Search of human proteins with 205277349

Search of human proteins with 205277349

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|205277349 family with sequence similarity 176, member A
[Homo sapiens]
         (152 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14149865 family with sequence similarity 176, member A [Homo ...   302   6e-83
gi|205277349 family with sequence similarity 176, member A [Homo...   302   6e-83
gi|8922567 hypothetical protein LOC55194 [Homo sapiens]               121   3e-28
gi|21361800 hypothetical protein LOC59271 [Homo sapiens]               96   9e-21
gi|75677335 digestive-organ expansion factor homolog [Homo sapiens]    33   0.072
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]    32   0.27 
gi|42560244 peptidylprolyl isomerase G [Homo sapiens]                  32   0.27 
gi|7662164 hypothetical protein LOC9764 [Homo sapiens]                 32   0.27 
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    31   0.36 
gi|40807452 peroxisome proliferator-activated receptor gamma, co...    31   0.46 
gi|4505101 microtubule-associated protein 7 [Homo sapiens]             30   0.61 
gi|48255931 hepatoma-derived growth factor-related protein 2 iso...    30   0.61 
gi|14249158 hepatoma-derived growth factor-related protein 2 iso...    30   0.61 
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]        30   0.79 
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]    30   0.79 
gi|8922563 DnaJ (Hsp40) homolog, subfamily C, member 17 [Homo sa...    30   0.79 
gi|145580615 KRI1 homolog [Homo sapiens]                               30   1.0  
gi|45007002 longevity assurance homolog 6 [Homo sapiens]               30   1.0  
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                29   1.8  
gi|254028242 fibroblast growth factor receptor 3 isoform 3 precu...    29   1.8  
gi|13112048 fibroblast growth factor receptor 3 isoform 2 precur...    29   1.8  
gi|4503711 fibroblast growth factor receptor 3 isoform 1 precurs...    29   1.8  
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo...    29   1.8  
gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo...    29   1.8  
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ...    29   1.8  
gi|148746195 trichohyalin [Homo sapiens]                               29   1.8  
gi|221136785 upstream binding transcription factor, RNA polymera...    28   2.3  
gi|157837985 kazrin isoform E [Homo sapiens]                           28   2.3  
gi|65301128 kazrin isoform C [Homo sapiens]                            28   2.3  
gi|65301130 kazrin isoform B [Homo sapiens]                            28   2.3  

>gi|14149865 family with sequence similarity 176, member A [Homo
           sapiens]
          Length = 152

 Score =  302 bits (774), Expect = 6e-83
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MRLPLSHSPEHVEMALLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCH 60
           MRLPLSHSPEHVEMALLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCH
Sbjct: 1   MRLPLSHSPEHVEMALLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCH 60

Query: 61  TDCRRRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELER 120
           TDCRRRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELER
Sbjct: 61  TDCRRRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELER 120

Query: 121 AQRLEERERIIREIWMNGQPEVPGTRSLNRYY 152
           AQRLEERERIIREIWMNGQPEVPGTRSLNRYY
Sbjct: 121 AQRLEERERIIREIWMNGQPEVPGTRSLNRYY 152


>gi|205277349 family with sequence similarity 176, member A [Homo
           sapiens]
          Length = 152

 Score =  302 bits (774), Expect = 6e-83
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MRLPLSHSPEHVEMALLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCH 60
           MRLPLSHSPEHVEMALLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCH
Sbjct: 1   MRLPLSHSPEHVEMALLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCH 60

Query: 61  TDCRRRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELER 120
           TDCRRRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELER
Sbjct: 61  TDCRRRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELER 120

Query: 121 AQRLEERERIIREIWMNGQPEVPGTRSLNRYY 152
           AQRLEERERIIREIWMNGQPEVPGTRSLNRYY
Sbjct: 121 AQRLEERERIIREIWMNGQPEVPGTRSLNRYY 152


>gi|8922567 hypothetical protein LOC55194 [Homo sapiens]
          Length = 165

 Score =  121 bits (303), Expect = 3e-28
 Identities = 72/143 (50%), Positives = 87/143 (60%), Gaps = 7/143 (4%)

Query: 13  EMALLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCHTDCRRRPGKKFL 72
           +M LLSN LAAY+ +  NPE   LYFV GVC GL+LTL  LVI IS     R R   +  
Sbjct: 7   DMELLSNSLAAYAHIRANPESFGLYFVLGVCFGLLLTLCLLVISISWAPRPRPRGPAQRR 66

Query: 73  QDRESSSDSSDSEDGSEDTVSDL-------SVRRHRRFERTLNKNVFTSAEELERAQRLE 125
             R S+ +  D ++  EDTV+ L               +  LN NVFTSAEELERAQRLE
Sbjct: 67  DPRSSTLEPEDDDEDEEDTVTRLGPDDTLPGPELSAEPDGPLNVNVFTSAEELERAQRLE 126

Query: 126 ERERIIREIWMNGQPEVPGTRSL 148
           ERERI+REIW  GQP++ GT +L
Sbjct: 127 ERERILREIWRTGQPDLLGTGTL 149


>gi|21361800 hypothetical protein LOC59271 [Homo sapiens]
          Length = 441

 Score = 96.3 bits (238), Expect = 9e-21
 Identities = 64/144 (44%), Positives = 89/144 (61%), Gaps = 13/144 (9%)

Query: 16  LLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCHTDCR-RRPGKKFL-- 72
           L+SN LAA++++  +PERAAL FVS VCIGL LTL ALVIR SC  D R  + G++ L  
Sbjct: 304 LVSNSLAAFAYIRAHPERAALLFVSSVCIGLALTLCALVIRESCAKDFRDLQLGREQLVP 363

Query: 73  ---QDRESSSDSSDSEDGSE-DTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEERE 128
              +  E S D  + ED SE D   +LS      F RT +  +++S E  E A+R+E RE
Sbjct: 364 GSDKVEEDSEDEEEEEDPSESDFPGELS-----GFCRT-SYPIYSSIEAAELAERIERRE 417

Query: 129 RIIREIWMNGQPEVPGTRSLNRYY 152
           +II+EIWMN   +    R++ ++Y
Sbjct: 418 QIIQEIWMNSGLDTSLPRNMGQFY 441


>gi|75677335 digestive-organ expansion factor homolog [Homo sapiens]
          Length = 756

 Score = 33.5 bits (75), Expect = 0.072
 Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 65  RRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRL 124
           R+  K  +     SSDSSDSE  SE     +S   + R   TL KNV  S EE E  +  
Sbjct: 39  RKEAKPQICQLSESSDSSDSESDSESEPQQVS--GYHRLLATL-KNV--SEEEEEDEEEE 93

Query: 125 EERERIIREIWMNGQ 139
           EE + I+ +  MN +
Sbjct: 94  EEEDSIVDDAEMNDE 108


>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
          Length = 1233

 Score = 31.6 bits (70), Expect = 0.27
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 10/75 (13%)

Query: 69  KKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQR----- 123
           +K  Q+ E   +      G + T+ +  V+++ R +   +K   T A+ELE+  R     
Sbjct: 344 EKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKAD 403

Query: 124 -----LEERERIIRE 133
                LEER+++  E
Sbjct: 404 QDRLDLEERKKVETE 418


>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
          Length = 754

 Score = 31.6 bits (70), Expect = 0.27
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 74  DRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEERERIIRE 133
           D +SSSDSSDSE  +E+  S    ++HR+  R   K      +  + A    E E +  +
Sbjct: 209 DSQSSSDSSDSESATEEK-SKKRKKKHRKNSRKHKKEKKKRKKSKKSASSESEAENLEAQ 267

Query: 134 IWMNGQPE----VPGTRSLNR 150
                +PE    +P  R L R
Sbjct: 268 PQSTVRPEEIPPIPENRFLMR 288


>gi|7662164 hypothetical protein LOC9764 [Homo sapiens]
          Length = 411

 Score = 31.6 bits (70), Expect = 0.27
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 73  QDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQR 123
           QDR SSS+ S S + S ++  D      R F R   + +F+  E+L++ ++
Sbjct: 68  QDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEK 118


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
           sapiens]
          Length = 2881

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 68  GKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEER 127
           GKK  +  ESS + SD+E   + T+ D   ++ RR  R + +  +  AE++E  Q  EE 
Sbjct: 602 GKKQKRKNESSDEISDAEQMPQHTLKDQDSQK-RRSNRQIKRKKY--AEDIEGKQS-EEE 657

Query: 128 ERIIREIWMNGQPEVPGTRSLNRY 151
            +   +I  N  P +PG + L  +
Sbjct: 658 VKGSMKIKKNSAP-LPGEQPLQLF 680


>gi|40807452 peroxisome proliferator-activated receptor gamma,
            coactivator-related 1 [Homo sapiens]
          Length = 1664

 Score = 30.8 bits (68), Expect = 0.46
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 56   RISCHTDCRRRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSA 115
            R SC +  R R          SSS SS S   S       S R  RR +R    + + S 
Sbjct: 1467 RSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPR--RRSDRRRRYSSYRSH 1524

Query: 116  EELERAQRLEERERIIREIWMNGQPEVPG--TRS 147
            +  +R QR+ ++ER I E  +    ++PG  TRS
Sbjct: 1525 DHYQR-QRVLQKERAIEERRVVFIGKIPGRMTRS 1557


>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
          Length = 749

 Score = 30.4 bits (67), Expect = 0.61
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 66  RPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLE 125
           R  ++ L  R +   ++  E+ S    ++ +  +  + +R   +      EE ERAQR +
Sbjct: 509 RQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQRQAEERALREREEAERAQRQK 568

Query: 126 ERERIIRE 133
           E E  +RE
Sbjct: 569 EEEARVRE 576


>gi|48255931 hepatoma-derived growth factor-related protein 2
           isoform 1 [Homo sapiens]
          Length = 671

 Score = 30.4 bits (67), Expect = 0.61
 Identities = 19/62 (30%), Positives = 28/62 (45%)

Query: 68  GKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEER 127
           G+K   +R  SS SSDS+    D +S+   R   R      +      EEL R +  E+ 
Sbjct: 289 GRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKE 348

Query: 128 ER 129
           E+
Sbjct: 349 EK 350


>gi|14249158 hepatoma-derived growth factor-related protein 2
           isoform 2 [Homo sapiens]
          Length = 670

 Score = 30.4 bits (67), Expect = 0.61
 Identities = 19/62 (30%), Positives = 28/62 (45%)

Query: 68  GKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEER 127
           G+K   +R  SS SSDS+    D +S+   R   R      +      EEL R +  E+ 
Sbjct: 289 GRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKE 348

Query: 128 ER 129
           E+
Sbjct: 349 EK 350


>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
          Length = 4857

 Score = 30.0 bits (66), Expect = 0.79
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 65  RRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFE----RTLNKNVFTSAEELER 120
           RRP   +L+D  S SD    E  S+D + D     H R +     T  K     + ++  
Sbjct: 450 RRPTLAWLEDSSSCSDIPKLEGDSDDLLEDSDSEEHSRSDSVTGHTSQKEAMEVSLDITA 509

Query: 121 AQRLEERERIIREIWMN 137
              L++ E++  EI  N
Sbjct: 510 LSILQQPEKLQWEIVAN 526


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score = 30.0 bits (66), Expect = 0.79
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 69  KKFLQDRESSSDSSDSEDGS-EDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQR 123
           +K+ + R S   SSDSE  S + T S     +  + ERT NK      EE  +++R
Sbjct: 796 RKYSESRSSLDYSSDSEQSSVQATQSAQEKEKQGQMERTHNKQEKNRGEEKSKSER 851


>gi|8922563 DnaJ (Hsp40) homolog, subfamily C, member 17 [Homo
           sapiens]
          Length = 304

 Score = 30.0 bits (66), Expect = 0.79
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 13/72 (18%)

Query: 62  DCRRRPGKKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERA 121
           D +R+  K  L+ RE  + + +SE+  E            R  RTL + +    EE  R 
Sbjct: 90  DEKRKKVKLDLEARERQAQAQESEEEEES-----------RSTRTLEQEIERLREEGSR- 137

Query: 122 QRLEERERIIRE 133
            +LEE++R+IRE
Sbjct: 138 -QLEEQQRLIRE 148


>gi|145580615 KRI1 homolog [Homo sapiens]
          Length = 709

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 74  DRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLN 108
           DR+SSSDSS   D S++ V +   ++ R F +TL+
Sbjct: 44  DRDSSSDSSSESDSSDERV-EFDPQQERDFYKTLS 77


>gi|45007002 longevity assurance homolog 6 [Homo sapiens]
          Length = 384

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 45  GLVLTLAALVIRISCHTDCRRRPGKKFLQDRESSSDSSDSE 85
           GL    + L+++I+C    R +  K    D ESSSD  DSE
Sbjct: 313 GLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSE 353


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 18/57 (31%), Positives = 23/57 (40%)

Query: 73  QDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEERER 129
           +DRE SSD +     S +   D    R R  ER   +      E     +R  ERER
Sbjct: 369 RDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERER 425


>gi|254028242 fibroblast growth factor receptor 3 isoform 3
           precursor [Homo sapiens]
          Length = 808

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 31  PERAALYFVSGVCIGLVLTLAALVIRISCHTDCRRRPGKKFLQDRESSSDSSDSEDGSED 90
           P+R  +   S    G       L  R+ CH   R       + D  SS D  D ED +ED
Sbjct: 91  PQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVR-------VTDAPSSGDDEDGEDEAED 143

Query: 91  TVSDLSVRRHRRFER 105
           T  D       R ER
Sbjct: 144 TGVDTGAPYWTRPER 158


>gi|13112048 fibroblast growth factor receptor 3 isoform 2 precursor
           [Homo sapiens]
          Length = 694

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 31  PERAALYFVSGVCIGLVLTLAALVIRISCHTDCRRRPGKKFLQDRESSSDSSDSEDGSED 90
           P+R  +   S    G       L  R+ CH   R       + D  SS D  D ED +ED
Sbjct: 91  PQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVR-------VTDAPSSGDDEDGEDEAED 143

Query: 91  TVSDLSVRRHRRFER 105
           T  D       R ER
Sbjct: 144 TGVDTGAPYWTRPER 158


>gi|4503711 fibroblast growth factor receptor 3 isoform 1 precursor
           [Homo sapiens]
          Length = 806

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 31  PERAALYFVSGVCIGLVLTLAALVIRISCHTDCRRRPGKKFLQDRESSSDSSDSEDGSED 90
           P+R  +   S    G       L  R+ CH   R       + D  SS D  D ED +ED
Sbjct: 91  PQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVR-------VTDAPSSGDDEDGEDEAED 143

Query: 91  TVSDLSVRRHRRFER 105
           T  D       R ER
Sbjct: 144 TGVDTGAPYWTRPER 158


>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
           sapiens]
          Length = 530

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 65  RRPGKKFLQDRESS------SDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEEL 118
           ++ GKK ++ +  +      + +SDSE+  +D   +   +  R F+    +N+     E 
Sbjct: 250 KKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQHEK 309

Query: 119 ERAQRLEERE 128
           E A R  ++E
Sbjct: 310 EAADRKRKQE 319


>gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo
           sapiens]
          Length = 333

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 65  RRPGKKFLQDRESS------SDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEEL 118
           ++ GKK ++ +  +      + +SDSE+  +D   +   +  R F+    +N+     E 
Sbjct: 250 KKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQHEK 309

Query: 119 ERAQRLEERE 128
           E A R  ++E
Sbjct: 310 EAADRKRKQE 319


>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
           sapiens]
          Length = 530

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 65  RRPGKKFLQDRESS------SDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEEL 118
           ++ GKK ++ +  +      + +SDSE+  +D   +   +  R F+    +N+     E 
Sbjct: 250 KKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQHEK 309

Query: 119 ERAQRLEERE 128
           E A R  ++E
Sbjct: 310 EAADRKRKQE 319


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 69  KKFLQDRESSSDSSDSEDGSEDTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEERE 128
           +  LQDR    D    E        +   RR ++ +    + +    E+ E+ +RLE+R+
Sbjct: 107 ESLLQDRRQEEDQRRFEPRDRQLEEEPGQRRRQKRQEQ-ERELAEGEEQSEKQERLEQRD 165

Query: 129 RIIR--EIWMNGQ 139
           R  R  E+W   Q
Sbjct: 166 RQRRDEELWRQRQ 178


>gi|221136785 upstream binding transcription factor, RNA polymerase
           I-like 1 [Homo sapiens]
          Length = 393

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 49  TLAALVIRISCHTDCRRRPGKKFLQDRESSSDSSDSEDGSE 89
           T ++  I ++CH        +K  +++E SS+SSD   G E
Sbjct: 348 TDSSQTIWVNCHVSMEPEENRKKDREKEESSNSSDCSSGEE 388


>gi|157837985 kazrin isoform E [Homo sapiens]
          Length = 775

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 11/63 (17%)

Query: 79  SDSSDSEDGSEDTVSDLSVRRHRR-----------FERTLNKNVFTSAEELERAQRLEER 127
           SD+S +E     T SD++  RHR             ++ L+  +  S E+LE  +R +++
Sbjct: 321 SDASAAEGDRSSTPSDINSPRHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKK 380

Query: 128 ERI 130
           E++
Sbjct: 381 EKM 383


>gi|65301128 kazrin isoform C [Homo sapiens]
          Length = 327

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 11/63 (17%)

Query: 79  SDSSDSEDGSEDTVSDLSVRRHRR-----------FERTLNKNVFTSAEELERAQRLEER 127
           SD+S +E     T SD++  RHR             ++ L+  +  S E+LE  +R +++
Sbjct: 227 SDASAAEGDRSSTPSDINSPRHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKK 286

Query: 128 ERI 130
           E++
Sbjct: 287 EKM 289


>gi|65301130 kazrin isoform B [Homo sapiens]
          Length = 415

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 11/63 (17%)

Query: 79  SDSSDSEDGSEDTVSDLSVRRHRR-----------FERTLNKNVFTSAEELERAQRLEER 127
           SD+S +E     T SD++  RHR             ++ L+  +  S E+LE  +R +++
Sbjct: 315 SDASAAEGDRSSTPSDINSPRHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKK 374

Query: 128 ERI 130
           E++
Sbjct: 375 EKM 377


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,639,759
Number of Sequences: 37866
Number of extensions: 215420
Number of successful extensions: 1678
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1479
Number of HSP's gapped (non-prelim): 243
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.