NTN5 23714

Name: NTN5	Sequence: fasta or formatted (489aa)		NCBI GI: 24308065
Description: netrin 5		Referenced in: Netrins and Laminins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 53 3 C cysteine 7.4 36 1 D aspartate 2.9 14 1 E glutamate 2.2 11 2 F phenylalanine 2.0 10 1 G glycine 9.6 47 2 H histidine 4.5 22 2 I isoleucine 1.0 5 1 K lysine 0.8 4 1 L leucine 9.4 46 5 M methionine 0.8 4 1 N asparagine 1.6 8 1 P proline 10.4 51 2 Q glutamine 5.7 28 2 R arginine 11.2 55 2 S serine 5.5 27 2 T threonine 6.1 30 3 V valine 3.9 19 1 W tryptophan 2.2 11 1 Y tyrosine 1.6 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 netrin 5 NTN1 0.346 netrin 1 NTN3 0.337 netrin 3 LAMB2 0.144 laminin, beta 2 precursor LAMC3 0.133 laminin, gamma 3 precursor LAMB4 0.132 laminin, beta 4 NTN4 0.130 netrin 4 LAMB3 0.125 laminin, beta 3 precursor LAMB3 0.125 laminin, beta 3 precursor LAMB3 0.125 laminin, beta 3 precursor LAMC1 0.120 laminin, gamma 1 precursor LAMB1 0.119 laminin, beta 1 precursor USH2A 0.114 usherin isoform B USH2A 0.114 usherin isoform A LAMA5 0.112 laminin alpha 5 LAMA3 0.096 laminin alpha 3 subunit isoform 1 LAMA3 0.096 laminin alpha 3 subunit isoform 3 NTNG1 0.093 netrin G1 isoform 1 LAMA1 0.093 laminin, alpha 1 precursor NTNG2 0.086 netrin G2 LAMA2 0.085 laminin alpha 2 subunit isoform b precursor LAMA2 0.085 laminin alpha 2 subunit isoform a precursor HSPG2 0.071 heparan sulfate proteoglycan 2 LAMA3 0.059 laminin alpha 3 subunit isoform 4 LAMA3 0.059 laminin alpha 3 subunit isoform 2 LAMC2 0.056 laminin, gamma 2 isoform b precursor LAMC2 0.056 laminin, gamma 2 isoform a precursor LAMA4 0.052 laminin, alpha 4 isoform 2 precursor LAMA4 0.052 laminin, alpha 4 isoform 1 precursor LAMA4 0.052 laminin, alpha 4 isoform 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.