Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 189571629

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|189571629 membrane bound O-acyltransferase domain containing
4 [Homo sapiens]
         (435 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|189571629 membrane bound O-acyltransferase domain containing ...   911   0.0  
gi|40548387 O-acyltransferase (membrane bound) domain containing...   119   4e-27
gi|122937404 membrane bound O-acyltransferase domain containing ...   119   4e-27
gi|42542394 lysophosphatidylcholine acyltransferase 3 [Homo sapi...    48   2e-05
gi|225703079 membrane bound O-acyltransferase domain containing ...    47   4e-05
gi|225703081 membrane bound O-acyltransferase domain containing ...    44   4e-04
gi|225703033 membrane bound O-acyltransferase domain containing ...    44   4e-04
gi|10835169 solute carrier family 11 (proton-coupled divalent me...    32   1.1  
gi|34452721 GA binding protein transcription factor, alpha subun...    30   4.3  
gi|4885327 free fatty acid receptor 1 [Homo sapiens]                   30   5.6  
gi|21389515 ring finger protein 145 [Homo sapiens]                     30   5.6  
gi|25777748 piggyBac transposable element derived 5 [Homo sapiens]     30   5.6  
gi|55953106 phospholipase A2 receptor 1 isoform 2 precursor [Hom...    29   9.6  
gi|55953104 phospholipase A2 receptor 1 isoform 1 precursor [Hom...    29   9.6  
gi|8923477 transmembrane protein 160 [Homo sapiens]                    29   9.6  

>gi|189571629 membrane bound O-acyltransferase domain containing 4
           [Homo sapiens]
          Length = 435

 Score =  911 bits (2355), Expect = 0.0
 Identities = 435/435 (100%), Positives = 435/435 (100%)

Query: 1   MEWLWLFFLHPISFYQGAAFPFALLFNYLCIMDSFSTRARYLFLLTGGGALAVAAMGSYA 60
           MEWLWLFFLHPISFYQGAAFPFALLFNYLCIMDSFSTRARYLFLLTGGGALAVAAMGSYA
Sbjct: 1   MEWLWLFFLHPISFYQGAAFPFALLFNYLCIMDSFSTRARYLFLLTGGGALAVAAMGSYA 60

Query: 61  VLVFTPAVCAVALLCSLAPQQVHRWTFCFQMSWQTLCHLGLHYTEYYLHEPPSVRFCITL 120
           VLVFTPAVCAVALLCSLAPQQVHRWTFCFQMSWQTLCHLGLHYTEYYLHEPPSVRFCITL
Sbjct: 61  VLVFTPAVCAVALLCSLAPQQVHRWTFCFQMSWQTLCHLGLHYTEYYLHEPPSVRFCITL 120

Query: 121 SSLMLLTQRVTSLSLDICEGKVKAASGGFRSRSSLSEHVCKALPYFSYLLFFPALLGGSL 180
           SSLMLLTQRVTSLSLDICEGKVKAASGGFRSRSSLSEHVCKALPYFSYLLFFPALLGGSL
Sbjct: 121 SSLMLLTQRVTSLSLDICEGKVKAASGGFRSRSSLSEHVCKALPYFSYLLFFPALLGGSL 180

Query: 181 CSFQRFQARVQGSSALHPRHSFWALSWRGLQILGLECLNVAVSRVVDAGAGLTDCQQFEC 240
           CSFQRFQARVQGSSALHPRHSFWALSWRGLQILGLECLNVAVSRVVDAGAGLTDCQQFEC
Sbjct: 181 CSFQRFQARVQGSSALHPRHSFWALSWRGLQILGLECLNVAVSRVVDAGAGLTDCQQFEC 240

Query: 241 IYVVWTTAGLFKLTYYSHWILDDSLLHAAGFGPELGQSPGEEGYVPDADIWTLERTHRIS 300
           IYVVWTTAGLFKLTYYSHWILDDSLLHAAGFGPELGQSPGEEGYVPDADIWTLERTHRIS
Sbjct: 241 IYVVWTTAGLFKLTYYSHWILDDSLLHAAGFGPELGQSPGEEGYVPDADIWTLERTHRIS 300

Query: 301 VFSRKWNQSTARWLRRLVFQHSRAWPLLQTFAFSAWWHGLHPGQVFGFVCWAVMVEADYL 360
           VFSRKWNQSTARWLRRLVFQHSRAWPLLQTFAFSAWWHGLHPGQVFGFVCWAVMVEADYL
Sbjct: 301 VFSRKWNQSTARWLRRLVFQHSRAWPLLQTFAFSAWWHGLHPGQVFGFVCWAVMVEADYL 360

Query: 361 IHSFANEFIRSWPMRLFYRTLTWAHTQLIIAYIMLAVEVRSLSSLWLLCNSYNSVFPMVY 420
           IHSFANEFIRSWPMRLFYRTLTWAHTQLIIAYIMLAVEVRSLSSLWLLCNSYNSVFPMVY
Sbjct: 361 IHSFANEFIRSWPMRLFYRTLTWAHTQLIIAYIMLAVEVRSLSSLWLLCNSYNSVFPMVY 420

Query: 421 CILLLLLAKRKHKCN 435
           CILLLLLAKRKHKCN
Sbjct: 421 CILLLLLAKRKHKCN 435


>gi|40548387 O-acyltransferase (membrane bound) domain containing 2
           [Homo sapiens]
          Length = 520

 Score =  119 bits (299), Expect = 4e-27
 Identities = 101/424 (23%), Positives = 189/424 (44%), Gaps = 36/424 (8%)

Query: 36  STRARYLFLLTGGGALAVAAMGSYAVLVFTPAVCAVALLCSLAPQQVHRWTFCFQMSWQT 95
           S+  R++     G  LA+   G YA+     +  +  ++  +  + +H + F F + + T
Sbjct: 52  SSFIRHVVATLLGLYLALFCFGWYALHFLVQSGISYCIMIIIGVENMHNYCFVFALGYLT 111

Query: 96  LCHLGLHYTEYYLHEPPSVRFCITLSSLMLLTQRVTSLSLDICEGKVKAASGGFRSRSSL 155
           +C +    T  Y+ +        +   +M++TQ++TSL+ +I +G  +       S+  L
Sbjct: 112 VCQV----TRVYIFDYGQYSADFS-GPMMIITQKITSLACEIHDGMFRKDEELTSSQRDL 166

Query: 156 S-EHVCKALPYFSYLLFFPALLGGSLCSFQRFQARVQGSS-----------------ALH 197
           +   +   L Y SY   F  +L G LCS++ +   ++G S                    
Sbjct: 167 AVRRMPSLLEYLSYNCNFMGILAGPLCSYKDYITFIEGRSYHITQSGENGKEETQYERTE 226

Query: 198 PRHSFWALSWRGLQILGLE-------CLNVAVSRVVDAGAGLTDCQQFECIYVVWTTAGL 250
           P  +   +  + L + GL        C  + V   +D     T     + IY+  +    
Sbjct: 227 PSPNTAVV--QKLLVCGLSLLFHLTICTTLPVEYNIDEHFQATASWPTKIIYLYISLLAA 284

Query: 251 FKLTYYSHWILDDSLLHAAGFGPELGQSPGEEGY--VPDADIWTLERTHRISVFSRKWNQ 308
            +  YY  W L D++ +AAGFG       G   +  + +  I  +E +    +F   WN 
Sbjct: 285 -RPKYYFAWTLADAINNAAGFGFRGYDENGAARWDLISNLRIQQIEMSTSFKMFLDNWNI 343

Query: 309 STARWLRRLVFQHSRAWPLLQTFAFSAWWHGLHPGQVFGFVCWAVM-VEADYLIHSFANE 367
            TA WL+R+ ++ +   P +QTF  SA WHG++PG    F+   +M + A  + ++F + 
Sbjct: 344 QTALWLKRVCYERTSFSPTIQTFILSAIWHGVYPGYYLTFLTGVLMTLAARAMRNNFRHY 403

Query: 368 FIRSWPMRLFYRTLTWAHTQLIIAYIMLAVEVRSLSSLWLLCNSYNSVFPMVYCILLLLL 427
           FI    ++LFY  +TW  TQ+ I+Y ++   + S+       +S+     ++  ++LLLL
Sbjct: 404 FIEPSQLKLFYDVITWIVTQVAISYTVVPFVLLSIKPSLTFYSSWYYCLHILGILVLLLL 463

Query: 428 AKRK 431
             +K
Sbjct: 464 PVKK 467


>gi|122937404 membrane bound O-acyltransferase domain containing 1
           [Homo sapiens]
          Length = 495

 Score =  119 bits (299), Expect = 4e-27
 Identities = 102/429 (23%), Positives = 192/429 (44%), Gaps = 57/429 (13%)

Query: 36  STRARYLFLLTGGGALAVAAMGSYAVLVFTPAVCAVALLCSLAPQQVHRWTFCFQMSWQT 95
           S+  R+      G    +   G Y+V +F   +   A++ + +   +HR++F   M + T
Sbjct: 60  SSDVRHAVATIFGIYFVIFCFGWYSVHLFVLVLMCYAIMVTASVSNIHRYSFFVAMGYLT 119

Query: 96  LCHLGLHYTEYYLHEPPSVRFCITLSSLMLLTQRVTSLSLDICEGKVKAASGGFRSRSSL 155
           +CH+   Y  +Y      +        LM++TQ++T+L+  + +G  + A      +  L
Sbjct: 120 ICHISRIYIFHY-----GILTTDFSGPLMIVTQKITTLAFQVHDGLGRRAEDLSAEQHRL 174

Query: 156 SEHVCKA-LPYFSYLLFFPALLGGSLCSFQRFQARVQGSSALHPRHSFWALSWR------ 208
           +  V  + L Y SYLL F +++ G   +F+ + A ++G    H       ++W+      
Sbjct: 175 AIKVKPSFLEYLSYLLNFMSVIAGPCNNFKDYIAFIEGK---HIHMKLLEVNWKRKGFHS 231

Query: 209 --------------GLQILGLECLNVAVSRVVDAGAGLTDCQQFEC--------IYVVWT 246
                         G+ ++ L  L + +++       + D    +         +YVV  
Sbjct: 232 LPEPSPTGAVIHKLGITLVSL-LLFLTLTKTFPVTCLVDDWFVHKASFPARLCYLYVVMQ 290

Query: 247 TAGLFKLTYYSHWILDDSLLHAAGFGPELGQSPGEEGY--VPDADIWTLERTHRISVFSR 304
            +   K  YY  W L D++ +AAGFG       G   +  + + +IW +E      ++  
Sbjct: 291 AS---KPKYYFAWTLADAVNNAAGFGFSGVDKNGNFCWDLLSNLNIWKIETATSFKMYLE 347

Query: 305 KWNQSTARWLRRLVFQHSRAWPLLQTFAFSAWWHGLHPGQVFGFVCWAVMVEADYLI-HS 363
            WN  TA WL+ + +Q    +P + TF  SA WHG++PG  F F+   ++  A   + ++
Sbjct: 348 NWNIQTATWLKCVCYQRVPWYPTVLTFILSALWHGVYPGYYFTFLTGILVTLAARAVRNN 407

Query: 364 FANEFIRSWPMRLFYRTLTWAHTQLIIAY-----IMLAVEVRSLSSLWLLCNSYNSVFPM 418
           + + F+ S  ++  Y   TWA TQL ++Y     +MLAVE           + Y S++  
Sbjct: 408 YRHYFLSSRALKAVYDAGTWAVTQLAVSYTVAPFVMLAVEP--------TISLYKSMYFY 459

Query: 419 VYCILLLLL 427
           ++ I LL++
Sbjct: 460 LHIISLLII 468


>gi|42542394 lysophosphatidylcholine acyltransferase 3 [Homo
           sapiens]
          Length = 487

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 79/359 (22%), Positives = 141/359 (39%), Gaps = 42/359 (11%)

Query: 12  ISFYQGAAFPFALLF-NYLCIMDSFSTRARYLFLLTGGGALAVAAMGSYAVLVFTPAVCA 70
           IS + G  +PFAL + +YL   +++     +LF    G ++A    G+    ++   +C 
Sbjct: 46  ISIFLG--YPFALFYRHYLFYKETYLI---HLFHTFTGLSIAYFNFGNQ---LYHSLLCI 97

Query: 71  VA--LLCSLAPQQVHR--WTFCFQMSWQTLCHLGLHYTEYYLHEPP-SVRFCITLSSLML 125
           V   L+  L  + +     TFCFQM++      G +YT    ++   ++  C+       
Sbjct: 98  VLQFLILRLMGRTITAVLTTFCFQMAYLLA---GYYYTATGNYDIKWTMPHCV------- 147

Query: 126 LTQRVTSLSLDICEGKVKAASGGFRSRSSLSEHVCKALPYFSYLLFFPALLGGSLCSFQR 185
           LT ++  L++D  +G     S     +      V   L    +  F+ A L G   S   
Sbjct: 148 LTLKLIGLAVDYFDGGKDQNSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNH 207

Query: 186 FQARVQGS----SALHPRHSFWALSWRGLQILGLECLNVAVSRVVDAGAGLTDCQQ---- 237
           +   VQG         P     AL    L +  L    +    + +      D       
Sbjct: 208 YMKLVQGELIDIPGKIPNSIIPALKRLSLGLFYLVGYTLLSPHITEDYLLTEDYDNHPFW 267

Query: 238 FECIYV-VWTTAGLFKLTYYSHWILDDSLLHAAGFGPELGQSPGEEGYVPDAD--IWTLE 294
           F C+Y+ +W    L+K  Y + W++ + +    G G    +  G+  +   A+  +W  E
Sbjct: 268 FRCMYMLIWGKFVLYK--YVTCWLVTEGVCILTGLGFNGFEEKGKAKWDACANMKVWLFE 325

Query: 295 RTHRISVFSRKWNQSTARWLRRLVFQHSRAWPLLQ-----TFAFSAWWHGLHPGQVFGF 348
              R +     +N +T  W+ R +F+  +     +     +  F A WHGLH G +  F
Sbjct: 326 TNPRFTGTIASFNINTNAWVARYIFKRLKFLGNKELSQGLSLLFLALWHGLHSGYLVCF 384


>gi|225703079 membrane bound O-acyltransferase domain containing 7
           isoform 1 [Homo sapiens]
          Length = 472

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 77/351 (21%), Positives = 136/351 (38%), Gaps = 64/351 (18%)

Query: 53  VAAMGSYAVLVFTPAVCAVALLCSLAPQQVHRWTFCFQMSWQTLCHLGLHYTEYYLHEPP 112
           V  +G++A++   P  C    L          WTF + + ++ L  LGL         P 
Sbjct: 55  VTILGTWALIQAQPCSCHALALA---------WTFSYLLFFRALSLLGL---------PT 96

Query: 113 SVRFCITLSSLMLLTQRVTSLSLDICE---GKVKAASGGFRSRSSLS--EHVCKALPYFS 167
              F  T +  +LLT ++ SL+ ++ +    + K  + GF    +L     V   +   S
Sbjct: 97  PTPF--TNAVQLLLTLKLVSLASEVQDLHLAQRKEMASGFSKGPTLGLLPDVPSLMETLS 154

Query: 168 YLLFFPALLGGSLCSFQRF-----QARVQGSSALHP--RHSFWALSWRGLQILGLECLNV 220
           Y   +  ++ G    ++ +     Q       +L P  R ++ A  +  L +L      +
Sbjct: 155 YSYCYVGIMTGPFFRYRTYLDWLEQPFPGAVPSLRPLLRRAWPAPLFGLLFLLSSHLFPL 214

Query: 221 AVSRVVDAGAGLTDCQQFECIYVVWTTAGLFKLTYYSHWILDDSLLHAAGFG-------- 272
              R     A     + F  I V +     F++ +Y  WI  +    AAGFG        
Sbjct: 215 EAVREDAFYARPLPARLFYMIPVFFA----FRMRFYVAWIAAECGCIAAGFGAYPVAAKA 270

Query: 273 -----PELGQSPG---------EEGY--VPDADIWTLERTHRISVFSRKWNQSTARWLRR 316
                P L   P          E  Y  + + D ++ +   R+    R WN +   WL +
Sbjct: 271 RAGGGPTLQCPPPSSPEKAASLEYDYETIRNIDCYSTDFCVRVRDGMRYWNMTVQWWLAQ 330

Query: 317 LVFQHS--RAWPLLQ--TFAFSAWWHGLHPGQVFGFVCWAVMVEADYLIHS 363
            +++ +  R++ L    T   SA+WHGLHPG    F+   + + A+  + S
Sbjct: 331 YIYKSAPARSYVLRSAWTMLLSAYWHGLHPGYYLSFLTIPLCLAAEGRLES 381


>gi|225703081 membrane bound O-acyltransferase domain containing 7
           isoform 2 [Homo sapiens]
          Length = 399

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 28/141 (19%)

Query: 251 FKLTYYSHWILDDSLLHAAGFG-------------PELGQSPG---------EEGY--VP 286
           F++ +Y  WI  +    AAGFG             P L   P          E  Y  + 
Sbjct: 168 FRMRFYVAWIAAECGCIAAGFGAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIR 227

Query: 287 DADIWTLERTHRISVFSRKWNQSTARWLRRLVFQHS--RAWPLLQ--TFAFSAWWHGLHP 342
           + D ++ +   R+    R WN +   WL + +++ +  R++ L    T   SA+WHGLHP
Sbjct: 228 NIDCYSTDFCVRVRDGMRYWNMTVQWWLAQYIYKSAPARSYVLRSAWTMLLSAYWHGLHP 287

Query: 343 GQVFGFVCWAVMVEADYLIHS 363
           G    F+   + + A+  + S
Sbjct: 288 GYYLSFLTIPLCLAAEGRLES 308


>gi|225703033 membrane bound O-acyltransferase domain containing 7
           isoform 2 [Homo sapiens]
          Length = 399

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 28/141 (19%)

Query: 251 FKLTYYSHWILDDSLLHAAGFG-------------PELGQSPG---------EEGY--VP 286
           F++ +Y  WI  +    AAGFG             P L   P          E  Y  + 
Sbjct: 168 FRMRFYVAWIAAECGCIAAGFGAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIR 227

Query: 287 DADIWTLERTHRISVFSRKWNQSTARWLRRLVFQHS--RAWPLLQ--TFAFSAWWHGLHP 342
           + D ++ +   R+    R WN +   WL + +++ +  R++ L    T   SA+WHGLHP
Sbjct: 228 NIDCYSTDFCVRVRDGMRYWNMTVQWWLAQYIYKSAPARSYVLRSAWTMLLSAYWHGLHP 287

Query: 343 GQVFGFVCWAVMVEADYLIHS 363
           G    F+   + + A+  + S
Sbjct: 288 GYYLSFLTIPLCLAAEGRLES 308


>gi|10835169 solute carrier family 11 (proton-coupled divalent metal
           ion transporters), member 2 [Homo sapiens]
          Length = 561

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 4/98 (4%)

Query: 12  ISFYQGAAFPFALL--FNYLCIMDSFSTRARYLFLLTGGGALA--VAAMGSYAVLVFTPA 67
           ++  Q    PFAL+    +  +    S  A  L     GG L   + ++  Y V+V+   
Sbjct: 442 LNVLQSLQLPFALIPILTFTSLRPVMSDFANGLGWRIAGGILVLIICSINMYFVVVYVRD 501

Query: 68  VCAVALLCSLAPQQVHRWTFCFQMSWQTLCHLGLHYTE 105
           +  VAL    A   V    F F + WQ L  LG+ + +
Sbjct: 502 LGHVALYVVAAVVSVAYLGFVFYLGWQCLIALGMSFLD 539


>gi|34452721 GA binding protein transcription factor, alpha subunit
           [Homo sapiens]
          Length = 454

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 13/135 (9%)

Query: 273 PELGQSPGEEGYVPDADIWTLERTHRISVFSRKWNQSTARWLRRLVFQHSRAWPLLQTFA 332
           P+   +  E   V +A + TL+ T  I+  S + ++   RW   L         L   + 
Sbjct: 126 PDAHHAESEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYD 185

Query: 333 FSAWWHGLHPGQVFGFVCWAV----MVEADYLIHSFANEFIRSWPMRLFYR-----TLTW 383
              W       QV  +V W +    M + D    + +   + S     F++      + W
Sbjct: 186 PIQW----STDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEILW 241

Query: 384 AHTQLIIAYIMLAVE 398
           +H +L+  Y++ + E
Sbjct: 242 SHLELLRKYVLASQE 256


>gi|4885327 free fatty acid receptor 1 [Homo sapiens]
          Length = 300

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 7/63 (11%)

Query: 39  ARYLFLLTGGGALAVAAMGSYAVLVFTPAVCAVALLCSLAPQQVHRWTFCFQMSWQTLCH 98
           A +  L  GGG LA  + G Y    F     A    C       + W  C  +    LCH
Sbjct: 85  AHFFPLYAGGGFLAALSAGRYLGAAFPLGYQAFRRPC-------YSWGVCAAIWALVLCH 137

Query: 99  LGL 101
           LGL
Sbjct: 138 LGL 140


>gi|21389515 ring finger protein 145 [Homo sapiens]
          Length = 691

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 45/205 (21%), Positives = 74/205 (36%), Gaps = 47/205 (22%)

Query: 4   LWLFFLHPISFYQGAAFPFAL-LFNYLCIMDSFSTRARYLFLLTGGGALAVAAMGSYAVL 62
           LW   + P+ F       FAL +++Y    D  ++R R LFL     A   +   S   L
Sbjct: 249 LWNQLVVPVLFMVFWLVLFALQIYSYFSTRDQPASRERLLFLFLTSIAECCSTPYSLLGL 308

Query: 63  VFTPAVCAVALLCSLAPQQVHRWTFCFQMSWQTLCHLGLHYTEYYLHEPPSVRFCITLSS 122
           VFT +  A+ +L                    TLC   L     ++++P   R      +
Sbjct: 309 VFTVSFVALGVL--------------------TLCKFYLQGYRAFMNDPAMNRGMTEGVT 348

Query: 123 LMLLTQRVTSLSLDICE------------------------GKVKAASGGFRSRSSLSEH 158
           L++L  +   + L +                            +  A G  R + SL +H
Sbjct: 349 LLILAVQTGLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDK-SLWKH 407

Query: 159 VCKALPYFSYLLFFPALLGGSLCSF 183
             +A+    +LL FPA +   +C F
Sbjct: 408 F-RAVSLCLFLLVFPAYMAYMICQF 431


>gi|25777748 piggyBac transposable element derived 5 [Homo sapiens]
          Length = 554

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 118 ITLSSLMLLTQRVTSLSLDICEGKVKAASGGFRSRSSLSEHVCKA-----LPYFSYLLFF 172
           +TL+ +      + S S+  CE  +   SGGF S  SL+  + +A     L YF  + F 
Sbjct: 192 VTLTEMKAFLGYMISTSISHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFR 251

Query: 173 PALLGGSLCSFQRFQARVQGS--SALHP 198
            +     L   Q F   +Q S  SA  P
Sbjct: 252 SSQTTHGLYKVQPFLDSLQNSFDSAFRP 279


>gi|55953106 phospholipase A2 receptor 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1324

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 6/41 (14%)

Query: 349 VCWAVMVEADYLIHSFANEFIRSWPMRLFYRTLTWAHTQLI 389
           V W    +A+YL H+FA+E++       F    +W H+ L+
Sbjct: 814 VPWLFYQDAEYLFHTFASEWLN------FEFVCSWLHSDLL 848


>gi|55953104 phospholipase A2 receptor 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1463

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 6/41 (14%)

Query: 349 VCWAVMVEADYLIHSFANEFIRSWPMRLFYRTLTWAHTQLI 389
           V W    +A+YL H+FA+E++       F    +W H+ L+
Sbjct: 814 VPWLFYQDAEYLFHTFASEWLN------FEFVCSWLHSDLL 848


>gi|8923477 transmembrane protein 160 [Homo sapiens]
          Length = 188

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 268 AAGFGPELGQSPGEEGYVPDADIWTLERTHRISVFS 303
           A G GP  G SP     +  AD W L + H  +  S
Sbjct: 38  APGHGPRAGASPPPVSELDRADAWLLRKAHETAFLS 73


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.139    0.476 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,107,925
Number of Sequences: 37866
Number of extensions: 728682
Number of successful extensions: 1802
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1771
Number of HSP's gapped (non-prelim): 23
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press