Guide to the Human Genome
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Name: CRY2 Sequence: fasta or formatted (614aa) NCBI GI: 188536100
Description:

cryptochrome 2 (photolyase-like) isoform 1

Referenced in:

Circadian Rhythms

Other entries for this name:
alt prot [532aa] cryptochrome 2 (photolyase-like) isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         61           3
 C cysteine            2.1         13           1
 D aspartate           4.1         25           1
 E glutamate           6.7         41           2
 F phenylalanine       4.2         26           2
 G glycine             6.7         41           2
 H histidine           2.0         12           2
 I isoleucine          3.6         22           2
 K lysine              4.2         26           2
 L leucine             9.8         60           3
 M methionine          2.0         12           1
 N asparagine          2.9         18           2
 P proline             7.5         46           2
 Q glutamine           3.1         19           2
 R arginine            7.8         48           2
 S serine              7.3         45           3
 T threonine           3.9         24           1
 V valine              6.0         37           2
 W tryptophan          2.9         18           1
 Y tyrosine            3.3         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cryptochrome 2 (photolyase-like) isoform 1 
CRY2                  0.847   cryptochrome 2 (photolyase-like) isoform 2 
CRY1                  0.695   cryptochrome 1 (photolyase-like) 
NCAN                  0.010   chondroitin sulfate proteoglycan 3 
PCLO                  0.008   piccolo isoform 2 
PCLO                  0.008   piccolo isoform 1 
SYDE1                 0.008   synapse defective 1, Rho GTPase, homolog 1 
CIC                   0.008   capicua homolog 
MARCH11               0.007   membrane-associated ring finger (C3HC4) 11 
KIAA0754              0.006   hypothetical protein LOC643314 
SRRM2                 0.006   splicing coactivator subunit SRm300 
PLIN                  0.006   perilipin 
PLIN                  0.006   perilipin 
MUC20                 0.006   mucin 20 isoform S 
MUC20                 0.006   mucin 20 isoform L 
TMEM67                0.006   meckelin isoform 1 
ZMYM3                 0.006   zinc finger protein 261 
ZMYM3                 0.006   zinc finger protein 261 
UBE4B                 0.006   ubiquitination factor E4B isoform 1 
ADAMTS14              0.006   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.006   ADAM metallopeptidase with thrombospondin type 1 mo...
MYBPH                 0.006   myosin binding protein H 
WASF1                 0.005   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.005   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.005   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.005   Wiskott-Aldrich syndrome protein family member 1 [Hom...
LOC390595             0.005   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.005   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.005   PREDICTED: hypothetical protein 
DGKK                  0.005   diacylglycerol kinase kappa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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