH----PAA 383
A G + +P PP P A PPP P +H P
Sbjct: 226 RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 384 PAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPS------------ 431
P + + P P P QAP PP PS PG P PP +
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAP-----PPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS 340
Query: 432 ---------NPGVHPPTPMPPMLRPPLPSEGP----GNIPPPPPTN 464
+PG P P PP RPP P P G +PPPPP +
Sbjct: 341 LSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVS 386
Score = 85.9 bits (211), Expect = 7e-17
Identities = 84/270 (31%), Positives = 98/270 (36%), Gaps = 71/270 (26%)
Query: 220 PPSLPAGPPGVKRPP-----PPLMNGLPPRPPLPESLPPPPPGGL------------PL- 261
PP +P+ P ++ P PP+ G PR P P PPP PG PL
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGG--PRQPSPGPTPPPFPGNRGTALGGGSIRQSPLS 241
Query: 262 --------PPMPPTGPAPSGPPGPPQLPPPA---PGVHPPAPVVHPPASGVHPPAPGVH- 309
PP+PPT P+ + PP PPP P +H A V PP PP P
Sbjct: 242 SSSPFSNRPPLPPT-PSRALDDKPPPPPPPVGNRPSIHREA-VPPPPPQNNKPPVPSTPR 299
Query: 310 --------PPAPGVHPPAPGVHPPTSGVHPPAPGVH----------PPAPGVHPPAPGVH 351
PP P P P PP+S + P + PP P P G
Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPS--PGRSGPL 357
Query: 352 PPAPGVHPPAPGVHPPPSAGVHPQAPGVH---------PAAPAVHPQAPGVHPPAPGMHP 402
PP P PP P PP +G P P V PA P + P GV P G P
Sbjct: 358 PPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQL-PSRSGVDSPRSGPRP 416
Query: 403 QAPGVHPQPPGVHPSAPGVHPQPPGVHPSN 432
P PP PSA P PP N
Sbjct: 417 ------PLPPD-RPSAGAPPPPPPSTSIRN 439
Score = 85.5 bits (210), Expect = 9e-17
Identities = 67/182 (36%), Positives = 72/182 (39%), Gaps = 30/182 (16%)
Query: 215 EKPPAPPSLPAGPPGVKR---PPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAP 271
+KPP PP P + R PPPP N PP P P P P PP PP+
Sbjct: 262 DKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPR---PSASSQAPPPPPPPS---- 314
Query: 272 SGPPGPPQLPPPAPG--VHPPAPVVHPPASGVHPPAP-----GVHPPAPGVHPPAPGVHP 324
PGPP LPP + G P P + S PP P G PP P PP P P
Sbjct: 315 --RPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDP 372
Query: 325 P-TSGVHPPAPGVHP--------PAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQ 375
P SG PP P V PA P GV P G PP P PSAG P
Sbjct: 373 PGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLP--PDRPSAGAPPP 430
Query: 376 AP 377
P
Sbjct: 431 PP 432
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 98.6 bits (244), Expect = 1e-20
Identities = 90/264 (34%), Positives = 105/264 (39%), Gaps = 41/264 (15%)
Query: 221 PSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQL 280
P+ PA P PPP LM+ RPP S P P M GP G GP
Sbjct: 346 PAAPANNP----PPPSLMSTTQSRPPWMNS---GPSESRPYHGMHGGGPGGPGG-GPHSF 397
Query: 281 PPPAP---GVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP--- 334
P P P G H P+ H P PP P + PP P P G HPP G H P P
Sbjct: 398 PHPLPSLTGGHGGHPMQHNPNG---PPPPWMQPPPP---PMNQGPHPP--GHHGPPPMDQ 449
Query: 335 --GVHPPAPGVHP--PAPGVHPPAP-GVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQ 389
G P GV+ G+ PP P G+ PP P PPPS P G P Q
Sbjct: 450 YLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPP---PPPSGQPPPPPSGPLPPWQQQQQQ 506
Query: 390 APGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPP-----GVHPSNPGVHP----PT- 439
P PP+ M P Q ++ G PP ++PG PT
Sbjct: 507 PPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTM 566
Query: 440 -PMPPMLRPPLPSEGPGNIPPPPP 462
P+PP ++PPLP P PPPPP
Sbjct: 567 VPLPPGVQPPLPPGAPPPPPPPPP 590
Score = 82.0 bits (201), Expect = 1e-15
Identities = 73/234 (31%), Positives = 86/234 (36%), Gaps = 28/234 (11%)
Query: 226 GPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQL----- 280
GP P P L G P PPPP P PP GP P G GPP +
Sbjct: 393 GPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLG 452
Query: 281 -PPPAPGV---HPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAP-GVHPPTSGVHPPAPG 335
P GV H ++ PP G+ PP P PP G PP P G PP P
Sbjct: 453 STPVGSGVYRLHQGKGMMPPPPMGMMPPPP---PPPSGQPPPPPSGPLPPWQQQQQQPPP 509
Query: 336 VHPPAPGV--HPPAPGVHPPAPGVHPPAPGVHPP-----PSAGVHPQAPGVHPAAPAVHP 388
PP+ + P P G PP +A P AP + P + P
Sbjct: 510 PPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQ-GNPTMVP 568
Query: 389 QAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVH-PQPPGVHPSNPGVHPPTPM 441
PGV PP P PG P PP P + G+ P G PS+ P P+
Sbjct: 569 LPPGVQPPLP------PGAPPPPPPPPPGSAGMMIPPRGGDGPSHESEDFPRPL 616
Score = 75.1 bits (183), Expect = 1e-13
Identities = 66/205 (32%), Positives = 77/205 (37%), Gaps = 36/205 (17%)
Query: 279 QLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHP 338
+ P PA P P AS P AP +PP P + T+ PP
Sbjct: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSL--------MSTTQSRPPWMN--- 370
Query: 339 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVH----PQAPGVH 394
P P G+H PG P P P P G H P H P P +
Sbjct: 371 SGPSESRPYHGMHGGGPGGPGGGPHSFPHPL----PSLTGGHGGHPMQHNPNGPPPPWMQ 426
Query: 395 PPAPGMH--PQAPGVHPQPP-----GVHPSAPGVH--PQPPGVHPSNP-GVHPPTPMPPM 444
PP P M+ P PG H PP G P GV+ Q G+ P P G+ PP P PP
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPS 486
Query: 445 LRPPLPSEGP-------GNIPPPPP 462
+PP P GP PPPPP
Sbjct: 487 GQPPPPPSGPLPPWQQQQQQPPPPP 511
Score = 73.9 bits (180), Expect = 3e-13
Identities = 55/182 (30%), Positives = 72/182 (39%), Gaps = 22/182 (12%)
Query: 214 MEKPPAPPSLPAGPPGVKRPPP--------PLMNG---------LPPRPPLPESLPPPPP 256
M+ PP P + PPG PPP P+ +G + P PP+ +PPPPP
Sbjct: 425 MQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMG-MMPPPPP 483
Query: 257 GGLPLPPMPPTGPAP---SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAP 313
PP PP+GP P PP PPP+ + P+ + + G P
Sbjct: 484 PPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPP 543
Query: 314 GVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPP-APGVHPPAPGVHPPAPGVHPPPSAGV 372
A P + P + P PGV PP PG PP P P + G+ PP G
Sbjct: 544 WQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMIPPRGGD 603
Query: 373 HP 374
P
Sbjct: 604 GP 605
Score = 49.7 bits (117), Expect = 6e-06
Identities = 39/126 (30%), Positives = 50/126 (39%), Gaps = 26/126 (20%)
Query: 363 GVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGM----HPQAPGVHPQPP------ 412
G P P++ P P A A P AP +PP P + + P ++ P
Sbjct: 321 GEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
Query: 413 GVHPSAPG---------VHPQP--PGVHPSNPGVHPPT-PMPPMLRPPLPSEGPGNIPP- 459
G+H PG HP P G H +P H P P PP ++PP P G PP
Sbjct: 381 GMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPG 440
Query: 460 ---PPP 462
PPP
Sbjct: 441 HHGPPP 446
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 98.2 bits (243), Expect = 1e-20
Identities = 84/236 (35%), Positives = 99/236 (41%), Gaps = 28/236 (11%)
Query: 216 KPPAPPSLPAGPPGVKRPPPP--LMNGLPPRPPLPESLP-PPPPGGLPLPPMPPTGPAPS 272
KP PP G P P + +GLPP P ++P P P G+ P +PPTGP P
Sbjct: 26 KPGQPPQGWPGSNPWNNPSAPSSVPSGLPPSAT-PSTVPFGPAPTGM-YPSVPPTGP-PP 82
Query: 273 GPPGPPQLPPPAPGVHPP-APVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
GPP P PP P PP P P G P P P P P P P
Sbjct: 83 GPPAP--FPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAG 140
Query: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAP--AVHPQ 389
P + G P G P P + P+PG +P P PQAPG P P V P
Sbjct: 141 PLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPP---PQAPGAAPPVPWGTVPPG 197
Query: 390 APGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQP--PGVHPSNPGVHPPTPMPP 443
A G PPAP +P P G +P+ PG++P P P PS P PP P P
Sbjct: 198 AWG--PPAP---------YPAPTGSYPT-PGLYPTPSNPFQVPSGPSGAPPMPGGP 241
Score = 90.5 bits (223), Expect = 3e-18
Identities = 84/249 (33%), Positives = 101/249 (40%), Gaps = 41/249 (16%)
Query: 237 LMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHP 296
L + LP P S G P P + P + P P +P P P+ V
Sbjct: 7 LADALPEHSPAKTSAVSNTKPGQPPQGWPGSNPW-NNPSAPSSVPSGLPPSATPSTVPFG 65
Query: 297 PA-SGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAP 355
PA +G++P P PP PG PPAP P SG P PG PAP V P PG P P
Sbjct: 66 PAPTGMYPSVPPTGPP-PG--PPAPF---PPSGPSCPPPGGPYPAPTV--PGPGPTGPYP 117
Query: 356 GVHPPAPGVHPPPSAGVHPQAPGVHPAAP----AVHPQAPGV--HPPAPGMHPQAPGVHP 409
+ P P + P A P A G P P + P APG+ P P M +PG +P
Sbjct: 118 TPNMPFPELPRPYGAPTDPAAAG--PLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYP 175
Query: 410 QPPGVHPSAPGVHPQ------------PPGVHPSNPGVHP-----PTPMPPMLRPPLPSE 452
PP P APG P PP +P+ G +P PTP P P
Sbjct: 176 APPP--PQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTPGLYPTPSNPFQVP----S 229
Query: 453 GPGNIPPPP 461
GP PP P
Sbjct: 230 GPSGAPPMP 238
Score = 59.3 bits (142), Expect = 7e-09
Identities = 67/184 (36%), Positives = 74/184 (40%), Gaps = 34/184 (18%)
Query: 295 HPPA--SGVHPPAPGVHPPA-----PGVHPPAPGVHPPTSGVHPPA-PGVHP--PAP-GV 343
H PA S V PG P P +P AP P SG+ P A P P PAP G+
Sbjct: 14 HSPAKTSAVSNTKPGQPPQGWPGSNPWNNPSAPSSVP--SGLPPSATPSTVPFGPAPTGM 71
Query: 344 HPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQ 403
+P P PP PG PPAP PPS P G +PA P PG P P P
Sbjct: 72 YPSVPPTGPP-PG--PPAPF---PPSGPSCPPPGGPYPA-----PTVPGPGPTGPYPTPN 120
Query: 404 APGVH-PQPPGVHPSAPGVHPQPP----GVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIP 458
P P+P G P P P PG+ P P M P PS GP P
Sbjct: 121 MPFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNM---PYPSPGP--YP 175
Query: 459 PPPP 462
PPP
Sbjct: 176 APPP 179
Score = 42.0 bits (97), Expect = 0.001
Identities = 36/112 (32%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 362 PGVHPPPSAGVHPQAPGVHPAA-----PAVHPQAPGVHPPA--PGMHPQAPGVHPQPPGV 414
P P ++ V PG P P +P AP P P P P P G+
Sbjct: 12 PEHSPAKTSAVSNTKPGQPPQGWPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPAPTGM 71
Query: 415 HPSAP--GVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN 464
+PS P G P PP P + G P P P P +P GPG P P N
Sbjct: 72 YPSVPPTGPPPGPPAPFPPS-GPSCPPPGGPYPAPTVP--GPGPTGPYPTPN 120
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 97.8 bits (242), Expect = 2e-20
Identities = 98/298 (32%), Positives = 119/298 (39%), Gaps = 60/298 (20%)
Query: 216 KPPAPPSLPAGPPGVK--RPP---PPLMNGLPPRPPLPES-LPPPPPGGLPLPPMPPTGP 269
+ PA PS P P G++ RPP PP + P PL S L P P PP P P
Sbjct: 255 RAPAHPSQPK-PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSA---PPSPSAPP 310
Query: 270 APSGPPGPPQLPPPAPGVHPPAPVVH--------PPASGVHPPAPGVHPPA----PGVHP 317
+ P PP PP +P + PP S + P P PPA P P
Sbjct: 311 SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQA-PPALALPPLQAP 369
Query: 318 PAPGVHPPTSGVHPPAPGVHPPAPGVH--------PPAPGVHPP-APGVHPP-APGVHPP 367
P+P PP S + P+P P A VH PP+P V P +P PP +P PP
Sbjct: 370 PSPPASPPLSPLATPSPQA-PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 428
Query: 368 PSAGVHPQAP--GVHPAAPAVHPQAPGVHPP--------APGMH-----PQAPGVHPQPP 412
A AP V P+ PA P +P PP AP + PQAP PP
Sbjct: 429 SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP 488
Query: 413 -GVHPSAPGVHP-----QPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN 464
PS P P P P +P PP PP+L PL +PP PP +
Sbjct: 489 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL-----QVPPSPPAS 541
Score = 92.4 bits (228), Expect = 8e-19
Identities = 92/289 (31%), Positives = 116/289 (40%), Gaps = 44/289 (15%)
Query: 211 HFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPA 270
H E PA P+ G++RP ++ P + P G P P P+ P
Sbjct: 206 HSTTEPSPAARRRPSAGGGLQRPASRSLSS-SATPLSSPARSGPSARGTPRAPAHPSQPK 264
Query: 271 PSGPPG--PPQLPPP----APGVHP--PAPVVHPPASGVHPPAPGVHP-----PAPGVHP 317
P G PPQ+ PP AP + P +P+ P S PP+P P P+P P
Sbjct: 265 PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSA--PPSPSAPPSLQTLPSPPATP 322
Query: 318 PAPGVHPPTSGVHPPAPGVHP--PAPGVHPPA--PGVHPPA----PGVHPPAPGVHPP-- 367
P+ TS P H P+P + P A P PPA P PP+P PP
Sbjct: 323 PSQAT---TSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLS 379
Query: 368 PSAGVHPQAP---GVH----PAAPAVHP--QAPGVHPPAPGMHPQAPGVHPQPPGVHPSA 418
P A PQAP VH P +P P QAP P +P + P A PP +
Sbjct: 380 PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 439
Query: 419 PGVHPQPPGVHPSNPGVHPPTPMPPML-RPPL-----PSEGPGNIPPPP 461
V P PP P +P PP PP L PPL P + P + PP
Sbjct: 440 LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP 488
Score = 82.0 bits (201), Expect = 1e-15
Identities = 94/325 (28%), Positives = 107/325 (32%), Gaps = 88/325 (27%)
Query: 217 PP--APPSLPAGPP--GVKRPPPPLMNGL-----------PPRPPL-----PESLPPPPP 256
PP APPS PA PP + P P N L PP PP+ P + PP P
Sbjct: 364 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 423
Query: 257 GGLPLPPMPPTGPAP--SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPG 314
P PP+ AP PP PP PP +P PP P PP + PP PP
Sbjct: 424 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP-PQAPPPLAA--PPLQLAKPPPQA 480
Query: 315 VHPPAPGVHPPTSGVHPPA--PGVHPPAPGVHPPAPGVHPPAPGVHP----PAPGVHPPP 368
PPA P + PPA PG P +P P + P P P P V P P
Sbjct: 481 --PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP 538
Query: 369 SAGVHPQAPGVHPAAPAVHPQAPGVH---------PPAPGMHPQAP-------------- 405
A QAP P P G PP P P +
Sbjct: 539 PASPTLQAPR-RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 597
Query: 406 ---------------GVHPQPP------GVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPM 444
G PP HP+A P PP PG P P PP
Sbjct: 598 STPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGA--PLPWPPA 655
Query: 445 LRPP--------LPSEGPGNIPPPP 461
P +EGP + P P
Sbjct: 656 TGPGSADGLCTIYETEGPESATPAP 680
Score = 79.0 bits (193), Expect = 9e-15
Identities = 79/270 (29%), Positives = 95/270 (35%), Gaps = 43/270 (15%)
Query: 214 MEKPPAPPSLPAGPPGVKRPP--------PPLMNGLPPRPPLPESLPPPPPGGLPLPP-- 263
++ PP+PP+ P P PP PPL PP P P +L PP LP PP
Sbjct: 440 LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPP-PQAPPALATPPLQALPSPPAS 498
Query: 264 ---MPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAP 320
P P+ S P P PPP AP++ P S P +P + P PP P
Sbjct: 499 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS--PPASPTLQAPR---RPPTP 553
Query: 321 GVHPPTSGVH---PPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAP 377
G SG APG PP P P+ + P H + P G
Sbjct: 554 GPDTSVSGPRLTLALAPG--PPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE 611
Query: 378 GVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVH-PQPPGVHPSN---- 432
G A+P + HP A P PP APG P PP P +
Sbjct: 612 GGAAASPPPDAELAACHPAAWSR-------GPAPPLAFRGAPGAPLPWPPATGPGSADGL 664
Query: 433 ------PGVHPPTPMPPMLRP-PLPSEGPG 455
G TP P L P P P G
Sbjct: 665 CTIYETEGPESATPAPGALDPGPSPGTSGG 694
Score = 71.2 bits (173), Expect = 2e-12
Identities = 87/304 (28%), Positives = 102/304 (33%), Gaps = 62/304 (20%)
Query: 219 APPSLPAGPPGVKRPPPPL---------MNGLPPRPPL------------PESLPPPPPG 257
AP L PPG RPPPP+ G R PL PES P P
Sbjct: 21 APGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPT 80
Query: 258 GLPLPPMPPTG----PAPSGPPGPPQLPPPAPGVHPPAPVVHP--PASGVHPPAPGVHPP 311
PP G PA + PGP P A G P P+ S A G
Sbjct: 81 RTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATE 140
Query: 312 APGVHPPAPGVHPPTSGVHPPAPGVHPPA-----------PGVHPPAPGVHPPAPGVHP- 359
AP + G TSG P PG PA G+ PAP P P P
Sbjct: 141 APKRSALSAGARRDTSG---PTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPR 197
Query: 360 -------------PAPGVHPPPSAGVHPQAPGVHPAAPAVHP-QAPGVHPPAPGMHPQAP 405
P+P PSAG Q P + + P +P P+ P+AP
Sbjct: 198 KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 257
Query: 406 G--VHPQPPGVHP-SAPGVHPQPPGVHPS-NPGVHPPTPMPPMLRPPLPSEGPG--NIPP 459
P+P G+ P V P P+ P P P PP PS P +P
Sbjct: 258 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPS 317
Query: 460 PPPT 463
PP T
Sbjct: 318 PPAT 321
Score = 65.1 bits (157), Expect = 1e-10
Identities = 97/355 (27%), Positives = 115/355 (32%), Gaps = 115/355 (32%)
Query: 218 PAPPSLPAGPPGVKRPPPPLMNGL----------------PPRPPLPESLPPPPPGGLPL 261
P P S P G RP P GL P R L G P
Sbjct: 102 PGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPG 161
Query: 262 PPMPPTG--------------PAPSGPPGPPQLPP--------------PAP-------- 285
P P PAPS P PP P P+P
Sbjct: 162 TPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA 221
Query: 286 --GVHPPA---------PVVHPPASGVH----PPAPGVHPPAP------GVHPP------ 318
G+ PA P+ P SG P AP HP P + PP
Sbjct: 222 GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAP-AHPSQPKPKGLQALRPPQVTPPR 280
Query: 319 ---APGVHP-PTSGVHPPAPGVHPPAPGVHP-----PAPGVHPPAPGV----HPPAPGVH 365
AP + P +S + P+P PP+P P P+P PP+ P H
Sbjct: 281 KDAAPALGPLSSSPLATPSPSA-PPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATH 339
Query: 366 -----PP--PSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGM---HPQAP---GVH-PQP 411
PP P A PQAP P P +P PP + PQAP VH Q
Sbjct: 340 SFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQA 399
Query: 412 PGVHPSAPGVHP--QPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPPTN 464
P P +P V PP P +P PP+ PP L P P +PP PP +
Sbjct: 400 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP-----PLQVPPSPPAS 449
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 97.8 bits (242), Expect = 2e-20
Identities = 88/268 (32%), Positives = 103/268 (38%), Gaps = 50/268 (18%)
Query: 228 PGVKRPPPPLMNG------LPPRPP----------LPESLPPPPPGGLPLPPMPPTGPAP 271
PG + P P L N +PP P + PP P P PP PP P P
Sbjct: 126 PGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPP 185
Query: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
PP P P P V PP P+ V PP P PP P PP P PP S +
Sbjct: 186 LPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSD 245
Query: 332 PAPGVHPPAPGVH-PPAPGVHPPAPGVHPPA--PGVHPPPSAGVHPQAPGVHPAAPAVHP 388
A V P +H PP P PP P + PP PG+ P++ PA A P
Sbjct: 246 KA--VKPQLAPLHLPPIP---PPLP-LLPPCGYPGLKAEPAS----------PAQDAQEP 289
Query: 389 QAPGVH-PPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPP-----GVHPSNPGVH--PPTP 440
AP PP P+A P PGV+ S+ P PP P G P P
Sbjct: 290 PAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPP 349
Query: 441 MPPMLRPPL-------PSEGPGNIPPPP 461
PP +P L P G G + PPP
Sbjct: 350 APPGSQPFLQKKRHGRPGAGGGKLNPPP 377
Score = 94.4 bits (233), Expect = 2e-19
Identities = 85/253 (33%), Positives = 98/253 (38%), Gaps = 43/253 (16%)
Query: 211 HFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLP-------PPPP---GGLP 260
H P P++PA PP PPPP P PPLP S P PP P G LP
Sbjct: 159 HGAARTAPPRPNVPAPPPPTPPPPPP-----PLPPPLPSSSPIKTPLVSPPGPLTKGNLP 213
Query: 261 L--PPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVH-PPAPGVHP 317
+ PP+P P P PP PP PPP PPA V+ A V P +H PP P P
Sbjct: 214 VVAPPVPCAPPPP--PPPPPPTPPPL----PPASVLSDKA--VKPQLAPLHLPPIPPPLP 265
Query: 318 PAPGVHPPTSGVHPPAP---GVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHP 374
P P P +P PPAP PP P +P PAP P P
Sbjct: 266 LLPPCGYPGLKAEPASPAQDAQEPPAP--PPPLPPYASCSPRASLPAP---PLPGVNSSS 320
Query: 375 QAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPG 434
+ P P + P++P P QA P PPG P PG + G
Sbjct: 321 ETP------PPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPG---AGGG 371
Query: 435 VHPPTPMPPMLRP 447
P P PP P
Sbjct: 372 KLNPPPAPPARSP 384
Score = 82.8 bits (203), Expect = 6e-16
Identities = 71/227 (31%), Positives = 84/227 (37%), Gaps = 30/227 (13%)
Query: 244 RPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHP 303
R P P LP G +PP P S G + PP P V P P PP
Sbjct: 129 RAPSPR-LPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPP------ 181
Query: 304 PAPGVHPPAPGVHP-PAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAP 362
P P + PP P P P V PP P V PP P PP P PP P PP P
Sbjct: 182 PPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPP---PPPPPTPPPLP 238
Query: 363 GVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQA-PGVHPQPPGVHPSAPGV 421
V PQ +H P + PP P + P PG+ +P A
Sbjct: 239 PASVLSDKAVKPQLAPLH---------LPPIPPPLPLLPPCGYPGLKAEPASPAQDAQ-- 287
Query: 422 HPQPPGVHPSNPGVHPPTPMPPMLRPPLP-----SEGPGNIPPPPPT 463
+PP P P +P + PPLP SE P +PP P+
Sbjct: 288 --EPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPS 332
Score = 74.7 bits (182), Expect = 2e-13
Identities = 87/309 (28%), Positives = 98/309 (31%), Gaps = 82/309 (26%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTG-------- 268
PP PP LP PP + PPPP P S PP L P G
Sbjct: 5 PPPPPPLPPPPPPLGAPPPP-----------PPSAPPVSTDTSSLRRADPKGRSALLADI 53
Query: 269 ---------------PAPS------------------GPPGPPQLPPPAPGVHPPAPVVH 295
AP G PP L G PV+
Sbjct: 54 QQGTRLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAG---GFPVLR 110
Query: 296 PP-----ASGVHPPAPGVHPPAPGVH---------PPAPGVHPPTSGVHPPAPGVHPPAP 341
P A G PG P+P + PPA TS H A PP P
Sbjct: 111 PAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAH-GAARTAPPRP 169
Query: 342 GV-HPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGM 400
V PP P PP P + PP P P + V P P P V P P PP P
Sbjct: 170 NVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPP 229
Query: 401 HPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPP-------MLRPPLPSEG 453
P P P PP S V PQ +H P + PP P+ P P P++
Sbjct: 230 PPPTP--PPLPPASVLSDKAVKPQLAPLH--LPPIPPPLPLLPPCGYPGLKAEPASPAQD 285
Query: 454 PGNIPPPPP 462
P PPP
Sbjct: 286 AQEPPAPPP 294
Score = 64.7 bits (156), Expect = 2e-10
Identities = 69/242 (28%), Positives = 92/242 (38%), Gaps = 28/242 (11%)
Query: 241 LPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV------- 293
+P PP P LPPPPP PP PP+ P S + P A +
Sbjct: 1 MPVPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLADIQQGTRLR 60
Query: 294 ----VHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSG-VHPPAPGVHPPAPGVHPPAP 348
++ ++ + G + G PPT G + V PA G A
Sbjct: 61 KVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPA-GQRDVAG 119
Query: 349 GVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAV--HPQAPGVHPPAPGMHPQAPG 406
G PG P+P + +G P + PA+P + +A G AP P P
Sbjct: 120 GKTGQGPGSRAPSPRLPNKTISG-----PLIPPASPRLGNTSEAHGAARTAP-PRPNVPA 173
Query: 407 VHPQPPGVHPSAPGVHPQPPGVHP-SNPGVHPPTPMP----PMLRPPLPSEGPGNIPPPP 461
P PP P P + P P P P V PP P+ P++ PP+P P PPPP
Sbjct: 174 --PPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPP 231
Query: 462 PT 463
PT
Sbjct: 232 PT 233
Score = 63.9 bits (154), Expect = 3e-10
Identities = 66/244 (27%), Positives = 84/244 (34%), Gaps = 35/244 (14%)
Query: 251 LPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV----------------- 293
+PPPPP LP PP PP G P PP P + + P
Sbjct: 3 VPPPPPPPLP-PPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLADIQQGTRLRK 61
Query: 294 ---VHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSG--------VHPPAPGVHPPAPG 342
++ ++ + G + G PPT G V PA G A G
Sbjct: 62 VTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPA-GQRDVAGG 120
Query: 343 VHPPAPGVHPPAPGV-HPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMH 401
PG P+P + + G PP++ H AA P+ PP P
Sbjct: 121 KTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPP 180
Query: 402 PQAPGVHPQPPGVHP-SAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPP 460
P P + P P P P V P P + P V PP P P PP P P PP
Sbjct: 181 PPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAP---PPPPPPPPPTPPPL 237
Query: 461 PPTN 464
PP +
Sbjct: 238 PPAS 241
Score = 57.0 bits (136), Expect = 4e-08
Identities = 47/134 (35%), Positives = 51/134 (38%), Gaps = 28/134 (20%)
Query: 217 PPAPPSLP----AGPPGVKRPP--PPLMNGLPPRPPLPESLPP----PPPGGLPLPPMPP 266
PP PP LP G PG+K P P PP PP P LPP P LP PP+P
Sbjct: 258 PPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPP--LPPYASCSPRASLPAPPLPG 315
Query: 267 TGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHP-------PAPGV---- 315
S PP LPP +P P A P PG P PG
Sbjct: 316 VN---SSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPGAGGGK 372
Query: 316 --HPPAPGVHPPTS 327
PPAP PT+
Sbjct: 373 LNPPPAPPARSPTT 386
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 96.7 bits (239), Expect = 4e-20
Identities = 85/248 (34%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 243 PRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPA-----PVVHPP 297
P P+P+ LP +P+PP+P PAP P PPQ+PP PG PP P P
Sbjct: 654 PVSPIPKPLP------VPVPPIPV--PAPITVP-PPQVPPHQPG--PPVVGALQPPAFTP 702
Query: 298 ASGVHPP--APGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPA--PGVHPPA--PGVH 351
G+ PP PGV PP PP P + P + +H P PG PP P + PP P H
Sbjct: 703 PLGIPPPGFGPGVPPPP----PPPPFLRPGFNPMHLP-PGFLPPGPPPPITPPVSIPPPH 757
Query: 352 PPAPGVHPPAPGVHPPPSAG--VHPQAPGVHPAAPAVHPQAPGVHP----------PAPG 399
P + G +G V V PAAP P P P P P
Sbjct: 758 TPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPV 817
Query: 400 MHPQAPGVHPQPPGVHPSAPGVHP--QPPGVHPSNP---GVHPPTPMPPMLRPPLPSEGP 454
+ QAP G+ + PG+ P +PPG+ P + + PP PMPP + P GP
Sbjct: 818 IGLQAPST-----GLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGP 872
Query: 455 GNIPPPPP 462
G PPP
Sbjct: 873 GGFAMPPP 880
Score = 78.6 bits (192), Expect = 1e-14
Identities = 82/253 (32%), Positives = 97/253 (38%), Gaps = 28/253 (11%)
Query: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPP--PPGGLPLPPMPPTGPAPSGP 274
PP PP L G + PP L G PP P S+PPP PP +P G A SG
Sbjct: 719 PPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGD 778
Query: 275 PGP---PQLPPPAPGVHPPAPVVHPPA-SGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH 330
+PP AP P PV P + G APG P G+ P+ G+ G+
Sbjct: 779 SVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPG---PVIGLQAPSTGLLGARPGLI 835
Query: 331 P--PAPGVHPPAPGVHPPAPGVHPPAPGVH---PPAPG--VHPPPSAGVHPQAPGVHPAA 383
P PG+ PP P P P +H PP PG PPP H P
Sbjct: 836 PLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPP----HGMKGPFPPHG 891
Query: 384 PAVHPQA-PGVHPPAPGM-HPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPM 441
P V P PG+ P PG P+ QP P P PQP P P
Sbjct: 892 PFVRPGGMPGLGGPGPGPGGPEDRDGRQQP----PQQPQQQPQPQA--PQQPQQQQQQQP 945
Query: 442 PPMLRPPLPSEGP 454
PP +PP + P
Sbjct: 946 PPSQQPPPTQQQP 958
Score = 45.4 bits (106), Expect = 1e-04
Identities = 37/116 (31%), Positives = 43/116 (37%), Gaps = 17/116 (14%)
Query: 214 MEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPP------PGGLPLPPMPPT 267
+++ P P P P + R PPP G PP P PP PGG +P +
Sbjct: 848 LQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGG--MPGLGGP 905
Query: 268 GPAPSGPPG------PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHP 317
GP P GP PPQ P P P AP P P P PP P
Sbjct: 906 GPGPGGPEDRDGRQQPPQQPQQQP--QPQAP-QQPQQQQQQQPPPSQQPPPTQQQP 958
Score = 42.7 bits (99), Expect = 7e-04
Identities = 36/107 (33%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Query: 360 PAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP------GVHPPAPGMHPQAPGVHPQPPG 413
PA V P P+A V P A A+P PQAP G+ PA H P+ G
Sbjct: 290 PAAAVPPAPTATV-PAAAAPAAASPPP-PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMG 347
Query: 414 VHPSAPGVH--PQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIP 458
+ P H P PP G+ P P PPM +P +P P P
Sbjct: 348 IQQD-PMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 393
Score = 40.8 bits (94), Expect = 0.003
Identities = 41/137 (29%), Positives = 45/137 (32%), Gaps = 12/137 (8%)
Query: 267 TGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPT 326
T PA + PP P P A P A PP + P G+ PA H P
Sbjct: 288 TAPAAAVPPAPTATVPAAAA--PAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRM 345
Query: 327 SGVH--PPAPGVHPPAPGVHP-----PAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGV 379
G+ P V P G P P P P A V PP P V P A Q
Sbjct: 346 MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN--- 402
Query: 380 HPAAPAVHPQAPGVHPP 396
P H Q V P
Sbjct: 403 EPLTQKPHQQEMEVEQP 419
Score = 39.3 bits (90), Expect = 0.008
Identities = 34/107 (31%), Positives = 41/107 (38%), Gaps = 9/107 (8%)
Query: 250 SLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPP--PAPGVHPPAPVVHPPASGVHPPAPG 307
++PP P +P PA + PP PPQ P P G+ PA H P G
Sbjct: 293 AVPPAPTATVPAA----AAPAAASPP-PPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMG 347
Query: 308 V-HPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPP 353
+ P P P P G+ P P P A V PP P V P
Sbjct: 348 IQQDPMHHQVPLPPNGQMPGFGL-LPTPPFPPMAQPVIPPTPPVQQP 393
Score = 37.4 bits (85), Expect = 0.029
Identities = 29/82 (35%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 218 PAPPSLPAGPPGVKRPPP------------PLMNGLPPRP-----PLPESLPPPPPGGLP 260
P PP P G PG P P M G+ P PLP + P G LP
Sbjct: 313 PPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLP 372
Query: 261 LPPMPPTGPAPSGPPGPPQLPP 282
PP PP P PP PP P
Sbjct: 373 TPPFPPMA-QPVIPPTPPVQQP 393
Score = 33.1 bits (74), Expect = 0.55
Identities = 36/115 (31%), Positives = 43/115 (37%), Gaps = 13/115 (11%)
Query: 304 PAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPG 363
PA V PPAP PA P + PP P G+ PA H P G
Sbjct: 290 PAAAV-PPAPTATVPAAAA-PAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMG 347
Query: 364 VHPPPSAGVHPQAPGVHPAAPAVHPQAPGVH-PPAPGMHPQA-PGVHPQPPGVHP 416
+ P +H Q P + P + Q PG P P P A P + P PP P
Sbjct: 348 IQQDP---MHHQVP-LPP-----NGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 393
Score = 29.3 bits (64), Expect = 7.9
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 249 ESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLP 281
E PPPP + + PPT P+ P PQLP
Sbjct: 152 EGSPPPP---VKVSSEPPTQATPNSVPAVPQLP 181
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.139 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,461,741
Number of Sequences: 37866
Number of extensions: 3530764
Number of successful extensions: 113836
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 1858
Number of HSP's that attempted gapping in prelim test: 16968
Number of HSP's gapped (non-prelim): 32018
length of query: 464
length of database: 18,247,518
effective HSP length: 106
effective length of query: 358
effective length of database: 14,233,722
effective search space: 5095672476
effective search space used: 5095672476
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.