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Search of human proteins with 19923236
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
(879 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 1791 0.0
gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens] 1424 0.0
gi|217330601 SP140 nuclear body protein isoform 1 [Homo sapiens] 345 1e-94
gi|4504425 high-mobility group box 1 [Homo sapiens] 321 2e-87
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] 308 1e-83
gi|134133279 SP140 nuclear body protein-like [Homo sapiens] 285 1e-76
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 268 2e-71
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 266 6e-71
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 266 6e-71
gi|194688135 high-mobility group box 2 [Homo sapiens] 265 1e-70
gi|194688133 high-mobility group box 2 [Homo sapiens] 265 1e-70
gi|11321591 high-mobility group box 2 [Homo sapiens] 265 1e-70
gi|71143137 high-mobility group box 3 [Homo sapiens] 231 2e-60
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho... 217 3e-56
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho... 217 3e-56
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho... 217 4e-56
gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens] 206 6e-53
gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens] 200 4e-51
gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens] 200 4e-51
gi|169212060 PREDICTED: high mobility group protein B3-like prot... 199 9e-51
gi|239745831 PREDICTED: high mobility group protein B3-like prot... 199 9e-51
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens] 197 3e-50
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens] 197 3e-50
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap... 197 3e-50
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho... 185 1e-46
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho... 185 1e-46
gi|113416897 PREDICTED: similar to high mobility group box 3 iso... 185 1e-46
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens] 177 3e-44
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens] 177 3e-44
gi|239742753 PREDICTED: similar to high mobility group box 3 iso... 174 4e-43
>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
Length = 879
Score = 1791 bits (4639), Expect = 0.0
Identities = 879/879 (100%), Positives = 879/879 (100%)
Query: 1 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN 60
MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
Sbjct: 1 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN 60
Query: 61 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP 120
KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
Sbjct: 61 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP 120
Query: 121 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS 180
VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
Sbjct: 121 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS 180
Query: 181 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ 240
FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
Sbjct: 181 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ 240
Query: 241 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK 300
KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
Sbjct: 241 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK 300
Query: 301 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL 360
PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
Sbjct: 301 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL 360
Query: 361 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS 420
ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
Sbjct: 361 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS 420
Query: 421 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP 480
GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP
Sbjct: 421 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP 480
Query: 481 QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR 540
QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR
Sbjct: 481 QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR 540
Query: 541 SKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINF 600
SKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINF
Sbjct: 541 SKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINF 600
Query: 601 KQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIR 660
KQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIR
Sbjct: 601 KQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIR 660
Query: 661 CGGYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPCEEHKKKNPDASVKFSEFLKKCS 720
CGGYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPCEEHKKKNPDASVKFSEFLKKCS
Sbjct: 661 CGGYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPCEEHKKKNPDASVKFSEFLKKCS 720
Query: 721 ETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGEKKKKFKDPNAPKRPPLAFFLFC 780
ETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGEKKKKFKDPNAPKRPPLAFFLFC
Sbjct: 721 ETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGEKKKKFKDPNAPKRPPLAFFLFC 780
Query: 781 SEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLKEKYKKDIAAYRAKG 840
SEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLKEKYKKDIAAYRAKG
Sbjct: 781 SEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLKEKYKKDIAAYRAKG 840
Query: 841 KPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDDK 879
KPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDDK
Sbjct: 841 KPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDDK 879
>gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens]
Length = 885
Score = 1424 bits (3685), Expect = 0.0
Identities = 699/701 (99%), Positives = 700/701 (99%)
Query: 1 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN 60
MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN
Sbjct: 1 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN 60
Query: 61 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP 120
KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP
Sbjct: 61 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP 120
Query: 121 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS 180
VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS
Sbjct: 121 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS 180
Query: 181 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ 240
FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ
Sbjct: 181 FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ 240
Query: 241 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK 300
KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK
Sbjct: 241 KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK 300
Query: 301 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL 360
PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL
Sbjct: 301 PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL 360
Query: 361 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS 420
ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS
Sbjct: 361 ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS 420
Query: 421 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP 480
GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP
Sbjct: 421 GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP 480
Query: 481 QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR 540
QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR
Sbjct: 481 QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR 540
Query: 541 SKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINF 600
SKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINF
Sbjct: 541 SKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINF 600
Query: 601 KQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIR 660
KQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIR
Sbjct: 601 KQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIR 660
Query: 661 CGGYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPCEEH 701
CGGYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPC E+
Sbjct: 661 CGGYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPCPEN 701
>gi|217330601 SP140 nuclear body protein isoform 1 [Homo sapiens]
Length = 867
Score = 345 bits (885), Expect = 1e-94
Identities = 255/724 (35%), Positives = 354/724 (48%), Gaps = 131/724 (18%)
Query: 40 EDQGVDDRLLYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNL 99
E Q + +++ + +F+ F+ NKVEI++AI + FPFL GLRDR I+ +M+E Q++ RNL
Sbjct: 29 EGQNLQEQVCPEPIFRFFRENKVEIASAITRPFPFLMGLRDRSFISEQMYEHFQEAFRNL 88
Query: 100 VPVQRVVYNVLSELEKTFNLPVLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEE 159
VPV RV+Y VLSELEKTF LEALFS +N+ YPDL IY+ F+NV ++ PLQ +
Sbjct: 89 VPVTRVMYCVLSELEKTFGWSHLEALFSRINLMAYPDLNEIYRSFQNVCYEHSPLQMNNV 148
Query: 160 EEREERSGLQLSLEQGTGENSFRSLTWPPSGSPSHAGTTPP--ENGLSEHPCETEQINAK 217
+ E+R L L G ENS P A ++ P E G S CE +
Sbjct: 149 NDLEDRPRL---LPYGKQENSNACHEMDDIAVPQEALSSSPRCEPGFSSESCEQLALPKA 205
Query: 218 RKDTTSDKDDSLGSQQTNEQCAQKAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEA 277
D L SC+ +A+Q++ G++ EMP LP D E
Sbjct: 206 GGGDAEDAPSLLPGGGV------------SCK-LAIQIDEGES-EEMPKLLPYDTEV--- 248
Query: 278 ELHNHGIQINSCSVRLVDIKKEKPFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDV 337
L ++G+ I + +S + E Q + ++ ++D E +
Sbjct: 249 -LESNGM-----------IDAARTYSTAPGEKQGEEEGRNSPRK-----RNQDKEKYQES 291
Query: 338 DEPLEVFISAPRSEPVINNDNPLESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKK 397
E R + + P +N E E ++ C P E D
Sbjct: 292 PEG--------RDKETFDLKTPQVTN-EGEPEKGLCLLPGEGEEGSD------------- 329
Query: 398 RVIGQDHDFSESSEEEAPAEASS-----GALRSKHGEKAPMTSRSTSTWRIPSRKRRF-- 450
D SE + E P EASS G++ E + + + P ++
Sbjct: 330 -------DCSEMCDGEEPQEASSSLARCGSVSCLSAETFDLKTPQVTNEGEPEKELSLLP 382
Query: 451 -----SSSDFSDLSNGEELQETCSSSLRRGS----------------------------- 476
S D S++ +GEE QE SS RRGS
Sbjct: 383 GEGEEGSDDCSEMCDGEERQEASSSLARRGSVSSELENHPMNEEGESEELASSLLYDNVP 442
Query: 477 GSQPQEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKK 536
G++ EN+KCSCVMCF + VP S EARTES QA MDT+D+ NNSTL K KRRKK
Sbjct: 443 GAEQSAYENEKCSCVMCFSEEVPGSPEARTESDQACGTMDTVDIANNSTLGKPKRKRRKK 502
Query: 537 RRH---RSKVNGLQRGRKKDRPR---------KHLTLNNK-VQKKRWQQRGR------KA 577
R H R ++ + ++ D + K +N K + K R ++RG+ ++
Sbjct: 503 RGHGWSRMRMRRQENSQQNDNSKADGQVVSSEKKANVNLKDLSKIRGRKRGKPGTRFTQS 562
Query: 578 NTRPLKRRRKRGPRIPKDENINFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKW 637
+ KR R R R KDE ++FK LPVTCG VKG L+K++ +QG KCIQ+ED KW
Sbjct: 563 DRAAQKRVRSRASRKHKDETVDFKAPLLPVTCGGVKGILHKKKLQQGILVKCIQTEDGKW 622
Query: 638 FTPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENKFLPEPPSTR---KKRILESHNNTL 694
FTP EFEI+G SKNW+LS+RCGG+ L+ LMEN FLP+PP R KKRIL+S NN+
Sbjct: 623 FTPTEFEIKGGHARSKNWRLSVRCGGWPLRWLMENGFLPDPPRIRYRKKKRILKSQNNSS 682
Query: 695 VDPC 698
VDPC
Sbjct: 683 VDPC 686
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 321 bits (823), Expect = 2e-87
Identities = 156/180 (86%), Positives = 165/180 (91%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKK+PDASV FSEF KKCSE WKT+ AKEKGKFEDMAKADKA YEREMKTYIPPKGE
Sbjct: 25 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKKFKDPNAPKRPP AFFLFCSEYRPKIKGEHPGLSI DV KKL MWNNTAA DKQ Y
Sbjct: 85 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 144
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878
EKKAAKLKEKY+KDIAAYRAKGKP++AKK VVKAEKSKKKKEEEEDEEDE++EE EED++
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 204
Score = 37.0 bits (84), Expect = 0.080
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822
DP P+ ++ F R + K +HP S++ + KK + W +A +K +E A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 64
Query: 823 AKLKEKYKKDIAAY-------RAKGKPNSAKKR 848
K +Y++++ Y + K K +A KR
Sbjct: 65 KADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97
>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 308 bits (789), Expect = 1e-83
Identities = 149/181 (82%), Positives = 161/181 (88%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKK+ DASV FSEF KCSE WKT+ AKEKGKFEDMAKADK HYER+MKTYIPPKGE
Sbjct: 25 EEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMAKADKTHYERQMKTYIPPKGE 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKKFKDPNAPKRPP AFFLFCSEY PKIKGEHPGLSI DV KKL MWNNTAA DKQ
Sbjct: 85 TKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPG 144
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878
EKKAAKLKEKY+KDIAAY+AKGKP +AKK VVKAEKSKKKKEEEEDEEDE++EE E+++D
Sbjct: 145 EKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEDEED 204
Query: 879 K 879
+
Sbjct: 205 E 205
Score = 30.0 bits (66), Expect = 9.8
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822
DP P+ ++ F R + K +H S++ + K + W +A +K +E A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMA 64
Query: 823 AKLKEKYKKDIAAY-------RAKGKPNSAKKR 848
K Y++ + Y + K K +A KR
Sbjct: 65 KADKTHYERQMKTYIPPKGETKKKFKDPNAPKR 97
>gi|134133279 SP140 nuclear body protein-like [Homo sapiens]
Length = 580
Score = 285 bits (729), Expect = 1e-76
Identities = 141/175 (80%), Positives = 156/175 (89%)
Query: 1 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN 60
MAGGG DLSTR LN +S VANEMNHLPAHS LQR+FTEDQ VD+ L+YD VFKHFKR+
Sbjct: 1 MAGGGSDLSTRGLNGGVSQVANEMNHLPAHSQSLQRLFTEDQDVDEGLVYDTVFKHFKRH 60
Query: 61 KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP 120
K+EISNAIKKTFPFLEGLRDR+LITNKMFEDS+DSCRNLVPVQRVVYNVLSELEKTFNL
Sbjct: 61 KLEISNAIKKTFPFLEGLRDRELITNKMFEDSEDSCRNLVPVQRVVYNVLSELEKTFNLS 120
Query: 121 VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQG 175
VLEALFS+VNMQEYPDLIHIYK F+N I DKL QES+ +EREER ++LSL+QG
Sbjct: 121 VLEALFSEVNMQEYPDLIHIYKSFKNAIQDKLSFQESDRKEREERPDIKLSLKQG 175
Score = 187 bits (474), Expect = 5e-47
Identities = 108/223 (48%), Positives = 135/223 (60%), Gaps = 22/223 (9%)
Query: 498 VPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRH-------RSKVNGLQRGR 550
VP S EAR ES QA MDT+D+ NNSTL K KRRKK+ H R++ N Q
Sbjct: 177 VPESPEARKESDQACGKMDTVDIANNSTLGKPKRKRRKKKGHGWSRMGTRTQKNNQQNDN 236
Query: 551 KKD-----RPRKHLTLNNK-VQKKRWQQRGR------KANTRPLKRRRKRGPRIPKDENI 598
K K +N K + K R ++RG+ +++ P KR R R R KDE +
Sbjct: 237 SKADGQLVSSEKKANMNLKDLSKIRGRKRGKPGTHFTQSDRAPQKRVRSRASRKHKDETV 296
Query: 599 NFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLS 658
+F+ LPVTCG VKG L+KE+ +QGT KCIQ+ED KWFTP EFEI+G SKNW+LS
Sbjct: 297 DFQAPLLPVTCGGVKGILHKEKLEQGTLAKCIQTEDGKWFTPMEFEIKGGYARSKNWRLS 356
Query: 659 IRCGGYTLKVLMENKFLPEPPS---TRKKRILESHNNTLVDPC 698
+RCGG+ L+ LME LP PP KKRIL+S NN+ VDPC
Sbjct: 357 VRCGGWPLRRLMEEGSLPNPPRIYYRNKKRILKSQNNSSVDPC 399
>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 486
Score = 268 bits (685), Expect = 2e-71
Identities = 134/178 (75%), Positives = 148/178 (83%), Gaps = 7/178 (3%)
Query: 709 SVKFSEFLKKCSETWKTIFAKEKGKF-------EDMAKADKAHYEREMKTYIPPKGEKKK 761
SV FSEF KKCSE WK + AKEKGKF EDMAKADKAHY+REMKTYIPPKGE KK
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
Query: 762 KFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 821
KFKDPNAPKRPP AFFL+ SEY PKIKGE PGLS DV KKL MWNNTAA DKQ YEK+
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
Query: 822 AAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDDK 879
+AKLKEKY+KDIAAYRAKGK ++A VVKA KSKKKKEEEE+EEDE++EE E+D+D+
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEDE 341
>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 488
Score = 266 bits (680), Expect = 6e-71
Identities = 133/177 (75%), Positives = 147/177 (83%), Gaps = 7/177 (3%)
Query: 709 SVKFSEFLKKCSETWKTIFAKEKGKF-------EDMAKADKAHYEREMKTYIPPKGEKKK 761
SV FSEF KKCSE WK + AKEKGKF EDMAKADKAHY+REMKTYIPPKGE KK
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
Query: 762 KFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 821
KFKDPNAPKRPP AFFL+ SEY PKIKGE PGLS DV KKL MWNNTAA DKQ YEK+
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
Query: 822 AAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878
+AKLKEKY+KDIAAYRAKGK ++A VVKA KSKKKKEEEE+EEDE++EE E+D++
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEE 340
>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 487
Score = 266 bits (680), Expect = 6e-71
Identities = 136/181 (75%), Positives = 149/181 (82%), Gaps = 10/181 (5%)
Query: 709 SVKFSEFLKKCSETWKTIFAKEKGKF-------EDMAKADKAHYEREMKTYIPPKGEKKK 761
SV FSEF KKCSE WK + AKEKGKF EDMAKADKAHY+REMKTYIPPKGE KK
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223
Query: 762 KFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 821
KFKDPNAPKRPP AFFL+ SEY PKIKGE PGLS DV KKL MWNNTAA DKQ YEK+
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283
Query: 822 AAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEE---DEEDEQEEENEEDDD 878
+AKLKEKY+KDIAAYRAKGK ++A VVKA KSKKKKEEEE DEEDE+EE++EED+D
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343
Query: 879 K 879
+
Sbjct: 344 E 344
>gi|194688135 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 265 bits (677), Expect = 1e-70
Identities = 129/184 (70%), Positives = 149/184 (80%), Gaps = 3/184 (1%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKK+PD+SV F+EF KKCSE WKT+ AKEK KFEDMAK+DKA Y+REMK Y+PPKG+
Sbjct: 25 EEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGD 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KK K KDPNAPKRPP AFFLFCSE+RPKIK EHPGLSI D KKL MW+ +A DKQ Y
Sbjct: 85 KKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPY 144
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKE---EEEDEEDEQEEENEE 875
E+KAAKLKEKY+KDIAAYRAKGK + KK + SKKK E EEE+EE+E E+E EE
Sbjct: 145 EQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEE 204
Query: 876 DDDK 879
D+D+
Sbjct: 205 DEDE 208
Score = 40.0 bits (92), Expect = 0.009
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822
DPN P+ ++ F R + K +HP S++ + KK + W +A +K +E A
Sbjct: 5 DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64
Query: 823 AKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEK 854
K +Y +++ Y KK+ A K
Sbjct: 65 KSDKARYDREMKNYVPPKGDKKGKKKDPNAPK 96
>gi|194688133 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 265 bits (677), Expect = 1e-70
Identities = 129/184 (70%), Positives = 149/184 (80%), Gaps = 3/184 (1%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKK+PD+SV F+EF KKCSE WKT+ AKEK KFEDMAK+DKA Y+REMK Y+PPKG+
Sbjct: 25 EEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGD 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KK K KDPNAPKRPP AFFLFCSE+RPKIK EHPGLSI D KKL MW+ +A DKQ Y
Sbjct: 85 KKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPY 144
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKE---EEEDEEDEQEEENEE 875
E+KAAKLKEKY+KDIAAYRAKGK + KK + SKKK E EEE+EE+E E+E EE
Sbjct: 145 EQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEE 204
Query: 876 DDDK 879
D+D+
Sbjct: 205 DEDE 208
Score = 40.0 bits (92), Expect = 0.009
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822
DPN P+ ++ F R + K +HP S++ + KK + W +A +K +E A
Sbjct: 5 DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64
Query: 823 AKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEK 854
K +Y +++ Y KK+ A K
Sbjct: 65 KSDKARYDREMKNYVPPKGDKKGKKKDPNAPK 96
>gi|11321591 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 265 bits (677), Expect = 1e-70
Identities = 129/184 (70%), Positives = 149/184 (80%), Gaps = 3/184 (1%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKK+PD+SV F+EF KKCSE WKT+ AKEK KFEDMAK+DKA Y+REMK Y+PPKG+
Sbjct: 25 EEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGD 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KK K KDPNAPKRPP AFFLFCSE+RPKIK EHPGLSI D KKL MW+ +A DKQ Y
Sbjct: 85 KKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPY 144
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKE---EEEDEEDEQEEENEE 875
E+KAAKLKEKY+KDIAAYRAKGK + KK + SKKK E EEE+EE+E E+E EE
Sbjct: 145 EQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEE 204
Query: 876 DDDK 879
D+D+
Sbjct: 205 DEDE 208
Score = 40.0 bits (92), Expect = 0.009
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822
DPN P+ ++ F R + K +HP S++ + KK + W +A +K +E A
Sbjct: 5 DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64
Query: 823 AKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEK 854
K +Y +++ Y KK+ A K
Sbjct: 65 KSDKARYDREMKNYVPPKGDKKGKKKDPNAPK 96
>gi|71143137 high-mobility group box 3 [Homo sapiens]
Length = 200
Score = 231 bits (590), Expect = 2e-60
Identities = 114/181 (62%), Positives = 140/181 (77%), Gaps = 5/181 (2%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKKNP+ V F+EF KKCSE WKT+ KEK KF++MAKADK Y+REMK Y P KG
Sbjct: 25 EEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGG 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKKK DPNAPKRPP FFLFCSE+RPKIK +PG+SI DV KKL MWNN ++KQ Y
Sbjct: 85 KKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 142
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878
KAAKLKEKY+KD+A Y++KGK + AK A+ ++KK EEE++EE+E+EEE EE++D
Sbjct: 143 ITKAAKLKEKYEKDVADYKSKGKFDGAKG---PAKVARKKVEEEDEEEEEEEEEEEEEED 199
Query: 879 K 879
+
Sbjct: 200 E 200
Score = 33.9 bits (76), Expect = 0.68
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822
DP PK A+ F R + K ++P + ++ + KK + W + +K +++ A
Sbjct: 5 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
Query: 823 AKLKEKYKKDIAAY------RAKGKPNSAKK 847
K +Y +++ Y + K PN+ K+
Sbjct: 65 KADKVRYDREMKDYGPAKGGKKKKDPNAPKR 95
>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 217 bits (553), Expect = 3e-56
Identities = 108/182 (59%), Positives = 135/182 (74%), Gaps = 4/182 (2%)
Query: 698 CEEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKG 757
C+EHKKKNP+ V F+EF KKCS WKT+ +KEK KF +MAKAD+ Y+REMK Y P KG
Sbjct: 24 CKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKG 83
Query: 758 EKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQF 817
KKK DPNAPKRPP FFLFCSE+RPKIK +PG+SI DV KKL MWNN ++KQ
Sbjct: 84 GKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 140
Query: 818 YEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDD 877
Y KAAKLKEKY+KD+ + KGK AK R K + K ++E+EEDEE+E++E++EED+
Sbjct: 141 YVTKAAKLKEKYEKDVVDCKLKGKFYGAK-RPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199
Query: 878 DK 879
+
Sbjct: 200 QR 201
>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 217 bits (553), Expect = 3e-56
Identities = 108/182 (59%), Positives = 135/182 (74%), Gaps = 4/182 (2%)
Query: 698 CEEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKG 757
C+EHKKKNP+ V F+EF KKCS WKT+ +KEK KF +MAKAD+ Y+REMK Y P KG
Sbjct: 24 CKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKG 83
Query: 758 EKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQF 817
KKK DPNAPKRPP FFLFCSE+RPKIK +PG+SI DV KKL MWNN ++KQ
Sbjct: 84 GKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 140
Query: 818 YEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDD 877
Y KAAKLKEKY+KD+ + KGK AK R K + K ++E+EEDEE+E++E++EED+
Sbjct: 141 YVTKAAKLKEKYEKDVVDCKLKGKFYGAK-RPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199
Query: 878 DK 879
+
Sbjct: 200 QR 201
>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 217 bits (552), Expect = 4e-56
Identities = 108/182 (59%), Positives = 135/182 (74%), Gaps = 4/182 (2%)
Query: 698 CEEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKG 757
C+EHKKKNP+ V F+EF KKCS WKT+ +KEK KF +MAKAD+ Y+REMK Y P KG
Sbjct: 24 CKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKG 83
Query: 758 EKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQF 817
KKK DPNAPKRPP FFLFCSE+RPKIK +PG+SI DV KKL MWNN ++KQ
Sbjct: 84 GKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 140
Query: 818 YEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDD 877
Y KAAKLKEKY+KD+ + KGK AK R K + K ++E+EEDEE+E++E++EED+
Sbjct: 141 YVTKAAKLKEKYEKDVVDCKLKGKFYGAK-RPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199
Query: 878 DK 879
+
Sbjct: 200 QR 201
>gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens]
Length = 549
Score = 206 bits (525), Expect = 6e-53
Identities = 178/652 (27%), Positives = 283/652 (43%), Gaps = 118/652 (18%)
Query: 47 RLLYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVV 106
R + + +F+HF K+ I+ AI K FPF EGL D +IT +M+ +S ++CRNL+PV RVV
Sbjct: 6 RAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIPVSRVV 65
Query: 107 YNVLSELEKTFNLPVLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERS 166
+N+L++LE+TFNL +L LFS +N++EYP+L+ IY+ F+ V ER+ R
Sbjct: 66 HNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRV---------GASYERQSRD 116
Query: 167 GLQLSLEQGTGENSFRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKD 226
+ LE TG SL P + P PP+ S PC +
Sbjct: 117 -TPILLEAPTGLAEGSSLHTPLALPPPQ----PPQPSCS--PCAPRV-----------SE 158
Query: 227 DSLGSQQTNEQCAQKAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQI 286
SQQ++E ++ P++ + + G
Sbjct: 159 PGTSSQQSDEILSESPSPSDPVLPLPALIQEG---------------------------- 190
Query: 287 NSCSVRLVDIKKEKPFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFIS 346
S SV + + E + + ASD ++ D E +P E+ S
Sbjct: 191 RSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKE------DPQEMPHS 244
Query: 347 APRSEPVINNDNPLESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDF 406
S P I +++P E ND +E QE + + P +K +KR I +
Sbjct: 245 PLGSMPEIRDNSP-EPNDPEEPQEVSST-----PSDKKGKK--------RKRCI-----W 285
Query: 407 SESSEEEAPAEASSGALRSKHG--------EKAPMTSRSTSTWRIPSRKRRFSSSDFSDL 458
S G S+HG ++ P ++ + + + ++ +
Sbjct: 286 STPKRRHKKKSLPGGTASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARK 345
Query: 459 SNGEELQETCSSSLRRGSGSQPQEPENKKCSCVMCFP-KGVPRSQEARTESSQASDMMDT 517
S EE+ + +S + G SQ ++ + P G+ + + +Q D
Sbjct: 346 SRSEEIIDG-TSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKD---- 400
Query: 518 MDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKA 577
D NS + K R K +S R ++K + + + + + +K +RG+
Sbjct: 401 -DSTWNSEVMMRVQKARTKCARKS------RSKEKKKEKDICSSSKRRFQKNIHRRGK-- 451
Query: 578 NTRPLKRRRKRGPRIPKDENINFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKW 637
PK + ++F S+LPVTCGE KG LYK++ K G+S KCI++ED W
Sbjct: 452 ---------------PKSDTVDFHCSKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTW 496
Query: 638 FTPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENKFLPEPPSTRKKRILES 689
TP EFE+EG +KNWK +IRC G TL L+++ L PP KR L S
Sbjct: 497 LTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRINLKRELNS 548
>gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens]
Length = 689
Score = 200 bits (509), Expect = 4e-51
Identities = 172/636 (27%), Positives = 276/636 (43%), Gaps = 118/636 (18%)
Query: 47 RLLYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVV 106
R + + +F+HF K+ I+ AI K FPF EGL D +IT +M+ +S ++CRNL+PV RVV
Sbjct: 6 RAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIPVSRVV 65
Query: 107 YNVLSELEKTFNLPVLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERS 166
+N+L++LE+TFNL +L LFS +N++EYP+L+ IY+ F+ V ER+ R
Sbjct: 66 HNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRV---------GASYERQSRD 116
Query: 167 GLQLSLEQGTGENSFRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKD 226
+ LE TG SL P + P PP+ S PC +
Sbjct: 117 -TPILLEAPTGLAEGSSLHTPLALPPPQ----PPQPSCS--PCAPRV-----------SE 158
Query: 227 DSLGSQQTNEQCAQKAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQI 286
SQQ++E ++ P++ + + G
Sbjct: 159 PGTSSQQSDEILSESPSPSDPVLPLPALIQEG---------------------------- 190
Query: 287 NSCSVRLVDIKKEKPFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFIS 346
S SV + + E + + ASD ++ D E +P E+ S
Sbjct: 191 RSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKE------DPQEMPHS 244
Query: 347 APRSEPVINNDNPLESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDF 406
S P I +++P E ND +E QE + + P +K +KR I +
Sbjct: 245 PLGSMPEIRDNSP-EPNDPEEPQEVSST-----PSDKKGKK--------RKRCI-----W 285
Query: 407 SESSEEEAPAEASSGALRSKHG--------EKAPMTSRSTSTWRIPSRKRRFSSSDFSDL 458
S G S+HG ++ P ++ + + + ++ +
Sbjct: 286 STPKRRHKKKSLPGGTASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARK 345
Query: 459 SNGEELQETCSSSLRRGSGSQPQEPENKKCSCVMCFP-KGVPRSQEARTESSQASDMMDT 517
S EE+ + +S + G SQ ++ + P G+ + + +Q D
Sbjct: 346 SRSEEIIDG-TSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKD---- 400
Query: 518 MDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKA 577
D NS + K R K +S R ++K + + + + + +K +RG+
Sbjct: 401 -DSTWNSEVMMRVQKARTKCARKS------RSKEKKKEKDICSSSKRRFQKNIHRRGK-- 451
Query: 578 NTRPLKRRRKRGPRIPKDENINFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKW 637
PK + ++F S+LPVTCGE KG LYK++ K G+S KCI++ED W
Sbjct: 452 ---------------PKSDTVDFHCSKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTW 496
Query: 638 FTPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENK 673
TP EFE+EG +KNWK +IRC G TL L++ K
Sbjct: 497 LTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKRK 532
>gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens]
Length = 713
Score = 200 bits (509), Expect = 4e-51
Identities = 172/636 (27%), Positives = 276/636 (43%), Gaps = 118/636 (18%)
Query: 47 RLLYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVV 106
R + + +F+HF K+ I+ AI K FPF EGL D +IT +M+ +S ++CRNL+PV RVV
Sbjct: 6 RAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIPVSRVV 65
Query: 107 YNVLSELEKTFNLPVLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERS 166
+N+L++LE+TFNL +L LFS +N++EYP+L+ IY+ F+ V ER+ R
Sbjct: 66 HNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRV---------GASYERQSRD 116
Query: 167 GLQLSLEQGTGENSFRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKD 226
+ LE TG SL P + P PP+ S PC +
Sbjct: 117 -TPILLEAPTGLAEGSSLHTPLALPPPQ----PPQPSCS--PCAPRV-----------SE 158
Query: 227 DSLGSQQTNEQCAQKAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQI 286
SQQ++E ++ P++ + + G
Sbjct: 159 PGTSSQQSDEILSESPSPSDPVLPLPALIQEG---------------------------- 190
Query: 287 NSCSVRLVDIKKEKPFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFIS 346
S SV + + E + + ASD ++ D E +P E+ S
Sbjct: 191 RSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKE------DPQEMPHS 244
Query: 347 APRSEPVINNDNPLESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDF 406
S P I +++P E ND +E QE + + P +K +KR I +
Sbjct: 245 PLGSMPEIRDNSP-EPNDPEEPQEVSST-----PSDKKGKK--------RKRCI-----W 285
Query: 407 SESSEEEAPAEASSGALRSKHG--------EKAPMTSRSTSTWRIPSRKRRFSSSDFSDL 458
S G S+HG ++ P ++ + + + ++ +
Sbjct: 286 STPKRRHKKKSLPGGTASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARK 345
Query: 459 SNGEELQETCSSSLRRGSGSQPQEPENKKCSCVMCFP-KGVPRSQEARTESSQASDMMDT 517
S EE+ + +S + G SQ ++ + P G+ + + +Q D
Sbjct: 346 SRSEEIIDG-TSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKD---- 400
Query: 518 MDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKA 577
D NS + K R K +S R ++K + + + + + +K +RG+
Sbjct: 401 -DSTWNSEVMMRVQKARTKCARKS------RSKEKKKEKDICSSSKRRFQKNIHRRGK-- 451
Query: 578 NTRPLKRRRKRGPRIPKDENINFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKW 637
PK + ++F S+LPVTCGE KG LYK++ K G+S KCI++ED W
Sbjct: 452 ---------------PKSDTVDFHCSKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTW 496
Query: 638 FTPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENK 673
TP EFE+EG +KNWK +IRC G TL L++ K
Sbjct: 497 LTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKRK 532
>gi|169212060 PREDICTED: high mobility group protein B3-like
protein-like [Homo sapiens]
Length = 207
Score = 199 bits (506), Expect = 9e-51
Identities = 99/170 (58%), Positives = 121/170 (71%), Gaps = 7/170 (4%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKKNP + F+EF KKCSE WKT+ KEK KF ++AKADK HY++E+K Y P KG
Sbjct: 25 EEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGG 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKK DPNAPKRPP FFLFCSE+ PK K +PG+ I DV KKL MW N ++KQ Y
Sbjct: 85 KKK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPY 141
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDE 868
+AAKLKEKY+KD+A Y++KGK + AK K +KK EEEDE++E
Sbjct: 142 ITQAAKLKEKYEKDVAVYKSKGKSDGAKGPA----KVAQKKVEEEDEDEE 187
Score = 32.0 bits (71), Expect = 2.6
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822
DP PK A+ F R + K ++P + I+ + KK + W + +K + + A
Sbjct: 5 DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
Query: 823 AKLKEKYKKDIAAY-RAKG----KPNSAKK 847
K Y ++I Y AKG PN+ K+
Sbjct: 65 KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94
>gi|239745831 PREDICTED: high mobility group protein B3-like
protein-like [Homo sapiens]
Length = 207
Score = 199 bits (506), Expect = 9e-51
Identities = 99/170 (58%), Positives = 121/170 (71%), Gaps = 7/170 (4%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKKNP + F+EF KKCSE WKT+ KEK KF ++AKADK HY++E+K Y P KG
Sbjct: 25 EEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGG 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKK DPNAPKRPP FFLFCSE+ PK K +PG+ I DV KKL MW N ++KQ Y
Sbjct: 85 KKK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPY 141
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDE 868
+AAKLKEKY+KD+A Y++KGK + AK K +KK EEEDE++E
Sbjct: 142 ITQAAKLKEKYEKDVAVYKSKGKSDGAKGPA----KVAQKKVEEEDEDEE 187
Score = 32.0 bits (71), Expect = 2.6
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822
DP PK A+ F R + K ++P + I+ + KK + W + +K + + A
Sbjct: 5 DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
Query: 823 AKLKEKYKKDIAAY-RAKG----KPNSAKK 847
K Y ++I Y AKG PN+ K+
Sbjct: 65 KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94
>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
Length = 201
Score = 197 bits (502), Expect = 3e-50
Identities = 101/180 (56%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKKNP+ V F EF KKCSE KT+ KEK KF++MAK DK HY++EMK P +G
Sbjct: 25 EEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMAKVDKVHYDQEMKDNGPVEGG 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKK DPNA KRP FFLFCSE+ PKIK +PG+SI D+ KKL MW N + +KQ Y
Sbjct: 85 KKK---DPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPY 141
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878
KAA LKEKY+KD+A Y++KGK +SAK A K K+K++E++EE+E+EEE +E+ +
Sbjct: 142 ITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKKEEGE 201
>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
Length = 201
Score = 197 bits (502), Expect = 3e-50
Identities = 101/180 (56%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKKNP+ V F EF KKCSE KT+ KEK KF++MAK DK HY++EMK P +G
Sbjct: 25 EEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMAKVDKVHYDQEMKDNGPVEGG 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKK DPNA KRP FFLFCSE+ PKIK +PG+SI D+ KKL MW N + +KQ Y
Sbjct: 85 KKK---DPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPY 141
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878
KAA LKEKY+KD+A Y++KGK +SAK A K K+K++E++EE+E+EEE +E+ +
Sbjct: 142 ITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKKEEGE 201
>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
sapiens]
Length = 201
Score = 197 bits (502), Expect = 3e-50
Identities = 101/180 (56%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EEHKKKNP+ V F EF KKCSE KT+ KEK KF++MAK DK HY++EMK P +G
Sbjct: 25 EEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMAKVDKVHYDQEMKDNGPVEGG 84
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKK DPNA KRP FFLFCSE+ PKIK +PG+SI D+ KKL MW N + +KQ Y
Sbjct: 85 KKK---DPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPY 141
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878
KAA LKEKY+KD+A Y++KGK +SAK A K K+K++E++EE+E+EEE +E+ +
Sbjct: 142 ITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVKEKDKEDEEEEEEEEEKKEEGE 201
>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 204
Score = 185 bits (470), Expect = 1e-46
Identities = 101/177 (57%), Positives = 124/177 (70%), Gaps = 9/177 (5%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EE KKKNP V F+EF KKCSE WKT+ KEK KF++MAK DK H +REMK P KG
Sbjct: 25 EECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGG 79
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKKK DP+APKRPP FFLF SE RPKIK +PG+SI DV KKL MWNN ++KQ Y
Sbjct: 80 KKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 137
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEE 875
K AKLKEKY+KD+A ++KGK + +K+ A KK +EE+EDEE+ + N++
Sbjct: 138 ITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA--WKKVEEEDEDEEEMRRRMNKQ 192
>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 204
Score = 185 bits (470), Expect = 1e-46
Identities = 101/177 (57%), Positives = 124/177 (70%), Gaps = 9/177 (5%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EE KKKNP V F+EF KKCSE WKT+ KEK KF++MAK DK H +REMK P KG
Sbjct: 25 EECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGG 79
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKKK DP+APKRPP FFLF SE RPKIK +PG+SI DV KKL MWNN ++KQ Y
Sbjct: 80 KKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 137
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEE 875
K AKLKEKY+KD+A ++KGK + +K+ A KK +EE+EDEE+ + N++
Sbjct: 138 ITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA--WKKVEEEDEDEEEMRRRMNKQ 192
>gi|113416897 PREDICTED: similar to high mobility group box 3
isoform 1 [Homo sapiens]
Length = 201
Score = 185 bits (470), Expect = 1e-46
Identities = 101/177 (57%), Positives = 124/177 (70%), Gaps = 9/177 (5%)
Query: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758
EE KKKNP V F+EF KKCSE WKT+ KEK KF++MAK DK H +REMK P KG
Sbjct: 25 EECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGG 79
Query: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818
KKKK DP+APKRPP FFLF SE RPKIK +PG+SI DV KKL MWNN ++KQ Y
Sbjct: 80 KKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 137
Query: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEE 875
K AKLKEKY+KD+A ++KGK + +K+ A KK +EE+EDEE+ + N++
Sbjct: 138 ITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA--WKKVEEEDEDEEEMRRRMNKQ 192
>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
Length = 214
Score = 177 bits (450), Expect = 3e-44
Identities = 89/125 (71%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 739 KADKAHYEREMKTYIPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDD 798
K D AHYEREMK YIPPK E K KF+DPNAPK PPLAFF+F SE PKIK EHPGLSI D
Sbjct: 34 KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
Query: 799 VVKKLAGMWNNTAAADKQFYEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKK 858
V KKL MWN A DK YEKKA KLKEKY+KDIAA+ KGKP++AKK +KAEK KKK
Sbjct: 93 VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
Query: 859 KEEEE 863
KEE++
Sbjct: 153 KEEDK 157
>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
Length = 214
Score = 177 bits (450), Expect = 3e-44
Identities = 89/125 (71%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Query: 739 KADKAHYEREMKTYIPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDD 798
K D AHYEREMK YIPPK E K KF+DPNAPK PPLAFF+F SE PKIK EHPGLSI D
Sbjct: 34 KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92
Query: 799 VVKKLAGMWNNTAAADKQFYEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKK 858
V KKL MWN A DK YEKKA KLKEKY+KDIAA+ KGKP++AKK +KAEK KKK
Sbjct: 93 VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152
Query: 859 KEEEE 863
KEE++
Sbjct: 153 KEEDK 157
>gi|239742753 PREDICTED: similar to high mobility group box 3
isoform 2 [Homo sapiens]
Length = 183
Score = 174 bits (440), Expect = 4e-43
Identities = 93/165 (56%), Positives = 115/165 (69%), Gaps = 6/165 (3%)
Query: 711 KFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGEKKKKFKDPNAPK 770
K EF KKCSE WKT+ KEK KF++MAK DK H +REMK P KG KKKK DP+APK
Sbjct: 16 KSPEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPK 71
Query: 771 RPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLKEKYK 830
RPP FFLF SE RPKIK +PG+SI DV KKL MWNN ++KQ Y K AKLKEKY+
Sbjct: 72 RPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYE 131
Query: 831 KDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEE 875
KD+A ++KGK + +K+ A KK +EE+EDEE+ + N++
Sbjct: 132 KDVADSKSKGKFDGSKRPAKVA--WKKVEEEDEDEEEMRRRMNKQ 174
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,150,219
Number of Sequences: 37866
Number of extensions: 1980513
Number of successful extensions: 28825
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 335
Number of HSP's that attempted gapping in prelim test: 15707
Number of HSP's gapped (non-prelim): 8663
length of query: 879
length of database: 18,247,518
effective HSP length: 111
effective length of query: 768
effective length of database: 14,044,392
effective search space: 10786093056
effective search space used: 10786093056
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.