THBS1 27462

Name: THBS1	Sequence: fasta or formatted (1170aa)		NCBI GI: 40317626
Description: thrombospondin 1 precursor		Referenced in: Additional Genes in Development Platelets and Megakaryocytes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 52 2 C cysteine 6.0 70 2 D aspartate 11.2 131 5 E glutamate 4.4 51 2 F phenylalanine 3.0 35 2 G glycine 9.0 105 3 H histidine 2.3 27 1 I isoleucine 3.8 45 2 K lysine 4.7 55 2 L leucine 5.5 64 3 M methionine 1.2 14 1 N asparagine 6.9 81 2 P proline 6.0 70 2 Q glutamine 4.3 50 2 R arginine 5.1 60 2 S serine 6.3 74 3 T threonine 5.2 61 2 V valine 6.2 72 2 W tryptophan 1.9 22 1 Y tyrosine 2.6 31 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thrombospondin 1 precursor THBS2 0.638 thrombospondin 2 precursor COMP 0.290 cartilage oligomeric matrix protein precursor THBS3 0.284 thrombospondin 3 precursor THBS4 0.277 thrombospondin 4 precursor HMCN1 0.066 hemicentin 1 BAI1 0.053 brain-specific angiogenesis inhibitor 1 precursor [... CFP 0.052 complement factor properdin precursor CFP 0.052 complement factor properdin precursor BAI3 0.048 brain-specific angiogenesis inhibitor 3 SSPO 0.047 SCO-spondin BAI2 0.046 brain-specific angiogenesis inhibitor 2 SEMA5B 0.044 semaphorin 5B isoform 1 SEMA5A 0.043 semaphorin 5A UNC5B 0.032 unc-5 homolog B NELL1 0.031 nel-like 1 isoform 1 precursor UNC5C 0.030 unc5C UNC5D 0.030 unc-5 homolog D SPON1 0.029 spondin 1, extracellular matrix protein NELL1 0.027 nel-like 1 isoform 2 precursor ADAMTS4 0.025 ADAM metallopeptidase with thrombospondin type 1 mo... ADAMTS12 0.024 ADAM metallopeptidase with thrombospondin type 1 mot... ADAMTS10 0.023 ADAM metallopeptidase with thrombospondin type 1 mot... KCP 0.023 cysteine rich BMP regulator 2 isoform 1 NOTCH3 0.023 Notch homolog 3 ADAMTS8 0.023 ADAM metallopeptidase with thrombospondin type 1 mo... ADAMTS9 0.023 ADAM metallopeptidase with thrombospondin type 1 mot... ADAMTSL4 0.022 thrombospondin repeat containing 1 isoform 1 ADAMTSL2 0.022 ADAMTS-like 2 precursor ADAMTSL2 0.022 ADAMTS-like 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.