NPHP1 10454

Name: NPHP1	Sequence: fasta or formatted (677aa)		NCBI GI: 189491776
Description: nephrocystin 1 isoform 3		Referenced in: Kidney Non-Receptor Tyrosine Kinase Pathways
Other entries for this name: alt prot [732aa] nephrocystin 1 isoform 2 alt prot [614aa] nephrocystin 1 isoform 4 alt prot [733aa] nephrocystin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 38 1 C cysteine 1.2 8 1 D aspartate 5.3 36 1 E glutamate 10.8 73 6 F phenylalanine 3.2 22 1 G glycine 5.5 37 2 H histidine 1.8 12 1 I isoleucine 4.9 33 1 K lysine 5.5 37 2 L leucine 12.0 81 2 M methionine 2.1 14 1 N asparagine 3.4 23 1 P proline 5.0 34 2 Q glutamine 5.8 39 2 R arginine 6.2 42 3 S serine 8.0 54 2 T threonine 5.5 37 2 V valine 4.7 32 1 W tryptophan 1.8 12 2 Y tyrosine 1.9 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nephrocystin 1 isoform 3 NPHP1 0.940 nephrocystin 1 isoform 1 NPHP1 0.927 nephrocystin 1 isoform 2 NPHP1 0.865 nephrocystin 1 isoform 4 CDC2L1 0.028 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.028 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.028 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.028 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L2 0.026 cell division cycle 2-like 2 isoform 4 CDC2L2 0.026 cell division cycle 2-like 2 isoform 1 CDC2L1 0.025 cell division cycle 2-like 1 (PITSLRE proteins) isof... ITSN2 0.024 intersectin 2 isoform 3 ITSN2 0.024 intersectin 2 isoform 1 ITSN2 0.024 intersectin 2 isoform 2 TRIP10 0.023 thyroid hormone receptor interactor 10 RPGR 0.023 retinitis pigmentosa GTPase regulator isoform C [Hom... CRK 0.023 v-crk sarcoma virus CT10 oncogene homolog isoform a ... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CRK 0.022 v-crk sarcoma virus CT10 oncogene homolog isoform b ... ABI2 0.022 abl interactor 2 CRKL 0.021 v-crk sarcoma virus CT10 oncogene homolog (avian)-lik... CENPB 0.021 centromere protein B MYT1 0.021 myelin transcription factor 1 SH3PXD2A 0.020 SH3 multiple domains 1 FNBP1L 0.020 formin binding protein 1-like isoform 1 FNBP1L 0.020 formin binding protein 1-like isoform 2 HUWE1 0.020 HECT, UBA and WWE domain containing 1 TTBK1 0.020 tau tubulin kinase 1 PSTPIP1 0.019 proline-serine-threonine phosphatase interacting pro... LOC645202 0.019 PREDICTED: hypothetical protein LOC645202 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.