Guide to the Human Genome
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Name: CCND3 Sequence: fasta or formatted (211aa) NCBI GI: 209862835
Description:

cyclin D3 isoform 1

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [220aa] cyclin D3 isoform 3
alt prot [96aa] cyclin D3 isoform 4
alt prot [292aa] cyclin D3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         25           2
 C cysteine            3.3          7           1
 D aspartate           4.7         10           1
 E glutamate           4.7         10           1
 F phenylalanine       1.9          4           1
 G glycine             5.2         11           1
 H histidine           2.4          5           1
 I isoleucine          4.3          9           1
 K lysine              3.8          8           2
 L leucine            14.2         30           2
 M methionine          2.4          5           1
 N asparagine          0.5          1           1
 P proline             5.2         11           2
 Q glutamine           5.2         11           1
 R arginine            5.7         12           1
 S serine              8.5         18           3
 T threonine           8.1         17           2
 V valine              4.7         10           1
 W tryptophan          0.9          2           1
 Y tyrosine            2.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin D3 isoform 1 
CCND3                 1.000   cyclin D3 isoform 2 
CCND3                 0.716   cyclin D3 isoform 3 
CCND2                 0.566   cyclin D2 
CCND1                 0.447   cyclin D1 
CCND3                 0.416   cyclin D3 isoform 4 
CCNA1                 0.122   cyclin A1 isoform c 
CCNA1                 0.122   cyclin A1 isoform c 
CCNA1                 0.122   cyclin A1 isoform b 
CCNA1                 0.122   cyclin A1 isoform a 
CCNA2                 0.112   cyclin A 
CCNB2                 0.091   cyclin B2 
CCNO                  0.081   cyclin domain containing 
CCNB1                 0.079   cyclin B1 
CCNJ                  0.074   cyclin J isoform 1 
CCNE2                 0.058   cyclin E2 
CCNG1                 0.048   cyclin G1 
CCNG1                 0.048   cyclin G1 
CCNB3                 0.038   cyclin B3 isoform 1 
CCNB3                 0.038   cyclin B3 isoform 3 
CCNJ                  0.036   cyclin J isoform 2 
CCNJL                 0.036   cyclin J-like 
CCNJ                  0.033   cyclin J isoform 3 
CCNG2                 0.030   cyclin G2 
IMP5                  0.030   intramembrane protease 5 
CNTD2                 0.030   cyclin N-terminal domain containing 2 isoform 2 [Ho...
CCNI                  0.025   cyclin I 
CCNI2                 0.023   cyclin I family, member 2 
TCERG1                0.018   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.018   transcription elongation regulator 1 isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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