SFRS5 36614

Name: SFRS5	Sequence: fasta or formatted (272aa)		NCBI GI: 86991438
Description: splicing factor, arginine/serine-rich 5		Referenced in: Capping and Splicing
Other entries for this name: alt mRNA [272aa] splicing factor, arginine/serine-rich 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 13 2 C cysteine 0.7 2 1 D aspartate 5.9 16 2 E glutamate 6.2 17 1 F phenylalanine 3.7 10 2 G glycine 7.0 19 2 H histidine 1.1 3 1 I isoleucine 3.3 9 1 K lysine 6.2 17 1 L leucine 4.0 11 1 M methionine 0.7 2 1 N asparagine 3.3 9 1 P proline 3.3 9 2 Q glutamine 1.5 4 1 R arginine 20.6 56 2 S serine 18.4 50 3 T threonine 1.5 4 1 V valine 5.5 15 2 W tryptophan 0.4 1 1 Y tyrosine 1.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing factor, arginine/serine-rich 5 SFRS5 1.000 splicing factor, arginine/serine-rich 5 SFRS6 0.557 arginine/serine-rich splicing factor 6 SFRS4 0.538 splicing factor, arginine/serine-rich 4 SFRS1 0.283 splicing factor, arginine/serine-rich 1 isoform 1 [Ho... SFRS1 0.213 splicing factor, arginine/serine-rich 1 isoform 2 [... SFRS9 0.192 splicing factor, arginine/serine-rich 9 SFRS7 0.172 splicing factor, arginine/serine-rich 7 SFRS2 0.136 splicing factor, arginine/serine-rich 2 SFRS2B 0.132 splicing factor, arginine/serine-rich 2B FUSIP1 0.126 FUS interacting protein (serine-arginine rich) 1 iso... SFRS3 0.121 splicing factor, arginine/serine-rich 3 SRrp35 0.119 serine-arginine repressor protein DDX46 0.109 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 CHERP 0.107 calcium homeostasis endoplasmic reticulum protein [... ZRANB2 0.101 zinc finger protein 265 isoform 1 ZRANB2 0.101 zinc finger protein 265 isoform 2 RSRC2 0.101 arginine/serine-rich coiled-coil 2 isoform b RSRC2 0.101 arginine/serine-rich coiled-coil 2 isoform a PRPF38B 0.099 PRP38 pre-mRNA processing factor 38 (yeast) domain ... GPATCH8 0.097 G patch domain containing 8 SFRS11 0.097 splicing factor, arginine/serine-rich 11 RBM28 0.091 RNA binding motif protein 28 LOC100170229 0.089 hypothetical protein LOC100170229 SFRS12 0.087 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.087 splicing factor, arginine/serine-rich 12 isoform b [... SFRS16 0.087 splicing factor, arginine/serine-rich 16 NKTR 0.085 natural killer-tumor recognition sequence TRA2B 0.083 splicing factor, arginine/serine-rich 10 RBM39 0.083 RNA binding motif protein 39 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.