LOC440563 12687

Name: LOC440563	Sequence: fasta or formatted (293aa)		NCBI GI: 211971067
Description: heterogeneous nuclear ribonucleoprotein C-like		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 23 2 C cysteine 0.3 1 1 D aspartate 8.5 25 4 E glutamate 8.9 26 3 F phenylalanine 2.7 8 1 G glycine 8.2 24 2 H histidine 1.4 4 1 I isoleucine 3.8 11 1 K lysine 10.2 30 2 L leucine 4.8 14 2 M methionine 2.4 7 1 N asparagine 6.5 19 2 P proline 3.4 10 5 Q glutamine 4.8 14 1 R arginine 4.4 13 2 S serine 10.6 31 4 T threonine 2.0 6 1 V valine 6.8 20 2 W tryptophan 0.0 0 0 Y tyrosine 2.4 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 heterogeneous nuclear ribonucleoprotein C-like [Hom... HNRNPCL1 0.960 heterogeneous nuclear ribonucleoprotein C-like 1 [Ho... LOC649330 0.910 PREDICTED: heterogeneous nuclear ribonucleoprotein ... LOC652665 0.910 PREDICTED: similar to heterogeneous nuclear ribonuc... LOC649330 0.910 heterogeneous nuclear ribonucleoprotein C-like [Hom... HNRNPC 0.877 heterogeneous nuclear ribonucleoprotein C isoform b... HNRNPC 0.877 heterogeneous nuclear ribonucleoprotein C isoform b... HNRNPC 0.861 heterogeneous nuclear ribonucleoprotein C isoform a... HNRNPC 0.861 heterogeneous nuclear ribonucleoprotein C isoform a... RALYL 0.390 RALY RNA binding protein-like isoform 2 RALYL 0.390 RALY RNA binding protein-like isoform 2 RALYL 0.390 RALY RNA binding protein-like isoform 2 RALYL 0.390 RALY RNA binding protein-like isoform 1 RALY 0.323 RNA binding protein (autoantigenic, hnRNP-associated ... RALY 0.287 RNA binding protein (autoantigenic, hnRNP-associated... SFRS4 0.045 splicing factor, arginine/serine-rich 4 RBM14 0.045 RNA binding motif protein 14 SFRS5 0.043 splicing factor, arginine/serine-rich 5 SFRS5 0.043 splicing factor, arginine/serine-rich 5 LOC100288788 0.042 PREDICTED: similar to RNA binding motif protein, X-... LOC100288788 0.042 PREDICTED: hypothetical protein XP_002343863 HTATSF1 0.042 HIV-1 Tat specific factor 1 HTATSF1 0.042 HIV-1 Tat specific factor 1 DDX27 0.038 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 RBMXL1 0.038 RNA binding motif protein, X-linked-like 1 RBMXL1 0.038 RNA binding motif protein, X-linked-like 1 RBMXL2 0.038 testes-specific heterogenous nuclear ribonucleoprot... RBMX 0.038 RNA binding motif protein, X-linked NSBP1 0.036 nucleosomal binding protein 1 PAF1 0.036 Paf1, RNA polymerase II associated factor, homolog [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.