Guide to the Human Genome
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Name: UTP14A Sequence: fasta or formatted (771aa) NCBI GI: 21361348
Description:

UTP14, U3 small nucleolar ribonucleoprotein, homolog A

Referenced in:

Stomach, Small Intestine, and Colon
Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         57           3
 C cysteine            0.4          3           1
 D aspartate           3.8         29           2
 E glutamate          13.7        106           4
 F phenylalanine       1.7         13           1
 G glycine             3.6         28           2
 H histidine           1.9         15           2
 I isoleucine          3.4         26           2
 K lysine             10.8         83           4
 L leucine            10.4         80           3
 M methionine          1.6         12           2
 N asparagine          3.6         28           2
 P proline             5.8         45           2
 Q glutamine           5.8         45           2
 R arginine            6.9         53           3
 S serine              7.4         57           3
 T threonine           4.0         31           2
 V valine              5.8         45           2
 W tryptophan          1.0          8           1
 Y tyrosine            0.9          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UTP14, U3 small nucleolar ribonucleoprotein, homolog... 
UTP14C                0.895   UTP14, U3 small nucleolar ribonucleoprotein, homolog...
WDR87                 0.036   NYD-SP11 protein 
NEFH                  0.029   neurofilament, heavy polypeptide 200kDa 
TCHH                  0.028   trichohyalin 
PLEC1                 0.026   plectin 1 isoform 11 
PLEC1                 0.026   plectin 1 isoform 10 
PLEC1                 0.026   plectin 1 isoform 8 
PLEC1                 0.026   plectin 1 isoform 7 
PLEC1                 0.026   plectin 1 isoform 6 
PLEC1                 0.026   plectin 1 isoform 3 
PLEC1                 0.026   plectin 1 isoform 2 
PLEC1                 0.026   plectin 1 isoform 1 
ATRX                  0.026   transcriptional regulator ATRX isoform 2 
ATRX                  0.026   transcriptional regulator ATRX isoform 1 
LOC283767             0.026   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.026   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TRDN                  0.026   triadin 
LOC727832             0.025   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.024   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC440243             0.024   PREDICTED: Putative golgin subfamily A member 6-lik...
CALD1                 0.024   caldesmon 1 isoform 1 
PPL                   0.024   periplakin 
MYH9                  0.023   myosin, heavy polypeptide 9, non-muscle 
EIF5B                 0.023   eukaryotic translation initiation factor 5B 
CROCC                 0.022   ciliary rootlet coiled-coil 
CGNL1                 0.022   cingulin-like 1 
MYH10                 0.022   myosin, heavy polypeptide 10, non-muscle 
CENPE                 0.022   centromere protein E 
CIT                   0.022   citron 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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