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Search of human proteins with 20336267
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20336267 ADP-ribosylation factor binding protein 3 isoform
long [Homo sapiens]
(723 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 1439 0.0
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 1355 0.0
gi|9558729 golgi associated, gamma adaptin ear containing, ARF b... 635 0.0
gi|48527952 golgi associated, gamma adaptin ear containing, ARF ... 382 e-106
gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens] 346 4e-95
gi|239758145 PREDICTED: similar to ADP-ribosylation factor bindi... 141 2e-33
gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens] 123 5e-28
gi|209180457 target of myb1 isoform 2 [Homo sapiens] 108 1e-23
gi|4885637 target of myb1 isoform 1 [Homo sapiens] 108 1e-23
gi|209180448 target of myb1 isoform 3 [Homo sapiens] 96 9e-20
gi|48527954 golgi associated, gamma adaptin ear containing, ARF ... 95 3e-19
gi|191252812 target of myb1-like 1 [Homo sapiens] 94 4e-19
gi|209180450 target of myb1 isoform 4 [Homo sapiens] 82 2e-15
gi|71773010 adaptor-related protein complex 1, gamma 1 subunit i... 78 3e-14
gi|71772942 adaptor-related protein complex 1, gamma 1 subunit i... 78 3e-14
gi|188219625 signal transducing adaptor molecule 2 [Homo sapiens] 76 1e-13
gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens] 75 2e-13
gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [H... 72 1e-12
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 71 3e-12
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 69 2e-11
gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens] 67 8e-11
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 2e-08
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 57 5e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 54 7e-07
gi|54860079 nadrin isoform 1 [Homo sapiens] 54 7e-07
gi|163965366 nascent polypeptide-associated complex alpha subuni... 53 9e-07
gi|18079216 CASK interacting protein 1 [Homo sapiens] 53 1e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 2e-06
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 52 3e-06
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 51 4e-06
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 1439 bits (3726), Expect = 0.0
Identities = 723/723 (100%), Positives = 723/723 (100%)
Query: 1 MAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW 60
MAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW
Sbjct: 1 MAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW 60
Query: 61 EALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYS 120
EALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYS
Sbjct: 61 EALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYS 120
Query: 121 WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAK 180
WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAK
Sbjct: 121 WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAK 180
Query: 181 LLKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDS 240
LLKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDS
Sbjct: 181 LLKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDS 240
Query: 241 SDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQ 300
SDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQ
Sbjct: 241 SDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQ 300
Query: 301 VINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPP 360
VINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPP
Sbjct: 301 VINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPP 360
Query: 361 QASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLL 420
QASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLL
Sbjct: 361 QASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLL 420
Query: 421 QREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAG 480
QREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAG
Sbjct: 421 QREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAG 480
Query: 481 SSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPL 540
SSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPL
Sbjct: 481 SSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPL 540
Query: 541 IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT 600
IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT
Sbjct: 541 IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT 600
Query: 601 AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS 660
AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS
Sbjct: 601 AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS 660
Query: 661 GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW 720
GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW
Sbjct: 661 GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW 720
Query: 721 GNL 723
GNL
Sbjct: 721 GNL 723
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 1355 bits (3506), Expect = 0.0
Identities = 690/723 (95%), Positives = 690/723 (95%), Gaps = 33/723 (4%)
Query: 1 MAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW 60
MAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW
Sbjct: 1 MAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW 60
Query: 61 EALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYS 120
EALQALT YLGDRVSEKVKTKVIELLYS
Sbjct: 61 EALQALT---------------------------------YLGDRVSEKVKTKVIELLYS 87
Query: 121 WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAK 180
WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAK
Sbjct: 88 WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAK 147
Query: 181 LLKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDS 240
LLKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDS
Sbjct: 148 LLKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDS 207
Query: 241 SDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQ 300
SDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQ
Sbjct: 208 SDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQ 267
Query: 301 VINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPP 360
VINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPP
Sbjct: 268 VINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPP 327
Query: 361 QASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLL 420
QASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLL
Sbjct: 328 QASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLL 387
Query: 421 QREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAG 480
QREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAG
Sbjct: 388 QREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAG 447
Query: 481 SSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPL 540
SSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPL
Sbjct: 448 SSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPL 507
Query: 541 IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT 600
IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT
Sbjct: 508 IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT 567
Query: 601 AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS 660
AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS
Sbjct: 568 AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS 627
Query: 661 GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW 720
GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW
Sbjct: 628 GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW 687
Query: 721 GNL 723
GNL
Sbjct: 688 GNL 690
>gi|9558729 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 1 [Homo sapiens]
Length = 639
Score = 635 bits (1638), Expect = 0.0
Identities = 367/729 (50%), Positives = 466/729 (63%), Gaps = 105/729 (14%)
Query: 5 EGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQ 64
E E+LE+ +N+ATNP N++ DW I GFC+Q+N++ EGP +A RLLAHKIQSPQEWEA+Q
Sbjct: 6 EPETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQ 65
Query: 65 ALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMA 124
ALTVLE CMK+CG+RFH+EVGKFRFLNELIKVVSPKYLG R SEKVK K++ELLYSWT+
Sbjct: 66 ALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVG 125
Query: 125 LPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKS 184
LPEE KI +AY MLK+QGIV+SDP +P D T P PPPRPKN +F+DEEKSK+LA+LLKS
Sbjct: 126 LPEEVKIAEAYQMLKKQGIVKSDPKLP-DDTTFPLPPPRPKNVIFEDEEKSKMLARLLKS 184
Query: 185 KNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSDGD 244
+P+DL+ ANKLIK MV+ED+ R++K++KR++ +EEVNNNV+LL+EM++ +SQ ++ G
Sbjct: 185 SHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGS 244
Query: 245 RE-LMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVIN 303
E LMKEL+ +CE R TLF+LAS+TEDND +L +ILQA+DNL++VIN YK ++ G+ +N
Sbjct: 245 SEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVN 304
Query: 304 GEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQAS 363
G+ ++P S L+DL+ LD L PA T P +P P
Sbjct: 305 GDATAGSIPGS--------TSALLDLSGLD--------LPPAGTT----YPAMPTRPGEQ 344
Query: 364 GPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQRE 423
P S+S +S LD+EL+ LGL+DP P P S + W+ Q
Sbjct: 345 ASPEQPSAS--------------VSLLDDELMSLGLSDPTP--PSGPSLDGTGWNSFQ-- 386
Query: 424 QSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSL 483
SS A PP PA APS S
Sbjct: 387 --------------------------------SSDATEPP------APALAQAPSMES-- 406
Query: 484 FSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPT 543
P + ++P +S L LD L + L + + + PT
Sbjct: 407 ---------RPPAQTSLP-------ASSGLDDLDLLGKTLLQQSLPPESQQVRWEKQQPT 450
Query: 544 -TTPARPLLPFSTGPGSPLFQPLSFQSQGS--PPKGP------ELSLASIHVPLESIKPS 594
R L S+ SP S S PP+ P ELSLASI VPLESIKPS
Sbjct: 451 PRLTLRDLQNKSSSCSSPSSSATSLLHTVSPEPPRPPQQPVPTELSLASITVPLESIKPS 510
Query: 595 SALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKV 654
+ LPVT YD++GFRILFHFA++ PGR DVLVVVVSML+TAP P+++IV Q+AVPK MKV
Sbjct: 511 NILPVTVYDQHGFRILFHFARDPLPGRSDVLVVVVSMLSTAPQPIRNIVFQSAVPKVMKV 570
Query: 655 KLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQF 714
KLQPPSGTEL F+PI P+AITQV+LLANP KEKVRLRYKLTF +G+Q E+G+VDQF
Sbjct: 571 KLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDVDQF 630
Query: 715 PPVEQWGNL 723
PP E WG+L
Sbjct: 631 PPPETWGSL 639
>gi|48527952 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 2 [Homo sapiens]
Length = 552
Score = 382 bits (980), Expect = e-106
Identities = 182/274 (66%), Positives = 232/274 (84%), Gaps = 2/274 (0%)
Query: 5 EGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQ 64
E E+LE+ +N+ATNP N++ DW I GFC+Q+N++ EGP +A RLLAHKIQSPQEWEA+Q
Sbjct: 6 EPETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQ 65
Query: 65 ALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMA 124
ALTVLE CMK+CG+RFH+EVGKFRFLNELIKVVSPKYLG R SEKVK K++ELLYSWT+
Sbjct: 66 ALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVG 125
Query: 125 LPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKS 184
LPEE KI +AY MLK+QGIV+SDP +P D T P PPPRPKN +F+DEEKSK+LA+LLKS
Sbjct: 126 LPEEVKIAEAYQMLKKQGIVKSDPKLP-DDTTFPLPPPRPKNVIFEDEEKSKMLARLLKS 184
Query: 185 KNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSDGD 244
+P+DL+ ANKLIK MV+ED+ R++K++KR++ +EEVNNNV+LL+EM++ +SQ ++ G
Sbjct: 185 SHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGS 244
Query: 245 RE-LMKELFDQCENKRRTLFKLASETEDNDNSLG 277
E LMKEL+ +CE R TLF+LAS+TEDND +LG
Sbjct: 245 SEDLMKELYQRCERMRPTLFRLASDTEDNDEALG 278
Score = 226 bits (577), Expect = 4e-59
Identities = 143/274 (52%), Positives = 170/274 (62%), Gaps = 24/274 (8%)
Query: 473 SVPAPSAGSSLFSTG------------VAPALA--PKVEPAVPGHHGLALGNSALHHLDA 518
S P P +G SL TG APALA P +E P L +S L LD
Sbjct: 280 SDPTPPSGPSLDGTGWNSFQSSDATEPPAPALAQAPSMESRPPAQTSLP-ASSGLDDLDL 338
Query: 519 LDQLLEEAKVTSGLVKPTTSPLIPTTT-PARPLLPFSTGPGSPLFQPLSFQSQGSP--PK 575
L + L + + + PT R L S+ SP S SP P+
Sbjct: 339 LGKTLLQQSLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCSSPSSSATSLLHTVSPEPPR 398
Query: 576 GP------ELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVV 629
P ELSLASI VPLESIKPS+ LPVT YD++GFRILFHFA++ PGR DVLVVVV
Sbjct: 399 PPQQPVPTELSLASITVPLESIKPSNILPVTVYDQHGFRILFHFARDPLPGRSDVLVVVV 458
Query: 630 SMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEK 689
SML+TAP P+++IV Q+AVPK MKVKLQPPSGTEL F+PI P+AITQV+LLANP KEK
Sbjct: 459 SMLSTAPQPIRNIVFQSAVPKVMKVKLQPPSGTELPAFNPIVHPSAITQVLLLANPQKEK 518
Query: 690 VRLRYKLTFALGEQLSTEVGEVDQFPPVEQWGNL 723
VRLRYKLTF +G+Q E+G+VDQFPP E WG+L
Sbjct: 519 VRLRYKLTFTMGDQTYNEMGDVDQFPPPETWGSL 552
>gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens]
Length = 613
Score = 346 bits (888), Expect = 4e-95
Identities = 207/476 (43%), Positives = 290/476 (60%), Gaps = 32/476 (6%)
Query: 8 SLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALT 67
SLE WLNKAT+PS ++DW I FC+Q+N + GP A LLAHKIQSPQE EAL ALT
Sbjct: 25 SLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALT 84
Query: 68 VLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALPE 127
VLE CM +CG +FH+EV KFRFLNELIKV+SPKYLG + KVK +VIE+L+SWT+ PE
Sbjct: 85 VLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPE 144
Query: 128 EAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFD-DEEKSKLLAKLLKSKN 186
+ KI+DAY MLK+QGI++ DP +PVD+ ++P P P PK+ +FD DEEKSKLL +LLKS +
Sbjct: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDK-ILPPPSPWPKSSIFDADEEKSKLLTRLLKSNH 203
Query: 187 PDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSDGDRE 246
P+DLQ AN+LIK++VKE++ + +KV+KR+ +EEV ++V++L EML Y + + D+E
Sbjct: 204 PEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQE 263
Query: 247 LMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVINGEV 306
++ ++++CE R TLF+LAS+T D+D++L +ILQA+D L++ + YK ++EG+V G
Sbjct: 264 ALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEGRVTFGNR 323
Query: 307 ATLTLPD------SEGNSQCSNQGTLIDLAELDTTNSLSSVLAPA---PTPPSSGIPILP 357
T +L D + + C LIDL E+D + + P+ + GI P
Sbjct: 324 VTSSLGDIPVSRVFQNPAGCMKTCPLIDL-EVDNGPAQMGTVVPSLLHQDLAALGISDAP 382
Query: 358 PPPQASGPP-RSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAP---------NVP 407
SG + + +TL N + D LL L A PAP +VP
Sbjct: 383 VTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSA--DRNLLDLLSAQPAPCPLNYVSQKSVP 440
Query: 408 PKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPP 463
+ G E L +P P + + PL Q P S + LPP
Sbjct: 441 KEVPPGTKSSPGWSWEAGPL---APSP-----SSQNTPLAQVFVPLESVKPSSLPP 488
Score = 166 bits (421), Expect = 5e-41
Identities = 90/181 (49%), Positives = 119/181 (65%), Gaps = 12/181 (6%)
Query: 541 IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT 600
+P T + P + GP +P S SQ +P LA + VPLES+KPSS P+
Sbjct: 443 VPPGTKSSPGWSWEAGPLAP-----SPSSQNTP-------LAQVFVPLESVKPSSLPPLI 490
Query: 601 AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS 660
YD+NGFRIL HF++ PG P+V V++++M++TAP PV I+ Q AVPKSM+VKLQP S
Sbjct: 491 VYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPAS 550
Query: 661 GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW 720
++L FSP+ PPA I+Q++LL NP KE +RLRYKLTF G Q +EVGEV FP +
Sbjct: 551 SSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFPDLAVL 610
Query: 721 G 721
G
Sbjct: 611 G 611
>gi|239758145 PREDICTED: similar to ADP-ribosylation factor binding
protein 2 [Homo sapiens]
Length = 134
Score = 141 bits (356), Expect = 2e-33
Identities = 69/124 (55%), Positives = 91/124 (73%)
Query: 598 PVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQ 657
P+ YD+NGFRIL HF++ PG P+V V++++M++TAP PV I+ Q AVPKSM+VKLQ
Sbjct: 9 PLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQ 68
Query: 658 PPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPV 717
P S ++L FSP+ PPA I+Q++LL NP KE +RLRYKLTF G Q +EVGEV FP +
Sbjct: 69 PASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFPDL 128
Query: 718 EQWG 721
G
Sbjct: 129 AVLG 132
>gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens]
Length = 507
Score = 123 bits (309), Expect = 5e-28
Identities = 109/393 (27%), Positives = 179/393 (45%), Gaps = 45/393 (11%)
Query: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTVLEA 71
L KAT+ S + EDW + CD IN+ EGP+ A+R L ++ + + E + ALTVLE
Sbjct: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLET 76
Query: 72 CMKNCGRRFHNEVGKFRFLNE-LIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL---PE 127
C+KNCG RFH V F++ L+K++SPK + V+ KV+ L+ +W A P+
Sbjct: 77 CVKNCGHRFHILVANRDFIDSVLVKIISPK---NNPPTIVQDKVLALIQAWADAFRSSPD 133
Query: 128 EAKIKDAYHMLKRQGI------VQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKL 181
+ Y LKR+G+ + + PI + +P P P ++++ A
Sbjct: 134 LTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTS--AGS 191
Query: 182 LKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHY--SQED 239
S P S+ A +++ + L+ V N +++SEML QED
Sbjct: 192 YSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQED 251
Query: 240 SSDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEG 299
SS D EL++EL C ++ + +L S N+ ++L +D+L+ V Y+
Sbjct: 252 SS--DLELLQELNRTCRAMQQRIVELISRV-SNEEVTEELLHVNDDLNNVFLRYERFERY 308
Query: 300 QVINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPP 359
+ S + Q ++ G L ++ E +++ P P+ ++ P
Sbjct: 309 R-------------SGRSVQNASNGVLNEVTE-------DNLIDLGPGSPA----VVSPM 344
Query: 360 PQASGPPRSRSSSQAEATLGPSSTSNALSWLDE 392
+ PP S SS A LG S S LS L +
Sbjct: 345 VGNTAPPSSLSSQLAGLDLGTESVSGTLSSLQQ 377
>gi|209180457 target of myb1 isoform 2 [Homo sapiens]
Length = 493
Score = 108 bits (271), Expect = 1e-23
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 19/287 (6%)
Query: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTVLEA 71
+ KAT+ S + EDW + CD IN+ EGP+ A+R + +I + + E + ALTVLE
Sbjct: 17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLET 76
Query: 72 CMKNCGRRFHNEVGKFRFLNE-LIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL---PE 127
C+KNCG RFH V F+ L++ + PK + V KV+ L+ SW A P+
Sbjct: 77 CVKNCGHRFHVLVASQDFVESVLVRTILPK---NNPPTIVHDKVLNLIQSWADAFRSSPD 133
Query: 128 EAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKS-KLLAKLLKSKN 186
+ Y L+R+G+ P+ + SP P+ VF+ E +S + S+
Sbjct: 134 LTGVVTIYEDLRRKGL-----EFPMTDLDMLSPIHTPQRTVFNSETQSGQDSVGTDSSQQ 188
Query: 187 PDDLQEANKLIKSMVKEDEARI----QKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSD 242
D Q A L + + I +++ K LE V+ NVR++SEML +
Sbjct: 189 EDSGQHAAPLPAPPILSGDTPIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEP 248
Query: 243 GDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRV 289
D EL++EL C ++ + +L + N+ ++L +DNL+ V
Sbjct: 249 ADLELLQELNRTCRAMQQRVLELIPQIA-NEQLTEELLIVNDNLNNV 294
>gi|4885637 target of myb1 isoform 1 [Homo sapiens]
Length = 492
Score = 108 bits (271), Expect = 1e-23
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 19/287 (6%)
Query: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTVLEA 71
+ KAT+ S + EDW + CD IN+ EGP+ A+R + +I + + E + ALTVLE
Sbjct: 17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLET 76
Query: 72 CMKNCGRRFHNEVGKFRFLNE-LIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL---PE 127
C+KNCG RFH V F+ L++ + PK + V KV+ L+ SW A P+
Sbjct: 77 CVKNCGHRFHVLVASQDFVESVLVRTILPK---NNPPTIVHDKVLNLIQSWADAFRSSPD 133
Query: 128 EAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKS-KLLAKLLKSKN 186
+ Y L+R+G+ P+ + SP P+ VF+ E +S + S+
Sbjct: 134 LTGVVTIYEDLRRKGL-----EFPMTDLDMLSPIHTPQRTVFNSETQSGQDSVGTDSSQQ 188
Query: 187 PDDLQEANKLIKSMVKEDEARI----QKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSD 242
D Q A L + + I +++ K LE V+ NVR++SEML +
Sbjct: 189 EDSGQHAAPLPAPPILSGDTPIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEP 248
Query: 243 GDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRV 289
D EL++EL C ++ + +L + N+ ++L +DNL+ V
Sbjct: 249 ADLELLQELNRTCRAMQQRVLELIPQIA-NEQLTEELLIVNDNLNNV 294
>gi|209180448 target of myb1 isoform 3 [Homo sapiens]
Length = 460
Score = 96.3 bits (238), Expect = 9e-20
Identities = 80/267 (29%), Positives = 129/267 (48%), Gaps = 19/267 (7%)
Query: 33 CDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTVLEACMKNCGRRFHNEVGKFRFLN 91
CD IN+ EGP+ A+R + +I + + E + ALTVLE C+KNCG RFH V F+
Sbjct: 4 CDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVE 63
Query: 92 E-LIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL---PEEAKIKDAYHMLKRQGIVQSD 147
L++ + PK + V KV+ L+ SW A P+ + Y L+R+G+
Sbjct: 64 SVLVRTILPK---NNPPTIVHDKVLNLIQSWADAFRSSPDLTGVVTIYEDLRRKGL---- 116
Query: 148 PPIPVDRTLIPSPPPRPKNPVFDDEEKS-KLLAKLLKSKNPDDLQEANKLIKSMVKEDEA 206
P+ + SP P+ VF+ E +S + S+ D Q A L + +
Sbjct: 117 -EFPMTDLDMLSPIHTPQRTVFNSETQSGQDSVGTDSSQQEDSGQHAAPLPAPPILSGDT 175
Query: 207 RI----QKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSDGDRELMKELFDQCENKRRTL 262
I +++ K LE V+ NVR++SEML + D EL++EL C ++ +
Sbjct: 176 PIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRV 235
Query: 263 FKLASETEDNDNSLGDILQASDNLSRV 289
+L + N+ ++L +DNL+ V
Sbjct: 236 LELIPQIA-NEQLTEELLIVNDNLNNV 261
>gi|48527954 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 3 [Homo sapiens]
Length = 89
Score = 94.7 bits (234), Expect = 3e-19
Identities = 42/64 (65%), Positives = 54/64 (84%)
Query: 5 EGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQ 64
E E+LE+ +N+ATNP N++ DW I GFC+Q+N++ EGP +A RLLAHKIQSPQEWEA+Q
Sbjct: 6 EPETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQ 65
Query: 65 ALTV 68
ALTV
Sbjct: 66 ALTV 69
>gi|191252812 target of myb1-like 1 [Homo sapiens]
Length = 476
Score = 94.0 bits (232), Expect = 4e-19
Identities = 108/480 (22%), Positives = 209/480 (43%), Gaps = 93/480 (19%)
Query: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQ-ALTVLEA 71
+ KAT + EDW + CD IN +GP+ AV+ L +I + +Q L++++
Sbjct: 19 IEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSLIDM 78
Query: 72 CMKNCGRRFHNEVGKFRFLNE-LIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALP---E 127
C++NCG F + + K F+ E L+K+++P+Y + ++ +++ + +W+ P +
Sbjct: 79 CVQNCGPSFQSLIVKKEFVKENLVKLLNPRY---NLPLDIQNRILNFIKTWSQGFPGGVD 135
Query: 128 EAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKSKNP 187
+++K+ Y L ++G+ PP +E +++ S NP
Sbjct: 136 VSEVKEVYLDLVKKGV---------------QFPPSEAEAETARQETAQI------SSNP 174
Query: 188 DDLQEANKLIKSMVKEDEARIQKVTK---RLHT-LEEVNNNVRLLSEMLLHYSQEDSSDG 243
+ S++ + + V + +LH+ L+ V NVR++S +L+ + +
Sbjct: 175 PTSVPTAPALSSVIAPKNSTVTLVPEQIGKLHSELDMVKMNVRVMSAILMENTPGSENHE 234
Query: 244 DRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVIN 303
D EL+++L+ + + L E+ D ++ +++Q +++L+ I Y+ Q
Sbjct: 235 DIELLQKLYKTGREMQERIMDLLVVVENEDVTV-ELIQVNEDLNNAILGYERFTRNQ--- 290
Query: 304 GEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQAS 363
L ++ + +N TT+ P+ PS + L P P+
Sbjct: 291 ----QRILEQNKNQKEATN-----------TTSE--------PSAPSQDLLDLSPSPRM- 326
Query: 364 GPPRSRSSSQAEATLGPSST-SNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQR 422
PR ATLG +T +N LS L+ L +D N+ P + + Q +LL
Sbjct: 327 --PR--------ATLGELNTMNNQLSGLN---FSLPSSDVTNNLKP---SLHPQMNLLAL 370
Query: 423 EQSDLDFFSPRPGTAACGA---------SDAPLLQP------SAPSSSSSQAPLPPPFPA 467
E +++ F+ R + S++ LQP +A S+ S PLP PA
Sbjct: 371 ENTEIPPFAQRTSQNLTSSHAYDNFLEHSNSVFLQPVSLQTIAAAPSNQSLPPLPSNHPA 430
>gi|209180450 target of myb1 isoform 4 [Homo sapiens]
Length = 447
Score = 82.0 bits (201), Expect = 2e-15
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTVLEA 71
+ KAT+ S + EDW + CD IN+ EGP+ A+R + +I + + E + ALTVLE
Sbjct: 17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLET 76
Query: 72 CMKNCGRRFHNEVGKFRFLNE-LIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALPEEAK 130
C+KNCG RFH V F+ L++ + PK + V KV+ L+ + + + +
Sbjct: 77 CVKNCGHRFHVLVASQDFVESVLVRTILPK---NNPPTIVHDKVLNLIQTVFNSETQSGQ 133
Query: 131 IKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKSKNPDDL 190
+++ Q P+P L P P
Sbjct: 134 DSVGTDSSQQEDSGQHAAPLPAPPILSGDTPIAPTP------------------------ 169
Query: 191 QEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSDGDRELMKE 250
+++ K LE V+ NVR++SEML + D EL++E
Sbjct: 170 ------------------EQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQE 211
Query: 251 LFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRV 289
L C ++ + +L + N+ ++L +DNL+ V
Sbjct: 212 LNRTCRAMQQRVLELIPQIA-NEQLTEELLIVNDNLNNV 249
>gi|71773010 adaptor-related protein complex 1, gamma 1 subunit
isoform a [Homo sapiens]
Length = 825
Score = 77.8 bits (190), Expect = 3e-14
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 538 SPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPE-LSLASIHVPLESIKPSSA 596
+P+IPT ++P S+ G L G+P P S+ I P + S+
Sbjct: 641 TPVIPTAPTSKP----SSAGGELLDLLGDINLTGAPAAAPAPASVPQISQPPFLLDGLSS 696
Query: 597 LP-----------VTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQ 645
P +TAY KNG +I F F + P V V+ + N+ L + V Q
Sbjct: 697 QPLFNDIAAGIPSITAYSKNGLKIEFTFERSNT--NPSVTVITIQASNSTELDMTDFVFQ 754
Query: 646 AAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLS 705
AAVPK+ +++L PS + + F+ ITQV+ + NP K+++R+R KLT+
Sbjct: 755 AAVPKTFQLQLLSPSSSIVPAFNT----GTITQVIKVLNPQKQQLRMRIKLTYNHKGSAM 810
Query: 706 TEVGEVDQFPPVEQW 720
++ EV+ FPP + W
Sbjct: 811 QDLAEVNNFPP-QSW 824
>gi|71772942 adaptor-related protein complex 1, gamma 1 subunit
isoform b [Homo sapiens]
Length = 822
Score = 77.8 bits (190), Expect = 3e-14
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 538 SPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPE-LSLASIHVPLESIKPSSA 596
+P+IPT ++P S+ G L G+P P S+ I P + S+
Sbjct: 638 TPVIPTAPTSKP----SSAGGELLDLLGDINLTGAPAAAPAPASVPQISQPPFLLDGLSS 693
Query: 597 LP-----------VTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQ 645
P +TAY KNG +I F F + P V V+ + N+ L + V Q
Sbjct: 694 QPLFNDIAAGIPSITAYSKNGLKIEFTFERSNT--NPSVTVITIQASNSTELDMTDFVFQ 751
Query: 646 AAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLS 705
AAVPK+ +++L PS + + F+ ITQV+ + NP K+++R+R KLT+
Sbjct: 752 AAVPKTFQLQLLSPSSSIVPAFNT----GTITQVIKVLNPQKQQLRMRIKLTYNHKGSAM 807
Query: 706 TEVGEVDQFPPVEQW 720
++ EV+ FPP + W
Sbjct: 808 QDLAEVNNFPP-QSW 821
>gi|188219625 signal transducing adaptor molecule 2 [Homo sapiens]
Length = 525
Score = 75.9 bits (185), Expect = 1e-13
Identities = 95/400 (23%), Positives = 158/400 (39%), Gaps = 53/400 (13%)
Query: 10 ESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTVL 69
E + KATN N EDW I+ CD++ G + ++ + ++ ALQALT+L
Sbjct: 10 EQDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLL 69
Query: 70 EACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL---P 126
AC+ NCG+ FH EV F E+ V+ K +V EK+K+ ++E W+ P
Sbjct: 70 GACVANCGKIFHLEVCSRDFATEVRAVIKNK-AHPKVCEKLKSLMVE----WSEEFQKDP 124
Query: 127 EEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKSKN 186
+ + I +K +GI + PP + N +DE+ +K + L+ +
Sbjct: 125 QFSLISATIKSMKEEGI--TFPPAGSQTVSAAAKNGTSSNKNKEDEDIAKAIELSLQEQK 182
Query: 187 PDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLL--SEMLLHYSQEDSS--D 242
E L S + ++ + + L+ E V +N E+++ D++
Sbjct: 183 QQH-TETKSLYPSSEIQLNNKVARKVRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWK 241
Query: 243 GDRELMKELFDQCENKRRTLFKLASETEDNDNSLGD---ILQASDNLSRVINSYKTIIEG 299
G+ LF + + D N + D ++ S+ I+ K
Sbjct: 242 GENHRGIGLFPSNFVTTNLNIETEAAAVDKLNVIDDDVEEIKKSEPEPVYIDEDKMDRAL 301
Query: 300 QVINGEVATLTLPDSEG----NSQCSNQGTLID--LAELDTTNS---------------- 337
QV+ T + PDS+ C G +ID L E+D +S
Sbjct: 302 QVLQSIDPTDSKPDSQDLLDLEDICQQMGPMIDEKLEEIDRKHSELSELNVKVLEALELY 361
Query: 338 ------------LSSVLAPAPTPP-SSGIPILPPPPQASG 364
S + PA PP SSG+P+ P Q+ G
Sbjct: 362 NKLVNEAPVYSVYSKLHPPAHYPPASSGVPMQTYPVQSHG 401
>gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens]
Length = 540
Score = 75.1 bits (183), Expect = 2e-13
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTVLEAC 72
+ KAT+ N EDW I+ CD++ + GP+ +R + ++ A+QALT+L AC
Sbjct: 13 VEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGAC 72
Query: 73 MKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL---PEEA 129
+ NCG+ FH EV F +E+ V++ + +V EK+K ++E WT P+ +
Sbjct: 73 VSNCGKIFHLEVCSRDFASEVSNVLNKGH--PKVCEKLKALMVE----WTDEFKNDPQLS 126
Query: 130 KIKDAYHMLKRQGI 143
I LK QG+
Sbjct: 127 LISAMIKNLKEQGV 140
>gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [Homo
sapiens]
Length = 785
Score = 72.4 bits (176), Expect = 1e-12
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 524 EEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLAS 583
EEAK + + + + +PT A LL L S Q P P A
Sbjct: 597 EEAKESKEAAQLSEAAPVPTEPQASQLLDLLD-----LLDGASGDVQHPPHLDPSPGGAL 651
Query: 584 IHV---PLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVK 640
+H+ P P+ + +++ G ++ F + PP P +L++ ++ N + V
Sbjct: 652 VHLLDLPCVPPPPAPIPDLKVFEREGVQLNLSFIR--PPENPALLLITITATNFSEGDVT 709
Query: 641 SIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFAL 700
+ QAAVPKS++++LQ PSG + P + ITQ+ + NP K +RL+ +LT+
Sbjct: 710 HFICQAAVPKSLQLQLQAPSGNTV----PARGGLPITQLFRILNPNKAPLRLKLRLTYDH 765
Query: 701 GEQLSTEVGEVDQFPPVEQW 720
Q E+ EV+ PVE W
Sbjct: 766 FHQSVQEIFEVNNL-PVESW 784
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 71.2 bits (173), Expect = 3e-12
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 8 SLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALT 67
+ E L+KAT+ + DWE I+ CD I + + AV + K+ AL AL
Sbjct: 7 TFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALE 66
Query: 68 VLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALPE 127
V+E+ +KNCG+ H+EV + + EL L +V V+ K++ L+ +W A
Sbjct: 67 VMESVVKNCGQTVHDEVANKQTMEEL-----KDLLKRQVEVNVRNKILYLIQAWAHAFRN 121
Query: 128 EAK---IKDAYHMLKRQGIV 144
E K ++D Y ++K +G V
Sbjct: 122 EPKYKVVQDTYQIMKVEGHV 141
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 68.9 bits (167), Expect = 2e-11
Identities = 118/395 (29%), Positives = 152/395 (38%), Gaps = 56/395 (14%)
Query: 342 LAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLAD 401
LAPAP PPSSG+P + P P R + TLG + L LL L +
Sbjct: 1327 LAPAPRPPSSGLPAVLNPRPTLTPGRLPT-----PTLGTARAPMPTPTLVRPLLKL-VHS 1380
Query: 402 PAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACG---ASDAPLLQP-----SAPS 453
P+P V + G + + S L S PG A+ + +PL P S P
Sbjct: 1381 PSPEV-SASAPGAAPLTI----SSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPL 1435
Query: 454 SSSSQAPLPPPFPAP-----VVPASVP-APSAGSSLFSTGVAPALAPKVEPAVPGHHGLA 507
SSS +P PAP +P S P SA T V P LAP V PA PG LA
Sbjct: 1436 SSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAP-VVPAAPGPPSLA 1494
Query: 508 LGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPG-SPLFQPLS 566
+ A AL L A S P L+ T+ P L + P SP+ P S
Sbjct: 1495 -PSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPAS 1553
Query: 567 FQSQGSP-PKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVL 625
+ P P + AS+ P S + A P+ IL PP P L
Sbjct: 1554 ALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAIL--APSPAPPLAP--L 1609
Query: 626 VVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS---GTELSPFSPIQPPAAI-----T 677
V+ AP+ S Q VP + PS GT L+ SP+ P + T
Sbjct: 1610 PVLAPSPGAAPVLASS---QTPVP------VMAPSSTPGTSLASASPVPAPTPVLAPSST 1660
Query: 678 QVMLLA---NPLKEKVRLRYKLTFALGEQLSTEVG 709
Q ML A +PL + T AL L+ +G
Sbjct: 1661 QTMLPAPVPSPLPSPASTQ---TLALAPALAPTLG 1692
Score = 57.8 bits (138), Expect = 4e-08
Identities = 71/254 (27%), Positives = 99/254 (38%), Gaps = 34/254 (13%)
Query: 339 SSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLG 398
+++LAP+P PP + +P+L P P A+ P SS + PSST L
Sbjct: 1595 TAILAPSPAPPLAPLPVLAPSPGAA--PVLASSQTPVPVMAPSSTPGT---------SLA 1643
Query: 399 LADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPG---TAACGASDAPLLQPSAPSSS 455
A P P P + ++Q L S L P P T A + AP L S+PS +
Sbjct: 1644 SASPVPAPTPVLAPSSTQTMLPAPVPSPL----PSPASTQTLALAPALAPTLGGSSPSQT 1699
Query: 456 SSQAPLPP--PFPA---PVVPASVPAPSAGSSLFSTGVAPALAP----KVEPAVPGHHGL 506
S P PFP + PAS P+ +L S P L P + PA P
Sbjct: 1700 LSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTL-SLAPGPPLGPTQTLSLAPAPPLAPAS 1758
Query: 507 ALGNSALHHL-----DALDQLLEEAKVTSGLVKPTTSPLI-PTTTPARPLLPFSTGPGSP 560
+G + H L + LL A V + + P P + P L P ST +
Sbjct: 1759 PVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPAS 1818
Query: 561 LFQPLSFQSQGSPP 574
L + G+ P
Sbjct: 1819 QASSLVVSASGAAP 1832
Score = 48.5 bits (114), Expect = 2e-05
Identities = 84/359 (23%), Positives = 128/359 (35%), Gaps = 56/359 (15%)
Query: 334 TTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEE 393
T ++ L + TPP + P P A GPP +L PS S + S
Sbjct: 1464 TVSASGPALLTSVTPP-----LAPVVPAAPGPP----------SLAPSGASPSAS----- 1503
Query: 394 LLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPS 453
L LGLA AP++ ++ G+ LL S + PG ++ AP P
Sbjct: 1504 ALTLGLAT-APSLSSSQTPGHPL--LLAPTSSHV------PGL---NSTVAPACSPVLVP 1551
Query: 454 SSSSQAPLPP-PFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSA 512
+S+ +P P P PAP + + S+ S +T +AP AP+ P
Sbjct: 1552 ASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPV 1611
Query: 513 LHHLDALDQLLEEAKVTSGLVKPTTSP------LIPTTTPARPLLPFSTGPGSPLFQPLS 566
L +L ++ ++ P+++P P P L P ST P P
Sbjct: 1612 LAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSP 1671
Query: 567 FQSQGSPPKGPELSLASIHVP-LESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVL 625
S P L+LA P L PS L + + G P
Sbjct: 1672 LPS---PASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQG-------------PFPTQT 1715
Query: 626 VVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLAN 684
+ + + P P +++ L P L L+P SP+ P A T + A+
Sbjct: 1716 LSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPAS 1774
Score = 44.7 bits (104), Expect = 3e-04
Identities = 73/266 (27%), Positives = 100/266 (37%), Gaps = 48/266 (18%)
Query: 335 TNSLSSVLAPAPTP---PSSGIPILPPPPQASGPPRSRSSSQAEA-----TLGPSSTSNA 386
T+ S+ PAPTP PSS +LP P + P + + + A A TLG SS S
Sbjct: 1640 TSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQT 1699
Query: 387 LSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPL 446
LS LG +P P + + L+ P P A PL
Sbjct: 1700 LS--------LGTGNPQGPFPTQTLSLTPASSLV-----------PTPAQTLSLAPGPPL 1740
Query: 447 LQPSAPSSSSSQAPLPPPFPA-PVVPAS------VPAPSAGSSLFSTGV-----APALAP 494
P+ + S AP PP PA PV PA PA S+ S L V +PA P
Sbjct: 1741 ----GPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVP 1796
Query: 495 KVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFS 554
+ PA LAL ++ + L + + + T +P + L
Sbjct: 1797 TLGPAAA--QTLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLR 1854
Query: 555 TGPGSPLFQPLSF---QSQGSPPKGP 577
+GP SP SF + + PP P
Sbjct: 1855 SGPPSPPSTATSFGGPRPRRQPPPPP 1880
Score = 44.3 bits (103), Expect = 4e-04
Identities = 86/383 (22%), Positives = 144/383 (37%), Gaps = 79/383 (20%)
Query: 342 LAPAPTPPSSGI--PILPPP----PQASGPPRSRSSSQAEATLGPSSTSNALSWL----- 390
L+PAP P SS + P+ PP P A+ S +++ A T P+ T +
Sbjct: 1116 LSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDM 1175
Query: 391 -----DEELLCLG-LADPAPNVPPKESAGNSQWHLLQREQSDLDFFS----------PRP 434
E++ +G LA A P +AG S+ Q + + L PRP
Sbjct: 1176 QARLPSGEVVSIGQLASLAQR--PVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRP 1233
Query: 435 ------GTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGV 488
+ G + QP+ + + AP P P P V+P+S P+ + + S
Sbjct: 1234 LQRNVVHLVSAGGQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLS--- 1290
Query: 489 APALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPAR 548
P A +V P + + G+ +++ GL TP
Sbjct: 1291 LPLAANQVPPTMVNNTGVV-------------KIVVRQAPRDGL------------TPVP 1325
Query: 549 PLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLES---IKP------SSALPV 599
PL P P S L L+ + +P + P +L + P+ + ++P S + V
Sbjct: 1326 PLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEV 1385
Query: 600 TAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPL--PVKSIV---LQAAVPKSMKV 654
+A + P P + + N++PL PV S V L +++P S+
Sbjct: 1386 SASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPT 1445
Query: 655 KLQPPSGTELSPFSPIQPPAAIT 677
L P+ L+ PI P ++
Sbjct: 1446 TLPAPASAPLT--IPISAPLTVS 1466
Score = 36.2 bits (82), Expect = 0.11
Identities = 47/172 (27%), Positives = 68/172 (39%), Gaps = 25/172 (14%)
Query: 441 ASDAPLLQPSAPSSSS---SQAPLP---PPFPAPVVPASVPAPSAGSSLFST--GVAPAL 492
ASD PL +P +S ++A P P P +V A V APS SS S+ G +PA
Sbjct: 2659 ASDEPLQEPLEADRTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATSSPEGPSPAR 2718
Query: 493 APKVEPAVP--------GHHGLALGNSALHHLDA-LDQLLEEAKVTSGL--VKPTTSPLI 541
P+ + G G G L L L ++EE ++ + S L+
Sbjct: 2719 PPRRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRLVTVVEEKELVRRRRQQRGAASTLV 2778
Query: 542 PTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKP 593
P + S PGSP + +S P GP + S +P +P
Sbjct: 2779 PGVSET------SASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPTPPQQP 2824
Score = 34.7 bits (78), Expect = 0.32
Identities = 65/267 (24%), Positives = 94/267 (35%), Gaps = 64/267 (23%)
Query: 342 LAPAPTPPSS----GIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCL 397
+ P+P PPS P PPP + PP + PSS L L
Sbjct: 2481 ILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSP-----------LLL 2529
Query: 398 GLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSS 457
G P+VP S N L R +++L A + ++ L A S +SS
Sbjct: 2530 G----PPSVPISASVTNLPLGL--RPEAEL-------CAQALASPESLELASVASSETSS 2576
Query: 458 QAPLPPPFPAPVVPASVP--------APSAGSSLFSTGVAP----------------ALA 493
+ +PP PV +P PSA S G P +
Sbjct: 2577 LSLVPPKDLLPVAVEILPVSEKNLSLTPSAPSLTLEAGSIPNGQEQEAPDSAEGTTLTVL 2636
Query: 494 PKVEP---AVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPL 550
P+ E V +GL L SA A D+ L+E + T PT++P +P
Sbjct: 2637 PEGEELPLCVSESNGLELPPSA-----ASDEPLQEPLEADRTSEELTEAKTPTSSPEKPQ 2691
Query: 551 LPFSTGPGSPLFQPLSFQSQGSPPKGP 577
+ + + P + S S P+GP
Sbjct: 2692 ELVT----AEVAAPSTSSSATSSPEGP 2714
Score = 32.0 bits (71), Expect = 2.1
Identities = 41/150 (27%), Positives = 51/150 (34%), Gaps = 24/150 (16%)
Query: 341 VLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLA 400
V+ P P +P+ PPP GP S A+ T GP L L+
Sbjct: 1010 VVVNNPRAPLGPVPVRPPP----GPELS-----AQPTPGPVPQV-----LPASLMVSASP 1055
Query: 401 DPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAP 460
P +P G LQ L P P G S +P P+ S
Sbjct: 1056 AGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTS-----RPPTPTLS----- 1105
Query: 461 LPPPFPAPVVPASVPAPSAGSSLFSTGVAP 490
L P PAPV + P P + S L V P
Sbjct: 1106 LKPTPPAPVRLSPAPPPGSSSLLKPLTVPP 1135
Score = 30.8 bits (68), Expect = 4.6
Identities = 40/134 (29%), Positives = 49/134 (36%), Gaps = 18/134 (13%)
Query: 459 APLPPPFPAPV------VPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSA 512
AP PPP P PV + VP + + L P PG SA
Sbjct: 980 APDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPE-----LSA 1034
Query: 513 LHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLL--PFSTGPGS---PLFQPLSF 567
+ Q+L + + S P PLIP + P P+L P GS L PL
Sbjct: 1035 QPTPGPVPQVLPASLMVS--ASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGV 1092
Query: 568 QSQGSPPKGPELSL 581
S S P P LSL
Sbjct: 1093 LSGTSRPPTPTLSL 1106
Score = 30.4 bits (67), Expect = 6.0
Identities = 63/294 (21%), Positives = 97/294 (32%), Gaps = 68/294 (23%)
Query: 432 PRPGTAACGASDAPLLQPSAPSSSSSQAPL---------------PPPFPAPVVPASVPA 476
PRP A+ A+ L+ P S+ P+ PP P+ + P S PA
Sbjct: 2443 PRPTPASAPAAIPALV----PVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPA 2498
Query: 477 ---------------PSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQ 521
P A + L + L P P L LG L A
Sbjct: 2499 CTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSVPISASVTNLPLGLRPEAELCAQAL 2558
Query: 522 LLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSL 581
E+ + + TS L + P + LLP + P+S ++ P P L+L
Sbjct: 2559 ASPESLELASVASSETSSL--SLVPPKDLLPVAVE-----ILPVSEKNLSLTPSAPSLTL 2611
Query: 582 ASIHVP--LESIKPSSA-------------LPVTAYDKNGFRILFHFAKECPPGRP---- 622
+ +P E P SA LP+ + NG + A + P P
Sbjct: 2612 EAGSIPNGQEQEAPDSAEGTTLTVLPEGEELPLCVSESNGLELPPSAASDEPLQEPLEAD 2671
Query: 623 ---DVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPP 673
+ L + ++ P + + + A P + P G SP +PP
Sbjct: 2672 RTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATSSPEGP-----SPARPP 2720
>gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens]
Length = 457
Score = 66.6 bits (161), Expect = 8e-11
Identities = 90/383 (23%), Positives = 151/383 (39%), Gaps = 75/383 (19%)
Query: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTVLEA 71
L KAT+ S + EDW + CD IN+ EGP+ A+R L ++ + + E + ALT
Sbjct: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTAW-- 74
Query: 72 CMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALPEEAKI 131
FR +L VV + E++K K +E + AL
Sbjct: 75 ------------ADAFRSSPDLTGVV-------HIYEELKRKGVEFPMADLDALS----- 110
Query: 132 KDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKSKNPDDLQ 191
PI + +P P P ++++ + P
Sbjct: 111 -----------------PIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAP 153
Query: 192 EANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHY--SQEDSSDGDRELMK 249
+A L S+ A +++ + L+ V N +++SEML QEDSS D EL++
Sbjct: 154 QAPAL--SVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSS--DLELLQ 209
Query: 250 ELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVINGEVATL 309
EL C ++ + +L S N+ ++L +D+L+ V Y+ +
Sbjct: 210 ELNRTCRAMQQRIVELISRV-SNEEVTEELLHVNDDLNNVFLRYERFERYR--------- 259
Query: 310 TLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSR 369
S + Q ++ G L ++ E +++ P P+ ++ P + PP S
Sbjct: 260 ----SGRSVQNASNGVLNEVTE-------DNLIDLGPGSPA----VVSPMVGNTAPPSSL 304
Query: 370 SSSQAEATLGPSSTSNALSWLDE 392
SS A LG S S LS L +
Sbjct: 305 SSQLAGLDLGTESVSGTLSSLQQ 327
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 58.9 bits (141), Expect = 2e-08
Identities = 109/423 (25%), Positives = 155/423 (36%), Gaps = 73/423 (17%)
Query: 306 VATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSS-------GIPILPP 358
+++L S G+ + + ++ T SL+S PA TPP S +P PP
Sbjct: 409 LSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPP 468
Query: 359 PPQASGPPRSRSSS-------QAEATLGPSSTSNALSWL-------DEELLCLGLADPAP 404
+ P S SS QA ++L S LS L L L P
Sbjct: 469 LQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPA 528
Query: 405 NV--PPKESAGNSQWHLLQREQSDLDF----FSPRPGTAACGASDAPLL--QPSAPSSSS 456
++ PP E+ + LQ + L P P A +PL P PSS +
Sbjct: 529 SLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIA 588
Query: 457 SQAPLPPPFPA----------PVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGL 506
+ P PP A P+ P + P P A L + P AP PA P L
Sbjct: 589 TPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXL---ALPPLQAPPSPPASPPLSPL 645
Query: 507 ALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGS--PLFQP 564
A + +AL L +A + P +P P +P P+ P +T P P
Sbjct: 646 ATPSPQAP--NALAVHLLQAPFSPPPSPPVQAPFSPPASP--PVSPSATPPSQAPPSLAA 701
Query: 565 LSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDV 624
Q SPP P +S S P ++ P +A P+ + PP P
Sbjct: 702 PPLQVPPSPPASPPMS-PSATPPPQAPPPLAAPPL----------------QVPPSPP-- 742
Query: 625 LVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFS--PIQPPAAITQVMLL 682
M +A P + L AA P ++V PP+ +SP + P Q P A+ L
Sbjct: 743 --ASPPMSPSATPPPRVPPLLAAPP--LQVPPSPPASLPMSPLAKPPPQAPPALATPPLQ 798
Query: 683 ANP 685
A P
Sbjct: 799 ALP 801
Score = 57.4 bits (137), Expect = 5e-08
Identities = 90/323 (27%), Positives = 115/323 (35%), Gaps = 32/323 (9%)
Query: 334 TTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSS-TSNALSWLDE 392
TT L + PAP P + PP P + PP + SS P + S L L
Sbjct: 554 TTPHLETPPCPAPCPLQA-----PPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPS 608
Query: 393 ELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQP--S 450
L LA P P PP + Q L + P A A LLQ S
Sbjct: 609 PPLS-PLATPPPQAPPXLALPPLQAPPSPPASPPLSPLAT-PSPQAPNALAVHLLQAPFS 666
Query: 451 APSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGN 510
P S QAP PP PV P++ P A SL P P PA P +
Sbjct: 667 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL---AAPPLQVPPSPPASP-----PMSP 718
Query: 511 SALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTP---ARPLL---PFSTGPGSPLFQP 564
SA A L + P + P+ P+ TP PLL P P P P
Sbjct: 719 SATPPPQA-PPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLP 777
Query: 565 LSFQSQGSPPKGPELSLASIHVPLESI-KPSSALPVTAYDKNGFRILFHFAKECPPGRPD 623
+S ++ P P L+ PL+++ P ++ P A + PP P
Sbjct: 778 MSPLAKPPPQAPPALATP----PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPP 833
Query: 624 VLVVVVSMLNTAPLPVKSIVLQA 646
VL +L P P S LQA
Sbjct: 834 VL--AAPLLQVPPSPPASPTLQA 854
Score = 50.1 bits (118), Expect = 7e-06
Identities = 80/346 (23%), Positives = 122/346 (35%), Gaps = 57/346 (16%)
Query: 337 SLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLC 396
SL ++ +P TPPS P + PP + P + T+ P ++L+
Sbjct: 353 SLQTLPSPPATPPSQAPPSMTTPPMQAPP--------SLQTIPPIQVPHSLT-------- 396
Query: 397 LGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSS 456
P+ PP A L Q+ SP + +P ++ +S S
Sbjct: 397 ----SPSLQAPPSPLA-------LSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPS 445
Query: 457 SQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHL 516
A PP P P S+PA S T ++PA++P P +H L
Sbjct: 446 RPASTPPDSPPLQAPLSLPA----SPPLQTSLSPAVSPLSSPL------------TIHPL 489
Query: 517 DALDQLLE---EAKVTSGLVKP--TTSPLIPTTTPARPLLPFSTGP--GSPLFQPLSFQS 569
AL L +A ++S ++ P T S L P + P +T P P P Q+
Sbjct: 490 QALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPP-ASLTTPPLENLPSLAPPPLQT 548
Query: 570 QGSPPKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVV 629
+P P L P P S L + A P P + +
Sbjct: 549 ASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPS-----SIATPPPQAPPALASPPL 603
Query: 630 SMLNTAPL-PVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPA 674
L + PL P+ + QA ++ PPS P SP+ P+
Sbjct: 604 QGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPS 649
Score = 47.0 bits (110), Expect = 6e-05
Identities = 84/358 (23%), Positives = 116/358 (32%), Gaps = 39/358 (10%)
Query: 334 TTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSST-SNALSWLDE 392
T ++ +S PA PP+SG PP + + P S +A T P L E
Sbjct: 80 TRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 139
Query: 393 ELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAP 452
E + G A A PK SA ++ + D P PGT + + + S
Sbjct: 140 ETVARGKATEA----PKRSALSA--------GARRDTSGPTPGTPS-----PAMARRSRA 182
Query: 453 SSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSA 512
+ + P P P P P P S S+ + P+ A + P+ G S
Sbjct: 183 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSL 242
Query: 513 LHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGP----GSPLFQPLSFQ 568
L G + P P + L P P +P PLS
Sbjct: 243 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 302
Query: 569 SQGSP-PKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVV 627
+P P G + + P + P LP T A P P
Sbjct: 303 PLATPSPSGTK--ARPVPPPDNAATP---LPATLPPSPPLATPLPLAPPSPSAPPS---- 353
Query: 628 VVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANP 685
L T P P + QA + PPS L PIQ P ++T L A P
Sbjct: 354 ----LQTLPSPPATPPSQAPPSMTTPPMQAPPS---LQTIPPIQVPHSLTSPSLQAPP 404
Score = 42.4 bits (98), Expect = 0.002
Identities = 89/362 (24%), Positives = 130/362 (35%), Gaps = 62/362 (17%)
Query: 354 PILPPPPQASGPPRSRSSSQAEATLGPS-------STSNALSWLDEELLCLG---LADPA 403
P P P GP +S SS+ +T PS S L L L+ PA
Sbjct: 194 PSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA 253
Query: 404 PNVPPKESAGNSQWHLLQREQSDLDFFSP-------RPGTAACGA-SDAPLLQPS----- 450
+ P + H Q + L P + A G S +PL PS
Sbjct: 254 RSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTK 313
Query: 451 ---APSSSSSQAPLP---PPFP--APVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPG 502
P ++ PLP PP P A +P + P+PSA SL + PA P P
Sbjct: 314 ARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPP--- 370
Query: 503 HHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLF 562
++ + +L Q + +V L P+ P + A L +T GSP
Sbjct: 371 ----SMTTPPMQAPPSL-QTIPPIQVPHSLTSPSLQ--APPSPLALSSLQATTSLGSPTL 423
Query: 563 QPL-SFQSQGSPPKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGR 621
Q SF + P+ + SL S P + P + P+ A + P
Sbjct: 424 QATHSFLTMS--PRQTQASLTSPSRPAST--PPDSPPLQA----------PLSLPASPPL 469
Query: 622 PDVLVVVVSMLNTA----PLPVKSIVLQAAVPKSMKVKLQPPSGTE--LSPFSPIQPPAA 675
L VS L++ PL S + + + + PP T+ L+P S PPA+
Sbjct: 470 QTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPAS 529
Query: 676 IT 677
+T
Sbjct: 530 LT 531
Score = 40.0 bits (92), Expect = 0.008
Identities = 80/302 (26%), Positives = 99/302 (32%), Gaps = 73/302 (24%)
Query: 343 APAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSN-------ALSWLD---- 391
A P PS+ P PPP A+ P + S A + PS+T A L
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 392 --EELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASD------ 443
L LA P P PP + Q L + +P +A+ S
Sbjct: 772 PPASLPMSPLAKPPPQAPPALATPPLQ--ALPSPPASFPGQAPFSPSASLPMSPLATPPP 829
Query: 444 -------APLLQ--PSAPSSSSSQAPLPPPFPAP------------VVPASVPAPSAGSS 482
APLLQ PS P+S + QAP PP P P + P P PS S
Sbjct: 830 QAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPS 889
Query: 483 LFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIP 542
+G P + GH A S L D E S P +
Sbjct: 890 STLSG----------PDLAGHSSSA--TSTPEELRGYDSGPEGGAAAS----PPPDAELA 933
Query: 543 TTTPA------RPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSA 596
PA P L F PG+PL P P GP S + E+ P SA
Sbjct: 934 ACHPAAWSRGPAPPLAFRGAPGAPLPWP--------PATGPG-SADGLCTIYETEGPESA 984
Query: 597 LP 598
P
Sbjct: 985 TP 986
Score = 32.7 bits (73), Expect = 1.2
Identities = 55/205 (26%), Positives = 70/205 (34%), Gaps = 34/205 (16%)
Query: 338 LSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCL 397
L+ LAP P PP P P SGP + SS A +ST L D
Sbjct: 872 LTLALAPGPPPP----PSRSPSSTLSGPDLAGHSSSA------TSTPEELRGYDSGPEGG 921
Query: 398 GLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSS 457
A P P+ + + W P P A GA APL P A S+
Sbjct: 922 AAASPPPDA-ELAACHPAAWSR-----------GPAPPLAFRGAPGAPLPWPPATGPGSA 969
Query: 458 QA----------PLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGL- 506
P P + P P S G + G A A + + A G L
Sbjct: 970 DGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG-AGASSRSPKQARLGELPLG 1028
Query: 507 ALGNSALHHLDALDQLLEEAKVTSG 531
AL S + HL + LL A+ +G
Sbjct: 1029 ALQASVVQHLLSRTLLLAAAEGAAG 1053
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 57.4 bits (137), Expect = 5e-08
Identities = 103/361 (28%), Positives = 134/361 (37%), Gaps = 81/361 (22%)
Query: 365 PPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQ 424
P RSR + A S + L L LGL P P S + ++LL
Sbjct: 384 PRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPGP------SHSDGSFNLLGS-- 435
Query: 425 SDLDFFSPRPGTAACGASDAPL--LQPSAPSSSSSQ------APLPPPFP-APVVPASV- 474
D P P T + G+ P +QPS P ++S AP PP APVVP+ V
Sbjct: 436 ---DAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVPSPVL 492
Query: 475 PAPSAGSSLFSTGVAPALAP----KVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTS 530
+PS G + G A L P + P GLAL + +L +
Sbjct: 493 QSPSEGLGM-GAGPACPLPPLAGGEAFPFPSPEQGLALSGAGF------PGMLGALPLPL 545
Query: 531 GLVKPTTSPLIPTTT-----------PARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPEL 579
L +P SPL+ + P PLLP GPG PL P+GP L
Sbjct: 546 SLGQPPPSPLLNHSLFGVLTGGGGQPPPEPLLPPPGGPGPPL--------APGEPEGPSL 597
Query: 580 SLASIHVP----------------LESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPD 623
+AS+ P L S P AL TA D G P G P
Sbjct: 598 LVASLLPPPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSA----EGAGGPSGEPF 653
Query: 624 VLVVVVSMLNTAPL--PVKSIVLQAAVPKSMKVKLQPPSGTE-----LSPFSPIQPPAAI 676
+ +S L PL P I L +A+ + L PPSGT LS P P +++
Sbjct: 654 SGLGDLSPLLFPPLSAPPTLIALNSAL---LAATLDPPSGTPPQPCVLSAPQPGPPTSSV 710
Query: 677 T 677
T
Sbjct: 711 T 711
Score = 47.0 bits (110), Expect = 6e-05
Identities = 66/276 (23%), Positives = 96/276 (34%), Gaps = 45/276 (16%)
Query: 339 SSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTS------NALSWLDE 392
S L P P PPS+ +P P P AS PP S ++ LGP + A +L
Sbjct: 264 SDALTPPPLPPSNNLPAHPGP--ASQPPVSSATMHLPLVLGPLGGAPTVEGPGAPPFLAS 321
Query: 393 ELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQ---P 449
LL P +PP + + S P + LL+ P
Sbjct: 322 SLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGP 381
Query: 450 SAPSSSSSQAPLPPPFP-------APVVPA-------SVPAPSAGSSLF----------- 484
P S +AP P P P P++P+ P PS F
Sbjct: 382 QTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPGPSHSDGSFNLLGSDAHLPP 441
Query: 485 ----STGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPL 540
S+G P ++P++PG +L S++ A + V S +++ + L
Sbjct: 442 PPTLSSGSPPQPRHPIQPSLPGTTSGSL--SSVPGAPAPPAASKAPVVPSPVLQSPSEGL 499
Query: 541 IPTTTPARPLLPFSTGPGSPLFQP---LSFQSQGSP 573
PA PL P + G P P L+ G P
Sbjct: 500 GMGAGPACPLPPLAGGEAFPFPSPEQGLALSGAGFP 535
Score = 41.2 bits (95), Expect = 0.003
Identities = 69/263 (26%), Positives = 86/263 (32%), Gaps = 45/263 (17%)
Query: 340 SVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPS------------------ 381
S L P P+ P S + P A GP AE GPS
Sbjct: 608 SDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDLSPLLFPPL 667
Query: 382 STSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGA 441
S L L+ LL L DP PP+ +P+PG
Sbjct: 668 SAPPTLIALNSALLAATL-DPPSGTPPQPCV----------------LSAPQPGPPTSSV 710
Query: 442 SDAPLLQPSAPS--SSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPA 499
+ A P A S + S + PP +P++ AS+ S S G P+L P
Sbjct: 711 TTA-TTDPGASSLGKAPSNSGRPPQLLSPLLGASL-LGDLSSLTSSPGALPSLLQPPGPL 768
Query: 500 VPGHHGLAL--GNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGP 557
+ G GL L G A L L A + L P P P P P P
Sbjct: 769 LSGQLGLQLLPGGGAPPPLSEASSPL--ACLLQSLQIPPEQPEAPCLPPESPASALEPEP 826
Query: 558 GSPLFQPLSFQSQGSP-PKGPEL 579
P L+ GSP P PEL
Sbjct: 827 ARPPLSALA-PPHGSPDPPVPEL 848
Score = 38.1 bits (87), Expect = 0.029
Identities = 57/226 (25%), Positives = 79/226 (34%), Gaps = 32/226 (14%)
Query: 400 ADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQ- 458
A P VPP L S F P A G P L PS SS
Sbjct: 145 ARPPCRVPPTTPLNGGPGSLPPEPPSVSQAF---PTLAGPGGLFPPRLADPVPSGGSSSP 201
Query: 459 -------APLPPPFPAPVVPASVPAPSAGSSLFSTGVAPAL----APKVEPAVPGHHGLA 507
AP P P P P + + P+ + G++L S+ V L AP + P L
Sbjct: 202 RFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPPL- 260
Query: 508 LGNSALHHLDAL-DQLLEEAKVTSGLVKPTTSPLIPTTTPARPLL-------PFSTGPGS 559
H DAL L + P + P + + T PL+ P GPG+
Sbjct: 261 -----FHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPGA 315
Query: 560 PLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVTAYDKN 605
P F S S + + P L S L+ +P + P ++ +
Sbjct: 316 PPFLASSLLSAAAKAQHPPLPPPS---TLQGRRPRAQAPSASHSSS 358
Score = 35.4 bits (80), Expect = 0.19
Identities = 77/280 (27%), Positives = 92/280 (32%), Gaps = 60/280 (21%)
Query: 354 PILPPP-----PQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPP 408
P+LPPP P A G P S A+L P S+ L P P+ PP
Sbjct: 575 PLLPPPGGPGPPLAPGEPEG--PSLLVASLLPPPPSDLL--------------PPPSAPP 618
Query: 409 KESAGNSQWHLLQREQSDLDFFSPRPGTAA------CGASD-APLLQP--SAP------S 453
S LL + D G G D +PLL P SAP +
Sbjct: 619 SNLLA-SFLPLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDLSPLLFPPLSAPPTLIALN 677
Query: 454 SSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSAL 513
S+ A L PP P P + AP G S A PG L S
Sbjct: 678 SALLAATLDPPSGTPPQPCVLSAPQPGPPTSSVTTATT--------DPGASSLGKAPSNS 729
Query: 514 HHLDALDQLLEEAKVTSGLVKPTTSP--LIPTTTPARPLLPFSTG----PGSPLFQPLS- 566
L L A + L T+SP L P PLL G PG PLS
Sbjct: 730 GRPPQLLSPLLGASLLGDLSSLTSSPGALPSLLQPPGPLLSGQLGLQLLPGGGAPPPLSE 789
Query: 567 --------FQSQGSPPKGPELSLASIHVPLESIKPSSALP 598
QS PP+ PE P +++P A P
Sbjct: 790 ASSPLACLLQSLQIPPEQPEAPCLPPESPASALEPEPARP 829
Score = 32.3 bits (72), Expect = 1.6
Identities = 43/165 (26%), Positives = 56/165 (33%), Gaps = 31/165 (18%)
Query: 343 APAPTPPSSGIPILPPPPQASG----------PPRSRSSSQAEATLGPSSTSNALSWLDE 392
AP P PP+S + P AS PP+ S + LG S+ +
Sbjct: 700 APQPGPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASLLGDLSSLTSSPGALP 759
Query: 393 ELLC---------LGLAD-PAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGAS 442
LL LGL P PP S +S L + L +P
Sbjct: 760 SLLQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLACLLQS---LQIPPEQP-------- 808
Query: 443 DAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTG 487
+AP L P +P+S+ P PP A P P P L G
Sbjct: 809 EAPCLPPESPASALEPEPARPPLSALAPPHGSPDPPVPELLTGRG 853
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 53.5 bits (127), Expect = 7e-07
Identities = 75/271 (27%), Positives = 97/271 (35%), Gaps = 37/271 (13%)
Query: 337 SLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLC 396
S S + P+P+ P S P PP Q P + SQA +LG + S+L L
Sbjct: 291 SSSPLATPSPSAPPS--PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLS 348
Query: 397 LGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQP--SAPSS 454
LA P P PP + Q L + P A A LLQ S P S
Sbjct: 349 -PLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT-PSPQAPNALAVHLLQAPFSPPPS 406
Query: 455 SSSQAPLPPPFPAPVVPASVPAPSAGSSLF--------STGVAPALAPKVEPAVPGHHGL 506
QAP PP PV P++ P A SL S +P ++P P L
Sbjct: 407 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL 466
Query: 507 ALGNSALHHLDALDQLLEEAKVTSGLVKPTTS--PLIPTTTPAR-PLLPFSTGPGSPLFQ 563
A L + L P P P + P + P P ++ P SPL
Sbjct: 467 A--------APPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLAT 518
Query: 564 PLSFQSQGSPPKGPELSLASIHVPLESIKPS 594
P PP+ P + A PL + PS
Sbjct: 519 P--------PPQAPPVLAA----PLLQVPPS 537
Score = 48.5 bits (114), Expect = 2e-05
Identities = 75/273 (27%), Positives = 94/273 (34%), Gaps = 52/273 (19%)
Query: 346 PTPPSSGIPILPPPPQAS-----GPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLA 400
P+PP S P+ PPPQA P ++ S A L P LA
Sbjct: 343 PSPPLS--PLATPPPQAPPALALPPLQAPPSPPASPPLSP------------------LA 382
Query: 401 DPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSS-SSQA 459
P+P P + HLLQ FSP P P P +PS++ SQA
Sbjct: 383 TPSPQAPNALAV-----HLLQAP------FSPPPSPPVQAPFSPPASPPVSPSATPPSQA 431
Query: 460 P---LPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHG-LALGNSALHH 515
P PP P P + P S ++ P AP ++ A P AL L
Sbjct: 432 PPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQA 491
Query: 516 LDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLL--PFSTGPGSPLFQPLSFQSQGSP 573
L + S SPL A P+L P P SP P + P
Sbjct: 492 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 551
Query: 574 PKGPE---------LSLASIHVPLESIKPSSAL 597
GP+ L+LA P S PSS L
Sbjct: 552 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL 584
Score = 46.6 bits (109), Expect = 8e-05
Identities = 79/293 (26%), Positives = 99/293 (33%), Gaps = 65/293 (22%)
Query: 339 SSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLG 398
S ++P+ TPPS P L PP P S A + PS+T + L
Sbjct: 418 SPPVSPSATPPSQAPPSLAAPPLQVPP-----SPPASPPMSPSATPPPQAPPPLAAPPLQ 472
Query: 399 LADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASD-------------AP 445
LA P P PP + Q L + +P +A+ S AP
Sbjct: 473 LAKPPPQAPPALATPPLQ--ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP 530
Query: 446 LLQ--PSAPSSSSSQAPLPPPFPAP------------VVPASVPAPSAGSSLFSTGVAPA 491
LLQ PS P+S + QAP PP P P + P P PS S +G
Sbjct: 531 LLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSG---- 586
Query: 492 LAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPA---- 547
P + GH A S L D E S P + PA
Sbjct: 587 ------PDLAGHSSSA--TSTPEELRGYDSGPEGGAAAS----PPPDAELAACHPAAWSR 634
Query: 548 --RPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALP 598
P L F PG+PL P P GP S + E+ P SA P
Sbjct: 635 GPAPPLAFRGAPGAPLPWP--------PATGPG-SADGLCTIYETEGPESATP 678
Score = 42.0 bits (97), Expect = 0.002
Identities = 83/343 (24%), Positives = 110/343 (32%), Gaps = 64/343 (18%)
Query: 354 PILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAG 413
P P P GP +S SS+ +T +P+P + SAG
Sbjct: 185 PSARPRPPTEGPRKSVSSASEHST----------------------TEPSPAARRRPSAG 222
Query: 414 NSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPAS 473
LQR P + + +S PL P+ S+ P P P+ P
Sbjct: 223 GG----LQR-----------PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG 267
Query: 474 VPA---PSAGSSLFSTGVAPALAP-KVEPAVPGHHGLALGNSALHHLDALDQ--LLEEAK 527
+ A P APAL P P SA L L ++
Sbjct: 268 LQALRPPQVTPP--RKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQ 325
Query: 528 VTSGLVKPTTSPLIPTTTPARPLLPFSTGP--GSPLFQPLSFQSQGSPPKGPELSLASIH 585
T+ L PT + P+ PL P +T P P Q+ SPP P LS
Sbjct: 326 ATTSLGSPTLQ-ATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLS----- 379
Query: 586 VPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQ 645
PL + P + N + A PP P V S + P+ +
Sbjct: 380 -PLATPSPQA--------PNALAVHLLQAPFSPPPSPPV-QAPFSPPASPPVSPSATPPS 429
Query: 646 AAVPKSMKVKLQ-PPSGTELSPFSPIQPPAAITQVMLLANPLK 687
A P LQ PPS P SP P L A PL+
Sbjct: 430 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 472
Score = 40.4 bits (93), Expect = 0.006
Identities = 75/339 (22%), Positives = 108/339 (31%), Gaps = 50/339 (14%)
Query: 348 PPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSST-SNALSWLDEELLCLGLADPAPNV 406
PP+SG PP + + P S +A T P L EE + G A A
Sbjct: 85 PPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEA--- 141
Query: 407 PPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFP 466
PK SA ++ + D P PGT + + + S + + P P P
Sbjct: 142 -PKRSALSA--------GARRDTSGPTPGTPS-----PAMARRSRAAGTEVGLPRPAPSA 187
Query: 467 APVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEA 526
P P P S S+ + P+ A + P+ G S L
Sbjct: 188 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG 247
Query: 527 KVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHV 586
G + P P + L P P + +P GP LS + +
Sbjct: 248 PSARGTPRAPAHPSQPKPKGLQALRPPQVTPP---------RKDAAPALGP-LSSSPLAT 297
Query: 587 PLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRP----------DVLVVVVSMLNTAP 636
P S PS + P + PP P L S L + P
Sbjct: 298 PSPSAPPSPSAPPSLQ-----------TLPSPPATPPSQATTSLGSPTLQATHSFLPSPP 346
Query: 637 L-PVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPA 674
L P+ + QA ++ PPS P SP+ P+
Sbjct: 347 LSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPS 385
Score = 32.7 bits (73), Expect = 1.2
Identities = 55/205 (26%), Positives = 70/205 (34%), Gaps = 34/205 (16%)
Query: 338 LSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCL 397
L+ LAP P PP P P SGP + SS A +ST L D
Sbjct: 564 LTLALAPGPPPP----PSRSPSSTLSGPDLAGHSSSA------TSTPEELRGYDSGPEGG 613
Query: 398 GLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSS 457
A P P+ + + W P P A GA APL P A S+
Sbjct: 614 AAASPPPDA-ELAACHPAAWSR-----------GPAPPLAFRGAPGAPLPWPPATGPGSA 661
Query: 458 QA----------PLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGL- 506
P P + P P S G + G A A + + A G L
Sbjct: 662 DGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG-AGASSRSPKQARLGELPLG 720
Query: 507 ALGNSALHHLDALDQLLEEAKVTSG 531
AL S + HL + LL A+ +G
Sbjct: 721 ALQASVVQHLLSRTLLLAAAEGAAG 745
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 53.5 bits (127), Expect = 7e-07
Identities = 83/334 (24%), Positives = 131/334 (39%), Gaps = 45/334 (13%)
Query: 283 SDNLSRVINSYKTIIEGQVINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVL 342
S L R + ++EG ++ E + L D + + + GTL +S
Sbjct: 474 SGTLERKRPASMAVMEGDLVKKESFGVKLMDFQAHRR---GGTL-------NRKHISPAF 523
Query: 343 APAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADP 402
P P PP+ G ++P P+ PP+ SS+AE++ G + ++ L++ P
Sbjct: 524 QP-PLPPTDGSTVVPAGPEP--PPQ---SSRAESSSGGGTVPSSAGILEQG------PSP 571
Query: 403 APNVPPK-ESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQP---SAPSSSSSQ 458
PPK + ++ R S + +P AA G+ + QP + PS + +
Sbjct: 572 GDGSPPKPKDPVSAAVPAPGRNNSQIASGQNQP-QAAAGSHQLSMGQPHNAAGPSPHTLR 630
Query: 459 APLPPPFPAPVVPASVPA--PSAGSSLFSTGVAPALAPKVEPAVPG----HHGLALGNSA 512
+ P PAP P + P P SS ++ P+L+PK P H G G +
Sbjct: 631 RAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPS 690
Query: 513 LHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTP---ARPLL---PFSTGPGSPLFQPLS 566
A QL + +S L P +P P P A PL+ P S GP +P+ P
Sbjct: 691 -----APSQLSAPRRYSSSL-SPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSE 744
Query: 567 FQSQGSPPKGPELSLASIHVPLESIKPSSALPVT 600
+ P+ PL PS P T
Sbjct: 745 HGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQT 778
Score = 37.4 bits (85), Expect = 0.049
Identities = 38/156 (24%), Positives = 51/156 (32%), Gaps = 38/156 (24%)
Query: 335 TNSLSSVLAP---APTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLD 391
++SLS + AP P PP+ P++ P + GPP + PS T
Sbjct: 702 SSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQ----- 756
Query: 392 EELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSA 451
P+ PP L ++ L P P T A G P
Sbjct: 757 --------TPTPPSTPP-----------LGKQNPSL----PAPQTLAGG-------NPET 786
Query: 452 PSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTG 487
+ P P P P P SVP P + S G
Sbjct: 787 AQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAG 822
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 53.1 bits (126), Expect = 9e-07
Identities = 90/378 (23%), Positives = 126/378 (33%), Gaps = 71/378 (18%)
Query: 344 PAPTPPSSGIPILPPPPQ------ASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCL 397
PA TPPS + PPP+ A+ PP + + G +T A +
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG---- 1207
Query: 398 GLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSS 457
GLA P+P P A SP+ G A AP + P S
Sbjct: 1208 GLATPSPKGAPTTPAATPP--------------SPKGGLATPSPKGAPTTPAATPPSPKG 1253
Query: 458 QAPLPPPFPAPVVPASVPAPSAGSSLF--------STGVAPALAPKVEPAVPGHHGLALG 509
PPP AP PA+ P PS L + V +PK PA G
Sbjct: 1254 GPATPPPKGAPTPPAATP-PSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTP 1312
Query: 510 NSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTP----ARPLLPFST-----GPGSP 560
+A K + G P +P P TP P LP +T GP +P
Sbjct: 1313 PAATP---------PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTP 1363
Query: 561 LFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECP-- 618
S + +PP + S K A+P D ++ K+ P
Sbjct: 1364 -----SSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPAT 1418
Query: 619 ---------PGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSP 669
P + D+ V+ ++ P S S K P+ ++P SP
Sbjct: 1419 PVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSK---GDPTLPAVTPPSP 1475
Query: 670 IQPPAAITQVMLLANPLK 687
+PPA QV ++P K
Sbjct: 1476 KEPPAP-KQVATSSSPKK 1492
Score = 49.7 bits (117), Expect = 1e-05
Identities = 85/355 (23%), Positives = 109/355 (30%), Gaps = 63/355 (17%)
Query: 332 LDTTNSLSSVLAPAPTPPS-SGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWL 390
L T + + PA TPPS G P PPP A PP + P S L+
Sbjct: 1232 LATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAAT----------PPSLKGGLATP 1281
Query: 391 DEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPS 450
+ G +PA PP SP+ G A AP +
Sbjct: 1282 PHK----GAPNPAVVTPP----------------------SPKGGPATSPPKGAPTPPAA 1315
Query: 451 APSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAP--KVEPAVP-GHHGLA 507
P S PPP AP PA P G T PA P K P P G
Sbjct: 1316 TPPSPKGSPGTPPPKGAPTPPAVTPPSPKG-----TPTLPATTPSSKGGPTTPSSKEGPT 1370
Query: 508 LGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPLSF 567
+ H K + P P P P P +T P++
Sbjct: 1371 PPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPAT--------PVTR 1422
Query: 568 QSQGSPPKGPELSLASIHVPLESIKPSS------ALPVTAYDKNGFRILFHFAKECPPGR 621
+ +P KG A V L+ +S A P + D + KE P +
Sbjct: 1423 EGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPK 1482
Query: 622 PDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAI 676
P P+ + L A +P S K PS S PI P A +
Sbjct: 1483 QVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPS----SRRDPIAPTATL 1533
Score = 44.7 bits (104), Expect = 3e-04
Identities = 83/353 (23%), Positives = 123/353 (34%), Gaps = 77/353 (21%)
Query: 334 TTNSLSSVLAPAPTPPSSGIPILPPPPQASGP----PRSRSSSQAEATLGPSSTSNALSW 389
T +S PA TP G P + PP GP P+ +S A L P
Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKA------ 1415
Query: 390 LDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDF------FSPRPGTAACGASD 443
PA V + +A S+ L + + +P+ G A +
Sbjct: 1416 ------------PATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKG 1463
Query: 444 APLL---------QPSAP-----SSSSSQAP-LPPPFPAPVVPASVPAPSAGSSLFSTGV 488
P L +P AP SSS +AP P P AP +PA +P+
Sbjct: 1464 DPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPS------------ 1511
Query: 489 APALAPKVEPAVPGHHGLALGNSA--LHHLDALDQLLEEAKVTSGLV--KPTTSPLIPT- 543
+PK PA P + +A L +EA + + P +P IPT
Sbjct: 1512 ----SPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTP 1567
Query: 544 -TTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVTAY 602
PA P ++ P P P +++ SP + + P E+ P + P +
Sbjct: 1568 KEAPATPSSKEASSP--PAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSP- 1624
Query: 603 DKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIV--LQAAVPKSMK 653
+K A P G P V S L +P S+ + A VP++ K
Sbjct: 1625 EKGP-------ATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASK 1670
Score = 44.3 bits (103), Expect = 4e-04
Identities = 62/233 (26%), Positives = 77/233 (33%), Gaps = 54/233 (23%)
Query: 344 PAPTPPS-SGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADP 402
PA TPPS G P P P A PP A PS GLA P
Sbjct: 1083 PAATPPSPKGGPATPSPKGAPMPP---------AATPPSPKG-------------GLATP 1120
Query: 403 APNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLP 462
P A SP+ G A AP + P S P
Sbjct: 1121 PHKGAPTTPAATPP--------------SPKGGLATPPPKGAPTTPAATPPSPKGGLATP 1166
Query: 463 PPFPAPVVPASV-PAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQ 521
PP AP PA+ P+P G + S AP P+ G GLA +
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG--GLATPSP---------- 1214
Query: 522 LLEEAKVTSGLVKPTTSPLIPTTTP-ARPLLPFSTGPGSPLFQPLSFQSQGSP 573
+ A T P+ + T +P P P +T P SP P + +G+P
Sbjct: 1215 --KGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT-PPSPKGGPATPPPKGAP 1264
Score = 42.7 bits (99), Expect = 0.001
Identities = 78/341 (22%), Positives = 104/341 (30%), Gaps = 68/341 (19%)
Query: 344 PAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPA 403
PA TP S G P P + PP + S + + P S G A P+
Sbjct: 1350 PATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKR------------GPAIPS 1397
Query: 404 PN----------VPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPS 453
P + PK++ S D P + + A P+
Sbjct: 1398 PKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPA 1457
Query: 454 SSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSAL 513
+ SS+ P P P PAP VA + +PK PA P G
Sbjct: 1458 TPSSKGDPTLPAVTPPSPKEPPAPKQ--------VATSSSPKKAPATPAPMGAPT----- 1504
Query: 514 HHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSP 573
L A+ + K P+ PT T P + P L P + SP
Sbjct: 1505 --LPAV--IPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPA--MTVPSP 1558
Query: 574 PKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLN 633
K P +I P E+ P T K PP V S
Sbjct: 1559 KKTP-----AIPTPKEA-------PATPSSKEA---------SSPPA------VTPSTYK 1591
Query: 634 TAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPA 674
AP P + ++ A S K PP+ T SP PA
Sbjct: 1592 GAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPA 1632
Score = 40.4 bits (93), Expect = 0.006
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 45/218 (20%)
Query: 449 PSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLAL 508
P APS ++ APL AP +P SVP+PS + PA P V G
Sbjct: 709 PVAPSPQNTCAPLATLVLAPEIPKSVPSPS---------LPPAGTPPGTKKVDG------ 753
Query: 509 GNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPLSFQ 568
+ H AL + K PT T ++ L + SPL +S Q
Sbjct: 754 ----ISHTSALAPVASSPKEC-----PTEDSGASATASSKGTLTYLADSPSPLGVSVSPQ 804
Query: 569 SQGSPPK----GPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDV 624
++ P K GP+ + ++ P+ ++ +S LP + + F +K+ P
Sbjct: 805 TKRPPTKKGSAGPDTPIGNLSSPVSPVE-ASFLPENS-------LSFQGSKDSP------ 850
Query: 625 LVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGT 662
+ T P P + A P S K PP T
Sbjct: 851 ---ATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKET 885
Score = 39.3 bits (90), Expect = 0.013
Identities = 81/371 (21%), Positives = 127/371 (34%), Gaps = 55/371 (14%)
Query: 325 TLIDLAELDTTNSLSSVLAPAPTPPS-SGIPILPPPPQASGPPRSRSSSQAEATLGPSST 383
TL+ T +++ PA T PS P +P P +A P S+ +S A PS+
Sbjct: 1532 TLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVT-PSTY 1590
Query: 384 SNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASD 443
A S E L+ + P+P P A SP G A
Sbjct: 1591 KGAPS-PKELLIPPAVTSPSPKEAPTPPAVTPP--------------SPEKGPATPAPKG 1635
Query: 444 APLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAG-------SSLFSTGVAPALAPKV 496
P P PSS +P P + A+VP S G ++L VAPA P+
Sbjct: 1636 TPTSPPVTPSSLKD-SPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPA--PES 1692
Query: 497 EPAV--PGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTT---------- 544
P + P G S+ + L +PL+P
Sbjct: 1693 TPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGK 1752
Query: 545 ----TPARPLLPFSTGPGSPLFQ-------PLSFQSQGSPPKGPELSLASIHVPLESIKP 593
+P PL P + +PL P + S P +SL P+ ++ P
Sbjct: 1753 DASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPP 1812
Query: 594 SSA-LPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSM 652
LP + G + P ++L ++ + +P +S+++ PKS
Sbjct: 1813 KQQFLPSSP----GLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSA 1868
Query: 653 KVKLQPPSGTE 663
+ + PS +
Sbjct: 1869 GIPVPTPSAKQ 1879
Score = 38.5 bits (88), Expect = 0.022
Identities = 96/432 (22%), Positives = 145/432 (33%), Gaps = 90/432 (20%)
Query: 289 VINSYKTIIEGQVINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAP-APT 347
V+ + TI EVAT P ++ ++ T+ + V+AP AP
Sbjct: 442 VVTNPCTIAAAPTTTFEVATCVSPPMSSGP----------ISNIEPTSPAALVMAPVAPK 491
Query: 348 PPSSG------IPILPPPPQASGP-----------PRSRSSSQAEATL--GPSSTSNALS 388
PS+ IP+ PP P P + A+L P S + A
Sbjct: 492 EPSTQVATTLRIPVSPPLPDPEDLKNLPSSVLVKFPTQKDLQTVPASLEGAPFSPAQAGL 551
Query: 389 WLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDL---DFFSPRPGTAACGASDAP 445
++ L L AP P + +S + ++ L P P + +P
Sbjct: 552 TTKKDPTVLPLVQAAPKNSPSFQSTSSSPEIPLSPEATLAKKSLGEPLPIGKPASSMTSP 611
Query: 446 LLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGS----SLFSTGVAPALAP------- 494
L S+ S + + P P++ +S+ P+ + S GVAP A
Sbjct: 612 LGVNSSASVIKTDSYAGPDSAGPLLKSSLITPTVAAFPLESADPAGVAPTTAKGTSTYTT 671
Query: 495 KVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFS 554
P + G LA N V G + TT PL+PT + P+ P
Sbjct: 672 TASPFLEGTVSLAPKNHP---------------VKEGTL--TTLPLVPTASENCPVAPSP 714
Query: 555 TGPGSPLFQ-------PLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVTAYDKNGF 607
+PL P S S PP G + + I +SAL A
Sbjct: 715 QNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKV----DGISHTSALAPVASS---- 766
Query: 608 RILFHFAKECPPGRPDVLVV-----VVSMLNTAPLPV-KSIVLQAAVPKSMKVKLQP--P 659
KECP ++ L +P P+ S+ Q P + K P P
Sbjct: 767 ------PKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTP 820
Query: 660 SGTELSPFSPIQ 671
G SP SP++
Sbjct: 821 IGNLSSPVSPVE 832
Score = 37.7 bits (86), Expect = 0.038
Identities = 84/341 (24%), Positives = 107/341 (31%), Gaps = 61/341 (17%)
Query: 342 LAPAPTPPSSGI--------PILPPPPQASGPPRSRSS-SQAEATLGPSSTSNALSWLDE 392
L P TP S + P P P QA + SS +A AT P
Sbjct: 880 LPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIP-------- 931
Query: 393 ELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAP 452
A P+P P A SP+ G A AP + P
Sbjct: 932 -------ASPSPKGAPTPPAATPP--------------SPKGGPATPSPKWAPTPPAATP 970
Query: 453 SSSSSQAPLPPPFPAPVVPASV-PAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNS 511
S P P AP PA+ P+P G + S AP P V P P G+
Sbjct: 971 PSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT-PPAVTPPSP------KGSP 1023
Query: 512 ALHHLDALDQLLEEAKVTSGLVKPTTSPLI--PTTTPARPLLPFSTGPGSPLFQPLSFQS 569
A A S P +PL TTPA L GP +P +
Sbjct: 1024 AATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPP 1083
Query: 570 QGSP--PKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVV 627
+P PKG + + P+ P +A P + K G H + P P
Sbjct: 1084 AATPPSPKGGPATPSPKGAPM----PPAATPPS--PKGGLATPPH---KGAPTTPAATPP 1134
Query: 628 VVSMLNTAPLPVKSIVLQAAVPKSMK--VKLQPPSGTELSP 666
P P + AA P S K + PP G +P
Sbjct: 1135 SPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTP 1175
Score = 37.4 bits (85), Expect = 0.049
Identities = 62/277 (22%), Positives = 96/277 (34%), Gaps = 39/277 (14%)
Query: 421 QREQSDLDFFSPRPGTAACGASDAPLLQPSAP-------SSSSSQAPLPPPFPAPVVPAS 473
Q E + L S TAA G L P +P S+++ +P P P P
Sbjct: 20 QAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLE 79
Query: 474 VPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLV 533
VP P + S T + AP+ +P G + +AL + S ++
Sbjct: 80 VPFPQSSS---GTALPLGTAPEAPTFLPNLIGPPISPAAL-------------ALASPMI 123
Query: 534 KPTTSPLIPTTTPARPLLPFSTGP----GSPLFQPLSFQSQGSPPKGPELSLASIHVPLE 589
PT L T + + PL + P S F P S S S+ ++ P+
Sbjct: 124 APT---LKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIA 180
Query: 590 SIK--------PSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKS 641
+ PS +P + I+ C + V S+ T P +
Sbjct: 181 PSEPKTNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLA 240
Query: 642 IVL-QAAVPKSMKVKLQPPSGTELSPFSPIQPPAAIT 677
I Q V + P + LS P+ PPAA++
Sbjct: 241 IASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALS 277
Score = 36.6 bits (83), Expect = 0.084
Identities = 85/402 (21%), Positives = 140/402 (34%), Gaps = 73/402 (18%)
Query: 342 LAPAPTPPSSGIP--ILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELL---- 395
LAP SS P +L PP + S S A + PS L+ + E++
Sbjct: 142 LAPHSVQKSSAFPPNLLTSPPSVA-VAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPK 200
Query: 396 ------CLGLADPAPNVPPKESAGNSQWHLLQREQSD-LDFFSPRPGTAACGASDAPLLQ 448
C+ P V P S + L Q + L SP+ + L+
Sbjct: 201 GTPSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTISSV---LIS 257
Query: 449 PSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLAL 508
P P S S + P+ PP + S+P ++ P P G H L
Sbjct: 258 PQNPGSLSLKGPVSPPAALSLSTQSLPVVTSSQKTAGPNTPPDF-----PISLGSHLAPL 312
Query: 509 GNSALHHLDALDQLLEEAKVTSGLVK-----------------------PTTSPLIPTTT 545
S+ + L Q A ++ VK P+ + ++P T
Sbjct: 313 HQSSFGSVQLLGQTGPSA-LSDPTVKTISVDHSSTGASYPSQRSVIPPLPSRNEVVPATV 371
Query: 546 PARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVTAYDKN 605
A P++ S G ++ GS L++A+ S+ P+++L + K+
Sbjct: 372 AAFPVVAPSVDKGPSTISSITCSPSGS------LNVATSF----SLSPTTSLIL----KS 417
Query: 606 GFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKS---MKVKLQPPSGT 662
+H+ P V + VS + T PL V + AA P + + + PP +
Sbjct: 418 SPNATYHY--------PLVAQMPVSSVGTTPLVVTNPCTIAAAPTTTFEVATCVSPPMSS 469
Query: 663 ELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQL 704
P S I+P + VM P + ++ L + L
Sbjct: 470 --GPISNIEPTSPAALVMAPVAPKEPSTQVATTLRIPVSPPL 509
Score = 36.2 bits (82), Expect = 0.11
Identities = 57/241 (23%), Positives = 85/241 (35%), Gaps = 37/241 (15%)
Query: 337 SLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLC 396
+L VL AP P S+ PI+ P + GP +SS+ + S N
Sbjct: 1680 ALKEVLV-APAPEST--PIITAPTR-KGPQTKKSSATSPPICPDPSAKNGSKGP------ 1729
Query: 397 LGLADPAPNVP-----PKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSA 451
L PAP +P K + G H + + + + P TAA P
Sbjct: 1730 LSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLP-----K 1784
Query: 452 PSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNS 511
P S+S A PP P+ P+ VP + L +P P
Sbjct: 1785 PESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADE------- 1837
Query: 512 ALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQG 571
D L L+ ++ G+ P S L+ TP +P T QP++ ++G
Sbjct: 1838 -----DELLPLIPPEPISGGV--PFQSVLVNMPTPKSAGIPVPTPSAK---QPVTKNNKG 1887
Query: 572 S 572
S
Sbjct: 1888 S 1888
Score = 33.5 bits (75), Expect = 0.71
Identities = 99/385 (25%), Positives = 137/385 (35%), Gaps = 66/385 (17%)
Query: 320 CSNQGTLIDLAELDTTNSLSSVLAPAPTPPSS----GIPILPP-PPQASGPPRSRSS-SQ 373
C+ TL+ E+ + S L PA TPP + GI P AS P + S
Sbjct: 718 CAPLATLVLAPEIPKSVPSPS-LPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSG 776
Query: 374 AEATLGPSSTSNALSWLDEELLCLGLA-DPAPNVPP--KESAG-NSQWHLLQREQSDLDF 429
A AT +S+ L++L + LG++ P PP K SAG ++ L S ++
Sbjct: 777 ASAT---ASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEA 833
Query: 430 -FSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGV 488
F P + G+ D+P +++ +P PP P P PSA + L GV
Sbjct: 834 SFLPENSLSFQGSKDSP---------ATTHSPTPPS------PKGAPTPSAVTPLSPKGV 878
Query: 489 APALAPKVEPAVPGHHGLAL-----GNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPT 543
L PK P P L A AL K P P P+
Sbjct: 879 --TLPPKETP-TPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPS 935
Query: 544 TTPARPLLPFSTGPG--------SPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSS 595
A P P +T P SP + P + PKG + + P + P +
Sbjct: 936 PKGA-PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPS----PKGAPTPPA 990
Query: 596 ALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLN----TAPLPVKSIVLQAAVPKS 651
A P + K G A P G P V P P + AA P S
Sbjct: 991 ATPPS--PKGG------PATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPS 1042
Query: 652 MKVKLQPPSGTELSPFSPIQPPAAI 676
K P+ T L +P P A +
Sbjct: 1043 PK---GSPAATPLPKGAPTTPAATL 1064
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 52.8 bits (125), Expect = 1e-06
Identities = 72/268 (26%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 339 SSVLAPAPTPPSSGIPI--LPPPPQAS--------GPPRSRSSSQAEATLGPSSTSNALS 388
+++ PA P++ P LPP P+A+ G R SSSQ GP S+ +S
Sbjct: 663 AAMTGPAEVGPTTEKPSSHLPPTPRATTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMS 722
Query: 389 WLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQ 448
E LL G PAP PP+E+ H ++R PR + P
Sbjct: 723 RSQEYLLDEG---PAPGTPPREARPGRHGHSIKRASVPPVPGKPRQVLPPGTSHFTPPQT 779
Query: 449 PSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLAL 508
P+ S QA P PAP P P L P ++P+ P P H G A
Sbjct: 780 PTKTRPGSPQALGGPHGPAPATAKVKPTP----QLLPPTERP-MSPRSLPQSPTHRGFAY 834
Query: 509 GNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPFSTG-PGSPLFQPLS- 566
L Q + E +V P P +PT P L P + PG P + S
Sbjct: 835 ---------VLPQPV-EGEVGPAAPGPAPPP-VPTAVPTLCLPPEADAEPGRPKKRAHSL 883
Query: 567 --FQSQGSPPKGPELSLASIHVPLESIK 592
+ + S P+ EL + + P +++
Sbjct: 884 NRYAASDSEPERDELLVPAAAGPYATVQ 911
Score = 37.0 bits (84), Expect = 0.064
Identities = 53/208 (25%), Positives = 76/208 (36%), Gaps = 19/208 (9%)
Query: 401 DPAPNVPPKESAGNSQWHLLQR----EQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSS 456
+ P PP S ++ ++R EQ+ P P A +D L P P
Sbjct: 1158 EAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGE 1217
Query: 457 SQAPLPPPF-PAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHH 515
++ P PP P PV+ + P P S T L P V HG S
Sbjct: 1218 ARKPAKPPVSPKPVL--TQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSP--K 1273
Query: 516 LDALDQLLEEAKVTSGLVKPTTSPLIPTTTPAR-PLLPFSTGPGSPLFQPLSFQSQG-SP 573
+ K +GL + P P +PAR P + PG+P S G SP
Sbjct: 1274 PPPPPTAPKPVKAVAGLPSGSAGP-SPAPSPARQPPAALAKPPGTP-------PSLGASP 1325
Query: 574 PKGPELSLASIHVPLESIKPSSALPVTA 601
K P ++HVP + + ++A A
Sbjct: 1326 AKPPSPGAPALHVPAKPPRAAAAAAAAA 1353
Score = 32.7 bits (73), Expect = 1.2
Identities = 45/178 (25%), Positives = 59/178 (33%), Gaps = 18/178 (10%)
Query: 328 DLAELDTTNSLSSVLAPAPTPPSSGIPILPPP-PQASGPPRSRSSSQAEATLGPSSTSNA 386
DLA L PP S P+L P P+ G P +S+ GP S
Sbjct: 1204 DLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTP--TSKKVPLPGPGSP--- 1258
Query: 387 LSWLDEELLCLGLADP-APNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAP 445
E G P +P PP +A + P P + A
Sbjct: 1259 -----EVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSA---GPSPAPSPARQPPAA 1310
Query: 446 LLQPSAPSSSSSQAPLPPPFP-APVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPG 502
L +P S +P PP P AP + P A ++ + AP P E A PG
Sbjct: 1311 LAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPP--EGASPG 1366
Score = 32.0 bits (71), Expect = 2.1
Identities = 36/158 (22%), Positives = 49/158 (31%), Gaps = 49/158 (31%)
Query: 344 PAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPA 403
P PP + + LPP P PP + A+ + P L P
Sbjct: 1196 PPAEPPPTDLAHLPPLP----PPEGEARKPAKPPVSPKPV---------------LTQPV 1236
Query: 404 PNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPP 463
P + SP P + PL P +P + PP
Sbjct: 1237 PKLQG----------------------SPTP-----TSKKVPLPGPGSPEVKRAHGTPPP 1269
Query: 464 PFPAPVVPASVPAP---SAGSSLFSTGVAPALAPKVEP 498
P P P + P P AG S G +PA +P +P
Sbjct: 1270 VSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQP 1307
Score = 30.0 bits (66), Expect = 7.9
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 13/75 (17%)
Query: 339 SSVLAPAPTPPSSGI-PILPPPPQASG------PPRSRSSSQAEATLGP------SSTSN 385
+++ P TPPS G P PP P A PPR+ +++ A A P S +
Sbjct: 1309 AALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGDS 1368
Query: 386 ALSWLDEELLCLGLA 400
A L+E CL A
Sbjct: 1369 ARQKLEETSACLAAA 1383
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 52.0 bits (123), Expect = 2e-06
Identities = 91/357 (25%), Positives = 120/357 (33%), Gaps = 86/357 (24%)
Query: 335 TNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEEL 394
+ SLSS P +P SG P A G PR+ + G
Sbjct: 239 SRSLSSSATPLSSPARSG-------PSARGTPRAPAHPSQPKPKG--------------- 276
Query: 395 LCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSS 454
L P PP++ A + L S +P P A S AP P+ P S
Sbjct: 277 --LQALRPPQVTPPRKDAAPALGPL-----SSSPLATPSPSAAL--QSQAPPTLPATPHS 327
Query: 455 SSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALH 514
SS L P +P + P+PSA SL + PA P +LG+ L
Sbjct: 328 SSLTCQLATP-----LPLAPPSPSAPPSLQTLPSPPATPPSQATT-------SLGSPTLQ 375
Query: 515 HLDALDQLLEEAKVTSGLVKPTTSPLI---PTTTPARPLLPFSTGPGSPLFQPLSFQSQG 571
S L P SPL P PA L P P P PLS +
Sbjct: 376 ------------ATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATP 423
Query: 572 SPPKGPELSLASIHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSM 631
SP L++ + P P + PV A PP P V
Sbjct: 424 SPQAPNALAVHLLQAP---FSPPPSPPVQ-------------APFSPPASPPV------- 460
Query: 632 LNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFS---PIQPPAAITQVMLLANP 685
+A P ++ AA P ++V PP+ +SP + P PP + LA P
Sbjct: 461 SPSATPPSQAPPSLAAPP--LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 515
Score = 51.6 bits (122), Expect = 3e-06
Identities = 77/274 (28%), Positives = 99/274 (36%), Gaps = 38/274 (13%)
Query: 335 TNSLSSVLA-PAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEE 393
++SL+ LA P P P S P PP Q P + SQA +LG + S+L
Sbjct: 327 SSSLTCQLATPLPLAPPS--PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSP 384
Query: 394 LLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQP--SA 451
L LA P P PP + Q L + P A A LLQ S
Sbjct: 385 PLS-PLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT-PSPQAPNALAVHLLQAPFSP 442
Query: 452 PSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLF--------STGVAPALAPKVEPAVPGH 503
P S QAP PP PV P++ P A SL S +P ++P P
Sbjct: 443 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 502
Query: 504 HGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTS--PLIPTTTPAR-PLLPFSTGPGSP 560
LA L + L P P P + P + P P ++ P SP
Sbjct: 503 PPLA--------APPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 554
Query: 561 LFQPLSFQSQGSPPKGPELSLASIHVPLESIKPS 594
L P PP+ P + A PL + PS
Sbjct: 555 LATP--------PPQAPPVLAA----PLLQVPPS 576
Score = 46.6 bits (109), Expect = 8e-05
Identities = 79/293 (26%), Positives = 99/293 (33%), Gaps = 65/293 (22%)
Query: 339 SSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLG 398
S ++P+ TPPS P L PP P S A + PS+T + L
Sbjct: 457 SPPVSPSATPPSQAPPSLAAPPLQVPP-----SPPASPPMSPSATPPPQAPPPLAAPPLQ 511
Query: 399 LADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASD-------------AP 445
LA P P PP + Q L + +P +A+ S AP
Sbjct: 512 LAKPPPQAPPALATPPLQ--ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP 569
Query: 446 LLQ--PSAPSSSSSQAPLPPPFPAP------------VVPASVPAPSAGSSLFSTGVAPA 491
LLQ PS P+S + QAP PP P P + P P PS S +G
Sbjct: 570 LLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSG---- 625
Query: 492 LAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPA---- 547
P + GH A S L D E S P + PA
Sbjct: 626 ------PDLAGHSSSA--TSTPEELRGYDSGPEGGAAAS----PPPDAELAACHPAAWSR 673
Query: 548 --RPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALP 598
P L F PG+PL P P GP S + E+ P SA P
Sbjct: 674 GPAPPLAFRGAPGAPLPWP--------PATGPG-SADGLCTIYETEGPESATP 717
Score = 43.5 bits (101), Expect = 7e-04
Identities = 93/376 (24%), Positives = 126/376 (33%), Gaps = 66/376 (17%)
Query: 334 TTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSST-SNALSWLDE 392
T ++ +S PA PP+SG PP + + P S +A T P L E
Sbjct: 80 TRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 139
Query: 393 ELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGT---AACGASDAPLLQP 449
E + G A A PK SA ++ + D P PGT A S A +
Sbjct: 140 ETVARGKATEA----PKRSALSA--------GARRDTSGPTPGTPSPAMARRSRAAGTEV 187
Query: 450 SAPSSSSSQAPLPP-PFPAPVV------------PASVPAPSAGSSL---FSTGVAPALA 493
P + S P PP P V PA+ PSAG L S ++ +
Sbjct: 188 GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSAT 247
Query: 494 PKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARPLLPF 553
P PA G + H + K L P +P P A L P
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQ------PKPKGLQALRPPQVTP--PRKDAAPALGPL 299
Query: 554 STGPGSPLFQPLSFQSQGSP--PKGPELS--LASIHVPLESIKPSSALPVTAYDKNGFRI 609
S+ P + + QSQ P P P S + PL PS + P +
Sbjct: 300 SSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQ------- 352
Query: 610 LFHFAKECPPGRP----------DVLVVVVSMLNTAPL-PVKSIVLQAAVPKSMKVKLQP 658
PP P L S L + PL P+ + QA ++ P
Sbjct: 353 ----TLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAP 408
Query: 659 PSGTELSPFSPIQPPA 674
PS P SP+ P+
Sbjct: 409 PSPPASPPLSPLATPS 424
Score = 32.7 bits (73), Expect = 1.2
Identities = 55/205 (26%), Positives = 70/205 (34%), Gaps = 34/205 (16%)
Query: 338 LSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCL 397
L+ LAP P PP P P SGP + SS A +ST L D
Sbjct: 603 LTLALAPGPPPP----PSRSPSSTLSGPDLAGHSSSA------TSTPEELRGYDSGPEGG 652
Query: 398 GLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSS 457
A P P+ + + W P P A GA APL P A S+
Sbjct: 653 AAASPPPDA-ELAACHPAAWSR-----------GPAPPLAFRGAPGAPLPWPPATGPGSA 700
Query: 458 QA----------PLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGL- 506
P P + P P S G + G A A + + A G L
Sbjct: 701 DGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG-AGASSRSPKQARLGELPLG 759
Query: 507 ALGNSALHHLDALDQLLEEAKVTSG 531
AL S + HL + LL A+ +G
Sbjct: 760 ALQASVVQHLLSRTLLLAAAEGAAG 784
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 51.6 bits (122), Expect = 3e-06
Identities = 71/289 (24%), Positives = 105/289 (36%), Gaps = 27/289 (9%)
Query: 330 AELDTTNSLSSVLAPAPTP--PSSGIPILPPP-----PQASGPPRSRSSSQAEATLGPSS 382
A + T +S A PTP P+S +PPP P A+ P +S A A P
Sbjct: 1005 AAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEE 1064
Query: 383 TSNALSWLD--EELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACG 440
++ + + EE A P P P +A E + P P A
Sbjct: 1065 PTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPT----PEEPTSPAAAVPTPEEPASP 1120
Query: 441 ASDAPLLQPSAPSSSSSQAPLP--PPFPAPVVP---------ASVPAPSAGSSLFSTGVA 489
A+ P P P+S ++ P P P FPAP VP +VP P +S +
Sbjct: 1121 AAAVPT--PEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPT 1178
Query: 490 PALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLIPTTTPARP 549
PA + V +++ A+ LEE + V + P + P
Sbjct: 1179 PAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNP 1238
Query: 550 LLPFSTGPGSP-LFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSAL 597
P S P L +P S + P+ AS+ P E P++A+
Sbjct: 1239 EEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAV 1287
Score = 32.7 bits (73), Expect = 1.2
Identities = 45/179 (25%), Positives = 65/179 (36%), Gaps = 22/179 (12%)
Query: 333 DTTNSLSSVLAPAP--------TPPSSGIPILPPPPQ----ASGPPRSRSSSQAEATLGP 380
+ T+ +SV PA T P++ +P P S P S + A TL
Sbjct: 1194 EPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEE 1253
Query: 381 SSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACG 440
++S A EEL + P P P +A S E + P P AA
Sbjct: 1254 PTSSAAAVLTPEELSSPAASVPTPEEPASPAAAVSN----LEEPASPAAAVPTPEVAAIP 1309
Query: 441 ASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPA 499
A+ P P P+ + A +PP V P VP + S ++ P +E A
Sbjct: 1310 AASVP--TPEVPAIPA--AAVPP--MEEVSPIGVPFLGVSAHTDSVPISEEGTPVLEEA 1362
Score = 32.0 bits (71), Expect = 2.1
Identities = 53/251 (21%), Positives = 90/251 (35%), Gaps = 23/251 (9%)
Query: 353 IPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESA 412
IP+L P + + P + + A TS A E + P P+ ++
Sbjct: 828 IPVLQRPSRTAAVPTVKDALDAALPSPEEGTSIAAVPAPEGTAVVAALVPFPHEDILVAS 887
Query: 413 GNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPPPFP-APVVP 471
++ E+ D+ +A + P + S P +++ A + P AP V
Sbjct: 888 ------IVSLEEEDVT----AAAVSAPERATVPAVTVSVPEGTAAVAAVSSPEETAPAVA 937
Query: 472 ASVPAPS----AGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAK 527
A++ AG S +A + E P G + +H + D A
Sbjct: 938 AAITQEGMSAVAGFSPEWAALAITVPITEEDGTP--EGPVTPATTVHAPEEPDT----AA 991
Query: 528 VTSGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVP 587
V + SP TP P P + P +P S + PP+ P A++ P
Sbjct: 992 VRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPE--EPTSPAAAVPPPEEPTSPAAAVPTP 1049
Query: 588 LESIKPSSALP 598
E P++A+P
Sbjct: 1050 EEPTSPAAAVP 1060
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 50.8 bits (120), Expect = 4e-06
Identities = 81/320 (25%), Positives = 115/320 (35%), Gaps = 70/320 (21%)
Query: 334 TTNSLSSVLAPAPTPP----SSGIP-ILPPPPQASGPPRSRSSSQAEATLGPSSTSNALS 388
TT +LS P+ PP SG P +LP P S PP + ++ P++ + A
Sbjct: 356 TTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPP 415
Query: 389 WLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQ 448
L E A AP+ PK+S L + + SP A +S P+ +
Sbjct: 416 TLQAETATKPQATSAPSPAPKQS------FLFGTQNT-----SPSSPAAPAASSAPPMFK 464
Query: 449 P--SAPSSSSSQAPLPP----------------------PFPAPVV-----PASVPAPSA 479
P +AP S + P PP P PV PASVP P
Sbjct: 465 PIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVPLP-- 522
Query: 480 GSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEA----------KVT 529
+ F PA AP P GLA SA+ + + + A V+
Sbjct: 523 -APFFKQTTTPATAPTT--TAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVS 579
Query: 530 SGLVKPTTSPLIPTTTPARPLLPFSTGPGSPLFQPL--SFQSQGSPPKGPELSLA----- 582
S V TTS T ++P L + + F P S G PP P +
Sbjct: 580 SSSVSTTTS---TATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPALPTTTTVTTFSQ 636
Query: 583 SIHVPLESIKPSSALPVTAY 602
S+H + + SSA + +
Sbjct: 637 SLHTAVPTATSSSAADFSGF 656
Score = 42.0 bits (97), Expect = 0.002
Identities = 62/265 (23%), Positives = 92/265 (34%), Gaps = 53/265 (20%)
Query: 339 SSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLG 398
+S+LAP+ P + + PP P S ++ EA L P T + L LG
Sbjct: 322 TSLLAPSTNPLLESLKKMQTPPSLPPCPESAGAATTEA-LSPPKTPSLLP-------PLG 373
Query: 399 LADPA-PNVPPKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSS 457
L+ P + P S F +P T G AP + P+ + +
Sbjct: 374 LSQSGPPGLLPSPS------------------FDSKPPTTLLGLIPAPSMVPATDTKAPP 415
Query: 458 QAPLPPPFPAPVVPASVPAPSAGSSLFSTGVAPALAPKVEPAVPGHHGLALGNSALHHLD 517
A PAP + +P+ PA P A
Sbjct: 416 TLQAETATKPQATSAPSPAPKQSFLFGTQNTSPS-----SPAAP----------AASSAP 460
Query: 518 ALDQLLEEAKVTSGLVKPT-TSPLIPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKG 576
+ + + A S PT P + T P+ LP +T +P FQP+ F S G P
Sbjct: 461 PMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPV-FSSMGPP--- 516
Query: 577 PELSLASIHVPLESIKPSSALPVTA 601
AS+ +P K ++ P TA
Sbjct: 517 -----ASVPLPAPFFKQTTT-PATA 535
Score = 33.9 bits (76), Expect = 0.54
Identities = 54/222 (24%), Positives = 76/222 (34%), Gaps = 29/222 (13%)
Query: 347 TPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNV 406
TP I PP + SQ+ T P++TS++ + L + PA +
Sbjct: 610 TPAMGSIFQFGKPPALPTTTTVTTFSQSLHTAVPTATSSSAADFSGFGSTLATSAPATSS 669
Query: 407 PPKESAGNSQWHLLQ-----REQSDLDFFSPRPGTAACGASDA-------PLLQPSAPSS 454
P + N+ +S L + A GA++ P L PS SS
Sbjct: 670 QPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALAPSFGSS 729
Query: 455 ---SSSQAPLPPPFPAP-----VVPASVPAP---------SAGSSLFSTGVAPALAPKVE 497
+S AP P PAP VVPA VP P + L +T A +
Sbjct: 730 FTFGNSAAPAAAPTPAPPSMIKVVPAYVPTPIHPIFGGATHSAFGLKATASAFGAPASSQ 789
Query: 498 PAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSP 539
PA G + G + A Q +S T SP
Sbjct: 790 PAFGGSTAVFFGAATSSGFGATTQTASSGSSSSVFGSTTPSP 831
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,799,594
Number of Sequences: 37866
Number of extensions: 1985937
Number of successful extensions: 22300
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 1092
Number of HSP's that attempted gapping in prelim test: 13418
Number of HSP's gapped (non-prelim): 6758
length of query: 723
length of database: 18,247,518
effective HSP length: 110
effective length of query: 613
effective length of database: 14,082,258
effective search space: 8632424154
effective search space used: 8632424154
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.