HNRNPC 1961

Name: HNRNPC	Sequence: fasta or formatted (293aa)		NCBI GI: 117190254
Description: heterogeneous nuclear ribonucleoprotein C isoform b		Referenced in: hnRNP
Other entries for this name: alt prot [306aa] heterogeneous nuclear ribonucleoprotein C isoform a alt mRNA [293aa] heterogeneous nuclear ribonucleoprotein C isoform b alt prot [306aa] heterogeneous nuclear ribonucleoprotein C isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 22 2 C cysteine 0.3 1 1 D aspartate 10.6 31 4 E glutamate 9.2 27 3 F phenylalanine 2.4 7 1 G glycine 7.8 23 2 H histidine 0.3 1 1 I isoleucine 3.4 10 1 K lysine 9.9 29 2 L leucine 5.1 15 2 M methionine 2.4 7 1 N asparagine 5.5 16 1 P proline 3.1 9 5 Q glutamine 4.1 12 1 R arginine 6.1 18 2 S serine 10.2 30 4 T threonine 2.0 6 1 V valine 7.2 21 2 W tryptophan 0.0 0 0 Y tyrosine 2.7 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 heterogeneous nuclear ribonucleoprotein C isoform b... HNRNPC 1.000 heterogeneous nuclear ribonucleoprotein C isoform b... HNRNPC 0.984 heterogeneous nuclear ribonucleoprotein C isoform a... HNRNPC 0.984 heterogeneous nuclear ribonucleoprotein C isoform a... HNRNPCL1 0.904 heterogeneous nuclear ribonucleoprotein C-like 1 [Ho... LOC440563 0.882 heterogeneous nuclear ribonucleoprotein C-like [Hom... LOC649330 0.880 PREDICTED: heterogeneous nuclear ribonucleoprotein ... LOC652665 0.880 PREDICTED: similar to heterogeneous nuclear ribonuc... LOC649330 0.880 heterogeneous nuclear ribonucleoprotein C-like [Hom... RALYL 0.441 RALY RNA binding protein-like isoform 2 RALYL 0.441 RALY RNA binding protein-like isoform 2 RALYL 0.441 RALY RNA binding protein-like isoform 2 RALYL 0.441 RALY RNA binding protein-like isoform 1 RALY 0.358 RNA binding protein (autoantigenic, hnRNP-associated ... RALY 0.319 RNA binding protein (autoantigenic, hnRNP-associated... RBM14 0.058 RNA binding motif protein 14 FUSIP1 0.053 FUS interacting protein (serine-arginine rich) 1 iso... LOC100288788 0.049 PREDICTED: similar to RNA binding motif protein, X-... LOC100288788 0.049 PREDICTED: hypothetical protein XP_002343863 HTATSF1 0.047 HIV-1 Tat specific factor 1 HTATSF1 0.047 HIV-1 Tat specific factor 1 RBMXL1 0.047 RNA binding motif protein, X-linked-like 1 RBMXL1 0.047 RNA binding motif protein, X-linked-like 1 CYLC2 0.047 cylicin 2 SFRS6 0.047 arginine/serine-rich splicing factor 6 RBMX 0.047 RNA binding motif protein, X-linked SFRS4 0.045 splicing factor, arginine/serine-rich 4 RBMXL2 0.045 testes-specific heterogenous nuclear ribonucleoprot... NSBP1 0.045 nucleosomal binding protein 1 NEFM 0.044 neurofilament, medium polypeptide 150kDa isoform 1 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.