Guide to the Human Genome
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Name: KIAA0513 Sequence: fasta or formatted (411aa) NCBI GI: 7662164
Description:

hypothetical protein LOC9764

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         26           2
 C cysteine            1.9          8           1
 D aspartate           6.1         25           2
 E glutamate          11.7         48           4
 F phenylalanine       5.1         21           2
 G glycine             6.6         27           2
 H histidine           2.2          9           1
 I isoleucine          2.4         10           1
 K lysine              7.1         29           2
 L leucine             7.5         31           2
 M methionine          2.2          9           1
 N asparagine          4.4         18           1
 P proline             5.1         21           3
 Q glutamine           4.1         17           2
 R arginine            5.4         22           2
 S serine              8.8         36           3
 T threonine           5.8         24           2
 V valine              3.2         13           2
 W tryptophan          1.5          6           1
 Y tyrosine            2.7         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9764 
MADD                  0.015   MAP-kinase activating death domain-containing prote...
MADD                  0.015   MAP-kinase activating death domain-containing prote...
MADD                  0.015   MAP-kinase activating death domain-containing prote...
MADD                  0.015   MAP-kinase activating death domain-containing prote...
MADD                  0.015   MAP-kinase activating death domain-containing prote...
MADD                  0.015   MAP-kinase activating death domain-containing prote...
MADD                  0.015   MAP-kinase activating death domain-containing prote...
MADD                  0.015   MAP-kinase activating death domain-containing prote...
TNRC18                0.015   trinucleotide repeat containing 18 
DSPP                  0.015   dentin sialophosphoprotein preproprotein 
ZCCHC10               0.013   zinc finger, CCHC domain containing 10 
SBF1                  0.012   SET binding factor 1 
DMP1                  0.012   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.012   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
FAM83H                0.011   FAM83H 
BOD1L                 0.011   biorientation of chromosomes in cell division 1-like...
WDR43                 0.011   WD repeat domain 43 
CHD9                  0.011   chromodomain helicase DNA binding protein 9 
S100PBP               0.010   S100P binding protein isoform b 
S100PBP               0.010   S100P binding protein isoform a 
SETD1A                0.010   SET domain containing 1A 
AFF1                  0.010   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
GLTSCR1               0.010   glioma tumor suppressor candidate region gene 1 [Ho...
FNBP4                 0.010   formin binding protein 4 
NAF1                  0.010   nuclear assembly factor 1 homolog isoform b 
NAF1                  0.010   nuclear assembly factor 1 homolog isoform a 
AP3B2                 0.009   adaptor-related protein complex 3, beta 2 subunit [H...
SEC16A                0.009   SEC16 homolog A 
SUPT16H               0.009   chromatin-specific transcription elongation factor la...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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