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Search of human proteins with 194272168
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
(1003 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 2037 0.0
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 2037 0.0
gi|14251207 MOV10-like 1 [Homo sapiens] 423 e-118
gi|54792138 helicase with zinc finger domain [Homo sapiens] 180 7e-45
gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens] 157 5e-38
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 117 4e-26
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 117 4e-26
gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens] 115 2e-25
gi|113722133 senataxin [Homo sapiens] 92 3e-18
gi|122937299 DNA replication helicase 2 homolog [Homo sapiens] 86 2e-16
gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens] 63 1e-09
gi|38788372 aquarius [Homo sapiens] 40 0.008
gi|23943900 transmembrane channel-like 8 [Homo sapiens] 33 1.0
gi|194306571 replication factor C 5 isoform 2 [Homo sapiens] 33 1.8
gi|194306567 replication factor C 5 isoform 2 [Homo sapiens] 33 1.8
gi|6677723 replication factor C 5 isoform 1 [Homo sapiens] 33 1.8
gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens] 33 1.8
gi|52426743 cisplatin resistance-associated overexpressed protei... 33 1.8
gi|19923485 cisplatin resistance-associated overexpressed protei... 33 1.8
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens] 32 3.9
gi|42716289 erythrocyte membrane protein band 4.1 (elliptocytosi... 31 5.1
gi|42716291 erythrocyte membrane protein band 4.1 (elliptocytosi... 31 5.1
gi|4758274 erythrocyte membrane protein band 4.1 (elliptocytosis... 31 5.1
gi|66529203 hypothetical protein LOC57714 [Homo sapiens] 31 5.1
gi|4758118 death-associated protein 3 [Homo sapiens] 31 6.7
gi|16905526 death-associated protein 3 [Homo sapiens] 31 6.7
gi|169234742 NACHT and WD repeat domain containing 1 [Homo sapiens] 31 6.7
gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens] 30 8.7
gi|10947135 ATP-binding cassette, sub-family F, member 1 isoform... 30 8.7
gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform... 30 8.7
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 2037 bits (5277), Expect = 0.0
Identities = 1003/1003 (100%), Positives = 1003/1003 (100%)
Query: 1 MPSKFSCRQLREAGQCFESFLVVRGLDMETDRERLRTIYNRDFKISFGTPAPGFSSMLYG 60
MPSKFSCRQLREAGQCFESFLVVRGLDMETDRERLRTIYNRDFKISFGTPAPGFSSMLYG
Sbjct: 1 MPSKFSCRQLREAGQCFESFLVVRGLDMETDRERLRTIYNRDFKISFGTPAPGFSSMLYG 60
Query: 61 MKIANLAYVTKTRVRFFRLDRWADVRFPEKRRMKLGSDISKHHKSLLAKIFYDRAEYLHG 120
MKIANLAYVTKTRVRFFRLDRWADVRFPEKRRMKLGSDISKHHKSLLAKIFYDRAEYLHG
Sbjct: 61 MKIANLAYVTKTRVRFFRLDRWADVRFPEKRRMKLGSDISKHHKSLLAKIFYDRAEYLHG 120
Query: 121 KHGVDVEVQGPHEARDGQLLIRLDLNRKEVLTLRLRNGGTQSVTLTHLFPLCRTPQFAFY 180
KHGVDVEVQGPHEARDGQLLIRLDLNRKEVLTLRLRNGGTQSVTLTHLFPLCRTPQFAFY
Sbjct: 121 KHGVDVEVQGPHEARDGQLLIRLDLNRKEVLTLRLRNGGTQSVTLTHLFPLCRTPQFAFY 180
Query: 181 NEDQELPCPLGPGECYELHVHCKTSFVGYFPATVLWELLGPGESGSEGAGTFYIARFLAA 240
NEDQELPCPLGPGECYELHVHCKTSFVGYFPATVLWELLGPGESGSEGAGTFYIARFLAA
Sbjct: 181 NEDQELPCPLGPGECYELHVHCKTSFVGYFPATVLWELLGPGESGSEGAGTFYIARFLAA 240
Query: 241 VAHSPLAAQLKPMTPFKRTRITGNPVVTNRIEEGERPDRAKGYDLELSMALGTYYPPPRL 300
VAHSPLAAQLKPMTPFKRTRITGNPVVTNRIEEGERPDRAKGYDLELSMALGTYYPPPRL
Sbjct: 241 VAHSPLAAQLKPMTPFKRTRITGNPVVTNRIEEGERPDRAKGYDLELSMALGTYYPPPRL 300
Query: 301 RQLLPMLLQGTSIFTAPKEIAEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHYDL 360
RQLLPMLLQGTSIFTAPKEIAEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHYDL
Sbjct: 301 RQLLPMLLQGTSIFTAPKEIAEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHYDL 360
Query: 361 ESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHKV 420
ESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHKV
Sbjct: 361 ESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHKV 420
Query: 421 ELDRVKLSFSMSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWLLWPMLFPVAPRD 480
ELDRVKLSFSMSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWLLWPMLFPVAPRD
Sbjct: 421 ELDRVKLSFSMSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWLLWPMLFPVAPRD 480
Query: 481 VPLLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQ 540
VPLLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQ
Sbjct: 481 VPLLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQ 540
Query: 541 VVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDA 600
VVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDA
Sbjct: 541 VVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDA 600
Query: 601 KKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIA 660
KKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIA
Sbjct: 601 KKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIA 660
Query: 661 GLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGY 720
GLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGY
Sbjct: 661 GLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGY 720
Query: 721 DPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHG 780
DPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHG
Sbjct: 721 DPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHG 780
Query: 781 VMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKI 840
VMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKI
Sbjct: 781 VMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKI 840
Query: 841 RYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLK 900
RYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLK
Sbjct: 841 RYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLK 900
Query: 901 NPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAKLDLQQGQN 960
NPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAKLDLQQGQN
Sbjct: 901 NPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAKLDLQQGQN 960
Query: 961 LLQGLSKLSPSTSGPHSHDYLPQEREGEGGLSLQVEPEWRNEL 1003
LLQGLSKLSPSTSGPHSHDYLPQEREGEGGLSLQVEPEWRNEL
Sbjct: 961 LLQGLSKLSPSTSGPHSHDYLPQEREGEGGLSLQVEPEWRNEL 1003
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 2037 bits (5277), Expect = 0.0
Identities = 1003/1003 (100%), Positives = 1003/1003 (100%)
Query: 1 MPSKFSCRQLREAGQCFESFLVVRGLDMETDRERLRTIYNRDFKISFGTPAPGFSSMLYG 60
MPSKFSCRQLREAGQCFESFLVVRGLDMETDRERLRTIYNRDFKISFGTPAPGFSSMLYG
Sbjct: 1 MPSKFSCRQLREAGQCFESFLVVRGLDMETDRERLRTIYNRDFKISFGTPAPGFSSMLYG 60
Query: 61 MKIANLAYVTKTRVRFFRLDRWADVRFPEKRRMKLGSDISKHHKSLLAKIFYDRAEYLHG 120
MKIANLAYVTKTRVRFFRLDRWADVRFPEKRRMKLGSDISKHHKSLLAKIFYDRAEYLHG
Sbjct: 61 MKIANLAYVTKTRVRFFRLDRWADVRFPEKRRMKLGSDISKHHKSLLAKIFYDRAEYLHG 120
Query: 121 KHGVDVEVQGPHEARDGQLLIRLDLNRKEVLTLRLRNGGTQSVTLTHLFPLCRTPQFAFY 180
KHGVDVEVQGPHEARDGQLLIRLDLNRKEVLTLRLRNGGTQSVTLTHLFPLCRTPQFAFY
Sbjct: 121 KHGVDVEVQGPHEARDGQLLIRLDLNRKEVLTLRLRNGGTQSVTLTHLFPLCRTPQFAFY 180
Query: 181 NEDQELPCPLGPGECYELHVHCKTSFVGYFPATVLWELLGPGESGSEGAGTFYIARFLAA 240
NEDQELPCPLGPGECYELHVHCKTSFVGYFPATVLWELLGPGESGSEGAGTFYIARFLAA
Sbjct: 181 NEDQELPCPLGPGECYELHVHCKTSFVGYFPATVLWELLGPGESGSEGAGTFYIARFLAA 240
Query: 241 VAHSPLAAQLKPMTPFKRTRITGNPVVTNRIEEGERPDRAKGYDLELSMALGTYYPPPRL 300
VAHSPLAAQLKPMTPFKRTRITGNPVVTNRIEEGERPDRAKGYDLELSMALGTYYPPPRL
Sbjct: 241 VAHSPLAAQLKPMTPFKRTRITGNPVVTNRIEEGERPDRAKGYDLELSMALGTYYPPPRL 300
Query: 301 RQLLPMLLQGTSIFTAPKEIAEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHYDL 360
RQLLPMLLQGTSIFTAPKEIAEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHYDL
Sbjct: 301 RQLLPMLLQGTSIFTAPKEIAEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHYDL 360
Query: 361 ESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHKV 420
ESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHKV
Sbjct: 361 ESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHKV 420
Query: 421 ELDRVKLSFSMSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWLLWPMLFPVAPRD 480
ELDRVKLSFSMSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWLLWPMLFPVAPRD
Sbjct: 421 ELDRVKLSFSMSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWLLWPMLFPVAPRD 480
Query: 481 VPLLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQ 540
VPLLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQ
Sbjct: 481 VPLLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQ 540
Query: 541 VVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDA 600
VVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDA
Sbjct: 541 VVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDA 600
Query: 601 KKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIA 660
KKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIA
Sbjct: 601 KKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIA 660
Query: 661 GLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGY 720
GLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGY
Sbjct: 661 GLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGY 720
Query: 721 DPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHG 780
DPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHG
Sbjct: 721 DPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHG 780
Query: 781 VMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKI 840
VMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKI
Sbjct: 781 VMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKI 840
Query: 841 RYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLK 900
RYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLK
Sbjct: 841 RYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLK 900
Query: 901 NPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAKLDLQQGQN 960
NPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAKLDLQQGQN
Sbjct: 901 NPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENGGYTGCPFPAKLDLQQGQN 960
Query: 961 LLQGLSKLSPSTSGPHSHDYLPQEREGEGGLSLQVEPEWRNEL 1003
LLQGLSKLSPSTSGPHSHDYLPQEREGEGGLSLQVEPEWRNEL
Sbjct: 961 LLQGLSKLSPSTSGPHSHDYLPQEREGEGGLSLQVEPEWRNEL 1003
>gi|14251207 MOV10-like 1 [Homo sapiens]
Length = 1211
Score = 423 bits (1087), Expect = e-118
Identities = 297/825 (36%), Positives = 425/825 (51%), Gaps = 131/825 (15%)
Query: 232 FYIARFLAAVAHSPLAAQLKPMTPFKRTRITGNPVVTNRIEEGERPDRAKGYDLELSMAL 291
F I R+L S + + PF ++ + +T+ + + +L L
Sbjct: 436 FLIGRYLEVNVISGEESLIAAREPFSWKKLKSSQALTSAKTTVVVTAQKRNSRRQLPSFL 495
Query: 292 GTYYPPPRLRQLLPMLLQGTSIFTAPKEIAEIKAQLETALKWRNYEVKLRLLLHLEELQM 351
Y P RLR+ + Q I T +AE+ L NY+ K LL LEE+
Sbjct: 496 PQYPIPDRLRKCVE---QKIDILTFQPLLAEL-------LNMSNYKEKFSTLLWLEEIYA 545
Query: 352 EHDIRHYDLESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPI 411
E +++ Y++ + + +N LL LEVPG+ E RPS+ GD L +L ++ + I
Sbjct: 546 EMELKEYNMSGIILR-----RNGDLLVLEVPGLAEGRPSLYAGDKL--ILKTQEYNGHAI 598
Query: 412 TYKGFVHKVELDRVKLSFSMSLLSRFVDGLTFK---VNFTFNRQPLRVQHRAL------- 461
Y +V ++ + V L + F F+ V FT+NR R H AL
Sbjct: 599 EYISYVTEIHEEDVTLKIN----PEFEQAYNFEPMDVEFTYNRTTSRRCHFALEHVIHLG 654
Query: 462 --------------ELTGRWLLWPMLFP-------------------------VAPRDVP 482
++TG W V +D+P
Sbjct: 655 VKVLFPEEIILQSPQVTGNWNHAQDTKSSGQSTSKKNRKTMTDQAEHGTEERRVGDKDLP 714
Query: 483 LL----------------PSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPP 526
+L P K++ ++ L N Q A++ I++G RP PYI+FGPP
Sbjct: 715 VLAPFTAEMSDWVDEIQTPKARKMEFFNPVLNEN--QKLAVKRILSGDCRPLPYILFGPP 772
Query: 527 GTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRL---RVHLPSSIYRLLAPSR 583
GTGKTVT++EA+ QV LP + IL CAPSNS ADL+C RL +V P+++ R+ A R
Sbjct: 773 GTGKTVTIIEAVLQVHFALPDSRILVCAPSNSAADLVCLRLHESKVLQPATMVRVNATCR 832
Query: 584 DIRMVPEDIKPCCNWDAKKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIF 643
+V + +KP C + GE ++ A + +R++ITT ++G + HFTH+F
Sbjct: 833 FEEIVIDAVKPYC----RDGEDIWKASR----FRIIITTCSSSGLFYQIGVRVGHFTHVF 884
Query: 644 IDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLL 703
+DEAG EPE L+ + GLM D GQ+VLAGDP QLGPV++S L +GL S L
Sbjct: 885 VDEAGQASEPECLIPL-GLMS-----DISGQIVLAGDPMQLGPVIKSRLAMAYGLNVSFL 938
Query: 704 ERLLTYNSLYKKGPDGY------DPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADV 757
ERL++ Y++ + + +P +TKL++NYRSH +L +P++L+Y EL+ CAD
Sbjct: 939 ERLMS-RPAYQRDENAFGACGAHNPLLVTKLVKNYRSHEALLMLPSRLFYHRELEVCADP 997
Query: 758 VDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKK 817
W LP++GFP+IFHGV G + REG SPS+FNP EA V Y LL S
Sbjct: 998 TVVTSLLGWEKLPKKGFPLIFHGVRGSEAREGKSPSWFNPAEAVQVLRYCCLLAHSIS-- 1055
Query: 818 GKARLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVIL 877
+++S +GVI+PYRKQVEKIR + + D+ D+KVGSVEEFQGQE VI+
Sbjct: 1056 --SQVSASDIGVITPYRKQVEKIRILLRNV--------DLMDIKVGSVEEFQGQEYLVII 1105
Query: 878 ISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEF 937
ISTVRS++ + D F LGFL N KRFNVA+TR KALLI++GNP +L DP + LE+
Sbjct: 1106 ISTVRSNEDRFEDDRYF-LGFLSNSKRFNVAITRPKALLIVLGNPHVLVRDPCFGALLEY 1164
Query: 938 CKENGGYTGCPFPAKLDLQQGQNLLQGLSKLS----PSTSGPHSH 978
NG Y GC P LQ QN +G++ S P ++GP H
Sbjct: 1165 SITNGVYMGCDLPPA--LQSLQNCGEGVADPSYPVVPESTGPEKH 1207
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 180 bits (456), Expect = 7e-45
Identities = 162/570 (28%), Positives = 266/570 (46%), Gaps = 79/570 (13%)
Query: 444 KVNFTFNRQPLRVQHRALE-LTGRWLLWPMLFPVAPRDVPLLPSDVKLKLYDRSLES--N 500
++ F NR PL H AL+ + +L+P + + P +P P+ + +D L+ N
Sbjct: 590 ELQFQLNRLPLCEMHYALDRIKDNGVLFPDI-SMTPT-IPWSPN----RQWDEQLDPRLN 643
Query: 501 PEQLQAMRHIVTGTT-RPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 559
+Q +A+ I T + P +I GP GTGKT TL +A+K +++ + IL C SNS
Sbjct: 644 AKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ-QETRILICTHSNSA 702
Query: 560 ADLLCQR-LRVHLPSSI-----YRLLAPSRDIRMVPEDIKPCCNWDAKKGEYVFPAKKKL 613
ADL + L ++ + R+ +R ++ V + C + + P K+ +
Sbjct: 703 ADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 762
Query: 614 QEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGG 673
++RV++ TL T+ L FTHI +DEA ME E+++ +A + + T
Sbjct: 763 LKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA--LATQNT----- 815
Query: 674 QLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLL--RN 731
++VLAGD QL P + S ++ L SLL+RL + Y +F ++L N
Sbjct: 816 RIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEH----------YPAEFPCRILLCEN 865
Query: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNS 791
YRSH I++ ++L+YEG+L A + F +P+ F G+D +E NS
Sbjct: 866 YRSHEAIINYTSELFYEGKLMASGKQPAHKDF----------YPLTFFTARGEDVQEKNS 915
Query: 792 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDREL 851
+F+N E V ++ L +L S+GV++PY QV +IR EL
Sbjct: 916 TAFYNNAEVFEVVERVE-ELRRKWPVAWGKLDDGSIGVVTPYADQVFRIR-------AEL 967
Query: 852 RGLDDIKDLKVGSVEEFQGQERSVILISTVRS--------------SQSFVQLDLDFNLG 897
R + D+ V V QG++ V+ +STVR+ Q D + G
Sbjct: 968 R-KKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYG 1026
Query: 898 FLKNPKRFNVAVTRAKALLIIVGNPLLLGH----DPDWKVFLEFCKENGGYTGCPFPAKL 953
FL N K N A+TRA++L+ +VG+P+ L W+ F+ C EN G F
Sbjct: 1027 FLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHGITF---- 1082
Query: 954 DLQQGQNLLQGLSKLSPSTSGPHSHDYLPQ 983
+Q + L+ L P + +++P+
Sbjct: 1083 --EQIKAQLEALELKKTYVLNPLAPEFIPR 1110
>gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens]
Length = 1118
Score = 157 bits (397), Expect = 5e-38
Identities = 141/472 (29%), Positives = 212/472 (44%), Gaps = 80/472 (16%)
Query: 500 NPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 559
N Q+ A++ ++ RP +I GPPGTGKTVT + + + +L CAPSN
Sbjct: 472 NHSQVYAVKTVLQ---RPLS-LIQGPPGTGKTVTSATIVYHLARQ-GNGPVLVCAPSNIA 526
Query: 560 ADLLCQRLR----------------VHLPSSIYRLLAPSRDIRMVPE-----DIKPCCNW 598
D L +++ + P S L R++ +PE +K
Sbjct: 527 VDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGE 586
Query: 599 DAKKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPI---DHFTHIFIDEAGHCMEPES 655
+ E + A K+ E +L+ + V A P F I IDE+ EPE
Sbjct: 587 LSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPEC 646
Query: 656 LVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKK 715
+V + ++ K QL+L GD QLGPV+ K GL SL ERL+
Sbjct: 647 MVPV--VLGAK-------QLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL------ 691
Query: 716 GPDGYDPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFP 775
G P +L YR HP + P+ ++YEG LQ DR + P+ P
Sbjct: 692 ---GIRP---IRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKP 745
Query: 776 IIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRK 835
+ F+ G++E + S+ N EAA V LL KA P +G+I+PY
Sbjct: 746 MFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLL-------KAGAKPDQIGIITPYEG 798
Query: 836 Q----VEKIRYC---ITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFV 888
Q V+ +++ TKL +E+ ++ SV+ FQG+E+ I++S VR+++
Sbjct: 799 QRSYLVQYMQFSGSLHTKLYQEV---------EIASVDAFQGREKDFIILSCVRANEHQ- 848
Query: 889 QLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKE 940
+GFL +P+R NVA+TRA+ +IIVGNP L P W L + KE
Sbjct: 849 ------GIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 894
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 117 bits (294), Expect = 4e-26
Identities = 140/524 (26%), Positives = 216/524 (41%), Gaps = 133/524 (25%)
Query: 500 NPEQLQAMRHIVTGTTRPAPY-IIFGPPGTGKTVTLVEAI--------KQVV-------- 542
NP Q A+R + P+ +I GPPGTGKT+ + + +QV
Sbjct: 2154 NPSQNVAVREALE-----KPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGE 2208
Query: 543 KHLPKAHILACAPSNSGADLLCQRL--RVHL-PSSIYRLLAPSRD-----------IRMV 588
K L IL C PSN D+L L R+ L P +Y A + + +R
Sbjct: 2209 KRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKS 2268
Query: 589 PEDIKP-------------------------CCNWDAKKGEY------------VFPAKK 611
P + +P + ++GE ++ A+K
Sbjct: 2269 PREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARK 2328
Query: 612 -KLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGD 670
+L + V++ T A SA I I +DEAG EPE+L+ + + ++
Sbjct: 2329 FELDRHEVILCTCSCAA---SASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEK--- 2382
Query: 671 PGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLR 730
+VL GD +QL PV+++ Q GL SL ER Y + D Q
Sbjct: 2383 ----VVLLGDHKQLRPVVKNERLQNLGLDRSLFER-------YHEDAHMLDTQ------- 2424
Query: 731 NYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDER--- 787
YR H I P+ +Y+ +L+ + AG ++ P+IF V G +
Sbjct: 2425 -YRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAG--KESCPVIFGHVQGHERSLLV 2481
Query: 788 ---EGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCI 844
EGN S N EE A V K L + + P+ + V++PY Q +I +
Sbjct: 2482 STDEGNENSKANLEEVAEVVRITKQLTLGRT------VEPQDIAVLTPYNAQASEISKAL 2535
Query: 845 TKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFN--------- 895
+ + I + V S+ + QG E +L+STVR+ + DLD
Sbjct: 2536 RR--------EGIAGVAVSSITKSQGSEWRYVLVSTVRTC---AKSDLDQRPTKSWLKKF 2584
Query: 896 LGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCK 939
LGF+ +P + NVAVTRA+ L ++G+ LLL P W+ L+FC+
Sbjct: 2585 LGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCE 2628
Score = 114 bits (284), Expect = 6e-25
Identities = 122/449 (27%), Positives = 205/449 (45%), Gaps = 57/449 (12%)
Query: 516 RPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRL------RV 569
R P +I+GP GTGKT TL A +V++ P+ +L C +NS AD+ +
Sbjct: 536 RVPPLLIYGPFGTGKTYTLAMASLEVIRR-PETKVLICTHTNSAADIYIREYFHSHVSGG 594
Query: 570 HLPSSIYRLLAPSRDIRMV-PEDIKPCCNWDAKKGEYVFPAKKKLQEYRVLITTLITAGR 628
H ++ R++ R + P ++ CC D ++ + P + +L +RV++TT A
Sbjct: 595 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQA-FRPPTRAELARHRVVVTTTSQARE 653
Query: 629 LVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVL 688
L + P+ F+HI IDEA +E E+L +A G +LVLAGD Q+ P L
Sbjct: 654 L---RVPVGFFSHILIDEAAQMLECEALTPLA-------YASHGTRLVLAGDHMQVTPRL 703
Query: 689 RSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYE 748
S + + ++LL RL Y++ Q NYR I+ ++ +Y
Sbjct: 704 FS-VARARAAEHTLLHRLFL---CYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYV 759
Query: 749 GE---LQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTS 805
+ + A V R +P++F V G +R+ + S+ N E A V
Sbjct: 760 AKGNPIHARGKVPPHPRH----------YPLMFCHVAGSPDRDMSMASWLNLAEIAQVVE 809
Query: 806 YLKLLLA--PSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVG 863
++ PS G+ + R + V+S + QV +R +ELR D+ + VG
Sbjct: 810 KVQEAYNTWPSCWGGREQ---RCICVVS-HGAQVSALR-------QELR-RRDLGQVSVG 857
Query: 864 SVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNPL 923
S E G++ V+++STV + QS + F + + N +TRA++ L++VG+ +
Sbjct: 858 SFEILPGRQFRVVVLSTVHTCQSLLSPGA-LAPEFFTDARVLNTVLTRAQSQLVVVGDAV 916
Query: 924 LL----GHDPDWKVFLEFCKENGGYTGCP 948
L W+ F+ C E ++ CP
Sbjct: 917 ALCSFGACGKLWESFIRECVER--HSVCP 943
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 117 bits (294), Expect = 4e-26
Identities = 140/524 (26%), Positives = 216/524 (41%), Gaps = 133/524 (25%)
Query: 500 NPEQLQAMRHIVTGTTRPAPY-IIFGPPGTGKTVTLVEAI--------KQVV-------- 542
NP Q A+R + P+ +I GPPGTGKT+ + + +QV
Sbjct: 1585 NPSQNVAVREALE-----KPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGE 1639
Query: 543 KHLPKAHILACAPSNSGADLLCQRL--RVHL-PSSIYRLLAPSRD-----------IRMV 588
K L IL C PSN D+L L R+ L P +Y A + + +R
Sbjct: 1640 KRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKS 1699
Query: 589 PEDIKP-------------------------CCNWDAKKGEY------------VFPAKK 611
P + +P + ++GE ++ A+K
Sbjct: 1700 PREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARK 1759
Query: 612 -KLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGD 670
+L + V++ T A SA I I +DEAG EPE+L+ + + ++
Sbjct: 1760 FELDRHEVILCTCSCAA---SASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEK--- 1813
Query: 671 PGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLR 730
+VL GD +QL PV+++ Q GL SL ER Y + D Q
Sbjct: 1814 ----VVLLGDHKQLRPVVKNERLQNLGLDRSLFER-------YHEDAHMLDTQ------- 1855
Query: 731 NYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDER--- 787
YR H I P+ +Y+ +L+ + AG ++ P+IF V G +
Sbjct: 1856 -YRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAG--KESCPVIFGHVQGHERSLLV 1912
Query: 788 ---EGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCI 844
EGN S N EE A V K L + + P+ + V++PY Q +I +
Sbjct: 1913 STDEGNENSKANLEEVAEVVRITKQLTLGRT------VEPQDIAVLTPYNAQASEISKAL 1966
Query: 845 TKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFN--------- 895
+ + I + V S+ + QG E +L+STVR+ + DLD
Sbjct: 1967 RR--------EGIAGVAVSSITKSQGSEWRYVLVSTVRTC---AKSDLDQRPTKSWLKKF 2015
Query: 896 LGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCK 939
LGF+ +P + NVAVTRA+ L ++G+ LLL P W+ L+FC+
Sbjct: 2016 LGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCE 2059
Score = 86.7 bits (213), Expect = 1e-16
Identities = 106/414 (25%), Positives = 184/414 (44%), Gaps = 56/414 (13%)
Query: 551 LACAPSNSGADLLCQRL------RVHLPSSIYRLLAPSRDIRMV-PEDIKPCCNWDAKKG 603
++ +PS S AD+ + H ++ R++ R + P ++ CC D ++
Sbjct: 1 MSSSPSRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQA 60
Query: 604 EYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLM 663
+ P + +L +RV++TT A L + P+ F+HI IDEA +E E+L +A
Sbjct: 61 -FRPPTRAELARHRVVVTTTSQAREL---RVPVGFFSHILIDEAAQMLECEALTPLA--- 113
Query: 664 EVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQ 723
G +LVLAGD Q+ P L S + + ++LL RL Y++ Q
Sbjct: 114 ----YASHGTRLVLAGDHMQVTPRLFS-VARARAAEHTLLHRLFL---CYQQETHEVARQ 165
Query: 724 FITKLLRNYRSHPTILDIPNQLYYEGE---LQACADVVDRERFCRWAGLPRQGFPIIFHG 780
NYR I+ ++ +Y + + A V R +P++F
Sbjct: 166 SRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRH----------YPLMFCH 215
Query: 781 VMGKDEREGNSPSFFNPEEAATVTSYLKLLLA--PSSKKGKARLSPRSVGVISPYRKQVE 838
V G +R+ + S+ N E A V ++ PS G+ + R + V+S + QV
Sbjct: 216 VAGSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQ---RCICVVS-HGAQVS 271
Query: 839 KIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGF 898
+R +ELR D+ + VGS E G++ V+++STV + QS + F
Sbjct: 272 ALR-------QELR-RRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGA-LAPEF 322
Query: 899 LKNPKRFNVAVTRAKALLIIVGNPLLL----GHDPDWKVFLEFCKENGGYTGCP 948
+ + N +TRA++ L++VG+ + L W+ F+ C E ++ CP
Sbjct: 323 FTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVER--HSVCP 374
>gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 115 bits (289), Expect = 2e-25
Identities = 122/470 (25%), Positives = 191/470 (40%), Gaps = 94/470 (20%)
Query: 521 IIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLA 580
II GPPGTGKT T+VE I Q VK K +L CAPSN D L +RL + I RL
Sbjct: 211 IIHGPPGTGKTTTVVEIILQAVKQGLK--VLCCAPSNIAVDNLVERLAL-CKQRILRLGH 267
Query: 581 PSR----------DIRMVPEDIKPCCNWDAKKGEYVFPAKKKLQEYR------------- 617
P+R D + D K + VF KK Q+ R
Sbjct: 268 PARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLR 327
Query: 618 ---------VLITTLITAGRLVSAQ-----------FPIDHFTHIFIDEAGHCMEPESLV 657
++ +L +A +++ P +F + IDE +E +
Sbjct: 328 KELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWI 387
Query: 658 AIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGP 717
+ + +LAGD +QL P S GL SL+ERL
Sbjct: 388 PLL----------KARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLA---------- 427
Query: 718 DGYDPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDR--ERFCRWAGLPRQGFP 775
+ Y + + L YR H I+ + Y G+L A + V A G P
Sbjct: 428 EEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVP 487
Query: 776 IIFHGVMGK---DEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISP 832
++ G + E + S NP E V+ +++ L+ A + R + V+SP
Sbjct: 488 LLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALV-------DAGVPARDIAVVSP 540
Query: 833 YRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDL 892
Y QV+ +R + EL ++ SV+ FQG+E+ +++S VRS++
Sbjct: 541 YNLQVDLLRQSLVHRHPEL---------EIKSVDGFQGREKEAVILSFVRSNRKG----- 586
Query: 893 DFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENG 942
+GFL +R NVAVTRA+ + ++ + + + K +E+ ++G
Sbjct: 587 --EVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHG 634
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 91.7 bits (226), Expect = 3e-18
Identities = 87/339 (25%), Positives = 152/339 (44%), Gaps = 51/339 (15%)
Query: 615 EYRVLITTLITAGRLV-----SAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETG 669
E ++ TL T+G L+ Q + F+ + +DEAG E E+L +
Sbjct: 2147 ESHIICCTLSTSGGLLLESAFRGQGGVP-FSCVIVDEAGQSCEIETLTPLIHRCN----- 2200
Query: 670 DPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLER---LLTYN---SLYKKGPDGYDPQ 723
+L+L GDP+QL P + S Q++G S++ R LL N ++ + P
Sbjct: 2201 ----KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLP------ 2250
Query: 724 FITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMG 783
I +L YR HP I P+ Y L+ W P F + G
Sbjct: 2251 -ILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWPFQPYLVFDV------G 2303
Query: 784 KDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYC 843
++ S+ N +E V +KL+ K + +S R++G+I+ Y+ Q I+
Sbjct: 2304 DGSERRDNDSYINVQEIKLVMEIIKLI-----KDKRKDVSFRNIGIITHYKAQKTMIQ-- 2356
Query: 844 ITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 903
LD+E D +V +V+ FQG+++ ++++ VR++ + ++GFL + +
Sbjct: 2357 -KDLDKEF---DRKGPAEVDTVDAFQGRQKDCVIVTCVRANS------IQGSIGFLASLQ 2406
Query: 904 RFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENG 942
R NV +TRAK L I+G+ L + W ++ ++ G
Sbjct: 2407 RLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRG 2445
Score = 35.8 bits (81), Expect = 0.21
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 14/61 (22%)
Query: 521 IIFGPPGTGKTVTLVEAI-KQVVKHLPKAH-------------ILACAPSNSGADLLCQR 566
+I GPPGTGK+ T+V + + + ++ K H +L CAPSN+ D L ++
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 567 L 567
+
Sbjct: 2020 I 2020
>gi|122937299 DNA replication helicase 2 homolog [Homo sapiens]
Length = 1146
Score = 85.5 bits (210), Expect = 2e-16
Identities = 111/455 (24%), Positives = 196/455 (43%), Gaps = 66/455 (14%)
Query: 483 LLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVV 542
+LP D K + N Q QAM+ ++ +I G PGTGKT T+ ++ +
Sbjct: 696 VLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYT---LIVGMPGTGKTTTICTLVR--I 750
Query: 543 KHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDAKK 602
+ +L + ++S D + +L RL I+ V I+ + +
Sbjct: 751 LYACGFSVLLTSYTHSAVDNILLKL-AKFKIGFLRL----GQIQKVHPAIQQFTEQEICR 805
Query: 603 GEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGL 662
+ + + Y + T + F F +DEA +P + + L
Sbjct: 806 SKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQP---ICLGPL 862
Query: 663 MEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDP 722
+ + VL GD +QL P++ + + G+ SL +RL S
Sbjct: 863 FFSR-------RFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKSA---------- 905
Query: 723 QFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDRE----RFCRWAGLPRQGFPIIF 778
+ +L YR + I+ + N+L YEG+L+ +D V R + L + +
Sbjct: 906 --VVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYS 963
Query: 779 HGVMGKDEREGNSPSFF-------NPEEA-----ATVTSYLKLLLAPSSKKGKARLSPRS 826
E N+P F PE+ + VT KL++ +S KA SP
Sbjct: 964 DNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTE-AKLIVFLTSIFVKAGCSPSD 1022
Query: 827 VGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQS 886
+G+I+PYR+Q++ I + + I ++V +V+++QG+++S++L+S VRS++
Sbjct: 1023 IGIIAPYRQQLKIINDLLAR---------SIGMVEVNTVDKYQGRDKSIVLVSFVRSNK- 1072
Query: 887 FVQLDLDFNLG-FLKNPKRFNVAVTRAKALLIIVG 920
D +G LK+ +R NVA+TRAK LI++G
Sbjct: 1073 ------DGTVGELLKDWRRLNVAITRAKHKLILLG 1101
>gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]
Length = 1918
Score = 63.2 bits (152), Expect = 1e-09
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 51/301 (16%)
Query: 642 IFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRS-PLTQKHGLGY 700
+ ++EA +E ++ ++ + L+L GD +QL P L + L
Sbjct: 1003 VIVEEAAEVLEAHTIATLSKACQ---------HLILIGDHQQLRPSANVYDLAKNFNLEV 1053
Query: 701 SLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDR 760
SL ERL+ N + +L +R P I + Y+ +L+ V+
Sbjct: 1054 SLFERLVKVNIPF------------VRLNYQHRMCPEIARLLTPHIYQ-DLENHPSVLKY 1100
Query: 761 ERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKA 820
E+ G+ F + H ++ +EG S N EA V K L
Sbjct: 1101 EKI---KGVSSNLF-FVEHNFPEQEIQEGKSHQ--NQHEAHFVVELCKYFLCQE------ 1148
Query: 821 RLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILIST 880
P + +++ Y Q+ +C+ R+L ++V V+++QG+E +IL+S
Sbjct: 1149 -YLPSQITILTTYTGQL----FCL----RKLMPAKTFAGVRVHVVDKYQGEENDIILLSL 1199
Query: 881 VRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKE 940
VRS+Q + +GFL+ R VA++RAK + +GN +L P W + +E
Sbjct: 1200 VRSNQ-------EGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRE 1252
Query: 941 N 941
N
Sbjct: 1253 N 1253
>gi|38788372 aquarius [Homo sapiens]
Length = 1485
Score = 40.4 bits (93), Expect = 0.008
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 44/286 (15%)
Query: 639 FTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGL 698
+ +I ++EA +E E+ + + L ++ + ++ GD QL PV+++ QK
Sbjct: 1056 YDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQK--- 1111
Query: 699 GYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYE-GELQACADV 757
YS +E+ L + + G D L R+ ++ ++ N Y G L +
Sbjct: 1112 -YSNMEQSL-FTRFVRVGVPTVD------LDAQGRARASLCNLYNWRYKNLGNLPHVQLL 1163
Query: 758 VDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTS---YLKLLLAPS 814
E AGL I G E E N + N EA V + Y+ LL P+
Sbjct: 1164 P--EFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPA 1221
Query: 815 SKKGKARLSPRSVGVISPYRKQVEKIRYCITKL--DRELRGLDDIKDLKVGSVEEFQGQE 872
K + +++ Y Q IR I + + L G + KV +V+ FQGQ+
Sbjct: 1222 DK----------ISILTTYNGQKHLIRDIINRRCGNNPLIGRPN----KVTTVDRFQGQQ 1267
Query: 873 RSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLII 918
IL+S VR+ +G L++ +R VA++RA+ L I
Sbjct: 1268 NDYILLSLVRTRA----------VGHLRDVRRLVVAMSRARLGLYI 1303
Score = 36.6 bits (83), Expect = 0.12
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 503 QLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADL 562
Q++A+R +P ++ GPPGTGKT V+ I + + P+ L SN +
Sbjct: 806 QIEAIR----AGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQ 861
Query: 563 LCQRL 567
L +++
Sbjct: 862 LFEKI 866
>gi|23943900 transmembrane channel-like 8 [Homo sapiens]
Length = 726
Score = 33.5 bits (75), Expect = 1.0
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 299 RLRQLLPMLLQGTSIFTAPKEIAEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHY 358
RLR+ L +G ++ + EI T + R+Y LR LL L L + +
Sbjct: 76 RLREAAQRLARGLGLWEGA--LYEIGGLFGTGI--RSYFTFLRFLLLLNLLSL---LLTA 128
Query: 359 DLESVPMTW-DPVDQNPRL-LTLEVPGVTESRPSVLR 393
+P+ W P D P L LTL+ PG +S P VLR
Sbjct: 129 SFVLLPLVWLRPPDPGPTLNLTLQCPGSRQSPPGVLR 165
>gi|194306571 replication factor C 5 isoform 2 [Homo sapiens]
Length = 319
Score = 32.7 bits (73), Expect = 1.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 521 IIFGPPGTGKTVTLVEAIKQVVK 543
+++GPPGTGKT T++ KQ+ K
Sbjct: 36 LLYGPPGTGKTSTILACAKQLYK 58
>gi|194306567 replication factor C 5 isoform 2 [Homo sapiens]
Length = 319
Score = 32.7 bits (73), Expect = 1.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 521 IIFGPPGTGKTVTLVEAIKQVVK 543
+++GPPGTGKT T++ KQ+ K
Sbjct: 36 LLYGPPGTGKTSTILACAKQLYK 58
>gi|6677723 replication factor C 5 isoform 1 [Homo sapiens]
Length = 340
Score = 32.7 bits (73), Expect = 1.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 521 IIFGPPGTGKTVTLVEAIKQVVK 543
+++GPPGTGKT T++ KQ+ K
Sbjct: 57 LLYGPPGTGKTSTILACAKQLYK 79
>gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]
Length = 4646
Score = 32.7 bits (73), Expect = 1.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 504 LQAMRH---IVTGTTRPAPYIIFGPPGTGKTVTLVEAIK 539
L +RH + T P ++ GPPG+GKT+TL A++
Sbjct: 2572 LDTVRHEALLYTWLAEHKPLVLCGPPGSGKTMTLFSALR 2610
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 32.7 bits (73), Expect = 1.8
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 806 YLKLLLAPSSKK---GKARLS----PRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIK 858
YL+ LLA ++ G ARL+ +S G P K EKI+ K+D L+ ++++
Sbjct: 88 YLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELG 147
Query: 859 DLKVGSVEEFQG--------QERSVILISTVRSSQSF 887
G VEE QG +E +L ST + +SF
Sbjct: 148 --SEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESF 182
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 32.7 bits (73), Expect = 1.8
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 806 YLKLLLAPSSKK---GKARLS----PRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIK 858
YL+ LLA ++ G ARL+ +S G P K EKI+ K+D L+ ++++
Sbjct: 88 YLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELG 147
Query: 859 DLKVGSVEEFQG--------QERSVILISTVRSSQSF 887
G VEE QG +E +L ST + +SF
Sbjct: 148 --SEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESF 182
>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
Length = 980
Score = 31.6 bits (70), Expect = 3.9
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 503 QLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGA 560
+LQ ++TGT+ ++ GPPG GKT + A + HL K + +SGA
Sbjct: 452 RLQPGGALLTGTSS---VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGA 506
>gi|42716289 erythrocyte membrane protein band 4.1 (elliptocytosis
1, RH-linked) isoform 1 [Homo sapiens]
Length = 775
Score = 31.2 bits (69), Expect = 5.1
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 795 FNPEEAATVTS-----YLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDR 849
F P + A +T YL L L G+ S ++ ++ Y Q E Y D
Sbjct: 253 FYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDY-----DP 307
Query: 850 ELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKR---FN 906
EL G+D + D K+ + + +E+ + L + R S + Q DL+ FL+N K+ +
Sbjct: 308 ELHGVDYVSDFKLAPNQTKELEEKVMELHKSYR-SMTPAQADLE----FLENAKKLSMYG 362
Query: 907 VAVTRAKAL 915
V + +AK L
Sbjct: 363 VDLHKAKDL 371
>gi|42716291 erythrocyte membrane protein band 4.1 (elliptocytosis
1, RH-linked) isoform 2 [Homo sapiens]
Length = 641
Score = 31.2 bits (69), Expect = 5.1
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 795 FNPEEAATVTS-----YLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDR 849
F P + A +T YL L L G+ S ++ ++ Y Q E Y D
Sbjct: 79 FYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDY-----DP 133
Query: 850 ELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKR---FN 906
EL G+D + D K+ + + +E+ + L + R S + Q DL+ FL+N K+ +
Sbjct: 134 ELHGVDYVSDFKLAPNQTKELEEKVMELHKSYR-SMTPAQADLE----FLENAKKLSMYG 188
Query: 907 VAVTRAKAL 915
V + +AK L
Sbjct: 189 VDLHKAKDL 197
>gi|4758274 erythrocyte membrane protein band 4.1 (elliptocytosis 1,
RH-linked) isoform 3 [Homo sapiens]
Length = 588
Score = 31.2 bits (69), Expect = 5.1
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 795 FNPEEAATVTS-----YLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDR 849
F P + A +T YL L L G+ S ++ ++ Y Q E Y D
Sbjct: 79 FYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDY-----DP 133
Query: 850 ELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKR---FN 906
EL G+D + D K+ + + +E+ + L + R S + Q DL+ FL+N K+ +
Sbjct: 134 ELHGVDYVSDFKLAPNQTKELEEKVMELHKSYR-SMTPAQADLE----FLENAKKLSMYG 188
Query: 907 VAVTRAKAL 915
V + +AK L
Sbjct: 189 VDLHKAKDL 197
>gi|66529203 hypothetical protein LOC57714 [Homo sapiens]
Length = 1063
Score = 31.2 bits (69), Expect = 5.1
Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 19/188 (10%)
Query: 267 VTNRIEEGERPDRAKGYDLELSMALGTYYP------PPRLRQLLPMLLQGTSIFTAPKEI 320
V N I +G R D KG + ++ L + + L Q + P I
Sbjct: 510 VMNHITDGPRKDLVKGKQIAAALMLDSTFSILQTWDTINLNSFFTQFEQFCFVLQQPM-I 568
Query: 321 AEIKAQLETALKWRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPVD--QNPRLLT 378
E +AQL T L++R EVK L HL+ +H + D +S PVD +L T
Sbjct: 569 YEGQAQLWTDLQYREKEVKRYLWQHLK----KHVVPLPDGKSTDFL--PVDCPVRSKLKT 622
Query: 379 -LEVPGVTESRPSVLRG--DHLFALLSSETHQEDPITYKGFVHKVELDRVKLSFSMSLLS 435
L V V E +L G D L LL+S+ D ++ H + + + + ++L
Sbjct: 623 GLIVLFVVEKIELLLEGSLDWLCHLLTSDASSPDEF-HRDLSHILGIPQSWRLYLVNLCQ 681
Query: 436 RFVDGLTF 443
R +D T+
Sbjct: 682 RCMDTRTY 689
>gi|4758118 death-associated protein 3 [Homo sapiens]
Length = 398
Score = 30.8 bits (68), Expect = 6.7
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 6/37 (16%)
Query: 520 YIIFGPPGTGKTVTLVEAI----KQ--VVKHLPKAHI 550
Y+++G GTGKT++L I KQ ++ H+P AH+
Sbjct: 124 YLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHL 160
>gi|16905526 death-associated protein 3 [Homo sapiens]
Length = 398
Score = 30.8 bits (68), Expect = 6.7
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 6/37 (16%)
Query: 520 YIIFGPPGTGKTVTLVEAI----KQ--VVKHLPKAHI 550
Y+++G GTGKT++L I KQ ++ H+P AH+
Sbjct: 124 YLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHL 160
>gi|169234742 NACHT and WD repeat domain containing 1 [Homo sapiens]
Length = 1429
Score = 30.8 bits (68), Expect = 6.7
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 505 QAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHL 545
Q +RH + + P ++FGPPG GKT + + +Q+ + L
Sbjct: 189 QQLRH--DDSKQHTPLVLFGPPGIGKTALMCKLAEQMPRLL 227
>gi|24497435 proteasome 26S ATPase subunit 5 [Homo sapiens]
Length = 406
Score = 30.4 bits (67), Expect = 8.7
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Query: 500 NPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTV 532
+PE +A+ G +P +++GPPGTGKT+
Sbjct: 171 HPELFEAL-----GIAQPKGVLLYGPPGTGKTL 198
>gi|10947135 ATP-binding cassette, sub-family F, member 1 isoform b
[Homo sapiens]
Length = 807
Score = 30.4 bits (67), Expect = 8.7
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 486 SDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHL 545
SD+KL+ + S + A +IV G Y + GP G GKT L + +
Sbjct: 264 SDIKLEKFSISAHGKELFVNADLYIVAGRR----YGLVGPNGKGKTTLLKHIANRALSIP 319
Query: 546 PKAHILAC 553
P +L C
Sbjct: 320 PNIDVLLC 327
>gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform a
[Homo sapiens]
Length = 845
Score = 30.4 bits (67), Expect = 8.7
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 486 SDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHL 545
SD+KL+ + S + A +IV G Y + GP G GKT L + +
Sbjct: 302 SDIKLEKFSISAHGKELFVNADLYIVAGRR----YGLVGPNGKGKTTLLKHIANRALSIP 357
Query: 546 PKAHILAC 553
P +L C
Sbjct: 358 PNIDVLLC 365
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,450,859
Number of Sequences: 37866
Number of extensions: 2025924
Number of successful extensions: 4440
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4354
Number of HSP's gapped (non-prelim): 53
length of query: 1003
length of database: 18,247,518
effective HSP length: 112
effective length of query: 891
effective length of database: 14,006,526
effective search space: 12479814666
effective search space used: 12479814666
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.