Guide to the Human Genome
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Name: TOM1L2 Sequence: fasta or formatted (507aa) NCBI GI: 131888135
Description:

target of myb1-like 2 isoform 3

Referenced in:

Lysosomes and Related Organelles

Other entries for this name:
alt prot [457aa] target of myb1-like 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         39           2
 C cysteine            1.2          6           1
 D aspartate           6.3         32           2
 E glutamate           8.7         44           2
 F phenylalanine       2.6         13           1
 G glycine             5.5         28           2
 H histidine           1.0          5           1
 I isoleucine          3.7         19           2
 K lysine              3.6         18           2
 L leucine             9.9         50           2
 M methionine          2.8         14           1
 N asparagine          5.1         26           2
 P proline             7.5         38           3
 Q glutamine           4.5         23           2
 R arginine            6.1         31           1
 S serine              9.3         47           2
 T threonine           5.1         26           1
 V valine              7.5         38           2
 W tryptophan          0.6          3           1
 Y tyrosine            1.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   target of myb1-like 2 isoform 3 
TOM1L2                0.866   target of myb1-like 2 isoform 1 
TOM1                  0.586   target of myb1 isoform 1 
TOM1                  0.580   target of myb1 isoform 2 
TOM1                  0.520   target of myb1 isoform 3 
TOM1                  0.487   target of myb1 isoform 4 
TOM1L1                0.233   target of myb1-like 1 
GGA3                  0.100   ADP-ribosylation factor binding protein 3 isoform lo...
GGA1                  0.088   golgi associated, gamma adaptin ear containing, ARF b...
GGA2                  0.079   ADP-ribosylation factor binding protein 2 
STAM                  0.078   signal transducing adaptor molecule 1 
STAM2                 0.074   signal transducing adaptor molecule 2 
GGA1                  0.071   golgi associated, gamma adaptin ear containing, ARF ...
HGS                   0.064   hepatocyte growth factor-regulated tyrosine kinase su...
GGA3                  0.056   ADP-ribosylation factor binding protein 3 isoform sh...
FAM71E2               0.012   hypothetical protein LOC284418 
SIN3A                 0.012   transcriptional co-repressor Sin3A 
SIN3A                 0.012   transcriptional co-repressor Sin3A 
SIN3A                 0.012   transcriptional co-repressor Sin3A 
MAPK7                 0.012   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.012   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.012   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.012   mitogen-activated protein kinase 7 isoform 2 
COL18A1               0.011   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.011   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
BCL9L                 0.011   B-cell CLL/lymphoma 9-like 
ZSCAN18               0.010   zinc finger and SCAN domain containing 18 isoform 3...
ZSCAN18               0.010   zinc finger and SCAN domain containing 18 isoform 3...
ZSCAN18               0.010   zinc finger and SCAN domain containing 18 isoform 1...
KIF16B                0.010   kinesin-like motor protein C20orf23 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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