Guide to the Human Genome
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Name: GATAD2B Sequence: fasta or formatted (593aa) NCBI GI: 21218438
Description:

GATA zinc finger domain containing 2B

Referenced in:

DNA Methylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         48           3
 C cysteine            1.0          6           1
 D aspartate           3.2         19           2
 E glutamate           6.4         38           2
 F phenylalanine       1.2          7           1
 G glycine             5.6         33           2
 H histidine           2.2         13           2
 I isoleucine          3.9         23           2
 K lysine              6.1         36           2
 L leucine            11.1         66           2
 M methionine          3.2         19           1
 N asparagine          4.7         28           1
 P proline             8.4         50           3
 Q glutamine           8.1         48           3
 R arginine            7.1         42           2
 S serine              8.9         53           4
 T threonine           4.6         27           3
 V valine              5.1         30           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GATA zinc finger domain containing 2B 
GATAD2A               0.308   GATA zinc finger domain containing 2A 
PDLIM5                0.014   PDZ and LIM domain 5 isoform a 
MINK1                 0.014   misshapen/NIK-related kinase isoform 4 
EP400                 0.013   E1A binding protein p400 
GLTSCR1               0.013   glioma tumor suppressor candidate region gene 1 [Ho...
BCL9L                 0.013   B-cell CLL/lymphoma 9-like 
POU6F1                0.013   POU class 6 homeobox 1 
MINK1                 0.013   misshapen/NIK-related kinase isoform 2 
MINK1                 0.013   misshapen/NIK-related kinase isoform 3 
MINK1                 0.013   misshapen/NIK-related kinase isoform 1 
GPS2                  0.012   G protein pathway suppressor 2 
TNIK                  0.011   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.011   TRAF2 and NCK interacting kinase isoform 7 
CREBBP                0.011   CREB binding protein isoform b 
CREBBP                0.011   CREB binding protein isoform a 
FAM129B               0.011   hypothetical protein LOC64855 isoform 1 
FAM129B               0.011   hypothetical protein LOC64855 isoform 2 
MAST3                 0.011   microtubule associated serine/threonine kinase 3 [H...
KIF21A                0.011   kinesin family member 21A 
MKL1                  0.010   megakaryoblastic leukemia 1 protein 
TNIK                  0.010   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.010   TRAF2 and NCK interacting kinase isoform 3 
STAM2                 0.010   signal transducing adaptor molecule 2 
GLP-1                 0.010   GATA like protein-1 
EP300                 0.009   E1A binding protein p300 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 1 
PHC3                  0.009   polyhomeotic like 3 
GOLGB1                0.009   golgi autoantigen, golgin subfamily b, macrogolgin ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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