CIRH1A 9979

Name: CIRH1A	Sequence: fasta or formatted (686aa)		NCBI GI: 186928847
Description: cirhin		Referenced in: Nucleus and Nucleolus WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 51 2 C cysteine 1.7 12 1 D aspartate 5.1 35 2 E glutamate 3.5 24 1 F phenylalanine 5.5 38 2 G glycine 5.5 38 2 H histidine 4.5 31 2 I isoleucine 6.0 41 2 K lysine 6.0 41 4 L leucine 9.2 63 3 M methionine 1.9 13 1 N asparagine 3.9 27 2 P proline 5.0 34 3 Q glutamine 4.4 30 2 R arginine 4.5 31 3 S serine 8.7 60 2 T threonine 5.5 38 1 V valine 7.1 49 2 W tryptophan 1.6 11 1 Y tyrosine 2.8 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cirhin WDR61 0.024 WD repeat domain 61 SNRNP40 0.023 WD repeat domain 57 (U5 snRNP specific) WDR82 0.018 WD repeat domain 82 TBL3 0.018 transducin beta-like 3 TAF5 0.017 TBP-associated factor 5 TLE4 0.017 transducin-like enhancer protein 4 EML5 0.017 echinoderm microtubule associated protein like 5 [Ho... KATNB1 0.016 katanin p80 subunit B 1 WDFY2 0.016 WD repeat and FYVE domain containing 2 WDR3 0.015 WD repeat-containing protein 3 TLE1 0.015 transducin-like enhancer protein 1 WDR31 0.015 WD repeat domain 31 isoform 1 WDR31 0.015 WD repeat domain 31 isoform 3 TAF5L 0.015 PCAF associated factor 65 beta isoform a MAPKBP1 0.014 mitogen-activated protein kinase binding protein 1 ... MAPKBP1 0.014 mitogen-activated protein kinase binding protein 1 ... STRN4 0.014 zinedin isoform 2 STRN4 0.014 zinedin isoform 1 TLE3 0.014 transducin-like enhancer protein 3 isoform b TLE3 0.014 transducin-like enhancer protein 3 isoform c TLE3 0.014 transducin-like enhancer protein 3 isoform a FBXW7 0.014 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.014 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.014 F-box and WD repeat domain containing 7 isoform 2 [H... STRN 0.013 striatin, calmodulin binding protein TRAF7 0.012 TNF receptor-associated factor 7 WDHD1 0.012 WD repeat and HMG-box DNA binding protein 1 isoform 1... WIPI2 0.012 WD repeat domain, phosphoinositide interacting 2 iso... WIPI2 0.012 WD repeat domain, phosphoinositide interacting 2 iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.