Guide to the Human Genome
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Name: UNC5D Sequence: fasta or formatted (953aa) NCBI GI: 209977117
Description:

unc-5 homolog D

Referenced in:

Netrins and Laminins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         62           3
 C cysteine            3.9         37           1
 D aspartate           4.4         42           2
 E glutamate           7.0         67           2
 F phenylalanine       3.7         35           2
 G glycine             6.7         64           5
 H histidine           2.8         27           1
 I isoleucine          5.1         49           2
 K lysine              3.9         37           2
 L leucine             8.4         80           3
 M methionine          1.7         16           1
 N asparagine          4.6         44           2
 P proline             5.9         56           3
 Q glutamine           4.7         45           2
 R arginine            5.2         50           2
 S serine              9.0         86           2
 T threonine           6.0         57           3
 V valine              6.1         58           3
 W tryptophan          2.2         21           1
 Y tyrosine            2.1         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   unc-5 homolog D 
UNC5B                 0.502   unc-5 homolog B 
UNC5C                 0.464   unc5C 
UNC5A                 0.318   netrin receptor Unc5h1 
HMCN1                 0.056   hemicentin 1 
THBS2                 0.044   thrombospondin 2 precursor 
SEMA5A                0.044   semaphorin 5A 
SEMA5B                0.041   semaphorin 5B isoform 1 
BAI1                  0.039   brain-specific angiogenesis inhibitor 1 precursor [...
THBS1                 0.038   thrombospondin 1 precursor 
BAI3                  0.037   brain-specific angiogenesis inhibitor 3 
ROBO1                 0.036   roundabout 1 isoform d 
ROBO1                 0.036   roundabout 1 isoform c 
ROBO1                 0.036   roundabout 1 isoform b 
LOC642132             0.036   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.036   PREDICTED: similar to roundabout 1 isoform 2 
ROBO1                 0.036   roundabout 1 isoform a 
ROBO2                 0.036   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.036   roundabout, axon guidance receptor, homolog 2 isofor...
UNC5CL                0.036   unc-5 homolog C-like 
CFP                   0.035   complement factor properdin precursor 
CFP                   0.035   complement factor properdin precursor 
ROBO3                 0.032   roundabout, axon guidance receptor, homolog 3 
SSPO                  0.031   SCO-spondin 
BAI2                  0.030   brain-specific angiogenesis inhibitor 2 
ROBO4                 0.023   roundabout homolog 4, magic roundabout 
TJP1                  0.020   tight junction protein 1 isoform b 
TJP1                  0.020   tight junction protein 1 isoform a 
ADAMTS16              0.020   ADAM metallopeptidase with thrombospondin type 1 mo...
C6                    0.020   complement component 6 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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