Guide to the Human Genome
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Name: ZNF34 Sequence: fasta or formatted (560aa) NCBI GI: 157954634
Description:

zinc finger protein 34

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         21           2
 C cysteine            4.8         27           1
 D aspartate           3.0         17           1
 E glutamate           8.6         48           2
 F phenylalanine       3.4         19           1
 G glycine             7.5         42           2
 H histidine           6.1         34           2
 I isoleucine          3.8         21           1
 K lysine              8.2         46           2
 L leucine             7.5         42           4
 M methionine          1.2          7           1
 N asparagine          3.4         19           2
 P proline             5.0         28           2
 Q glutamine           5.4         30           1
 R arginine            7.3         41           2
 S serine              8.2         46           2
 T threonine           5.2         29           1
 V valine              3.8         21           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 34 
ZNF135                0.434   zinc finger protein 135 
DKFZp686E2433         0.427   hypothetical protein LOC345462 
ZNF568                0.422   zinc finger protein 568 
ZNF184                0.421   zinc finger protein 184 
ZNF300                0.416   zinc finger protein 300 
ZNF251                0.413   zinc finger protein 251 
ZNF583                0.412   zinc finger protein 583 
ZNF583                0.412   zinc finger protein 583 
ZNF583                0.412   zinc finger protein 583 
ZNF189                0.411   zinc finger protein 189 isoform 1 
ZNF7                  0.409   zinc finger protein 7 
ZNF420                0.403   zinc finger protein 420 
ZNF167                0.403   zinc finger protein 167 isoform 1 
ZNF454                0.403   zinc finger protein 454 
ZNF543                0.400   zinc finger protein 543 
ZNF30                 0.399   zinc finger protein 30 isoform a 
ZNF30                 0.399   zinc finger protein 30 isoform a 
ZNF30                 0.399   zinc finger protein 30 isoform b 
ZNF480                0.399   zinc finger protein 480 
ZNF287                0.396   zinc finger protein 287 
ZNF16                 0.396   zinc finger protein 16 
ZNF16                 0.396   zinc finger protein 16 
ZNF570                0.396   zinc finger protein 570 
ZNF502                0.395   zinc finger protein 502 
ZNF502                0.395   zinc finger protein 502 
ZNF502                0.395   zinc finger protein 502 
ZNF502                0.395   zinc finger protein 502 
ZNF852                0.392   PREDICTED: zinc finger protein 852 
ZNF852                0.392   PREDICTED: zinc finger protein 852 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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