Guide to the Human Genome
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Name: IFI27 Sequence: fasta or formatted (122aa) NCBI GI: 194272171
Description:

interferon, alpha-inducible protein 27 isoform 1

Referenced in:

Interferon

Other entries for this name:
alt prot [119aa] interferon, alpha-inducible protein 27 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            23.0         28           3
 C cysteine            0.0          0           0
 D aspartate           0.0          0           0
 E glutamate           0.8          1           1
 F phenylalanine       2.5          3           1
 G glycine            11.5         14           3
 H histidine           0.0          0           0
 I isoleucine          7.4          9           1
 K lysine              2.5          3           1
 L leucine             8.2         10           1
 M methionine          4.9          6           2
 N asparagine          0.8          1           1
 P proline             1.6          2           1
 Q glutamine           0.8          1           1
 R arginine            2.5          3           1
 S serine             13.9         17           3
 T threonine           5.7          7           1
 V valine             13.1         16           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon, alpha-inducible protein 27 isoform 1 [H... 
IFI27                 0.943   interferon, alpha-inducible protein 27 isoform 2 [Ho...
IFI27L2               0.461   TLH29 protein precursor 
IFI27L1               0.394   interferon, alpha-inducible protein 27-like 1 
IFI27L1               0.394   interferon, alpha-inducible protein 27-like 1 
IFI6                  0.254   interferon, alpha-inducible protein 6 isoform c [Hom...
IFI6                  0.254   interferon, alpha-inducible protein 6 isoform b [Hom...
IFI6                  0.254   interferon, alpha-inducible protein 6 isoform a [Hom...
LOC100290496          0.052   PREDICTED: hypothetical protein XP_002348126 
LOC100292594          0.052   PREDICTED: hypothetical protein 
LOC100290955          0.052   PREDICTED: hypothetical protein XP_002346424 
LOC100288670          0.052   PREDICTED: hypothetical protein XP_002342097 
NOVA1                 0.047   neuro-oncological ventral antigen 1 isoform 1 
NOVA1                 0.047   neuro-oncological ventral antigen 1 isoform 2 
RNF112                0.041   ring finger protein 112 
HCFC1                 0.036   host cell factor 1 
FAM181B               0.036   hypothetical protein LOC220382 
AMOT                  0.036   angiomotin isoform 2 
AMOT                  0.036   angiomotin isoform 1 
GATA4                 0.026   GATA binding protein 4 
YEATS2                0.026   YEATS domain containing 2 
SP8                   0.021   Sp8 transcription factor isoform 1 
SP8                   0.021   Sp8 transcription factor isoform 2 
C6orf192              0.021   hypothetical protein LOC116843 
CCND3                 0.016   cyclin D3 isoform 4 
CCND3                 0.016   cyclin D3 isoform 1 
CCND3                 0.016   cyclin D3 isoform 3 
CCND3                 0.016   cyclin D3 isoform 2 
ELN                   0.016   elastin isoform e precursor 
ELN                   0.016   elastin isoform d precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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