Guide to the Human Genome
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Name: C21orf63 Sequence: fasta or formatted (441aa) NCBI GI: 21361800
Description:

hypothetical protein LOC59271

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         27           2
 C cysteine            5.0         22           1
 D aspartate           5.0         22           1
 E glutamate           6.8         30           5
 F phenylalanine       3.6         16           1
 G glycine             5.2         23           1
 H histidine           2.0          9           2
 I isoleucine          4.5         20           2
 K lysine              5.2         23           2
 L leucine            11.1         49           2
 M methionine          0.9          4           1
 N asparagine          3.4         15           2
 P proline             6.1         27           2
 Q glutamine           5.9         26           1
 R arginine            6.1         27           2
 S serine              9.1         40           2
 T threonine           4.3         19           2
 V valine              5.2         23           1
 W tryptophan          0.2          1           1
 Y tyrosine            4.1         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC59271 
FAM176A               0.081   family with sequence similarity 176, member A 
FAM176A               0.081   family with sequence similarity 176, member A [Homo...
FAM176B               0.067   hypothetical protein LOC55194 
LPHN1                 0.044   latrophilin 1 isoform 1 precursor 
LPHN3                 0.044   latrophilin 3 precursor 
LPHN2                 0.044   latrophilin 2 precursor 
LPHN1                 0.043   latrophilin 1 isoform 2 precursor 
PKD1L2                0.027   polycystin 1-like 2 isoform c 
PKD1L2                0.027   polycystin 1-like 2 isoform a 
CHD7                  0.013   chromodomain helicase DNA binding protein 7 
ZEB1                  0.011   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.011   zinc finger E-box binding homeobox 1 isoform b [Hom...
VPRBP                 0.010   HIV-1 Vpr binding protein 
BCL11A                0.010   B-cell CLL/lymphoma 11A isoform 1 
BCL11A                0.010   B-cell CLL/lymphoma 11A isoform 2 
PRDM2                 0.009   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.009   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.009   retinoblastoma protein-binding zinc finger protein i...
PLEKHG5               0.009   pleckstrin homology domain containing family G membe...
PLEKHG5               0.009   pleckstrin homology domain containing family G memb...
PLEKHG5               0.009   pleckstrin homology domain containing family G memb...
PLEKHG5               0.009   pleckstrin homology domain containing family G memb...
PLEKHG5               0.009   pleckstrin homology domain containing family G memb...
MAPK8IP2              0.009   mitogen-activated protein kinase 8 interacting protei...
MAPK8IP2              0.009   mitogen-activated protein kinase 8 interacting protei...
IL27                  0.009   interleukin 27 
HUWE1                 0.008   HECT, UBA and WWE domain containing 1 
CACNA1F               0.008   calcium channel, voltage-dependent, L type, alpha 1F...
CCDC82                0.008   coiled-coil domain containing 82 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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