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Search of human proteins with 198442851
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|198442851 transcription factor 7 (T-cell specific, HMG-box)
6 [Homo sapiens]
(250 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6... 524 e-149
gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5... 511 e-145
gi|42714657 transcription factor 7 (T-cell specific, HMG-box) is... 511 e-145
gi|42518074 transcription factor 7 (T-cell specific, HMG-box) is... 510 e-145
gi|42518078 transcription factor 7 (T-cell specific, HMG-box) is... 509 e-145
gi|42518080 transcription factor 7 (T-cell specific, HMG-box) is... 509 e-145
gi|47419938 transcription factor 7 (T-cell specific, HMG-box) is... 509 e-145
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ... 244 5e-65
gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ... 244 5e-65
gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens] 234 4e-62
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens] 233 2e-61
gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens] 233 2e-61
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens] 232 2e-61
gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa... 231 3e-61
gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens] 230 1e-60
gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens] 230 1e-60
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens] 209 2e-54
gi|112421108 capicua homolog [Homo sapiens] 71 1e-12
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom... 64 9e-11
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom... 64 9e-11
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo... 64 9e-11
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo... 64 9e-11
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo... 60 2e-09
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom... 60 2e-09
gi|8924248 SRY-box 18 [Homo sapiens] 60 2e-09
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo... 58 7e-09
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo... 58 7e-09
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo... 58 7e-09
gi|41406089 SRY-box 13 [Homo sapiens] 57 2e-08
gi|28195386 sex-determining region Y-box 2 [Homo sapiens] 56 3e-08
>gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6
[Homo sapiens]
Length = 250
Score = 524 bits (1350), Expect = e-149
Identities = 250/250 (100%), Positives = 250/250 (100%)
Query: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
Query: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
Query: 241 STTDNSLHYS 250
STTDNSLHYS
Sbjct: 241 STTDNSLHYS 250
>gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5
[Homo sapiens]
Length = 366
Score = 511 bits (1317), Expect = e-145
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
Query: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
Query: 241 STTD 244
STTD
Sbjct: 241 STTD 244
>gi|42714657 transcription factor 7 (T-cell specific, HMG-box)
isoform 4 [Homo sapiens]
Length = 268
Score = 511 bits (1317), Expect = e-145
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
Query: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
Query: 241 STTD 244
STTD
Sbjct: 241 STTD 244
>gi|42518074 transcription factor 7 (T-cell specific, HMG-box)
isoform 3 [Homo sapiens]
Length = 269
Score = 510 bits (1314), Expect = e-145
Identities = 243/246 (98%), Positives = 245/246 (99%)
Query: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
Query: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
Query: 241 STTDNS 246
STT+ +
Sbjct: 241 STTETN 246
>gi|42518078 transcription factor 7 (T-cell specific, HMG-box)
isoform 2 [Homo sapiens]
Length = 269
Score = 509 bits (1311), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
Query: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
Query: 241 STT 243
STT
Sbjct: 241 STT 243
>gi|42518080 transcription factor 7 (T-cell specific, HMG-box)
isoform 1 [Homo sapiens]
Length = 384
Score = 509 bits (1311), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 116 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 175
Query: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 176 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 235
Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 236 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 295
Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 296 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 355
Query: 241 STT 243
STT
Sbjct: 356 STT 358
>gi|47419938 transcription factor 7 (T-cell specific, HMG-box)
isoform 2 [Homo sapiens]
Length = 269
Score = 509 bits (1311), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
Query: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
Query: 241 STT 243
STT
Sbjct: 241 STT 243
>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
sapiens]
Length = 386
Score = 244 bits (623), Expect = 5e-65
Identities = 133/218 (61%), Positives = 154/218 (70%), Gaps = 14/218 (6%)
Query: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205
Query: 90 QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145
Q+ + WF+H + G PG H IPHPAIV P KQE D +L K Q E +
Sbjct: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262
Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE
Sbjct: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322
Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTT 243
LARKERQLHMQLYPGWSARDNYGKKK+R REK QES +
Sbjct: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360
>gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo
sapiens]
Length = 371
Score = 244 bits (623), Expect = 5e-65
Identities = 133/218 (61%), Positives = 154/218 (70%), Gaps = 14/218 (6%)
Query: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205
Query: 90 QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145
Q+ + WF+H + G PG H IPHPAIV P KQE D +L K Q E +
Sbjct: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262
Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE
Sbjct: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322
Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTT 243
LARKERQLHMQLYPGWSARDNYGKKK+R REK QES +
Sbjct: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360
>gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]
Length = 455
Score = 234 bits (598), Expect = 4e-62
Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 37/247 (14%)
Query: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Query: 90 QLPHTVSWFTHPSLMLGSGVPGHP---------------------------AAIPHPAIV 122
Q+PH + W P + +G HP IPHPAIV
Sbjct: 229 QIPHPLGWQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIV 288
Query: 123 PPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLK 179
P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AECTLK
Sbjct: 289 TPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLK 348
Query: 180 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQ 239
ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R+K
Sbjct: 349 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQP 408
Query: 240 ESTTDNS 246
T ++S
Sbjct: 409 GETNEHS 415
>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
Length = 596
Score = 233 bits (593), Expect = 2e-61
Identities = 133/251 (52%), Positives = 157/251 (62%), Gaps = 41/251 (16%)
Query: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Query: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Q+PH + W F HP +L + + + H IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
Query: 236 EKHQESTTDNS 246
+K T ++S
Sbjct: 409 DKQPGETNEHS 419
>gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]
Length = 579
Score = 233 bits (593), Expect = 2e-61
Identities = 134/251 (53%), Positives = 156/251 (62%), Gaps = 41/251 (16%)
Query: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Query: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Q+PH + W F HP +L + + + H IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
Query: 236 EKHQESTTDNS 246
+K T D S
Sbjct: 409 DKQPGETNDLS 419
>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
Length = 602
Score = 232 bits (592), Expect = 2e-61
Identities = 133/249 (53%), Positives = 155/249 (62%), Gaps = 41/249 (16%)
Query: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251
Query: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Q+PH + W F HP +L + + + H IPH
Sbjct: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311
Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371
Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431
Query: 236 EKHQESTTD 244
+K T D
Sbjct: 432 DKQPGETND 440
>gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo
sapiens]
Length = 399
Score = 231 bits (590), Expect = 3e-61
Identities = 132/243 (54%), Positives = 153/243 (62%), Gaps = 36/243 (14%)
Query: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205
Query: 90 QLPHTVSWFTHPSLMLGSG----------------------VPG----HPAAIPHPAIVP 123
Q+ + W P + G +PG H IPHPAIV
Sbjct: 206 QITPPLGWQGQPVYPITGGFRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGIPHPAIVT 265
Query: 124 PSGKQELQPFDRNL---KTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
P KQE D +L K Q E + E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKE
Sbjct: 266 PQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKE 325
Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R REK QE
Sbjct: 326 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQE 385
Query: 241 STT 243
S +
Sbjct: 386 SAS 388
>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
Length = 442
Score = 230 bits (586), Expect = 1e-60
Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)
Query: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Query: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Q+PH + W F HP +L + + + H IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
Query: 236 EKHQEST 242
+K T
Sbjct: 409 DKQPGET 415
>gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]
Length = 489
Score = 230 bits (586), Expect = 1e-60
Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)
Query: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 216 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 275
Query: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Q+PH + W F HP +L + + + H IPH
Sbjct: 276 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 335
Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 336 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 395
Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 396 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 455
Query: 236 EKHQEST 242
+K T
Sbjct: 456 DKQPGET 462
>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
Length = 588
Score = 209 bits (532), Expect = 2e-54
Identities = 128/277 (46%), Positives = 158/277 (57%), Gaps = 53/277 (19%)
Query: 18 PPSGAGQHPQPQPPLHKANQPP--------HGVPQLSLY--EHFN--SPHPTPAPADISQ 65
P S + + P H +N+ P H + L Y +HF+ SP PT +I
Sbjct: 159 PSSATVKDTRSPSPAHLSNKVPVVQHPHHMHPLTPLITYSNDHFSPGSP-PTHLSPEIDP 217
Query: 66 KQ-VHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFT------------------HPSLMLG 106
K + RP +LS +Y L+ G++GQ+PH + W +P+L +
Sbjct: 218 KTGIPRPPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQPMYSLPPGGFRHPYPALAMN 277
Query: 107 SGV--------------PGHP----AAIPHPAIVPPSGKQELQPFDRNLKTQAESKA--- 145
+ + P HP + IPHPAIV P KQE P + +S
Sbjct: 278 ASMSSLVSSRFSPHMVAPAHPGLPTSGIPHPAIVSPIVKQEPAPPSLSPAVSVKSPVTVK 337
Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
++E KKP +KKPLNAFMLYMKEMRAKV+AECTLKESAAINQILGR+WH LSREEQAKYYE
Sbjct: 338 KEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYE 397
Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQEST 242
LARKERQLH QLYP WSARDNYGKKK+R REK T
Sbjct: 398 LARKERQLHSQLYPTWSARDNYGKKKKRKREKQLSQT 434
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 70.9 bits (172), Expect = 1e-12
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 38/242 (15%)
Query: 3 KETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQ--LSLYEHFNSPHPTPAP 60
KE SA + H PP G G +PP + P P L + E P PT
Sbjct: 72 KEPAESA--AVAHERPPGGTGSADPERPPGATCPESPGPGPPHPLGVVESGKGPPPT--- 126
Query: 61 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
++++ P P L S + H ++ + S P
Sbjct: 127 ---TEEEASGPPGEPRLD--------SETESDHDDAFLSIMS--------------PEIQ 161
Query: 121 IVPPSGKQELQ-----PFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
+ P GK+ Q P +R+ ++ + ++ + +K I++P+NAFM++ K RA V
Sbjct: 162 LPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQR 221
Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
+++ +++ILG W+AL +E+ KY++LA + ++ H + +P W N +KK S
Sbjct: 222 HPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWK-WCNKDRKKSSSE 280
Query: 236 EK 237
K
Sbjct: 281 AK 282
>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
sapiens]
Length = 841
Score = 64.3 bits (155), Expect = 9e-11
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
T AE++ ++A+ +P IK+P+NAFM++ K+ R K++ ++ I++ILG RW
Sbjct: 614 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 673
Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
++S +E+ YYE + ++H++ YP NY K R R
Sbjct: 674 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR 709
>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
sapiens]
Length = 801
Score = 64.3 bits (155), Expect = 9e-11
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
T AE++ ++A+ +P IK+P+NAFM++ K+ R K++ ++ I++ILG RW
Sbjct: 574 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 633
Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
++S +E+ YYE + ++H++ YP NY K R R
Sbjct: 634 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR 669
>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
sapiens]
Length = 804
Score = 64.3 bits (155), Expect = 9e-11
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
T AE++ ++A+ +P IK+P+NAFM++ K+ R K++ ++ I++ILG RW
Sbjct: 577 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 636
Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
++S +E+ YYE + ++H++ YP NY K R R
Sbjct: 637 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR 672
>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
sapiens]
Length = 808
Score = 64.3 bits (155), Expect = 9e-11
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
T AE++ ++A+ +P IK+P+NAFM++ K+ R K++ ++ I++ILG RW
Sbjct: 581 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 640
Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
++S +E+ YYE + ++H++ YP NY K R R
Sbjct: 641 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR 676
>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
sapiens]
Length = 501
Score = 59.7 bits (143), Expect = 2e-09
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 109 VPGHPAAIPHPAIVPPSGKQELQ-------PFDRNLKTQAESKAEKEAKKPTIKKPLNAF 161
VP P +++ PS K E + P D + SK + +K+P+NAF
Sbjct: 289 VPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKD----RNGHVKRPMNAF 344
Query: 162 MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 221
M++ + R + +A I+ LG W+ LS E++ YY+ A+K ++ H + +PGW
Sbjct: 345 MVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGW 404
Query: 222 SARDNYGKKKR 232
+ GK+KR
Sbjct: 405 VYQPRPGKRKR 415
>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
sapiens]
Length = 753
Score = 59.7 bits (143), Expect = 2e-09
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 109 VPGHPAAIPHPAIVPPSGKQELQ-------PFDRNLKTQAESKAEKEAKKPTIKKPLNAF 161
VP P +++ PS K E + P D + SK + +K+P+NAF
Sbjct: 289 VPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKD----RNGHVKRPMNAF 344
Query: 162 MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 221
M++ + R + +A I+ LG W+ LS E++ YY+ A+K ++ H + +PGW
Sbjct: 345 MVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGW 404
Query: 222 SARDNYGKKKR 232
+ GK+KR
Sbjct: 405 VYQPRPGKRKR 415
>gi|8924248 SRY-box 18 [Homo sapiens]
Length = 384
Score = 59.7 bits (143), Expect = 2e-09
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 110 PGHPAAIPHPAIVPPS----GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYM 165
P PA+ P P PP G+ L P R E +A E++ I++P+NAFM++
Sbjct: 45 PAAPASPPSPQRSPPRSPEPGRYGLSPAGRG-----ERQAADESR---IRRPMNAFMVWA 96
Query: 166 KEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD 225
K+ R ++ + +A ++++LG+ W L+ E+ + E A + R H++ +P + R
Sbjct: 97 KDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDHPNYKYRP 156
Query: 226 NYGKKKRRSR 235
K+ R++R
Sbjct: 157 RRKKQARKAR 166
>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
sapiens]
Length = 377
Score = 58.2 bits (139), Expect = 7e-09
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
+ES+ +E++ +P IK+P+NAFM++ K+ R K++ ++ I++ILG RW A+
Sbjct: 152 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 211
Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
+ E+ YYE + + H++ YP +
Sbjct: 212 TNLEKQPYYEEQARLSKQHLEKYPDY 237
>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
sapiens]
Length = 750
Score = 58.2 bits (139), Expect = 7e-09
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
+ES+ +E++ +P IK+P+NAFM++ K+ R K++ ++ I++ILG RW A+
Sbjct: 525 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 584
Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
+ E+ YYE + + H++ YP +
Sbjct: 585 TNLEKQPYYEEQARLSKQHLEKYPDY 610
>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
sapiens]
Length = 763
Score = 58.2 bits (139), Expect = 7e-09
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
+ES+ +E++ +P IK+P+NAFM++ K+ R K++ ++ I++ILG RW A+
Sbjct: 538 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 597
Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
+ E+ YYE + + H++ YP +
Sbjct: 598 TNLEKQPYYEEQARLSKQHLEKYPDY 623
>gi|41406089 SRY-box 13 [Homo sapiens]
Length = 622
Score = 56.6 bits (135), Expect = 2e-08
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 154 IKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQL 213
IK+P+NAFM++ K+ R K++ +++I++ILG RW +++ +E+ YYE + +
Sbjct: 424 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ 483
Query: 214 HMQLYPGW 221
H++ YP +
Sbjct: 484 HLEKYPDY 491
>gi|28195386 sex-determining region Y-box 2 [Homo sapiens]
Length = 317
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 124 PSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAA 183
P G Q+ T A + ++ +K+P+NAFM++ + R K+ E ++
Sbjct: 11 PPGPQQTSGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSE 70
Query: 184 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKH 238
I++ LG W LS E+ + + A++ R LHM+ +P + R K ++K+
Sbjct: 71 ISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKY 125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,420,305
Number of Sequences: 37866
Number of extensions: 747198
Number of successful extensions: 4442
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 330
Number of HSP's that attempted gapping in prelim test: 3519
Number of HSP's gapped (non-prelim): 1082
length of query: 250
length of database: 18,247,518
effective HSP length: 100
effective length of query: 150
effective length of database: 14,460,918
effective search space: 2169137700
effective search space used: 2169137700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.