SOX5 25130

Name: SOX5	Sequence: fasta or formatted (377aa)		NCBI GI: 30061558
Description: SRY (sex determining region Y)-box 5 isoform c		Referenced in: SOX Family
Other entries for this name: alt prot [763aa] SRY (sex determining region Y)-box 5 isoform a alt prot [750aa] SRY (sex determining region Y)-box 5 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 31 2 C cysteine 0.5 2 1 D aspartate 5.3 20 2 E glutamate 8.5 32 3 F phenylalanine 1.3 5 1 G glycine 6.6 25 1 H histidine 2.9 11 1 I isoleucine 5.0 19 1 K lysine 7.2 27 2 L leucine 5.8 22 1 M methionine 3.7 14 2 N asparagine 4.8 18 2 P proline 6.9 26 1 Q glutamine 5.6 21 2 R arginine 5.8 22 2 S serine 9.0 34 3 T threonine 3.4 13 2 V valine 5.0 19 2 W tryptophan 0.5 2 1 Y tyrosine 3.7 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.993 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.993 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX6 0.561 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX6 0.548 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.541 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.541 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX13 0.345 SRY-box 13 SOX17 0.119 SRY-box 17 SOX7 0.114 SRY-box 7 SOX9 0.114 transcription factor SOX9 SOX1 0.110 SRY (sex determining region Y)-box 1 SOX11 0.109 SRY-box 11 SOX14 0.109 SRY-box 14 SOX3 0.108 SRY (sex determining region Y)-box 3 SOX18 0.106 SRY-box 18 SOX12 0.106 SRY (sex determining region Y)-box 12 SOX4 0.105 SRY (sex determining region Y)-box 4 SOX21 0.105 SRY-box 21 SOX2 0.104 sex-determining region Y-box 2 SOX10 0.102 SRY (sex determining region Y)-box 10 SOX8 0.101 SRY (sex determining region Y)-box 8 SRY 0.099 sex determining region Y SOX15 0.099 SRY-box 15 SOX30 0.078 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.078 SRY (sex determining region Y)-box 30 isoform a [Hom... CIC 0.064 capicua homolog LEF1 0.052 lymphoid enhancer-binding factor 1 isoform 3 TCF7L2 0.049 transcription factor 7-like 2 isoform 1 TCF7L2 0.049 transcription factor 7-like 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.