Guide to the Human Genome
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Name: CCND3 Sequence: fasta or formatted (220aa) NCBI GI: 209915553
Description:

cyclin D3 isoform 3

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [211aa] cyclin D3 isoform 1
alt prot [96aa] cyclin D3 isoform 4
alt prot [292aa] cyclin D3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         25           2
 C cysteine            3.2          7           2
 D aspartate           4.5         10           1
 E glutamate           6.4         14           2
 F phenylalanine       2.3          5           1
 G glycine             5.9         13           1
 H histidine           2.7          6           1
 I isoleucine          3.6          8           1
 K lysine              3.2          7           2
 L leucine            13.2         29           2
 M methionine          3.2          7           1
 N asparagine          0.0          0           0
 P proline             5.9         13           2
 Q glutamine           5.5         12           1
 R arginine            7.3         16           1
 S serine              7.7         17           3
 T threonine           5.9         13           1
 V valine              4.5         10           1
 W tryptophan          1.4          3           1
 Y tyrosine            2.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin D3 isoform 3 
CCND3                 0.773   cyclin D3 isoform 2 
CCND3                 0.675   cyclin D3 isoform 1 
CCND3                 0.392   cyclin D3 isoform 4 
CCND2                 0.337   cyclin D2 
CCND1                 0.237   cyclin D1 
CCNJ                  0.041   cyclin J isoform 1 
CCNJL                 0.036   cyclin J-like 
IMP5                  0.029   intramembrane protease 5 
CCNE2                 0.024   cyclin E2 
TCERG1                0.017   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.017   transcription elongation regulator 1 isoform 1 [Homo...
TIAM2                 0.014   T-cell lymphoma invasion and metastasis 2 isoform a ...
DNAH7                 0.012   dynein, axonemal, heavy chain 7 
POLH                  0.012   DNA-directed DNA polymerase eta 
CCNO                  0.012   cyclin domain containing 
TMEM184A              0.012   transmembrane protein 184A 
IL17RE                0.012   interleukin 17 receptor E isoform 1 
IL17RE                0.012   interleukin 17 receptor E isoform 2 
IL17RE                0.012   interleukin 17 receptor E isoform 1 
PRKCSH                0.012   protein kinase C substrate 80K-H isoform 2 
PRKCSH                0.012   protein kinase C substrate 80K-H isoform 1 
SCAP                  0.010   SREBF chaperone protein 
ASXL3                 0.010   additional sex combs like 3 
LOC100293526          0.010   PREDICTED: hypothetical protein 
LOC100291411          0.010   PREDICTED: hypothetical protein XP_002348184 
LOC100288664          0.010   PREDICTED: hypothetical protein XP_002343845 
PTPRG                 0.010   protein tyrosine phosphatase, receptor type, G prec...
ADRM1                 0.010   adhesion regulating molecule 1 precursor 
ADRM1                 0.010   adhesion regulating molecule 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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