BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|192807323 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform A [Homo sapiens] (1679 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 3390 0.0 gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 3311 0.0 gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 3311 0.0 gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 3227 0.0 gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 3224 0.0 gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 3221 0.0 gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 3218 0.0 gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 2379 0.0 gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 2370 0.0 gi|164419749 SWI/SNF-related matrix-associated actin-dependent r... 470 e-132 gi|21071044 SWI/SNF-related matrix-associated actin-dependent re... 461 e-129 gi|21071058 SWI/SNF-related matrix-associated actin-dependent re... 449 e-125 gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 395 e-109 gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 392 e-108 gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 388 e-107 gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 388 e-107 gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 387 e-107 gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 386 e-107 gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa... 384 e-106 gi|21914927 helicase, lymphoid-specific [Homo sapiens] 382 e-105 gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 367 e-101 gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s... 362 2e-99 gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 360 6e-99 gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 354 5e-97 gi|148612870 chromodomain helicase DNA binding protein 1-like [H... 350 9e-96 gi|190358534 SWI/SNF-related, matrix-associated actin-dependent ... 306 1e-82 gi|190358536 SWI/SNF-related, matrix-associated actin-dependent ... 305 3e-82 gi|190358532 SWI/SNF-related, matrix-associated actin-dependent ... 305 3e-82 gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 274 6e-73 gi|38708321 INO80 complex homolog 1 [Homo sapiens] 259 2e-68 >gi|192807323 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform A [Homo sapiens] Length = 1679 Score = 3390 bits (8790), Expect = 0.0 Identities = 1679/1679 (100%), Positives = 1679/1679 (100%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 Query: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 Query: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 Query: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP Sbjct: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 Query: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 Query: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG Sbjct: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 Query: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV Sbjct: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 Query: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL Sbjct: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 Query: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK Sbjct: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 Query: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG Sbjct: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 Query: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES Sbjct: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 Query: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV Sbjct: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 Query: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE Sbjct: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 Query: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA Sbjct: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 Query: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH Sbjct: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 Query: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE Sbjct: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 Query: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD Sbjct: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD Sbjct: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS Sbjct: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 Query: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK Sbjct: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440 Query: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA Sbjct: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 Query: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD Sbjct: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 Query: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES Sbjct: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620 Query: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED Sbjct: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 >gi|192807312 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B [Homo sapiens] Length = 1647 Score = 3311 bits (8584), Expect = 0.0 Identities = 1647/1679 (98%), Positives = 1647/1679 (98%), Gaps = 32/1679 (1%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 Query: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 Query: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 Query: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP Sbjct: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 Query: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 Query: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG Sbjct: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 Query: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV Sbjct: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 Query: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL Sbjct: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 Query: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK Sbjct: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 Query: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG Sbjct: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 Query: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES Sbjct: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 Query: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV Sbjct: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 Query: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE Sbjct: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 Query: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA Sbjct: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 Query: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH Sbjct: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 Query: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE Sbjct: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 Query: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD Sbjct: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD Sbjct: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS Sbjct: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 Query: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440 DSLTEKQWL KAIEEGTLEEIEEEVRQKK Sbjct: 1381 DSLTEKQWL--------------------------------KAIEEGTLEEIEEEVRQKK 1408 Query: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA Sbjct: 1409 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1468 Query: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD Sbjct: 1469 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1528 Query: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES Sbjct: 1529 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1588 Query: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED Sbjct: 1589 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1647 >gi|21071056 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B [Homo sapiens] Length = 1647 Score = 3311 bits (8584), Expect = 0.0 Identities = 1647/1679 (98%), Positives = 1647/1679 (98%), Gaps = 32/1679 (1%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 Query: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 Query: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 Query: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP Sbjct: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 Query: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 Query: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG Sbjct: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 Query: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV Sbjct: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 Query: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL Sbjct: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 Query: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK Sbjct: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 Query: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG Sbjct: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 Query: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES Sbjct: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 Query: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV Sbjct: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 Query: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE Sbjct: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 Query: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA Sbjct: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 Query: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH Sbjct: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 Query: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE Sbjct: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 Query: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD Sbjct: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD Sbjct: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS Sbjct: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 Query: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440 DSLTEKQWL KAIEEGTLEEIEEEVRQKK Sbjct: 1381 DSLTEKQWL--------------------------------KAIEEGTLEEIEEEVRQKK 1408 Query: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA Sbjct: 1409 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1468 Query: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD Sbjct: 1469 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1528 Query: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES Sbjct: 1529 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1588 Query: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED Sbjct: 1589 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1647 >gi|192807314 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform C [Homo sapiens] Length = 1617 Score = 3227 bits (8368), Expect = 0.0 Identities = 1615/1679 (96%), Positives = 1616/1679 (96%), Gaps = 62/1679 (3%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 Query: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 Query: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 Query: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP Sbjct: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 Query: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 Query: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG Sbjct: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 Query: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV Sbjct: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 Query: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL Sbjct: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 Query: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK Sbjct: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 Query: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG Sbjct: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 Query: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES Sbjct: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 Query: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV Sbjct: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 Query: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE Sbjct: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 Query: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA Sbjct: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 Query: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH Sbjct: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 Query: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE Sbjct: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 Query: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD Sbjct: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE-- 1258 Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 EEDEVPDDETVNQMIARHEEEFDLFMRMD Sbjct: 1259 -------------------------------EEDEVPDDETVNQMIARHEEEFDLFMRMD 1287 Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS Sbjct: 1288 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1347 Query: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440 DSLTEKQWLK + KAIEEGTLEEIEEEVRQKK Sbjct: 1348 DSLTEKQWLKTL-----------------------------KAIEEGTLEEIEEEVRQKK 1378 Query: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA Sbjct: 1379 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1438 Query: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD Sbjct: 1439 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1498 Query: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES Sbjct: 1499 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1558 Query: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED Sbjct: 1559 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1617 >gi|192807318 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform E [Homo sapiens] Length = 1614 Score = 3224 bits (8359), Expect = 0.0 Identities = 1614/1679 (96%), Positives = 1614/1679 (96%), Gaps = 65/1679 (3%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 Query: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 Query: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 Query: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP Sbjct: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 Query: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 Query: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG Sbjct: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 Query: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV Sbjct: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 Query: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL Sbjct: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 Query: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK Sbjct: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 Query: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG Sbjct: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 Query: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES Sbjct: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 Query: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV Sbjct: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 Query: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE Sbjct: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 Query: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA Sbjct: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 Query: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH Sbjct: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 Query: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE Sbjct: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 Query: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD Sbjct: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE-- 1258 Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 EEDEVPDDETVNQMIARHEEEFDLFMRMD Sbjct: 1259 -------------------------------EEDEVPDDETVNQMIARHEEEFDLFMRMD 1287 Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS Sbjct: 1288 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1347 Query: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440 DSLTEKQWL KAIEEGTLEEIEEEVRQKK Sbjct: 1348 DSLTEKQWL--------------------------------KAIEEGTLEEIEEEVRQKK 1375 Query: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA Sbjct: 1376 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1435 Query: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD Sbjct: 1436 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1495 Query: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES Sbjct: 1496 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1555 Query: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED Sbjct: 1556 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1614 >gi|192807316 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform D [Homo sapiens] Length = 1616 Score = 3221 bits (8352), Expect = 0.0 Identities = 1614/1679 (96%), Positives = 1615/1679 (96%), Gaps = 63/1679 (3%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 Query: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 Query: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 Query: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP Sbjct: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 Query: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 Query: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG Sbjct: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 Query: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV Sbjct: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 Query: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL Sbjct: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 Query: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK Sbjct: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 Query: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG Sbjct: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 Query: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES Sbjct: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 Query: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV Sbjct: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 Query: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE Sbjct: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 Query: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA Sbjct: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 Query: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH Sbjct: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 Query: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE Sbjct: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 Query: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD Sbjct: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE-- 1258 Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 EEDEVPDDETVNQMIARHEEEFDLFMRMD Sbjct: 1259 -------------------------------EEDEVPDDETVNQMIARHEEEFDLFMRMD 1287 Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS Sbjct: 1288 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1347 Query: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440 DSLTEKQWLK + KAIEEGTLEEIEEEVRQKK Sbjct: 1348 DSLTEKQWLKTL-----------------------------KAIEEGTLEEIEEEVRQKK 1378 Query: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA Sbjct: 1379 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1438 Query: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 VIKYKD SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD Sbjct: 1439 VIKYKD-SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1497 Query: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES Sbjct: 1498 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1557 Query: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED Sbjct: 1558 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1616 >gi|192807320 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform F [Homo sapiens] Length = 1613 Score = 3218 bits (8343), Expect = 0.0 Identities = 1613/1679 (96%), Positives = 1613/1679 (96%), Gaps = 66/1679 (3%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG 60 Query: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 Query: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL 180 Query: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP Sbjct: 181 RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP 240 Query: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300 Query: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG Sbjct: 301 KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG 360 Query: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV Sbjct: 361 LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV 420 Query: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL Sbjct: 421 VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL 480 Query: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK Sbjct: 481 QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK 540 Query: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG Sbjct: 541 LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG 600 Query: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES Sbjct: 601 PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES 660 Query: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV Sbjct: 661 GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV 720 Query: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE Sbjct: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780 Query: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA Sbjct: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840 Query: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH Sbjct: 841 RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 Query: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE Sbjct: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 Query: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD Sbjct: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 Query: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG Sbjct: 1021 GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG 1080 Query: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK Sbjct: 1081 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1140 Query: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR Sbjct: 1141 TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200 Query: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR 1260 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE Sbjct: 1201 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE-- 1258 Query: 1261 HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD 1320 EEDEVPDDETVNQMIARHEEEFDLFMRMD Sbjct: 1259 -------------------------------EEDEVPDDETVNQMIARHEEEFDLFMRMD 1287 Query: 1321 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1380 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS Sbjct: 1288 LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS 1347 Query: 1381 DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK 1440 DSLTEKQWL KAIEEGTLEEIEEEVRQKK Sbjct: 1348 DSLTEKQWL--------------------------------KAIEEGTLEEIEEEVRQKK 1375 Query: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA Sbjct: 1376 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1435 Query: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 VIKYKD SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD Sbjct: 1436 VIKYKD-SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1494 Query: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1620 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES Sbjct: 1495 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES 1554 Query: 1621 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED Sbjct: 1555 ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1613 >gi|48255900 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform a [Homo sapiens] Length = 1590 Score = 2379 bits (6166), Expect = 0.0 Identities = 1246/1715 (72%), Positives = 1369/1715 (79%), Gaps = 163/1715 (9%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 58 MSTP P G P PGPSPGPGPSPG +LGPSPGP SPGS HSMMGPSPGPPS HP+PT Sbjct: 1 MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT 59 Query: 59 QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 118 G +PQ+ MHQMHKP++ +H+KG+ +D MKG GMR H GMGPP SPMDQHSQ Sbjct: 60 MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP-HPGMGPPQSPMDQHSQ 118 Query: 119 GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174 GY PSPLG EH SSP+ GP+ PQM GA + G DPQA+ Q NRGP+PF+ Sbjct: 119 GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP 176 Query: 175 NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPG- 233 QLHQLRAQI+AYKMLARGQPLP+ LQ+AVQGKR +PG+QQQ Sbjct: 177 VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQ 236 Query: 234 -------PGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPE 286 P P PA NY+RP G PG GP Sbjct: 237 QQPQQQPPQPQTQQQQQPALVNYNRPSG------------------PGPELSGP------ 272 Query: 287 GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV--PPAASPVMPPQTQSPGQPAQPAPMVP 344 STPQKL P P GRPSPAPPA PPAA+ V P P P QP+P++ Sbjct: 273 ----------STPQKLPVPAPGGRPSPAPPAAAQPPAAA-VPGPSVPQPA-PGQPSPVLQ 320 Query: 345 LHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIEL 404 L QKQSRI+PIQKP+GLDPVEILQEREYRLQARIAHRIQELENLPGSL DLRTKAT+EL Sbjct: 321 LQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVEL 380 Query: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464 KALRLLNFQRQLRQEVV CMRRDT LETALN+KAYKRSKRQ+LREAR+TEKLEKQQKIEQ Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440 Query: 465 ERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEK 524 ERKRRQKHQEYLNSILQHAKDFKEYHRSV GKIQKL+KAVAT+HANTEREQKKE ERIEK Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEK 500 Query: 525 ERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKK 584 ERMRRLMAEDEEGYRKLIDQKKD+RLAYLLQQTDEYVANLT LV +HK AQ AKEKKK++ Sbjct: 501 ERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR 560 Query: 585 KKKKA--ENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAW 642 ++KK ENAEG A+GPDGEP+DE+SQMSDLPVKV H E+GK+L G +APKA QL+AW Sbjct: 561 RRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAW 620 Query: 643 LEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVD 702 LEMNPGYEVAPRSDSEES S+ EEE+EEEE + E+K + DP+S++VSE D Sbjct: 621 LEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQET-------EEKILLDPNSEEVSEKD 673 Query: 703 ARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGL 762 A+ IIE AKQDVDDEY + Q ARG QSYY VAHA++ERV+KQSAL++NG LK YQ++GL Sbjct: 674 AKQIIETAKQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGL 732 Query: 763 EWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEF 822 EW+VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR+NGP+LIIVPLSTLSNW YEF Sbjct: 733 EWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEF 792 Query: 823 DKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE 882 DKWAPSVVK+SYKG+PA RR+ VPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE Sbjct: 793 DKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE 852 Query: 883 GHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 942 GHRMKNHHCKLTQVLNTHYVAPRR+LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW Sbjct: 853 GHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 912 Query: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002 FNAPFAMTGE+VDLNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEYVIKCDMSA Sbjct: 913 FNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSA 972 Query: 1003 LQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEH 1062 LQ++LYRHMQAKG+LLTDGSEKDKKGKGG KTLMNTIMQLRKICNHPYMFQHIEESF+EH Sbjct: 973 LQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEH 1032 Query: 1063 LGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFK 1122 LG++ G++ G +LYRASGKFELLDRILPKLRATNH+VLLFCQMTSLMTIMEDYFA+R F Sbjct: 1033 LGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFL 1092 Query: 1123 YLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ 1182 YLRLDGTTK+EDR LLK FNEPGS+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQ Sbjct: 1093 YLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQ 1152 Query: 1183 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE 1242 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE Sbjct: 1153 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE 1212 Query: 1243 RRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETV 1302 RRAFLQAILEHEE++E EEDEVPDDET+ Sbjct: 1213 RRAFLQAILEHEEENE---------------------------------EEDEVPDDETL 1239 Query: 1303 NQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE 1362 NQMIAR EEEFDLFMRMD+DRRRE+ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE Sbjct: 1240 NQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE 1299 Query: 1363 EEKMFGRGSRHRKEVDYSDSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASK 1422 EEK+FGRGSR R++VDYSD+LTEKQWL + Sbjct: 1300 EEKIFGRGSRQRRDVDYSDALTEKQWL--------------------------------R 1327 Query: 1423 AIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEK 1482 AIE+G LEE+EEEVR KK R+R D D K+D K +K+RGRPPAEK Sbjct: 1328 AIEDGNLEEMEEEVRLKKRKRRRNVDKDPA------------KEDVEKAKKRRGRPPAEK 1375 Query: 1483 LSPNPPNLTKKMKKIVDAVIKYKD-----------------SSSGRQLSEVFIQLPSRKE 1525 LSPNPP LTK+M I+D VI YKD +SSGRQLSEVFIQLPSRKE Sbjct: 1376 LSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKE 1435 Query: 1526 LPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVL 1585 LPEYYELIRKPVDFKKIKERIRNHKYRSL DLEKDVMLLC NAQTFNLEGS IYEDSIVL Sbjct: 1436 LPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVL 1495 Query: 1586 QSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRK-EKAQDRLKGG 1644 QSVF S RQKI KE++SE E +EEEEE +EE SESE++SVKVKIKL +K +K +D+ K G Sbjct: 1496 QSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGK-G 1554 Query: 1645 RRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1679 ++RP+RG +AKPVVSD DS+EEQ+E GS D Sbjct: 1555 KKRPNRG-KAKPVVSDFDSDEEQDEREQSEGSGTD 1588 >gi|48255898 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b [Homo sapiens] Length = 1572 Score = 2370 bits (6141), Expect = 0.0 Identities = 1240/1696 (73%), Positives = 1360/1696 (80%), Gaps = 143/1696 (8%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 58 MSTP P G P PGPSPGPGPSPG +LGPSPGP SPGS HSMMGPSPGPPS HP+PT Sbjct: 1 MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT 59 Query: 59 QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 118 G +PQ+ MHQMHKP++ +H+KG+ +D MKG GMR H GMGPP SPMDQHSQ Sbjct: 60 MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRP-PHPGMGPPQSPMDQHSQ 118 Query: 119 GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 174 GY PSPLG EH SSP+ GP+ PQM GA + G DPQA+ Q NRGP+PF+ Sbjct: 119 GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP 176 Query: 175 NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGM--------QQQMPTLPPPSVS 226 QLHQLRAQI+AYKMLARGQPLP+ LQ+AVQGKR +PG+ QQQ Sbjct: 177 VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQ 236 Query: 227 ATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPE 286 P P PA NY+RP GP GPS P +P PGG P P P Sbjct: 237 QQPQQQPPQPQTQQQQQPALVNYNRP---SGPGPELSGPS-TPQKLPVPAPGGRPSPAPP 292 Query: 287 GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLH 346 AAA QP P P PA P QP+P++ L Sbjct: 293 -----AAA-----------QPPAAAVPGPSVPQPA--------------PGQPSPVLQLQ 322 Query: 347 QKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKA 406 QKQSRI+PIQKP+GLDPVEILQEREYRLQARIAHRIQELENLPGSL DLRTKAT+ELKA Sbjct: 323 QKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKA 382 Query: 407 LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER 466 LRLLNFQRQLRQEVV CMRRDT LETALN+KAYKRSKRQ+LREAR+TEKLEKQQKIEQER Sbjct: 383 LRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQER 442 Query: 467 KRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKER 526 KRRQKHQEYLNSILQHAKDFKEYHRSV GKIQKL+KAVAT+HANTEREQKKE ERIEKER Sbjct: 443 KRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKER 502 Query: 527 MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKK--KK 584 MRRLMAEDEEGYRKLIDQKKD+RLAYLLQQTDEYVANLT LV +HK AQ AKEKKK ++ Sbjct: 503 MRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRR 562 Query: 585 KKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLE 644 KKK ENAEG A+GPDGEP+DE+SQMSDLPVKV H E+GK+L G +APKA QL+AWLE Sbjct: 563 KKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLE 622 Query: 645 MNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDAR 704 MNPGYEVAPRSDSEES S+ EEE+EEEE + E+K + DP+S++VSE DA+ Sbjct: 623 MNPGYEVAPRSDSEESDSDYEEEDEEEESSRQE-------TEEKILLDPNSEEVSEKDAK 675 Query: 705 HIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEW 764 IIE AKQDVDDEY + Q ARG QSYY VAHA++ERV+KQSAL++NG LK YQ++GLEW Sbjct: 676 QIIETAKQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEW 734 Query: 765 LVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDK 824 +VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR+NGP+LIIVPLSTLSNW YEFDK Sbjct: 735 MVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDK 794 Query: 825 WAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGH 884 WAPSVVK+SYKG+PA RR+ VPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGH Sbjct: 795 WAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGH 854 Query: 885 RMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFN 944 RMKNHHCKLTQVLNTHYVAPRR+LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFN Sbjct: 855 RMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFN 914 Query: 945 APFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ 1004 APFAMTGE+VDLNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEYVIKCDMSALQ Sbjct: 915 APFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQ 974 Query: 1005 RVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG 1064 ++LYRHMQAKG+LLTDGSEKDKKGKGG KTLMNTIMQLRKICNHPYMFQHIEESF+EHLG Sbjct: 975 KILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLG 1034 Query: 1065 FTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYL 1124 ++ G++ G +LYRASGKFELLDRILPKLRATNH+VLLFCQMTSLMTIMEDYFA+R F YL Sbjct: 1035 YSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYL 1094 Query: 1125 RLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDL 1184 RLDGTTK+EDR LLK FNEPGS+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDL Sbjct: 1095 RLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDL 1154 Query: 1185 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERR 1244 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERR Sbjct: 1155 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERR 1214 Query: 1245 AFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQ 1304 AFLQAILEHEE++E EEDEVPDDET+NQ Sbjct: 1215 AFLQAILEHEEENE---------------------------------EEDEVPDDETLNQ 1241 Query: 1305 MIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEE 1364 MIAR EEEFDLFMRMD+DRRRE+ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEE Sbjct: 1242 MIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEE 1301 Query: 1365 KMFGRGSRHRKEVDYSDSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAI 1424 K+FGRGSR R++VDYSD+LTEKQWL +AI Sbjct: 1302 KIFGRGSRQRRDVDYSDALTEKQWL--------------------------------RAI 1329 Query: 1425 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLS 1484 E+G LEE+EEEVR KK R+R D D K+D K +K+RGRPPAEKLS Sbjct: 1330 EDGNLEEMEEEVRLKKRKRRRNVDKDPA------------KEDVEKAKKRRGRPPAEKLS 1377 Query: 1485 PNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1544 PNPP LTK+M I+D VI YKD SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE Sbjct: 1378 PNPPKLTKQMNAIIDTVINYKD-SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1436 Query: 1545 RIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEG 1604 RIRNHKYRSL DLEKDVMLLC NAQTFNLEGS IYEDSIVLQSVF S RQKI KE++SE Sbjct: 1437 RIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1496 Query: 1605 EESEEEEEGEEEGSESESRSVKVKIKLGRK-EKAQDRLKGGRRRPSRGSRAKPVVSDDDS 1663 E +EEEEE +EE SESE++SVKVKIKL +K +K +D+ K G++RP+RG +AKPVVSD DS Sbjct: 1497 ESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGK-GKKRPNRG-KAKPVVSDFDS 1554 Query: 1664 EEEQEEDRSGSGSEED 1679 +EEQ+E GS D Sbjct: 1555 DEEQDEREQSEGSGTD 1570 >gi|164419749 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform b [Homo sapiens] Length = 1042 Score = 470 bits (1209), Expect = e-132 Identities = 271/643 (42%), Positives = 377/643 (58%), Gaps = 58/643 (9%) Query: 621 HVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS---EEEEEEEEEEQPQAA 677 +V S ++ APK+ + EM+P YE ++D + ++ E QP A Sbjct: 60 NVSSFQLKLAAKAPKSEK-----EMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQ 114 Query: 678 QPPTLPVEEKKKIPDPDSDD----VSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYA 733 + PT P+ K P D+ +S D RH +Q+ D+E L S Sbjct: 115 KSPTSPLNMKLGRPRIKKDEKQSLISAGDYRH--RRTEQEEDEE----------LLSESR 162 Query: 734 VAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793 V R + + + G L+ YQI+GL WL+SLY N +NGILADEMGLGKT+QTIAL+ Sbjct: 163 KTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALL 222 Query: 794 TYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV-PQLRSGK 852 YL ++ I GP +++VP STL NW EF +W PS+ + + G AR AF+ ++ G+ Sbjct: 223 GYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE 282 Query: 853 FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGT 912 ++V +T+YE +IK+K + K W+Y+++DE HR+KN KL++++ + + RLLLTGT Sbjct: 283 WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVR-EFKSTNRLLLTGT 341 Query: 913 PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL 972 PLQN L ELWALLNFLLP +F S F+ WF+ + +K ++ RLH VL Sbjct: 342 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQK----------LVERLHAVL 391 Query: 973 RPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT 1032 +PFLLRR+K +VE LP K E I +S +QR Y +L+ D + GK Sbjct: 392 KPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMDK 446 Query: 1033 KTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088 L+N +MQLRK CNHPY+F E + EH+ SGK +LD++ Sbjct: 447 MRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHI------------VSNSGKMVVLDKL 494 Query: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148 L KL+ +VL+F QMT L+ I+EDY +RG++Y RLDG T E+R ++ FN P S Sbjct: 495 LAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNAPNSS 554 Query: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN 1208 FIF+LSTRAGGLG+NL SAD VI++DSDWNP DLQA DRAHRIGQ+ VRV RL T N Sbjct: 555 KFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDN 614 Query: 1209 SVEEKILAAAKYKLNVDQKVIQAG-MFDQKSSSHERRAFLQAI 1250 +VEE+I+ A+ KL +D VIQ G + DQ+S+ + LQ I Sbjct: 615 TVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 657 >gi|21071044 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a [Homo sapiens] Length = 1054 Score = 461 bits (1186), Expect = e-129 Identities = 271/655 (41%), Positives = 377/655 (57%), Gaps = 70/655 (10%) Query: 621 HVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS---EEEEEEEEEEQPQAA 677 +V S ++ APK+ + EM+P YE ++D + ++ E QP A Sbjct: 60 NVSSFQLKLAAKAPKSEK-----EMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQ 114 Query: 678 QPPTLPVEEKKKIPDPDSDD----VSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYA 733 + PT P+ K P D+ +S D RH +Q+ D+E L S Sbjct: 115 KSPTSPLNMKLGRPRIKKDEKQSLISAGDYRH--RRTEQEEDEE----------LLSESR 162 Query: 734 VAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793 V R + + + G L+ YQI+GL WL+SLY N +NGILADEMGLGKT+QTIAL+ Sbjct: 163 KTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALL 222 Query: 794 TYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV-PQLRSGK 852 YL ++ I GP +++VP STL NW EF +W PS+ + + G AR AF+ ++ G+ Sbjct: 223 GYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE 282 Query: 853 FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGT 912 ++V +T+YE +IK+K + K W+Y+++DE HR+KN KL++++ + + RLLLTGT Sbjct: 283 WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVR-EFKSTNRLLLTGT 341 Query: 913 PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL 972 PLQN L ELWALLNFLLP +F S F+ WF+ + +K ++ RLH VL Sbjct: 342 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQK----------LVERLHAVL 391 Query: 973 RPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT 1032 +PFLLRR+K +VE LP K E I +S +QR Y +L+ D + GK Sbjct: 392 KPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMDK 446 Query: 1033 KTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088 L+N +MQLRK CNHPY+F E + EH+ SGK +LD++ Sbjct: 447 MRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHI------------VSNSGKMVVLDKL 494 Query: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRG------------ 1136 L KL+ +VL+F QMT L+ I+EDY +RG++Y RLDG T E+R Sbjct: 495 LAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQR 554 Query: 1137 MLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ 1196 ++ FN P S FIF+LSTRAGGLG+NL SAD VI++DSDWNP DLQA DRAHRIGQ+ Sbjct: 555 EAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQK 614 Query: 1197 NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG-MFDQKSSSHERRAFLQAI 1250 VRV RL T N+VEE+I+ A+ KL +D VIQ G + DQ+S+ + LQ I Sbjct: 615 KPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMI 669 >gi|21071058 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 [Homo sapiens] Length = 1052 Score = 449 bits (1155), Expect = e-125 Identities = 259/628 (41%), Positives = 363/628 (57%), Gaps = 45/628 (7%) Query: 632 DAPKAGQLEAWLEMNPGYEVAPRSDSE---ESGSEEEEEEEEEEQPQAAQPPTLPVEEKK 688 D G+ + E +P YE ++D E ++ E QP A + PT P++ K Sbjct: 63 DDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKP 122 Query: 689 KIPDPDSDD----VSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDK 744 P D+ +S D RH +Q+ D+E L + + A V R + Sbjct: 123 GRPRIKKDEKQNLLSVGDYRH--RRTEQEEDEE----------LLTESSKATNVCTRFED 170 Query: 745 QSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRING 804 + + G L+ YQ++GL WL+SLY N +NGILADEMGLGKT+QTI+L+ Y+ ++ I G Sbjct: 171 SPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPG 230 Query: 805 PFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYI 863 P +++VP STL NW EF +W P++ V G R AFV L G+++V +T+YE + Sbjct: 231 PHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEML 290 Query: 864 IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWA 923 IK+K + K W+Y+++DE HR+KN KL++++ + RLLLTGTPLQN L ELW+ Sbjct: 291 IKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWS 349 Query: 924 LLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKE 983 LLNFLLP +F S F+ WF+ + +K ++ RLH VLRPFLLRR+K + Sbjct: 350 LLNFLLPDVFNSADDFDSWFDTNNCLGDQK----------LVERLHMVLRPFLLRRIKAD 399 Query: 984 VEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLR 1043 VE LP K E I +S +QR Y +L+ D + GK L+N +MQLR Sbjct: 400 VEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKMDKMRLLNILMQLR 454 Query: 1044 KICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFC 1103 K CNHPY+F E + L SGK +LD++LPKL+ +VL+F Sbjct: 455 KCCNHPYLFDGAEPG--------PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFS 506 Query: 1104 QMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGL 1163 QMT ++ I+EDY +R ++Y RLDG T ++R + +NEP S F+F+LSTRAGGLG+ Sbjct: 507 QMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGI 566 Query: 1164 NLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLN 1223 NL +AD VI++DSDWNP DLQA DRAHRIGQ VRV R T N+VEE+I+ A+ KL Sbjct: 567 NLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLR 626 Query: 1224 VDQKVIQAG-MFDQKSSSHERRAFLQAI 1250 +D VIQ G + DQ + + LQ I Sbjct: 627 LDSIVIQQGRLVDQNLNKIGKDEMLQMI 654 >gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1 [Homo sapiens] Length = 1828 Score = 395 bits (1016), Expect = e-109 Identities = 290/857 (33%), Positives = 426/857 (49%), Gaps = 117/857 (13%) Query: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813 L+ YQ++GL WL + N + ILADEMGLGKTIQTI+ ++YL ++ GPFLI+VPLS Sbjct: 484 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543 Query: 814 TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVP------QLRSGKFNVLLTTYEYIIKDK 867 TL++W EF+ WAP + V Y G +R Q + KFN L+TTYE ++KDK Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 603 Query: 868 HILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNF 927 +L I W ++ VDE HR+KN L + L + + RLL+TGTPLQN L ELW+LL+F Sbjct: 604 TVLGSINWAFLGVDEAHRLKNDDSLLYKTL-IDFKSNHRLLITGTPLQNSLKELWSLLHF 662 Query: 928 LLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQ 987 ++P F+ FE E E + LHKVL PFLLRR+KK+VE Sbjct: 663 IMPEKFEFWEDFE-----------EDHGKGRENGY---QSLHKVLEPFLLRRVKKDVEKS 708 Query: 988 LPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICN 1047 LP KVE +++ +MSALQ+ Y K +L + K +G T +N +M+L+K CN Sbjct: 709 LPAKVEQILRVEMSALQKQYY-----KWILTRNYKALAKGTRGSTSGFLNIVMELKKCCN 763 Query: 1048 HPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTS 1107 H Y+ + EE+ E+ G L L R+SGK LLD++L +LR ++VL+F QM Sbjct: 764 HCYLIKPPEENEREN-----GQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVR 818 Query: 1108 LMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS 1167 ++ I+ +Y + + + RLDG+ K E R L FN GSE F FLLSTRAGGLG+NL S Sbjct: 819 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 878 Query: 1168 ADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQK 1227 ADTV+IFDSDWNP DLQAQ RAHRIGQ+ +V + RL T +VEE+I+ AK K+ +D Sbjct: 879 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 938 Query: 1228 VIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEE 1287 VIQ D + ILE+ SG ++ Sbjct: 939 VIQ--RMDTTG---------RTILEN-----------NSGRSN---------------SN 961 Query: 1288 PPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWI 1347 P KEE + E E MD+D A + + DEL S Sbjct: 962 PFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLS-- 1019 Query: 1348 IKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKKITGKDIHDTASSVARG 1407 +V E+EE++ R D+ + + E+Q KK+ ++ + Sbjct: 1020 ---QFKVANFATMEDEEEL-----EERPHKDWDEIIPEEQ-RKKVEEEERQKELEEI--- 1067 Query: 1408 LQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDD 1467 R + ++ + + + +S R+ +R S + S T + D Sbjct: 1068 -------YMLPRIRSSTKKAQTNDSDSDT---ESKRQAQRSSASESET--------EDSD 1109 Query: 1468 ESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELP 1527 + KK K+RGRP + + ++++ + A K+ + L + + Sbjct: 1110 DDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFG------------LPLERLECIA 1157 Query: 1528 EYYELIRKPV-DFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQ 1586 EL+ K V D K++ E I N ++ + E+ L +NA G +I + Sbjct: 1158 RDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQ---LKENASEGKGPGKR-RGPTIKIS 1213 Query: 1587 SVFTSVRQKIEKEDDSE 1603 V +V+ I+ E++ E Sbjct: 1214 GVQVNVKSIIQHEEEFE 1230 Score = 40.0 bits (92), Expect = 0.019 Identities = 53/240 (22%), Positives = 104/240 (43%), Gaps = 25/240 (10%) Query: 1436 VRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMK 1495 +R K S++ + +S+ + S + D S+ + ++G P + ++ + Sbjct: 2 MRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSE 61 Query: 1496 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN-HKYRSL 1554 ++ + S+G + V LP KE P + + D KK+ E + + R Sbjct: 62 SQSES----ESESAGSKSQPV---LPEAKEKPASKK--ERIADVKKMWEEYPDVYGVRRS 112 Query: 1555 NDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVR--QKIEKEDDSEGEESEEEEE 1612 N Q FN++ E S +S R ++++K++ + E SE+E+E Sbjct: 113 NRSR-------QEPSRFNIKE----EASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQE 161 Query: 1613 -GEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDR 1671 G SE E + VK + + R+ + R+K + + RG R K SD+D ++++ R Sbjct: 162 QGTSAESEPEQKKVKARRPVPRRTVPKPRVK-KQPKTQRGKRKKQDSSDEDDDDDEAPKR 220 Score = 34.3 bits (77), Expect = 1.0 Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 32/240 (13%) Query: 473 QEYLNSILQHAKDFKEYHRSV-----TGKIQKLTKAVATYHANTEREQKKENERIEKERM 527 Q + SI+QH ++F+ H+S+ K LT V H + E + ++ Sbjct: 1216 QVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVEWGVEDDS-------- 1267 Query: 528 RRLMAEDEEGY---------------RKLIDQKKDKR-LAYLLQQTDEYVANLTELVRQH 571 R L+ E GY K++ + DK+ LQ +Y+ L + Sbjct: 1268 RLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKLLRKGLEK 1327 Query: 572 KAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGT 631 K A E+ K KK+K E + P + + + + SD P + V+ + Sbjct: 1328 KGAVTGGEEAKLKKRKPRVKKENKVPRLKEEHGIELSSPRHSDNPSEEGEVKDDGLEKSP 1387 Query: 632 DAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIP 691 K + E + N +++ R D +E E ++ ++++E+P++ + ++ + P Sbjct: 1388 MKKKQKKKEN--KENKEKQMSSRKD-KEGDKERKKSKDKKEKPKSGDAKSSSKSKRSQGP 1444 Score = 33.9 bits (76), Expect = 1.4 Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 1/91 (1%) Query: 1578 IYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKA 1637 + +D + + ++K KE+ + S +++EG++E +S+ + K K K + Sbjct: 1378 VKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPK-SGDAKSSS 1436 Query: 1638 QDRLKGGRRRPSRGSRAKPVVSDDDSEEEQE 1668 + + G + GS P+ D+D + +QE Sbjct: 1437 KSKRSQGPVHITAGSEPVPIGEDEDDDLDQE 1467 >gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sapiens] Length = 1954 Score = 392 bits (1007), Expect = e-108 Identities = 268/773 (34%), Positives = 399/773 (51%), Gaps = 111/773 (14%) Query: 739 TERVDKQSALM--VNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796 T + DKQ + G L YQ++GL WL + + ILADEMGLGKT+QTI + L Sbjct: 683 TVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSL 742 Query: 797 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--------L 848 + GP+L+ PLST+ NW EF+ WAP V+Y G +R + Sbjct: 743 YKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAI 802 Query: 849 RSGK------------FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896 RSGK F+VLLT+YE I D+ IL I W ++VDE HR+KN+ K +V Sbjct: 803 RSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRV 862 Query: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956 LN+ Y +LLLTGTPLQN L EL+ LLNFL P F + F + F D+ Sbjct: 863 LNS-YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADI 911 Query: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGV 1016 ++E+ I ++LH +L P +LRRLK +V +P K E +++ ++S +Q+ Y K + Sbjct: 912 SKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY-----KFI 963 Query: 1017 LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLY 1076 L + + KG G +L+N +M L+K CNHPY+F + E G G L Sbjct: 964 LTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFP---VAAVEAPVLPNGSYDGSSLV 1020 Query: 1077 RASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRG 1136 ++SGK LL ++L KLR H+VL+F QMT ++ ++ED+ Y G+KY R+DG R Sbjct: 1021 KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ 1080 Query: 1137 MLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ 1196 + FN PG++ F FLLSTRAGGLG+NL +ADTVII+DSDWNPH D+QA RAHRIGQ Sbjct: 1081 EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN 1140 Query: 1197 NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ 1256 +V + R T SVEE+I AK K+ + V++ G+ + S ++ L IL+ + Sbjct: 1141 KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQE--LDDILKFGTE 1198 Query: 1257 D-----------------------ESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEE 1293 + +S + SA H + PP G N D+E+ + Sbjct: 1199 ELFKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPP-GDNKDVEDSSVIHY 1257 Query: 1294 DEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEE----DELPSWIIK 1349 DD +++++ R+++ D +L E + K ++ E +E+ IIK Sbjct: 1258 ----DDAAISKLLDRNQDATD---DTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIK 1310 Query: 1350 DDAEVE--------RLTCEEEEEKM---FGRGSRHRKEVDYSDSLTEKQ-WLKKITGKDI 1397 + V+ R E+++E + G+G R RK+V+Y+D+ E Q W +++ Sbjct: 1311 QEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELS---- 1366 Query: 1398 HDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKKSSRKRKRDSD 1450 D S + G S+ +E E E + +++S R+ K D D Sbjct: 1367 -DNQSEYSIG-------------SEDEDEDFEERPEGQSGRRQSRRQLKSDRD 1405 >gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1 [Homo sapiens] Length = 2000 Score = 388 bits (997), Expect = e-107 Identities = 310/1006 (30%), Positives = 465/1006 (46%), Gaps = 155/1006 (15%) Query: 752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811 G L YQ++GL WL + + ILADEMGLGKTIQTI + L + GPFL+ P Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793 Query: 812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-------------------RAFVPQLRSG- 851 LST+ NW EF WAP V+Y G +R +AF + + Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853 Query: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911 KF+VLLT+YE I D+ L IRW ++VDE HR+KN+ K +VLN Y +LLLTG Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNG-YKIDHKLLLTG 912 Query: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971 TPLQN L EL+ LLNFL P F + F + F D+++E+ I ++LH + Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 959 Query: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031 L P +LRRLK +V +P K E +++ ++S +Q+ Y++ +L + + +G G Sbjct: 960 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKY-----ILTRNFEALNSRGGGN 1014 Query: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091 +L+N +M L+K CNHPY+F + E G +G L ++SGK LL ++L K Sbjct: 1015 QVSLLNIMMDLKKCCNHPYLFP---VAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1071 Query: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151 L+ H+VL+F QMT ++ ++ED+ Y G+KY R+DG R + FN PG++ F Sbjct: 1072 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1131 Query: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211 FLLSTRAGGLG+NL +ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R T SVE Sbjct: 1132 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1191 Query: 1212 EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF 1271 E+I AK K+ + V++ G+ + S ++ L IL+ ++ Sbjct: 1192 ERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQE--LDDILKFGTEE-------------- 1235 Query: 1272 AHTAPPPAGVNPDLEEPPLKEEDEVP---DDETVNQMIARHEEEFDLFMRMDLDRRREEA 1328 + D E KEED D+E + +++ R++ D D+ E Sbjct: 1236 ---------LFKDENEGENKEEDSSVIHYDNEAIARLLDRNQ---DATEDTDVQNMNEYL 1283 Query: 1329 RNPKRKPRLMEE----DELPSWIIKDDAEVE--------RLTCEEEEEKM---FGRGSRH 1373 + K ++ E +E+ IIK + V+ R E+++E + G+G R Sbjct: 1284 SSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRV 1343 Query: 1374 RKEVDYSDSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIE 1433 RK+V+Y+D+ E Q D S + G + E+ +E Sbjct: 1344 RKQVNYNDAAQEDQ-----------DNQSEYSVGSE--------------EEDEDFDERP 1378 Query: 1434 EEVRQKKSSRKRKRD-------SDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPN 1486 E RQ K + ++D + G + +R + + G PP + + Sbjct: 1379 EGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQ 1438 Query: 1487 ------PPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF- 1539 K+ K V +++ G SE F R+ L L R V Sbjct: 1439 WLVRDLRGKTEKEFKAYVSLFMRHL-CEPGADGSETFADGVPREGLSRQQVLTRIGVMSL 1497 Query: 1540 --KKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFN--LEGSLIYEDSIVLQSVFTS---- 1591 KK++E + S+ +L D + + + + S ++ S TS Sbjct: 1498 VKKKVQEFEHINGRWSMPELMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPAT 1557 Query: 1592 ---------VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLG-----RKEKA 1637 +R +EKE+ EE E+ E E+E+ + LG RK Sbjct: 1558 PAPSEKGEGIRTPLEKEEAENQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPL 1617 Query: 1638 QDRLKG--GRRRPS---RGSRAKPVVSDDDSEEEQEEDRSGSGSEE 1678 +D + G G P RG R K E +E+ G E Sbjct: 1618 EDEVPGVPGEMEPEPGYRGDREKSATESTPGERGEEKPLDGQEHRE 1663 Score = 38.5 bits (88), Expect = 0.055 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 20/184 (10%) Query: 511 TEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQ 570 TE K ENE KE ++ D E +L+D+ +D + TD V N+ E + Sbjct: 1233 TEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQD-----ATEDTD--VQNMNEYLSS 1285 Query: 571 HKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD-GEPLDETSQMSDLPVKVIHVESGKILT 629 K AQ ++ K ++ + E + Q + PD E L H E + Sbjct: 1286 FKVAQYVVREEDKIEEIEREIIK-QEENVDPDYWEKLLRH-----------HYEQQQEDL 1333 Query: 630 GTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKK 689 + K ++ + N + + SE S EEE+E+ +E+P+ + + +K Sbjct: 1334 ARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKD 1393 Query: 690 IPDP 693 P P Sbjct: 1394 KPLP 1397 Score = 32.0 bits (71), Expect = 5.2 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 15/117 (12%) Query: 585 KKKKAENAEGQTPAIGPDGEPLD-ETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWL 643 +K++AEN E + GE ++ E S P +E KI + P + + Sbjct: 1572 EKEEAENQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDEVPG---VPGEM 1628 Query: 644 EMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700 E PGY R D E+S +E E EE+P L +E ++ P+ ++ D+ + Sbjct: 1629 EPEPGY----RGDREKSATESTPGERGEEKP-------LDGQEHRERPEGETGDLGK 1674 >gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3 [Homo sapiens] Length = 2059 Score = 388 bits (997), Expect = e-107 Identities = 310/1006 (30%), Positives = 465/1006 (46%), Gaps = 155/1006 (15%) Query: 752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811 G L YQ++GL WL + + ILADEMGLGKTIQTI + L + GPFL+ P Sbjct: 793 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 852 Query: 812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-------------------RAFVPQLRSG- 851 LST+ NW EF WAP V+Y G +R +AF + + Sbjct: 853 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 912 Query: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911 KF+VLLT+YE I D+ L IRW ++VDE HR+KN+ K +VLN Y +LLLTG Sbjct: 913 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNG-YKIDHKLLLTG 971 Query: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971 TPLQN L EL+ LLNFL P F + F + F D+++E+ I ++LH + Sbjct: 972 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 1018 Query: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031 L P +LRRLK +V +P K E +++ ++S +Q+ Y++ +L + + +G G Sbjct: 1019 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKY-----ILTRNFEALNSRGGGN 1073 Query: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091 +L+N +M L+K CNHPY+F + E G +G L ++SGK LL ++L K Sbjct: 1074 QVSLLNIMMDLKKCCNHPYLFP---VAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1130 Query: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151 L+ H+VL+F QMT ++ ++ED+ Y G+KY R+DG R + FN PG++ F Sbjct: 1131 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1190 Query: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211 FLLSTRAGGLG+NL +ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R T SVE Sbjct: 1191 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1250 Query: 1212 EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF 1271 E+I AK K+ + V++ G+ + S ++ L IL+ ++ Sbjct: 1251 ERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQE--LDDILKFGTEE-------------- 1294 Query: 1272 AHTAPPPAGVNPDLEEPPLKEEDEVP---DDETVNQMIARHEEEFDLFMRMDLDRRREEA 1328 + D E KEED D+E + +++ R++ D D+ E Sbjct: 1295 ---------LFKDENEGENKEEDSSVIHYDNEAIARLLDRNQ---DATEDTDVQNMNEYL 1342 Query: 1329 RNPKRKPRLMEE----DELPSWIIKDDAEVE--------RLTCEEEEEKM---FGRGSRH 1373 + K ++ E +E+ IIK + V+ R E+++E + G+G R Sbjct: 1343 SSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRV 1402 Query: 1374 RKEVDYSDSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIE 1433 RK+V+Y+D+ E Q D S + G + E+ +E Sbjct: 1403 RKQVNYNDAAQEDQ-----------DNQSEYSVGSE--------------EEDEDFDERP 1437 Query: 1434 EEVRQKKSSRKRKRD-------SDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPN 1486 E RQ K + ++D + G + +R + + G PP + + Sbjct: 1438 EGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQ 1497 Query: 1487 ------PPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF- 1539 K+ K V +++ G SE F R+ L L R V Sbjct: 1498 WLVRDLRGKTEKEFKAYVSLFMRHL-CEPGADGSETFADGVPREGLSRQQVLTRIGVMSL 1556 Query: 1540 --KKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFN--LEGSLIYEDSIVLQSVFTS---- 1591 KK++E + S+ +L D + + + + S ++ S TS Sbjct: 1557 VKKKVQEFEHINGRWSMPELMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPAT 1616 Query: 1592 ---------VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLG-----RKEKA 1637 +R +EKE+ EE E+ E E+E+ + LG RK Sbjct: 1617 PAPSEKGEGIRTPLEKEEAENQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPL 1676 Query: 1638 QDRLKG--GRRRPS---RGSRAKPVVSDDDSEEEQEEDRSGSGSEE 1678 +D + G G P RG R K E +E+ G E Sbjct: 1677 EDEVPGVPGEMEPEPGYRGDREKSATESTPGERGEEKPLDGQEHRE 1722 Score = 38.5 bits (88), Expect = 0.055 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 20/184 (10%) Query: 511 TEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQ 570 TE K ENE KE ++ D E +L+D+ +D + TD V N+ E + Sbjct: 1292 TEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQD-----ATEDTD--VQNMNEYLSS 1344 Query: 571 HKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD-GEPLDETSQMSDLPVKVIHVESGKILT 629 K AQ ++ K ++ + E + Q + PD E L H E + Sbjct: 1345 FKVAQYVVREEDKIEEIEREIIK-QEENVDPDYWEKLLRH-----------HYEQQQEDL 1392 Query: 630 GTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKK 689 + K ++ + N + + SE S EEE+E+ +E+P+ + + +K Sbjct: 1393 ARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKD 1452 Query: 690 IPDP 693 P P Sbjct: 1453 KPLP 1456 Score = 33.9 bits (76), Expect = 1.4 Identities = 16/30 (53%), Positives = 20/30 (66%) Query: 1597 EKEDDSEGEESEEEEEGEEEGSESESRSVK 1626 E+E++ E SEEEEE EEEG E E V+ Sbjct: 8 EEEEEEEMVVSEEEEEEEEEGDEEEEEEVE 37 Score = 32.0 bits (71), Expect = 5.2 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 15/117 (12%) Query: 585 KKKKAENAEGQTPAIGPDGEPLD-ETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWL 643 +K++AEN E + GE ++ E S P +E KI + P + + Sbjct: 1631 EKEEAENQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDEVPG---VPGEM 1687 Query: 644 EMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700 E PGY R D E+S +E E EE+P L +E ++ P+ ++ D+ + Sbjct: 1688 EPEPGY----RGDREKSATESTPGERGEEKP-------LDGQEHRERPEGETGDLGK 1733 >gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2 [Homo sapiens] Length = 1966 Score = 387 bits (994), Expect = e-107 Identities = 311/1009 (30%), Positives = 468/1009 (46%), Gaps = 158/1009 (15%) Query: 752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811 G L YQ++GL WL + + ILADEMGLGKTIQTI + L + GPFL+ P Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793 Query: 812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAAR-------------------RAFVPQLRSG- 851 LST+ NW EF WAP V+Y G +R +AF + + Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853 Query: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911 KF+VLLT+YE I D+ L IRW ++VDE HR+KN+ K +VLN Y +LLLTG Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNG-YKIDHKLLLTG 912 Query: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971 TPLQN L EL+ LLNFL P F + F + F D+++E+ I ++LH + Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 959 Query: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031 L P +LRRLK +V +P K E +++ ++S +Q+ Y++ +L + + +G G Sbjct: 960 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKY-----ILTRNFEALNSRGGGN 1014 Query: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091 +L+N +M L+K CNHPY+F + E G +G L ++SGK LL ++L K Sbjct: 1015 QVSLLNIMMDLKKCCNHPYLFP---VAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1071 Query: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151 L+ H+VL+F QMT ++ ++ED+ Y G+KY R+DG R + FN PG++ F Sbjct: 1072 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1131 Query: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211 FLLSTRAGGLG+NL +ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R T SVE Sbjct: 1132 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1191 Query: 1212 EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF 1271 E+I AK K+ + V++ G+ + S ++ L IL+ ++ Sbjct: 1192 ERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQE--LDDILKFGTEE-------------- 1235 Query: 1272 AHTAPPPAGVNPDLEEPPLKEEDEVP---DDETVNQMIARHEEEFDLFMRMDLDRRREEA 1328 + D E KEED D+E + +++ R++ D D+ E Sbjct: 1236 ---------LFKDENEGENKEEDSSVIHYDNEAIARLLDRNQ---DATEDTDVQNMNEYL 1283 Query: 1329 RNPKRKPRLMEE----DELPSWIIKDDAEVE--------RLTCEEEEEKM---FGRGSRH 1373 + K ++ E +E+ IIK + V+ R E+++E + G+G R Sbjct: 1284 SSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRV 1343 Query: 1374 RKEVDYSDSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIE 1433 RK+V+Y+D+ E Q D S + G + E+ +E Sbjct: 1344 RKQVNYNDAAQEDQ-----------DNQSEYSVGSE--------------EEDEDFDERP 1378 Query: 1434 EEVRQKKSSRKRKRD-------SDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPN 1486 E RQ K + ++D + G + +R + + G PP + + Sbjct: 1379 EGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQ 1438 Query: 1487 ------PPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF- 1539 K+ K V +++ G SE F R+ L L R V Sbjct: 1439 WLVRDLRGKTEKEFKAYVSLFMRHL-CEPGADGSETFADGVPREGLSRQQVLTRIGVMSL 1497 Query: 1540 --KKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFN--LEGSLIYEDSIVLQSVFTS---- 1591 KK++E + S+ +L D + + + + S ++ S TS Sbjct: 1498 VKKKVQEFEHINGRWSMPELMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPAT 1557 Query: 1592 ---------VRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLG-----RKEKA 1637 +R +EKE+ EE E+ E E+E+ + LG RK Sbjct: 1558 PAPSEKGEGIRTPLEKEEAENQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPL 1617 Query: 1638 QDRLKG--GRRRPSRGSRAKPVVSDDDSEEEQ------EEDRSGSGSEE 1678 +D + G G P G R S+D + + +E RS EE Sbjct: 1618 EDEVPGVPGEMEPEPGYRGDREKSEDVKGDRELRPGPRDEPRSNGRREE 1666 Score = 38.5 bits (88), Expect = 0.055 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 20/184 (10%) Query: 511 TEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQ 570 TE K ENE KE ++ D E +L+D+ +D + TD V N+ E + Sbjct: 1233 TEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQD-----ATEDTD--VQNMNEYLSS 1285 Query: 571 HKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD-GEPLDETSQMSDLPVKVIHVESGKILT 629 K AQ ++ K ++ + E + Q + PD E L H E + Sbjct: 1286 FKVAQYVVREEDKIEEIEREIIK-QEENVDPDYWEKLLRH-----------HYEQQQEDL 1333 Query: 630 GTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKK 689 + K ++ + N + + SE S EEE+E+ +E+P+ + + +K Sbjct: 1334 ARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKD 1393 Query: 690 IPDP 693 P P Sbjct: 1394 KPLP 1397 >gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sapiens] Length = 1912 Score = 386 bits (992), Expect = e-107 Identities = 243/672 (36%), Positives = 363/672 (54%), Gaps = 75/672 (11%) Query: 752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811 G L YQ++GL WL + + ILADEMGLGKT+QT + L + GPFL+ P Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783 Query: 812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ--------LRSGK----------- 852 LST+ NW EF+ WAP + V+Y G +R +R GK Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843 Query: 853 -FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911 F+VLLT+YE I D IL I W +IVDE HR+KN+ K +VLN Y +LLLTG Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNG-YSLQHKLLLTG 902 Query: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971 TPLQN L EL+ LLNFL P F + F + F D+ +E+ I ++LH + Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF----------ADIAKEDQI---KKLHDM 949 Query: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031 L P +LRRLK +V +P K E +++ ++S +Q+ Y++ +L + + +G G Sbjct: 950 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKY-----ILTRNFEALNARGGGN 1004 Query: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091 +L+N +M L+K CNHPY+F + E G+ G L RASGK LL ++L Sbjct: 1005 QVSLLNVVMDLKKCCNHPYLFP---VAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKN 1061 Query: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151 L+ H+VL+F QMT ++ ++ED+ + G+KY R+DG R + FN PG++ F Sbjct: 1062 LKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFC 1121 Query: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211 FLLSTRAGGLG+NL +ADTVII+DSDWNPH D+QA RAHRIGQ +V + R T SVE Sbjct: 1122 FLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVE 1181 Query: 1212 EKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF 1271 E+I AK K+ + V++ G+ + S ++ L IL+ ++ + +T G Sbjct: 1182 ERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQE--LDDILKFGTEELFKDEATDGG---- 1235 Query: 1272 AHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREE---A 1328 G N + E+ + DD+ + +++ R+++E + ++ A Sbjct: 1236 --------GDNKEGEDSSVIHY----DDKAIERLLDRNQDETEDTELQGMNEYLSSFKVA 1283 Query: 1329 RNPKRKPRLMEEDELPSWIIKDDAEVE--------RLTCEEEEEKM---FGRGSRHRKEV 1377 + R+ + EE+E+ IIK + V+ R E+++E + G+G R RK+V Sbjct: 1284 QYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQV 1343 Query: 1378 DYSD-SLTEKQW 1388 +Y+D S ++ W Sbjct: 1344 NYNDGSQEDRDW 1355 Score = 33.9 bits (76), Expect = 1.4 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 5/127 (3%) Query: 650 EVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIEN 709 EVA RSDSE S ++++++ P+ + +E+++ D D D + ++E+ Sbjct: 98 EVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEPKSSAQLLED 157 Query: 710 -AKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSL 768 +D+D + S+ R L +Y A + V + ++ + V K + G +W Sbjct: 158 WGMEDIDHVF--SEEDYRTLTNYKAFSQFVRPLIAAKNPKI--AVSKMMMVLGAKWREFS 213 Query: 769 YNNNLNG 775 NN G Sbjct: 214 TNNPFKG 220 >gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sapiens] Length = 1710 Score = 384 bits (987), Expect = e-106 Identities = 255/668 (38%), Positives = 353/668 (52%), Gaps = 74/668 (11%) Query: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813 L+ YQ+ GL WL + + ILADEMGLGKTIQTI+ + YL ++ GPFL++VPLS Sbjct: 481 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 540 Query: 814 TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVP------QLRSGKFNVLLTTYEYIIKDK 867 TL++W E WA + V Y G +R Q + KFN+LLTTYE ++KDK Sbjct: 541 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK 600 Query: 868 HILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNF 927 L + W ++ VDE HR+KN L + L + + RLL+TGTPLQN L ELW+LL+F Sbjct: 601 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTL-IDFKSNHRLLITGTPLQNSLKELWSLLHF 659 Query: 928 LLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQ 987 ++P F S FE+ G + LHK L PFLLRR+KK+VE Sbjct: 660 IMPEKFSSWEDFEEEHGK-----GREYGYAS---------LHKELEPFLLRRVKKDVEKS 705 Query: 988 LPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICN 1047 LP KVE +++ +MSALQ+ Y K +L + K KG T +N +M+L+K CN Sbjct: 706 LPAKVEQILRMEMSALQKQYY-----KWILTRNYKALSKGSKGSTSGFLNIMMELKKCCN 760 Query: 1048 HPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTS 1107 H Y+ + + + F L R+SGK LLD++L +LR ++VL+F QM Sbjct: 761 HCYLIKPPDNN-----EFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVR 815 Query: 1108 LMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS 1167 ++ I+ +Y YR F + RLDG+ K E R L FN GSE F FLLSTRAGGLG+NL S Sbjct: 816 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 875 Query: 1168 ADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQK 1227 ADTV+IFDSDWNP DLQAQ RAHRIGQ+ +V + RL T SVEE IL AK K+ +D Sbjct: 876 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 935 Query: 1228 VIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEE 1287 VIQ K+ H A + ++E+ +A G +E Sbjct: 936 VIQRMDTTGKTVLHTGSAPSSSTPFNKEE----------------LSAILKFGAEELFKE 979 Query: 1288 PPLKEEDEVPDDETVNQMIAR---HEEE-------------FDL--FMRMDLDR-RREEA 1328 P + E++ P + +++++ R HE E F + F MD D E Sbjct: 980 P--EGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPE 1037 Query: 1329 RNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQW 1388 RN K ++ ED+ + E E E EE M R K++ ++ S + Sbjct: 1038 RNSKNWEEIIPEDQ------RRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSR 1091 Query: 1389 LKKITGKD 1396 ++ +G D Sbjct: 1092 SRRYSGSD 1099 Score = 37.4 bits (85), Expect = 0.12 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 67/245 (27%) Query: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA 1500 SS+ DSD+GS + ++S + D S++ K + +PP VD Sbjct: 44 SSQSGSSDSDSGSES---GSQSESESDTSRENKVQAKPPK-----------------VDG 83 Query: 1501 VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD 1560 +K S S +++ KK +++ + ++++ ++ + Sbjct: 84 AEFWKSSPS--------------------ILAVQRSAILKKQQQQQQQQQHQASSNSGSE 123 Query: 1561 VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD----------SEGEESEEE 1610 E S EDS + V++K K++D G +SE E Sbjct: 124 -------------EDSSSSEDS---DDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESE 167 Query: 1611 EEGEEEGSESESRSVKVKIKL-GRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEE 1669 EE E+ + + K K+ RK + + + K G++ + R +DD EE+ + Sbjct: 168 EEREKSSCDETESDYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEDDDEEDYDN 227 Query: 1670 DRSGS 1674 D+ S Sbjct: 228 DKRSS 232 Score = 33.1 bits (74), Expect = 2.3 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 13/86 (15%) Query: 1593 RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS 1652 +Q+ +++ + EE+ E S+ S VK K K K +D G PS+ Sbjct: 107 QQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVKRK-----KHKDEDWQMSGSGSPSQ-- 159 Query: 1653 RAKPVVSDDDSEEEQEEDRSGSGSEE 1678 S DSE E+E ++S E Sbjct: 160 ------SGSDSESEEEREKSSCDETE 179 Score = 31.6 bits (70), Expect = 6.8 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Query: 1599 EDDSEGEESEEEEEGEEEGSESESRS-VKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPV 1657 + S S + + G E GS+SES S + K+ K D + + PS + + Sbjct: 41 DGSSSQSGSSDSDSGSESGSQSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSA 100 Query: 1658 VSDDDSEEEQEEDR---SGSGSEED 1679 + +++Q++ S SGSEED Sbjct: 101 ILKKQQQQQQQQQHQASSNSGSEED 125 >gi|21914927 helicase, lymphoid-specific [Homo sapiens] Length = 838 Score = 382 bits (982), Expect = e-105 Identities = 267/801 (33%), Positives = 405/801 (50%), Gaps = 129/801 (16%) Query: 497 IQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQ 556 +++L AV T A E E++ E +E+ER +++ + + + + + +RL +LL++ Sbjct: 18 VEQLDTAVIT-PAMLEEEEQLEAAGLERER--KMLEKARMSWDRESTEIRYRRLQHLLEK 74 Query: 557 TDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLP 616 ++ Y L + Q Q+ ++KKK+K ++K E+ Sbjct: 75 SNIYSKFLLTKMEQQ---QLEEQKKKEKLERKKES------------------------- 106 Query: 617 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQA 676 + V+ GK K + + Y ++ EE S ++ ++E E + Sbjct: 107 ---LKVKKGKNSIDASEEKPVMRKKRGREDESYNISEVMSKEEILSVAKKNKKENEDENS 163 Query: 677 AQPPTLPVEEKKKIPDPDS---DDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYA 733 + L VE+ +K D +S D +SE + +N K D Sbjct: 164 SST-NLCVEDLQKNKDSNSIIKDRLSET----VRQNTKFFFDP----------------- 201 Query: 734 VAHAVTERVD-KQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL 792 V + V +Q GV++ YQ++G+EWL L+ N +NGILADEMGLGKT+Q IA Sbjct: 202 VRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIAT 261 Query: 793 ITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQL--RS 850 I LM + + GPFL+ PLSTL NW EF ++ P + + Y G+ R+ V + R Sbjct: 262 IA-LMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRK 320 Query: 851 GKFN---VLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL 907 G V++T++E ++D++ L WKY+IVDEGHR+KN C+L + L + A +L Sbjct: 321 GTLQIHPVVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELK-RFNADNKL 379 Query: 908 LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFN-APFAMTGEKVDLNEEETILIIR 966 LLTGTPLQN L ELW+LLNFLLP +F +FE WF+ + T E + E E ++ Sbjct: 380 LLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQ-NVLH 438 Query: 967 RLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDK 1026 LH++L PFLLRRLK +V ++P K E V+ +S Q + Y + + + GS + + Sbjct: 439 MLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKE 498 Query: 1027 --------KGKGGTKTLMN----------------------------------------- 1037 + K T+ +N Sbjct: 499 TIELSPTGRPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNL 558 Query: 1038 ----TIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLR 1093 +M LRK CNHPY+ ++ + ++ +V SGKF +LDR+LP+L+ Sbjct: 559 KLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELK 612 Query: 1094 ATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFL 1153 HKVLLF QMTS++ I+ DY R F + RLDG+ +R + +FN E FIFL Sbjct: 613 KRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFN-TDPEVFIFL 671 Query: 1154 LSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEK 1213 +STRAGGLG+NL +ADTVII+DSDWNP DLQAQDR HRIGQ V V RL T N++++K Sbjct: 672 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731 Query: 1214 ILAAAKYKLNVDQKVIQAGMF 1234 I+ A K +++ +I F Sbjct: 732 IVERAAAKRKLEKLIIHKNHF 752 >gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sapiens] Length = 2997 Score = 367 bits (943), Expect = e-101 Identities = 214/498 (42%), Positives = 300/498 (60%), Gaps = 38/498 (7%) Query: 751 NGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIV 810 N L++YQ++G+ WL+ + N N ILADEMGLGKTIQ+I + Y + K I+GPFL+I Sbjct: 965 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1023 Query: 811 PLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV--------PQLR----SGKFNVLLT 858 PLST+ NW EF W V V Y GS A+RR PQ R S KF+ ++T Sbjct: 1024 PLSTIPNWEREFRTWTELNVVV-YHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1082 Query: 859 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 918 T+E I+ D L I W+ +++DE HR+KN +CKL + L + ++LLTGTPLQN + Sbjct: 1083 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLE-HKVLLTGTPLQNTV 1141 Query: 919 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR 978 EL++LL+FL P+ F S +TF Q F DL EE + ++L +L+P +LR Sbjct: 1142 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1188 Query: 979 RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMN 1037 RLK++VE L K E +I+ +++ +Q+ YR + K L+ G G+ L+N Sbjct: 1189 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG-----GQANVPNLLN 1243 Query: 1038 TIMQLRKICNHPYMFQHIEESFSEHLGFTGGI----VQGLDLYRASGKFELLDRILPKLR 1093 T+M+LRK CNHPY+ EE E T Q + +A+GK L+D++LPKL+ Sbjct: 1244 TMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLK 1303 Query: 1094 ATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFL 1153 A H+VL+F QM + I+EDY R + Y R+DG + R + F++P S+ F+FL Sbjct: 1304 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1363 Query: 1154 LSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEK 1213 L TRAGGLG+NL +ADT IIFDSDWNP DLQAQ R HRIGQ V++ RL T NS E + Sbjct: 1364 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1423 Query: 1214 ILAAAKYKLNVDQKVIQA 1231 + A KL +D+ V+Q+ Sbjct: 1424 MFDKASLKLGLDKAVLQS 1441 Score = 53.9 bits (128), Expect = 1e-06 Identities = 82/336 (24%), Positives = 116/336 (34%), Gaps = 53/336 (15%) Query: 48 GPPSAGHPIPTQGPGGYP--QDNMHQMHK-PMESMHEKGMSDDPRYNQMKGMGMRSGGHA 104 GP H +P Q P P + ++ Q H P ++H + ++ PR++ Sbjct: 231 GPGHLSH-VPQQSPSMAPSLRHSVQQFHHHPSTALHGESVAHSPRFSPNPPQ------QG 283 Query: 105 GMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ 164 + P SQ PSP + S P S + G ++G Q LG Sbjct: 284 AVRPQTLNFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMN---------QNLGL 334 Query: 165 QNRGPTPFNQNQLHQLRA---QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLP 221 N TP NQ+ A + + L QP+ + + M Q Q Sbjct: 335 TNN--TPMNQSVPRYPNAVGFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYAS 392 Query: 222 PPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPGG 279 PP +S P P P P G PNMP P PS PPG G Q G Sbjct: 393 PPPMSPMKAMSNPAGTPPPQVRPGSAGIPMEVG-SYPNMPHPQPSHQPPGAMGIGQRNMG 451 Query: 280 P-----PKPW---------------PEG-PMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318 P +P+ P G P P + ++LIP Q P+ + Sbjct: 452 PRNMQQSRPFIGMSSAPRELTGHMRPNGCPGVGLGDPQAIQERLIPGQQHPGQQPSFQQL 511 Query: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITP 354 P PP PG Q +P P HQ +++ P Sbjct: 512 PTC-----PPLQPHPGLHHQSSPPHPHHQPWAQLHP 542 Score = 52.4 bits (124), Expect = 4e-06 Identities = 90/380 (23%), Positives = 120/380 (31%), Gaps = 79/380 (20%) Query: 20 PGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQD---NMHQMHKPM 76 P P P P P PS GPP+ GHP Q G Y +M Q +P Sbjct: 165 PQPQP-----PQPAPS------------GPPAQGHPQHMQQMGSYMARGDFSMQQHGQPQ 207 Query: 77 ESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPA 136 + M + + + GH P SP S + S H S+ + Sbjct: 208 QRMSQFSQGQEGLNQGNPFIATSGPGHLSHVPQQSPSMAPSLRH-SVQQFHHHPSTALHG 266 Query: 137 SGPSSGPQMSSGPGGAPLDGA-DPQALGQQNRG---PTPFNQNQLHQLRAQIMAYKMLAR 192 + P+ S P P GA PQ L +R P+P N Q Y Sbjct: 267 ESVAHSPRFSPNP---PQQGAVRPQTLNFSSRSQTVPSPTINNS-----GQYSRYPYSNL 318 Query: 193 GQPLPDHLQMAVQ-GKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSR 251 Q L ++ M G M Q +P P +A G + Sbjct: 319 NQGLVNNTGMNQNLGLTNNTPMNQSVPRYP----NAVG-------------------FPS 355 Query: 252 PHGMGGPNMPPPGPSGVPPGM------PGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305 G G + P PSG M P QP G P P PM + P TP + P Sbjct: 356 NSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRP 415 Query: 306 QPTG----------RPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPI 355 G P P P PP A + + P Q P + + +T Sbjct: 416 GSAGIPMEVGSYPNMPHPQPSHQPPGAMGI-GQRNMGPRNMQQSRPFIGMSSAPRELTGH 474 Query: 356 QKPR-----GLDPVEILQER 370 +P GL + +QER Sbjct: 475 MRPNGCPGVGLGDPQAIQER 494 Score = 41.2 bits (95), Expect = 0.009 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 11/111 (9%) Query: 543 DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD 602 D K+K L L+ Y ++ V ++ + +K K+K+ + N Sbjct: 2584 DAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPN--------- 2634 Query: 603 GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAP 653 LD + + V V++ +GK + G AP L WLE NP + VAP Sbjct: 2635 --KLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAP 2683 Score = 38.5 bits (88), Expect = 0.055 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Query: 561 VANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVI 620 V L L HK ++ E + K + + T I G+ LD D + VI Sbjct: 2519 VEGLDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQ-LDP-----DTRIPVI 2572 Query: 621 HVESGKILTGTDAPKAGQLEAWLEMNPGYEV 651 ++E G L G DAPK L WL+++P Y V Sbjct: 2573 NLEDGTRLVGEDAPKNKDLVEWLKLHPTYTV 2603 Score = 36.2 bits (82), Expect = 0.28 Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 36/239 (15%) Query: 1466 DDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKE 1525 DDE P E+ + + ++KI + V+ + QL E + Sbjct: 2033 DDEPPDLSSIIEPITEERASRTLYRIELLRKIREQVLHHP------QLGERLKLCQPSLD 2086 Query: 1526 LPEYYELIRKPVDFK--KIKERIRNHKYRSLNDLEKDVMLLCQN---------------- 1567 LPE++E R D K + Y LND E + +N Sbjct: 2087 LPEWWECGRHDRDLLVGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGNTSSLNPL 2146 Query: 1568 ----AQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK--EDDSEGEESEEEEE--GEEEGSE 1619 QT + S +D VL+ V + ++ EG+E EEE + G+E E Sbjct: 2147 AVGFVQTPPVISSAHIQDERVLEQAEGKVEEPENPAAKEKCEGKEEEEETDGSGKESKQE 2206 Query: 1620 SESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSR--AKPVVSDDDSEEEQEEDRSGSGS 1676 E+ + VK +L E D G + +GS + + DDD EE + +G+ S Sbjct: 2207 CEAEASSVKNELKGVEVGAD--TGSKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVS 2263 Score = 33.5 bits (75), Expect = 1.8 Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 30/191 (15%) Query: 1336 RLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKKITGK 1395 R++E+ E ++ A E+ +EEEE+ G G ++E + S + + G Sbjct: 2166 RVLEQAEGKVEEPENPAAKEKCEGKEEEEETDGSGKESKQECEAEASSVKNELKGVEVGA 2225 Query: 1396 DIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKKS--------SRKRKR 1447 D + S K EE E++E++ + ++S SR + Sbjct: 2226 DTGSKSIS-----------------EKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNF 2268 Query: 1448 DSDAGSSTPTTSTRSRD-----KDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVI 1502 D ++ +S T +RD D S Q R A P + ++ I +AV+ Sbjct: 2269 DEESNASMSTARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVL 2328 Query: 1503 KYKDSSSGRQL 1513 K K + RQ+ Sbjct: 2329 KGKWPVNRRQM 2339 Score = 33.1 bits (74), Expect = 2.3 Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 29/138 (21%) Query: 1375 KEVDYSDSLTEKQWLKKITGKDIHDTASSVARGL---QFQRGLQFCTRASKAIEEGTLEE 1431 K DY S+ ++ KK K+ H A ++G F G+ ++ + +L+ Sbjct: 582 KSDDYLPSIEQQPQQKKKKKKNNHIVAEDPSKGFGKDDFPGGVD-----NQELNRNSLDG 636 Query: 1432 IEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLT 1491 +EE ++KK S K K KD + K+ K + P E +P P + Sbjct: 637 SQEEKKKKKRS-KAK------------------KDPKEPKEPKEKKEPKEPKTPKAPKIP 677 Query: 1492 K--KMKKIVDAVIKYKDS 1507 K K KK A K K S Sbjct: 678 KEPKEKKAKTATPKPKSS 695 Score = 31.2 bits (69), Expect = 8.9 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 31/141 (21%) Query: 554 LQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS 613 L ++D+Y+ ++ + +Q KKKKKK AE + G D Sbjct: 580 LVKSDDYLPSIEQQPQQ----------KKKKKKNNHIVAEDPSKGFGKD----------- 618 Query: 614 DLPVKVIHVESGK-ILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEE 672 D P V + E + L G+ K + + + +P E +E++E +E + Sbjct: 619 DFPGGVDNQELNRNSLDGSQEEKKKKKRSKAKKDP---------KEPKEPKEKKEPKEPK 669 Query: 673 QPQAAQPPTLPVEEKKKIPDP 693 P+A + P P E+K K P Sbjct: 670 TPKAPKIPKEPKEKKAKTATP 690 >gi|114326455 chromodomain helicase DNA binding protein 8 [Homo sapiens] Length = 2302 Score = 362 bits (928), Expect = 2e-99 Identities = 313/1039 (30%), Positives = 474/1039 (45%), Gaps = 141/1039 (13%) Query: 301 KLIPPQPTGRPSPA-PPAVPPAA-SPVMPPQTQSPGQ-PAQ--PAPMVPLHQKQSRITPI 355 +++P P+ +P P PP+ P S V Q PGQ P Q P+ + Q Q+ + Sbjct: 73 QIVPQPPSSQPQPQQPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPVKVVLQPQAGSSQ- 131 Query: 356 QKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQ 415 GL V++L E + P S A K +E + Q Sbjct: 132 GASSGLSVVKVLSASEVAALSS-----------PASSAPHSGGKTGMEENR----RLEHQ 176 Query: 416 LRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQ-E 474 +QE + + A+A R ++ R E + + E E+KRR+K E Sbjct: 177 KKQE------KANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEEEGEKKRRKKSAGE 230 Query: 475 YLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAED 534 L + K K S T KL +R +N +E + ++ Sbjct: 231 RLKE--EKPKKSKTSGASKTKGKSKLNTITPVVGKKRKRNTSSDNSDVEVMPAQSPREDE 288 Query: 535 EEGYRKLIDQKKDKRLAYL----LQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAE 590 E +K ++ KR Y ++ TD+ ++ K + E Sbjct: 289 ESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEEVDVTGPIKPEPILPE----------- 337 Query: 591 NAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPK---AGQLEAWLEMNP 647 P PDGE L + P + K+L+ K +GQ E Sbjct: 338 ------PVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSGQYTEAEEFFV 391 Query: 648 GYEVAPRSDSEESGSEEEEEEEEEEQP------QAAQPPTLPVEEKKKIPDPDSDDVSEV 701 Y+ E + + E+++ Q + AQ E+++ +PD +V + Sbjct: 392 KYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPF-NPDYVEVDRI 450 Query: 702 -DARHIIEN------------------------AKQDVDD----EYGVSQALARGLQSYY 732 D H I+ K+DVD+ E+ Q+ L+ Sbjct: 451 LDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVN 510 Query: 733 AVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL 792 + ++++ L++YQ++G+ WL+ + N N ILADEMGLGKTIQ+IA Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAF 570 Query: 793 ITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVP------ 846 + + + I+GPFL+I PLST++NW EF+ W + + Y GS A+R+ Sbjct: 571 LQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCK 628 Query: 847 ----QLRSG--KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH 900 +L G KF+ L+TT+E I+ D L +I W+ +I+DE HR+KN +CKL L H Sbjct: 629 DSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLK-H 687 Query: 901 YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE 960 ++LLTGTPLQN + EL++LL+FL P+ F S S F + F DL EE Sbjct: 688 MDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEE 737 Query: 961 TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD 1020 + ++L +L+P +LRRLK++VE L K E +I+ +++ +Q+ YR + K Sbjct: 738 QV---QKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS 794 Query: 1021 GSEKDKKGKGGTK--TLMNTIMQLRKICNHPYMFQHIEES----FSEHLGFTGGIVQGLD 1074 KG G T L+NT+M+LRK CNHPY+ EE F E Sbjct: 795 ------KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQA 848 Query: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134 + R++GK L+D++LPKL+A HKVL+F QM + I+EDY R + Y R+DG + Sbjct: 849 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNL 908 Query: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194 R + F++P S+ F+FLL TRAGGLG+NL +ADT IIFDSDWNP DLQAQ R HRIG Sbjct: 909 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 968 Query: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA-----------GMFDQKSSSHER 1243 Q V+V RL T NS E ++ A KL +D+ V+Q+ F +K Sbjct: 969 QSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLL 1028 Query: 1244 RAFLQAILEHEEQDESRHC 1262 R A + E+ + S+ C Sbjct: 1029 RKGAYAAIMEEDDEGSKFC 1047 Score = 38.5 bits (88), Expect = 0.055 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 12/77 (15%) Query: 581 KKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS---DLPVKVIHVESGKILTGTDAPKAG 637 KKK +KK E E ++E + + + + VI+ G +L G DAP+ Sbjct: 2006 KKKGNRKKLVELEV---------ECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRA 2056 Query: 638 QLEAWLEMNPGYEVAPR 654 +LE WL+ +P + V PR Sbjct: 2057 ELEMWLQGHPEFAVDPR 2073 Score = 32.0 bits (71), Expect = 5.2 Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 38/248 (15%) Query: 1325 REEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLT 1384 R AR + PR++ EDELPS + EEE EK + S + + + Sbjct: 192 RARARGEQNIPRVLNEDELPS-----------VRPEEEGEKKRRKKSAGERLKEEKPKKS 240 Query: 1385 EKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKKSSRK 1444 + K GK +T + V + + + + E+ E +++++S+R+ Sbjct: 241 KTSGASKTKGKSKLNTITPVVGKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQ 300 Query: 1445 RKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNP----------------P 1488 KR T + D D+E ++ G E + P P Sbjct: 301 VKRK----KYTEDLDIKITD-DEEEEEVDVTGPIKPEPILPEPVQEPDGETLPSMQFFVE 355 Query: 1489 NLTKKMKKIVDAVIKY----KDSSSGR--QLSEVFIQLPSRKELPEYYELIRKPVDFKKI 1542 N +++ IVD V+ K+ SG+ + E F++ + L + I + K+I Sbjct: 356 NPSEEDAAIVDKVLSMRIVKKELPSGQYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRI 415 Query: 1543 KERIRNHK 1550 ++++ K Sbjct: 416 HQKLKRFK 423 >gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sapiens] Length = 2715 Score = 360 bits (924), Expect = 6e-99 Identities = 361/1265 (28%), Positives = 556/1265 (43%), Gaps = 227/1265 (17%) Query: 453 TEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHR-----SVTGKIQKLTKAVATY 507 TE + Q++ + +R+K+ E L DFK +V G + + +T Sbjct: 228 TESTDSQKRRSGRQVKRRKYNEDL--------DFKVVDDDGETIAVLGAGRTSALSASTL 279 Query: 508 HANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYV----AN 563 E + + IEK + + E G + D L Y+ + Y+ A Sbjct: 280 AWQAEEPPEDDANIIEKILASKTVQEVHPG-----EPPFDLELFYVKYRNFSYLHCKWAT 334 Query: 564 LTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVE 623 + EL + + AQ K + K+ + K E PD +D ++V H + Sbjct: 335 MEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRI-------LEVAHTK 387 Query: 624 SGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLP 683 + TG + L W + EES E EE+ + + + LP Sbjct: 388 DAE--TGEEVTH--YLVKWCSL----------PYEESTWELEEDVDPAKVKEFESLQVLP 433 Query: 684 VEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVD 743 E K + P SD +++ +N+ Q Sbjct: 434 --EIKHVERPASDSWQKLEKSREYKNSNQ------------------------------- 460 Query: 744 KQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRIN 803 L++YQ++G+ WL+ + N N ILADEMGLGKTIQ+I ++ + + I+ Sbjct: 461 ----------LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFL-RGIH 509 Query: 804 GPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV------------PQLRSG 851 GPFLII PLST++NW EF W + + Y GS +R+ P Sbjct: 510 GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVF 568 Query: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911 KF+V++TT+E I+ D L KI W +I+DE HR+KN +CKL + L ++LLTG Sbjct: 569 KFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKL-MALEHKVLLTG 627 Query: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971 TPLQN + EL++LLNFL P+ F S + F + F DL EE + ++L + Sbjct: 628 TPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 674 Query: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGV-LLTDGSEKDKKGKG 1030 L+P +LRRLK +VE L K E +I+ +++ +Q+ YR + K LT G+ + Sbjct: 675 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNM--- 731 Query: 1031 GTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGI----VQGLDLYRASGKFELLD 1086 L+NT+M+LRK CNHPY+ EE E T Q + +A+GK L+D Sbjct: 732 --PNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLID 789 Query: 1087 RILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPG 1146 ++LPKL A HKVL+F QM + I+EDY R + Y R+DG + R + F +P Sbjct: 790 KLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPD 849 Query: 1147 SEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCT 1206 S+ F+FLL TRAGGLG+NL +ADT IIFDSDWNP DLQAQ R HRIGQ V+V RL T Sbjct: 850 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 909 Query: 1207 VNSVEEKILAAAKYKLNVDQKVIQ------AGMFDQKSSSHERRAFLQ----AILEHEEQ 1256 NS E ++ A KL +D+ V+Q Q+ S E L+ L EE Sbjct: 910 RNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEED 969 Query: 1257 DESRHC------------------STGSGSASFAHTAPPPAGVNPD--LEEPPLKEE-DE 1295 + S+ C S G GS +FA + +G D L++P ++ + Sbjct: 970 EGSKFCEEDIDQILQRRTHTITIQSEGKGS-TFAKASFVASGNRTDISLDDPNFWQKWAK 1028 Query: 1296 VPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVE 1355 + + +T A++E+E + +DR R R + EEDEL + D E Sbjct: 1029 IAELDTE----AKNEKE-----SLVIDRPR--VRKQTKHYNSFEEDELMEFSELDSDSDE 1077 Query: 1356 RLTCE---EEEEKMFGRGSRHRKEVD--------YSDSLTEKQWLKKITGKDIHDTASSV 1404 R T ++ + + R R E + + D LT ++ + KD+ + Sbjct: 1078 RPTRSRRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDM----EMI 1133 Query: 1405 ARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRD 1464 R L L +C + K +E I E + K + + + +G S P R Sbjct: 1134 CRAL-----LVYCVKHYKG-DEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGR--- 1184 Query: 1465 KDDESKKQKKRGRPP----AEKLSPNPPNLT-------KKMKKIVDAVI-------KYKD 1506 + KK K + P A+ L+ P + K +K+ + V+ K Sbjct: 1185 ---KGKKTKNQLLIPELKDADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKA 1241 Query: 1507 SSSGRQLSEVFIQLPSRK---ELPEYYELIRKPVDF------KKIKERIRNHKYRSLNDL 1557 G + F P+R+ LP+ + + PVD+ K + + H Y N + Sbjct: 1242 EILGEAAEKAFEGSPARELDVPLPD-IDYMEIPVDWWDAEADKSLLIGVFKHGYERYNAM 1300 Query: 1558 EKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEG 1617 D L E SL E + + R +KED+ +E++ +G ++ Sbjct: 1301 RADPALCFLEKVGMPDEKSLSAEQGVTDGTSDIPERGNTDKEDN-----AEDKVDGLQKQ 1355 Query: 1618 SESES 1622 +ES S Sbjct: 1356 TESSS 1360 >gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sapiens] Length = 2881 Score = 354 bits (908), Expect = 5e-97 Identities = 226/585 (38%), Positives = 327/585 (55%), Gaps = 55/585 (9%) Query: 711 KQDVD----DEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLV 766 K+DVD +E+ QA + + +++D+ L++YQ++GL WL+ Sbjct: 813 KEDVDLAKIEEFEQLQASRPDTRRLDRPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLL 872 Query: 767 SLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWA 826 + N N ILADEMGLGKTIQ+I + Y + I GPFLII PLST++NW EF W Sbjct: 873 FNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGIRGPFLIIAPLSTIANWEREFRTWT 931 Query: 827 PSVVKVSYKGSPAARRAFVPQ-----------LRSG-KFNVLLTTYEYIIKDKHILAKIR 874 V V Y GS +R+ +R +F ++TT+E I+ L I Sbjct: 932 DINVVV-YHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIE 990 Query: 875 WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFK 934 W+ +I+DE HR+KN +CKL + L + ++LLTGTPLQN + EL++LL+FL P F Sbjct: 991 WRCVIIDEAHRLKNKNCKLLEGLKLMNLE-HKVLLTGTPLQNTVEELFSLLHFLEPLRFP 1049 Query: 935 SCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEY 994 S STF Q F DL EE + ++L +L+P +LRRLK++VE +L K E Sbjct: 1050 SESTFMQEFG----------DLKTEEQV---QKLQAILKPMMLRRLKEDVEKKLAPKEET 1096 Query: 995 VIKCDMSALQRVLYRHMQAKGV-LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053 +I+ +++ +Q+ YR + K L+ G+ G+ L+NT+M+LRK CNHPY+ + Sbjct: 1097 IIEVELTNIQKKYYRAILEKNFSFLSKGA-----GQTNVPNLVNTMMELRKCCNHPYLIK 1151 Query: 1054 HIEES----FSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1109 EE F + + +++GK L+D++LPK++A HKVL+F QM + Sbjct: 1152 GAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCL 1211 Query: 1110 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1169 I+EDY ++ + Y R+DG + R + F++P S+ F+FLL TRAGGLG+NL +AD Sbjct: 1212 DILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAAD 1271 Query: 1170 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229 T IIFDSDWNP DLQAQ R HRIGQ V+V RL T NS E ++ A KL +D+ V+ Sbjct: 1272 TCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVL 1331 Query: 1230 QA--------GMFDQKSSSH----ERRAFLQAILEHEEQDESRHC 1262 Q+ G Q S RR AI+E EE + S+ C Sbjct: 1332 QSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIME-EEDEGSKFC 1375 Score = 43.9 bits (102), Expect = 0.001 Identities = 53/207 (25%), Positives = 83/207 (40%), Gaps = 32/207 (15%) Query: 594 GQTPAIG---PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY- 649 G PA+ P G P E+ PV VI+++ G L G DAPK LE WL+ +PGY Sbjct: 2451 GINPALSYTQPQGIPDTES------PVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYV 2504 Query: 650 ----EVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEK---------KKIPDPDSD 696 PR E +++ P +L EE+ +K+ + Sbjct: 2505 EDLGAFIPRMQLHE--GRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAP 2562 Query: 697 DVSEVDARHIIENAKQDVDDEYG--VSQA--LARGLQSYYAVAHAVTERVDKQSALMVNG 752 + ++ R + EN++ V E+G V Q+ L + V E V ++ +G Sbjct: 2563 PLKDL-CRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSG 2621 Query: 753 VLKQYQIKGLEWLVSLYNNNL--NGIL 777 + K S+ N L NG+L Sbjct: 2622 IAKATAAAAAASATSVSGNPLLANGLL 2648 >gi|148612870 chromodomain helicase DNA binding protein 1-like [Homo sapiens] Length = 897 Score = 350 bits (897), Expect = 9e-96 Identities = 206/482 (42%), Positives = 280/482 (58%), Gaps = 29/482 (6%) Query: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813 L+ YQ++G+ WL ++ IL DEMGLGKT QTIAL YL GPFLI+ PLS Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105 Query: 814 TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS-GKFNVLLTTYEYIIKDKHILAK 872 LSNW E ++AP + V+Y G R L+ +F+VLLTTYE +KD L Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKS 165 Query: 873 IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTI 932 W ++VDE HR+KN L + L+ V LLLTGTP+QN L EL++LL+F+ P + Sbjct: 166 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVV-FSLLLTGTPIQNSLQELYSLLSFVEPDL 224 Query: 933 FKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKV 992 F + F + ++ E LHK+L+PFLLRR+K EV +LP+K Sbjct: 225 FSKEEVGD------FIQRYQDIEKESESA----SELHKLLQPFLLRRVKAEVATELPKKT 274 Query: 993 EYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMF 1052 E VI MSALQ+ Y+ + K + + +E KK K L N + QLRK +HPY+F Sbjct: 275 EVVIYHGMSALQKKYYKAILMKDLDAFE-NETAKKVK-----LQNILSQLRKCVDHPYLF 328 Query: 1053 QHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112 +E E G L ASGK LLD++L L + H+VLLF QMT ++ I+ Sbjct: 329 DGVEPEPFE---------VGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDIL 379 Query: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172 +DY YRG+ Y R+DG+ + E+R + +K F + F+FLLSTRAGG+G+NL +ADTVI Sbjct: 380 QDYMDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPIFVFLLSTRAGGVGMNLTAADTVI 437 Query: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG 1232 DSD+NP DLQA RAHRIGQ V+V+RL ++VEE + A KL + +I+ G Sbjct: 438 FVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGG 497 Query: 1233 MF 1234 F Sbjct: 498 HF 499 >gi|190358534 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform b [Homo sapiens] Length = 1026 Score = 306 bits (784), Expect = 1e-82 Identities = 274/941 (29%), Positives = 426/941 (45%), Gaps = 118/941 (12%) Query: 362 DPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVV 421 +P E + + AR I ELE+L S DL+ LK L L + + Sbjct: 125 EPSEDEESQGLPTMARRNDDISELEDL--SELEDLKDAKLQTLKELFPQRSDNDLLKLIE 182 Query: 422 VCMRRDTALETAL-----NAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYL 476 D A+ AL ++ K S E ++ Q I +K R H E Sbjct: 183 STSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI---KKTRLDHGEES 239 Query: 477 NSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEE 536 N + + ++++ V KL K + RE KE+E + E + L E+ Sbjct: 240 NESAESSSNWEKQESIVL----KLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAED 295 Query: 537 GYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAEN----A 592 + + Q + + ++ Y N T+ + K + A+ KK+KK N Sbjct: 296 QDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVV 355 Query: 593 EGQTPAIGPD-GEPLDETSQMSDLPV------KVIH-VESGKILTGTDAPKAGQLEAW-- 642 E G D G LDE + + K++H ++ I T P+ Q +A Sbjct: 356 EDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKI 415 Query: 643 LEMNP--GYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700 E+ P +E S+ +G E+ + K + + E Sbjct: 416 TELRPFNSWEALFTKMSKTNGLSEDL-----------------IWHCKTL-------IQE 451 Query: 701 VDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760 D + N +D+ ++ + G + +++ S L + LK YQ Sbjct: 452 RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGW--------NIEQPSILNQSLSLKPYQKV 503 Query: 761 GLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAY 820 GL WL ++ + LNGILADEMGLGKTIQ IA + YL + NGP LI+VP ST+ NW Sbjct: 504 GLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-NGPHLIVVPASTIDNWLR 562 Query: 821 EFDKWAPSVVKVSYKGSPAARR--AFVPQLRSGKFNVLLTTYEYIIK---DKHILAKIRW 875 E + W P++ + Y GS R+ F R +NV++TTY I D+ + +++ Sbjct: 563 EVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKL 622 Query: 876 KYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKS 935 Y I DEGH +KN Q L T A RLLLTGTP+QN L EL +LLNF++P +F S Sbjct: 623 NYAIFDEGHMLKNMGSIRYQHLMT-INANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSS 681 Query: 936 CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYV 995 ++ + + + ++ + E+E I ++++PF+LRR+K+EV QLP K + + Sbjct: 682 STSEIRRMFSSKTKSADEQSIYEKER---IAHAKQIIKPFILRRVKEEVLKQLPPKKDRI 738 Query: 996 IKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYM---- 1051 C MS Q LY + + + EK+ + + N +MQLRK+ NHP + Sbjct: 739 ELCAMSEKQEQLYLGLFNRLKKSINNLEKNTE-------MCNVMMQLRKMANHPLLHRQY 791 Query: 1052 ---------------------------FQHIE--ESFSEHL-----GFTGGIVQGLDLYR 1077 F+ +E F H+ +DL Sbjct: 792 YTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDLIL 851 Query: 1078 ASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGM 1137 SGKF +L IL +L+ +V+LF Q T ++ I+E + +YLRLDG T+ +R Sbjct: 852 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 911 Query: 1138 LLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQN 1197 L+ FN + F+FLLST+AGGLG+NL SA+ VI+ D D NP+ D QA+DR HR+GQ Sbjct: 912 LIDEFN-TDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTK 970 Query: 1198 EVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKS 1238 EV V++L + ++EE +L + KL ++Q + D+ S Sbjct: 971 EVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGS 1011 >gi|190358536 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform a [Homo sapiens] Length = 1028 Score = 305 bits (780), Expect = 3e-82 Identities = 275/943 (29%), Positives = 428/943 (45%), Gaps = 120/943 (12%) Query: 362 DPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVV 421 +P E + + AR I ELE+L S DL+ LK L L + + Sbjct: 125 EPSEDEESQGLPTMARRNDDISELEDL--SELEDLKDAKLQTLKELFPQRSDNDLLKLIE 182 Query: 422 VCMRRDTALETAL-----NAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYL 476 D A+ AL ++ K S E ++ Q I +K R H E Sbjct: 183 STSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI---KKTRLDHGEES 239 Query: 477 NSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEE 536 N + + ++++ V KL K + RE KE+E + E + L E+ Sbjct: 240 NESAESSSNWEKQESIVL----KLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAED 295 Query: 537 GYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAEN----A 592 + + Q + + ++ Y N T+ + K + A+ KK+KK N Sbjct: 296 QDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVV 355 Query: 593 EGQTPAIGPD-GEPLDETSQMSDLPV------KVIH-VESGKILTGTDAPKAGQLEAW-- 642 E G D G LDE + + K++H ++ I T P+ Q +A Sbjct: 356 EDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKI 415 Query: 643 LEMNP--GYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700 E+ P +E S+ +G E+ + K + + E Sbjct: 416 TELRPFNSWEALFTKMSKTNGLSEDL-----------------IWHCKTL-------IQE 451 Query: 701 VDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760 D + N +D+ ++ + G + +++ S L + LK YQ Sbjct: 452 RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGW--------NIEQPSILNQSLSLKPYQKV 503 Query: 761 GLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAY 820 GL WL ++ + LNGILADEMGLGKTIQ IA + YL + NGP LI+VP ST+ NW Sbjct: 504 GLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-NGPHLIVVPASTIDNWLR 562 Query: 821 EFDKWAPSVVKVSYKGSPAARR--AFVPQLRSGKFNVLLTTYEYIIK---DKHILAKIRW 875 E + W P++ + Y GS R+ F R +NV++TTY I D+ + +++ Sbjct: 563 EVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKL 622 Query: 876 KYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKS 935 Y I DEGH +KN Q L T A RLLLTGTP+QN L EL +LLNF++P +F S Sbjct: 623 NYAIFDEGHMLKNMGSIRYQHLMT-INANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSS 681 Query: 936 CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYV 995 ++ + + + ++ + E+E I ++++PF+LRR+K+EV QLP K + + Sbjct: 682 STSEIRRMFSSKTKSADEQSIYEKER---IAHAKQIIKPFILRRVKEEVLKQLPPKKDRI 738 Query: 996 IKCDMSALQRVLYRHM--QAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYM-- 1051 C MS Q LY + + K + +EK+ + + N +MQLRK+ NHP + Sbjct: 739 ELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTE-------MCNVMMQLRKMANHPLLHR 791 Query: 1052 -----------------------------FQHIE--ESFSEHL-----GFTGGIVQGLDL 1075 F+ +E F H+ +DL Sbjct: 792 QYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDL 851 Query: 1076 YRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDR 1135 SGKF +L IL +L+ +V+LF Q T ++ I+E + +YLRLDG T+ +R Sbjct: 852 ILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 911 Query: 1136 GMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQ 1195 L+ FN + F+FLLST+AGGLG+NL SA+ VI+ D D NP+ D QA+DR HR+GQ Sbjct: 912 IHLIDEFN-TDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 970 Query: 1196 QNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKS 1238 EV V++L + ++EE +L + KL ++Q + D+ S Sbjct: 971 TKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGS 1013 >gi|190358532 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform a [Homo sapiens] Length = 1028 Score = 305 bits (780), Expect = 3e-82 Identities = 275/943 (29%), Positives = 428/943 (45%), Gaps = 120/943 (12%) Query: 362 DPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVV 421 +P E + + AR I ELE+L S DL+ LK L L + + Sbjct: 125 EPSEDEESQGLPTMARRNDDISELEDL--SELEDLKDAKLQTLKELFPQRSDNDLLKLIE 182 Query: 422 VCMRRDTALETAL-----NAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYL 476 D A+ AL ++ K S E ++ Q I +K R H E Sbjct: 183 STSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI---KKTRLDHGEES 239 Query: 477 NSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEE 536 N + + ++++ V KL K + RE KE+E + E + L E+ Sbjct: 240 NESAESSSNWEKQESIVL----KLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAED 295 Query: 537 GYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAEN----A 592 + + Q + + ++ Y N T+ + K + A+ KK+KK N Sbjct: 296 QDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVV 355 Query: 593 EGQTPAIGPD-GEPLDETSQMSDLPV------KVIH-VESGKILTGTDAPKAGQLEAW-- 642 E G D G LDE + + K++H ++ I T P+ Q +A Sbjct: 356 EDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKI 415 Query: 643 LEMNP--GYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSE 700 E+ P +E S+ +G E+ + K + + E Sbjct: 416 TELRPFNSWEALFTKMSKTNGLSEDL-----------------IWHCKTL-------IQE 451 Query: 701 VDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK 760 D + N +D+ ++ + G + +++ S L + LK YQ Sbjct: 452 RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGW--------NIEQPSILNQSLSLKPYQKV 503 Query: 761 GLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAY 820 GL WL ++ + LNGILADEMGLGKTIQ IA + YL + NGP LI+VP ST+ NW Sbjct: 504 GLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-NGPHLIVVPASTIDNWLR 562 Query: 821 EFDKWAPSVVKVSYKGSPAARR--AFVPQLRSGKFNVLLTTYEYIIK---DKHILAKIRW 875 E + W P++ + Y GS R+ F R +NV++TTY I D+ + +++ Sbjct: 563 EVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKL 622 Query: 876 KYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKS 935 Y I DEGH +KN Q L T A RLLLTGTP+QN L EL +LLNF++P +F S Sbjct: 623 NYAIFDEGHMLKNMGSIRYQHLMT-INANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSS 681 Query: 936 CSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYV 995 ++ + + + ++ + E+E I ++++PF+LRR+K+EV QLP K + + Sbjct: 682 STSEIRRMFSSKTKSADEQSIYEKER---IAHAKQIIKPFILRRVKEEVLKQLPPKKDRI 738 Query: 996 IKCDMSALQRVLYRHM--QAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYM-- 1051 C MS Q LY + + K + +EK+ + + N +MQLRK+ NHP + Sbjct: 739 ELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTE-------MCNVMMQLRKMANHPLLHR 791 Query: 1052 -----------------------------FQHIE--ESFSEHL-----GFTGGIVQGLDL 1075 F+ +E F H+ +DL Sbjct: 792 QYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDL 851 Query: 1076 YRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDR 1135 SGKF +L IL +L+ +V+LF Q T ++ I+E + +YLRLDG T+ +R Sbjct: 852 ILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISER 911 Query: 1136 GMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQ 1195 L+ FN + F+FLLST+AGGLG+NL SA+ VI+ D D NP+ D QA+DR HR+GQ Sbjct: 912 IHLIDEFN-TDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 970 Query: 1196 QNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKS 1238 EV V++L + ++EE +L + KL ++Q + D+ S Sbjct: 971 TKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGS 1013 >gi|146219843 Snf2-related CBP activator protein [Homo sapiens] Length = 3230 Score = 274 bits (700), Expect = 6e-73 Identities = 167/456 (36%), Positives = 254/456 (55%), Gaps = 57/456 (12%) Query: 631 TDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKI 690 +D G +EA E P + + +SDS E SE+EE+E EE+ + + EE + Sbjct: 475 SDCEPEGPVEA--EEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSAS---EESESE 529 Query: 691 PDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHA------------- 737 D+ S+ D +++ DD++GV LAR + A A + Sbjct: 530 ESEDAQSQSQAD--------EEEEDDDFGVEYLLARDEEQSEADAGSGPPTPGPTTLGPK 581 Query: 738 --------------------VTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGIL 777 T +V L++ G L++YQ GL+WLV++Y LNGIL Sbjct: 582 KEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGIL 641 Query: 778 ADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGS 837 ADEMGLGKTIQTI+L+ +L K GP LIIVP S + NW E +W PS ++Y G+ Sbjct: 642 ADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGA 701 Query: 838 PAARR-AFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV 896 R+ + F+V +T+Y+ +++D + W+Y+I+DE +KN + Q Sbjct: 702 QKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQS 761 Query: 897 LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL 956 L ++ + RRLLLTGTPLQN L ELW+L++FL+P +F+S F++WF+ P +TG ++ Sbjct: 762 L-LNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNP--LTG-MIEG 817 Query: 957 NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGV 1016 ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E+VI+C +S QR LY A+ Sbjct: 818 SQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQ-- 875 Query: 1017 LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMF 1052 + K+ G +++N +MQLRK+CNHP +F Sbjct: 876 ----TTTKETLATGHFMSVINILMQLRKVCNHPNLF 907 Score = 149 bits (377), Expect = 2e-35 Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 36/286 (12%) Query: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139 GK + L +L +L+A H+VL+F QMT ++ ++E + Y G YLRLDG+T+ E R L+ Sbjct: 2043 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2102 Query: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199 + FN F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V Sbjct: 2103 ERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161 Query: 1200 RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDES 1259 + RL + +VEE IL A K + I+ G F ++++ ++ ++ + + ++ S Sbjct: 2162 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNF---TTAYFKQQTIRELFDMPLEEPS 2218 Query: 1260 RHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDET--VNQMIARHEEEFDLFM 1317 + + P +EE+ V +T + Q + R E+E D+ Sbjct: 2219 ----------------------SSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDI-- 2254 Query: 1318 RMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEE 1363 R ++ L E +E + + E R E+EE Sbjct: 2255 ------RAATQAKAEQVAELAEFNENDGFPAGEGEEAGRPGAEDEE 2294 Score = 60.1 bits (144), Expect = 2e-08 Identities = 97/373 (26%), Positives = 124/373 (33%), Gaps = 55/373 (14%) Query: 3 TPDPPLGGTPRPGPSPGP---GPSPGAMLGPSPGPSPGSAHSMMGPSPGPP--------- 50 TP PPL PRP S P P P G P P+ G+A + P P P Sbjct: 1322 TPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARA---PMPTPTLVRPLLKLV 1378 Query: 51 -SAGHPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPP 109 S + PG P +H P S+ S P N P Sbjct: 1379 HSPSPEVSASAPGAAPLTISSPLHVP-SSLPGPASSPMPIPNS--------------SPL 1423 Query: 110 PSPMDQH-SQGYPSPLGGSEHASSPVPASG----PSSGPQMSSGPGGA-------PLDGA 157 SP+ S S L S + P PAS P S P S G A PL Sbjct: 1424 ASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPV 1483 Query: 158 DPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQM 217 P A G + P+ + + L + L+ Q P H + +PG+ + Sbjct: 1484 VPAAPGPPSLAPSGASPS-ASALTLGLATAPSLSSSQ-TPGHPLLLAPTSSHVPGLNSTV 1541 Query: 218 -----PTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272 P L P S A+ P P P AP + S + P P P Sbjct: 1542 APACSPVLVPASALASPFPSAPNPAPAQASLLAPAS-SASQALATPLAPMAAPQTAILAP 1600 Query: 273 PGQPPGGP-PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPP--- 328 PP P P P A A + TP ++ P T S A + PA +PV+ P Sbjct: 1601 SPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSST 1660 Query: 329 QTQSPGQPAQPAP 341 QT P P P Sbjct: 1661 QTMLPAPVPSPLP 1673 Score = 58.5 bits (140), Expect = 5e-08 Identities = 94/408 (23%), Positives = 135/408 (33%), Gaps = 64/408 (15%) Query: 7 PLGGTPRPGPS-PGPGPSPGAMLGPSPGPSPGSAH----------SMMGPSPGPPSAGHP 55 P P PS P P P+ ++L P+ S A +++ PSP PP A P Sbjct: 1551 PASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLP 1610 Query: 56 IPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ 115 + PG P Q P+ + + G + S A P P+P+ Sbjct: 1611 VLAPSPGAAPVLASSQTPVPVMAP-----------SSTPGTSLAS---ASPVPAPTPVLA 1656 Query: 116 HSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAP-LDGADPQ---ALGQQN-RGPT 170 PS A P P P+S ++ P AP L G+ P +LG N +GP Sbjct: 1657 -----PSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPF 1711 Query: 171 PFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGP 230 P Q ++ + P P G P L P + P Sbjct: 1712 P----------TQTLSLTPASSLVPTPAQTLSLAPG-----------PPLGPTQTLSLAP 1750 Query: 231 GPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMA 290 P P GP PA P + P + P GP +A Sbjct: 1751 APPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPA---AAQTLA 1807 Query: 291 NAAAPTSTPQKLIPPQPTGRPSPAP-PAVPPAASPVMPPQ----TQSPGQPAQPAPMVPL 345 A A T +P AP P + PV + T G P+ P+ Sbjct: 1808 LAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSF 1867 Query: 346 HQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLA 393 + R P PR ++ L+E+ R ++ RI +L G+LA Sbjct: 1868 GGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALA 1915 Score = 56.6 bits (135), Expect = 2e-07 Identities = 84/360 (23%), Positives = 127/360 (35%), Gaps = 30/360 (8%) Query: 28 LGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQ--DNMHQMHKPMESMHEKGMS 85 + P+PGP+P S PS P G +P P +N + + G++ Sbjct: 1263 VAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGLT 1322 Query: 86 DDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGP------ 139 P SG A + P P+ P+P G+ A P P Sbjct: 1323 PVPPLAPAP-RPPSSGLPAVLNPRPTLTPGR---LPTPTLGTARAPMPTPTLVRPLLKLV 1378 Query: 140 -SSGPQMS-SGPGGAPLDGADPQALGQQNRGP--TPFNQNQLHQLRAQIMAYKMLARGQP 195 S P++S S PG APL + P + GP +P L + + + + P Sbjct: 1379 HSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSV----P 1434 Query: 196 LPDHLQMAVQGKRPMPGMQQ-QMPTLPPPSVSATGPGPGPGPGPGPGP----GPAPPNYS 250 L L ++V P P +P P +VSA+GP P P P PP+ + Sbjct: 1435 LSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLA 1494 Query: 251 RPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG---PMANAAAPTSTPQKLIPPQP 307 + G + P Q PG P P P N+ + L+P Sbjct: 1495 PSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASA 1554 Query: 308 TGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367 P P+ P PA + ++ P S A P+ P+ Q+ I L P+ +L Sbjct: 1555 LASPFPSAPNPAPAQASLLAP--ASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVL 1612 Score = 55.5 bits (132), Expect = 4e-07 Identities = 40/128 (31%), Positives = 51/128 (39%), Gaps = 11/128 (8%) Query: 217 MPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNM----PPPGPSGVPPGM 272 +P PPP GP P PGP P P + GP + PPGP +PP Sbjct: 1022 VPVRPPP-----GPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQ 1076 Query: 273 PGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQS 332 P P P G ++ + P + L P P P PA PP +S ++ P T Sbjct: 1077 PNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPA--PVRLSPAPPPGSSSLLKPLTVP 1134 Query: 333 PGQPAQPA 340 PG PA Sbjct: 1135 PGYTFPPA 1142 Score = 52.4 bits (124), Expect = 4e-06 Identities = 106/413 (25%), Positives = 135/413 (32%), Gaps = 65/413 (15%) Query: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-GP---PSAGHPI 56 ++ P PLG P P PGP A P P P A M+ SP GP P++ P Sbjct: 1012 VNNPRAPLGPVP---VRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPG 1068 Query: 57 PTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-- 114 P P P P G S P + PPP Sbjct: 1069 PVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLL 1128 Query: 115 ---QHSQGYPSPLGGSEHAS--------SPVPASGPSSGPQMSSGPGGAPLDGADPQALG 163 GY P + S + VPA P+ + S A L + ++G Sbjct: 1129 KPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIG 1188 Query: 164 Q-QNRGPTPF-NQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPM---------PG 212 Q + P N L QI K+ G + Q+AV RP+ G Sbjct: 1189 QLASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQV---RQLAVGQPRPLQRNVVHLVSAG 1245 Query: 213 MQQQMPTLPP--PSVSATGPGPGPG-----PGPGPGPGPAPPNYSRPHGMGGPNMPPP-- 263 Q + + P + A P PGP P P PAP S P + +PP Sbjct: 1246 GQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLP--LAANQVPPTMV 1303 Query: 264 GPSGV---------PPGMPGQPPGGP-PKPWPEG-PMANAAAPTSTPQKLIPPQPT---- 308 +GV G+ PP P P+P G P PT TP +L P PT Sbjct: 1304 NNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRL--PTPTLGTA 1361 Query: 309 GRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMV---PLHQKQSRITPIQKP 358 P P P V P V P + AP+ PLH S P P Sbjct: 1362 RAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSP 1414 Score = 48.9 bits (115), Expect = 4e-05 Identities = 93/408 (22%), Positives = 125/408 (30%), Gaps = 76/408 (18%) Query: 3 TPDPPLGGTPRPGPSPGPGP------SPGAMLGPS--PGPSPGSAHSMMGPSP--GPPSA 52 +P PPL P PSPG P +P ++ PS PG S SA + P+P P S Sbjct: 1601 SPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSST 1660 Query: 53 GHPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH----AGMGP 108 +P P P Q ++ P G G G + P Sbjct: 1661 QTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTP 1720 Query: 109 P----PSPMDQHSQGYPSPLGGSEHAS-------SPVPASGPSSGPQMSSGPGGAPLDGA 157 P+P S PLG ++ S +P GP+ ++ P + Sbjct: 1721 ASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLL 1780 Query: 158 DPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPL--PDHLQMAVQGKRPMP-GMQ 214 P ++ P P L AQ +A + P L ++ G P+P M Sbjct: 1781 APASVQTLTLSPAPV--PTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMV 1838 Query: 215 QQMPTL-------------PPPSVSATGPGPGPGPGPGPGPGPAPPNY------------ 249 ++P P P +AT G GP P P P P P Y Sbjct: 1839 SRLPVSKDEPDTLTLRSGPPSPPSTATSFG-GPRPRRQPPPPPRSPFYLDSLEEKRKRQR 1897 Query: 250 ----------SRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299 S HG P P P GP P P P + Sbjct: 1898 SERLERIFQLSEAHGALAPVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAAHR 1957 Query: 300 QKLIPPQPTGRPS----------PAPPAVPPAASPVMPPQTQSPGQPA 337 L P Q + S P A PP+ PP +P Q A Sbjct: 1958 AVLFPQQRLDQLSEIIERFIFVMPPVEAPPPSLHACHPPPWLAPRQAA 2005 Score = 47.8 bits (112), Expect = 9e-05 Identities = 63/234 (26%), Positives = 84/234 (35%), Gaps = 45/234 (19%) Query: 125 GGSEHASSP-VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQ 183 G SE ++SP P+ SGP+ SS P G P + A +L PTP Q Sbjct: 2780 GVSETSASPGSPSVRSMSGPE-SSPPIGGPCEAAPSSSL------PTPPQQ--------- 2823 Query: 184 IMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSAT-GPGPGPGPGP---G 239 +AR H+++ V G + + PP+V G P P G Sbjct: 2824 ----PFIARR-----HIELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPADAG 2874 Query: 240 PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299 G AP + + G P PGP + P P P P P GP P P Sbjct: 2875 RGVDEAPSSTLKGKTNGAD--PVPGPETLIVADPVLEPQLIPGPQPLGPQ-----PVHRP 2927 Query: 300 QKLIPP--------QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPL 345 L+ P P R P P + A +TQ P P+ P+ PL Sbjct: 2928 NPLLSPVEKRRRGRPPKARDLPIPGTISSAGDGNSESRTQPPPHPSPLTPLPPL 2981 Score = 46.2 bits (108), Expect = 3e-04 Identities = 86/345 (24%), Positives = 122/345 (35%), Gaps = 56/345 (16%) Query: 31 SPGPSPGSAHSMMGPSPGPP-----SAGHPIPTQGPG--GYPQDNMHQMHKP---MESMH 80 +P S + S GPSP P SA I QG G G P P + + Sbjct: 2700 APSTSSSATSSPEGPSPARPPRRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRLVTVVE 2759 Query: 81 EKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPS--PLGG----SEHASSPV 134 EK + R + + G P SP + G S P+GG + +S P Sbjct: 2760 EKELVRRRRQQRGAASTLVPGVSETSASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPT 2819 Query: 135 PASGPSSGP---QMSSGPGGAPLDG------ADPQALGQQNRGPTPFNQNQLHQLRAQIM 185 P P ++ GG+P +G P A+ ++ P N++ R Sbjct: 2820 PPQQPFIARRHIELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDE 2879 Query: 186 AYKMLARGQPLPDHLQMAVQGKRPMPGMQQQM---PTLPPPSVSATGPGPGP-GPGPGPG 241 A +G+ G P+PG + + P L P + PGP P GP P Sbjct: 2880 APSSTLKGK---------TNGADPVPGPETLIVADPVLEPQLI----PGPQPLGPQPVHR 2926 Query: 242 PGPA-PPNYSRPHGMG--GPNMPPPGP-SGVPPGMPGQPPGGPPKPWPEGPMANA-AAPT 296 P P P R G ++P PG S G PP P P P+ PT Sbjct: 2927 PNPLLSPVEKRRRGRPPKARDLPIPGTISSAGDGNSESRTQPPPHPSPLTPLPPLLVCPT 2986 Query: 297 STPQKLI---------PPQPTGRPSPAPPAVPPAASPVMPPQTQS 332 +T + P + GRP PP+ P+ PV+ + S Sbjct: 2987 ATVANTVTTVTISTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSTS 3031 Score = 43.1 bits (100), Expect = 0.002 Identities = 113/526 (21%), Positives = 189/526 (35%), Gaps = 110/526 (20%) Query: 258 PNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSP--AP 315 P +P V GM G P P A++++P S+ I PQ + S P Sbjct: 10 PQLPVLQTQMVSDGMTGSNPVSP---------ASSSSPASSGAGGISPQHIAQDSSLDGP 60 Query: 316 PAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQ 375 P P A+ +P + S Q A A P +K EI ++ ++ + Sbjct: 61 PGPPDGAT--VPLEGFSLSQAADLANKGPKWEKSH-------------AEIAEQAKH--E 103 Query: 376 ARIAHRIQELENLPGSLAGDLRTKATIELKAL-RLLNFQRQLRQEVVVCMRRDTALETAL 434 A I RI EL R + LK L ++ R +C Sbjct: 104 AEIETRIAEL-----------RKEGFWSLKRLPKVPEPPRPKGHWDYLCEEMQWLSADFA 152 Query: 435 NAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVT 494 + +KR + + R+ + ++Q+ ++ER RR++ + AKD +++ +V Sbjct: 153 QERRWKRGVARKV--VRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQFWSNVE 210 Query: 495 GKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLL 554 + Q K+ R+E++R + L D L +++ Sbjct: 211 KVV-----------------QFKQQSRLEEKRKKAL----------------DLHLDFIV 237 Query: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSD 614 QT++Y L++ + Q + A A + PA D E D Q + Sbjct: 238 GQTEKYSDLLSQSLNQPLTSSKAGSSPCLGSSSAASSP--PPPASRLDDEDGDFQPQEDE 295 Query: 615 LPVKVIHVESGKILTGTDAP----------KAGQL---EAWLEMNPGYEVAPRSDSEESG 661 +E + G DA + G+L E + P P S S+ Sbjct: 296 EEDDEETIEVEEQQEGNDAEAQRREIELLRREGELPLEELLRSLPPQLLEGPSSPSQTPS 355 Query: 662 SEEE------EEEEEEEQPQAAQ--PPTLPVEEKKKIP-DPDSDDVSEVDARHIIENAKQ 712 S + EE EEE PQ + PP V ++ K P PD DD N ++ Sbjct: 356 SHDSDTRDGPEEGAEEEPPQVLEIKPPPSAVTQRNKQPWHPDEDD------EEFTANEEE 409 Query: 713 DVDDEYGVSQALARGLQSYYAVAHAV-TERVDKQSALMVNGVLKQY 757 D+E +A Q V HA+ + ++ L + +L+QY Sbjct: 410 AEDEE----DTIAAEEQLEGEVDHAMELSELAREGELSMEELLQQY 451 Score = 42.4 bits (98), Expect = 0.004 Identities = 34/117 (29%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 214 QQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMP 273 Q + T PP A P P P P P P AP + P + P + P P P + Sbjct: 2419 QTRSTTTPPRCSPARERVPRPAPRPRPTPASAPA--AIPALVPVP-VSAPVPISAPNPIT 2475 Query: 274 GQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVM--PP 328 P P P P + ++P TP P P P PA + +SP++ PP Sbjct: 2476 ILPVHILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPP 2532 Score = 40.8 bits (94), Expect = 0.011 Identities = 38/143 (26%), Positives = 52/143 (36%), Gaps = 14/143 (9%) Query: 223 PSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPK 282 P GPG G G G G + R P P S G + G Sbjct: 2357 PQEEEEGPGAGDESSCGTGGG----THRRSKKAKAPERPGTRVSERLRGARAETQGANHT 2412 Query: 283 PWPEGPMANAAAPTSTPQKLIP-----PQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPA 337 P A+ T+TP + P P+P RP P P + P A ++P +P + Sbjct: 2413 PVIS---AHQTRSTTTPPRCSPARERVPRPAPRPRPTPASAPAAIPALVPVPVSAPVPIS 2469 Query: 338 QPAP--MVPLHQKQSRITPIQKP 358 P P ++P+H S P Q P Sbjct: 2470 APNPITILPVHILPSPPPPSQIP 2492 Score = 38.1 bits (87), Expect = 0.072 Identities = 86/363 (23%), Positives = 121/363 (33%), Gaps = 48/363 (13%) Query: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP---GPPSAGHPIPTQG 60 P PP P SP P P P+ P P + SP GPPS Sbjct: 2483 PSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSV-------- 2534 Query: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120 P N+ +P + + ++ P ++ + + PP + + Sbjct: 2535 PISASVTNLPLGLRPEAELCAQALAS-PESLELASVASSETSSLSLVPPKDLLPVAVEIL 2593 Query: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGG----APLDGADPQALGQQNRGPT-PFNQN 175 P SE S P S PS + S P G AP D A+ L G P + Sbjct: 2594 PV----SEKNLSLTP-SAPSLTLEAGSIPNGQEQEAP-DSAEGTTLTVLPEGEELPLCVS 2647 Query: 176 QLHQLRAQIMAYKMLARGQPLPDHLQM------AVQGKRPM--PGMQQQMPTL----PPP 223 + + L A A +PL + L+ + K P P Q++ T P Sbjct: 2648 ESNGLELPPSA----ASDEPLQEPLEADRTSEELTEAKTPTSSPEKPQELVTAEVAAPST 2703 Query: 224 SVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG------QPP 277 S SAT GP P P + R G G P PPGP V +PG + Sbjct: 2704 SSSATSSPEGPSPARPPRRRTSADVEIRGQGTGRPGQ-PPGPK-VLRKLPGRLVTVVEEK 2761 Query: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPV-MPPQTQSPGQP 336 + + A+ P + P P+ R P + PP P P + P P Sbjct: 2762 ELVRRRRQQRGAASTLVPGVSETSASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPTPP 2821 Query: 337 AQP 339 QP Sbjct: 2822 QQP 2824 Score = 37.7 bits (86), Expect = 0.095 Identities = 47/183 (25%), Positives = 61/183 (33%), Gaps = 22/183 (12%) Query: 194 QPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPH 253 QP P + + P M P PP ++ PGP P P G P P Sbjct: 1035 QPTPGPVPQVL----PASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPL 1090 Query: 254 GMGGPNMPPPGPS----GVPPG----MPGQPPGG----PPKPWPEGPMANAAAPTSTPQK 301 G+ PP P+ PP P PPG P P G AA T+T Sbjct: 1091 GVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTT 1150 Query: 302 LIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGL 361 T P+P P SP M + S G+ + L Q+ P+ G Sbjct: 1151 TATATTTAVPAPTPAPQRLILSPDMQARLPS-GEVVSIGQLASLAQR-----PVANAGGS 1204 Query: 362 DPV 364 P+ Sbjct: 1205 KPL 1207 Score = 36.6 bits (83), Expect = 0.21 Identities = 56/262 (21%), Positives = 98/262 (37%), Gaps = 49/262 (18%) Query: 1267 GSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRRE 1326 GS+S A + PPPA D + +EDE DDE ++ + E R +++ R Sbjct: 267 GSSSAASSPPPPASRLDDEDGDFQPQEDEEEDDEETIEVEEQQEGNDAEAQRREIELLRR 326 Query: 1327 EARNPKRK------PRLME----EDELPSWIIKDDAEVERLTCEEEEEKMF------GRG 1370 E P + P+L+E + PS D + EEE ++ Sbjct: 327 EGELPLEELLRSLPPQLLEGPSSPSQTPSSHDSDTRDGPEEGAEEEPPQVLEIKPPPSAV 386 Query: 1371 SRHRKEVDYSDSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTL- 1429 ++ K+ + D E+ + +D DT +A Q + + S+ EG L Sbjct: 387 TQRNKQPWHPDEDDEEFTANEEEAEDEEDT---IAAEEQLEGEVDHAMELSELAREGELS 443 Query: 1430 --------------------EEIEEEVRQKKS--------SRKRKRDSDAGSSTPTTSTR 1461 +E E+EV S + D+ S + + R Sbjct: 444 MEELLQQYAGAYAPGSGSSEDEDEDEVDANSSDCEPEGPVEAEEPPQEDSSSQSDSVEDR 503 Query: 1462 SRDKDDE-SKKQKKRGRPPAEK 1482 S D++DE S++++ G +E+ Sbjct: 504 SEDEEDEHSEEEETSGSSASEE 525 Score = 36.6 bits (83), Expect = 0.21 Identities = 36/137 (26%), Positives = 51/137 (37%), Gaps = 9/137 (6%) Query: 236 PGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAP 295 P P P P P +R M P G + V P P G P P GP +A Sbjct: 981 PDPPPRPKPVKMKVNR---MLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPT 1037 Query: 296 TSTPQKLIPPQPTGRPSPAPPAVPPAASP----VMPPQTQSPGQPAQ--PAPMVPLHQKQ 349 +++P SPA P + PA+ P ++PP + G Q P+P+ L Sbjct: 1038 PGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTS 1097 Query: 350 SRITPIQKPRGLDPVEI 366 TP + P + Sbjct: 1098 RPPTPTLSLKPTPPAPV 1114 >gi|38708321 INO80 complex homolog 1 [Homo sapiens] Length = 1556 Score = 259 bits (662), Expect = 2e-68 Identities = 191/657 (29%), Positives = 326/657 (49%), Gaps = 77/657 (11%) Query: 437 KAYKRSKRQSLREARITEKLEKQQKIEQERK-RRQKHQEYLNSILQH---AKDFKEYHRS 492 K +K K+ + ++ +K + +++ E RR HQ + + H K+ H S Sbjct: 210 KKFKEEKKLKAKLKKVKKKRRRDEELSSEESPRRHHHQTKVFAKFSHDAPPPGTKKKHLS 269 Query: 493 VTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ-KKDKRLA 551 + Q + + + ++E K N+ +K R L + RKL Q K+ R A Sbjct: 270 IE---QLNARRRKVWLSIVKKELPKANK--QKASARNLFLTNS---RKLAHQCMKEVRRA 321 Query: 552 YLLQQTD--EYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDET 609 L Q + E + L ++ EK +K+ +K+AE + LDE Sbjct: 322 ALQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRKRAEKE-------ALEQRKLDEE 374 Query: 610 SQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEE---- 665 + + + ++ ++T T+ + ++ + D G +EE Sbjct: 375 MREAKRQQRKLNF----LITQTELY-------------AHFMSRKRDMGHDGIQEEILRK 417 Query: 666 -EEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV------SEVDARHIIENAKQDVDDEY 718 E+ + Q + + ++ D DS+ + +A HI + + D++ Sbjct: 418 LEDSSTQRQIDIGGGVVVNITQE----DYDSNHFKAQALKNAENAYHIHQARTRSFDEDA 473 Query: 719 GVSQALA--------RGLQSYYAVAH-AVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769 S+A A G Y++A+ ++ D + NG LK YQ+KG+ WL +LY Sbjct: 474 KESRAAALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLY 533 Query: 770 NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829 +NGILADEMGLGKT+Q+IAL+ +L E + I GPFLII P STL+NW EF ++ P Sbjct: 534 EQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFTRFVPKF 593 Query: 830 VKVSYKGSPAAR---RAFVPQ----LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDE 882 + Y G+P R R F Q + F+V++T+Y+ +++D +++W+YM++DE Sbjct: 594 KVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDE 653 Query: 883 GHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 942 +K+ ++L + RLLLTGTP+QN + ELWALL+F++PT+F S F +W Sbjct: 654 AQALKSSSSVRWKIL-LQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEW 712 Query: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSA 1002 F+ E +E + RLH +L+PF+LRR+KK+VE +L +K+E ++ C +++ Sbjct: 713 FSKDIESHAENKSAIDENQ---LSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTS 769 Query: 1003 LQRVLYRHMQAK---GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIE 1056 Q++LY+ ++ K LL ++ + T +LMN +MQ RK+CNHP +F+ E Sbjct: 770 RQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFERQE 826 Score = 155 bits (391), Expect = 4e-37 Identities = 79/180 (43%), Positives = 118/180 (65%), Gaps = 3/180 (1%) Query: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138 SGK LD +L +L++ H+VL++ QMT ++ ++E+Y YR Y+RLDG++K +R + Sbjct: 1100 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1159 Query: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198 + F ++ F+FLLSTRAGGLG+NL +ADTVI +DSDWNP D QA DRAHR+GQ + Sbjct: 1160 VADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1218 Query: 1199 VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE 1258 V V RL ++EE+IL AK K + + VI G F K + + + + +L+ EE ++ Sbjct: 1219 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF--KPDTLKPKEVVSLLLDDEELEK 1276 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.132 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,974,946 Number of Sequences: 37866 Number of extensions: 5769311 Number of successful extensions: 129430 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1187 Number of HSP's successfully gapped in prelim test: 2888 Number of HSP's that attempted gapping in prelim test: 38323 Number of HSP's gapped (non-prelim): 46058 length of query: 1679 length of database: 18,247,518 effective HSP length: 116 effective length of query: 1563 effective length of database: 13,855,062 effective search space: 21655461906 effective search space used: 21655461906 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.