Guide to the Human Genome
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Name: NTNG2 Sequence: fasta or formatted (530aa) NCBI GI: 190014607
Description:

netrin G2

Referenced in:

Netrins and Laminins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         34           2
 C cysteine            7.9         42           1
 D aspartate           6.2         33           3
 E glutamate           6.4         34           3
 F phenylalanine       3.2         17           2
 G glycine             7.5         40           2
 H histidine           2.8         15           1
 I isoleucine          2.1         11           1
 K lysine              3.8         20           2
 L leucine             9.2         49           4
 M methionine          2.1         11           1
 N asparagine          5.1         27           1
 P proline             5.5         29           2
 Q glutamine           2.8         15           1
 R arginine            7.5         40           2
 S serine              5.8         31           4
 T threonine           5.3         28           2
 V valine              4.2         22           2
 W tryptophan          1.7          9           1
 Y tyrosine            4.3         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   netrin G2 
NTNG1                 0.589   netrin G1 isoform 1 
NTNG1                 0.370   netrin G1 isoform 2 
NTNG1                 0.367   netrin G1 isoform 3 
LAMC1                 0.163   laminin, gamma 1 precursor 
NTN1                  0.158   netrin 1 
LAMC3                 0.152   laminin, gamma 3 precursor 
NTN3                  0.149   netrin 3 
LAMA5                 0.145   laminin alpha 5 
LAMA3                 0.127   laminin alpha 3 subunit isoform 1 
LAMA3                 0.127   laminin alpha 3 subunit isoform 3 
LAMB4                 0.126   laminin, beta 4 
NTN4                  0.121   netrin 4 
LAMB2                 0.118   laminin, beta 2 precursor 
LAMB3                 0.112   laminin, beta 3 precursor 
LAMB3                 0.112   laminin, beta 3 precursor 
LAMB3                 0.112   laminin, beta 3 precursor 
LAMA1                 0.108   laminin, alpha 1 precursor 
LAMB1                 0.103   laminin, beta 1 precursor 
LAMA2                 0.096   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.096   laminin alpha 2 subunit isoform a precursor 
USH2A                 0.089   usherin isoform B 
USH2A                 0.089   usherin isoform A 
NTN5                  0.080   netrin 5 
LAMC2                 0.064   laminin, gamma 2 isoform b precursor 
LAMC2                 0.064   laminin, gamma 2 isoform a precursor 
HSPG2                 0.063   heparan sulfate proteoglycan 2 
MEGF9                 0.044   multiple EGF-like-domains 9 
LAMA3                 0.044   laminin alpha 3 subunit isoform 4 
LAMA3                 0.044   laminin alpha 3 subunit isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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