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Search of human proteins with 18390347
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18390347 ATR interacting protein isoform 1 [Homo sapiens]
(791 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18390347 ATR interacting protein isoform 1 [Homo sapiens] 1578 0.0
gi|18390344 ATR interacting protein isoform 2 [Homo sapiens] 1507 0.0
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 47 9e-05
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 47 9e-05
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 47 9e-05
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 47 9e-05
gi|4505257 moesin [Homo sapiens] 47 9e-05
gi|31542634 filamin A interacting protein 1 [Homo sapiens] 45 3e-04
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 44 4e-04
gi|197313707 5-azacytidine induced 2 isoform c [Homo sapiens] 44 4e-04
gi|197313705 5-azacytidine induced 2 isoform b [Homo sapiens] 44 4e-04
gi|11968003 5-azacytidine induced 2 isoform a [Homo sapiens] 44 4e-04
gi|42794779 myosin 18A isoform b [Homo sapiens] 44 6e-04
gi|28416946 myosin 18A isoform a [Homo sapiens] 44 6e-04
gi|191252814 RIMS binding protein 3B [Homo sapiens] 44 8e-04
gi|191252806 RIMS binding protein 3C [Homo sapiens] 44 8e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 44 8e-04
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 43 0.001
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 43 0.001
gi|154090997 coiled-coil domain containing 13 [Homo sapiens] 43 0.001
gi|34577114 cytomatrix protein p110 [Homo sapiens] 43 0.001
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 43 0.001
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|154277120 spectrin repeat containing, nuclear envelope 1 isof... 42 0.002
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 42 0.002
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 42 0.002
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 42 0.002
gi|73476377 LBXCOR1 homolog [Homo sapiens] 42 0.002
>gi|18390347 ATR interacting protein isoform 1 [Homo sapiens]
Length = 791
Score = 1578 bits (4087), Expect = 0.0
Identities = 791/791 (100%), Positives = 791/791 (100%)
Query: 1 MAGTSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFTADDL 60
MAGTSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFTADDL
Sbjct: 1 MAGTSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFTADDL 60
Query: 61 EELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQ 120
EELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQ
Sbjct: 61 EELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQ 120
Query: 121 YKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKE 180
YKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKE
Sbjct: 121 YKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKE 180
Query: 181 FSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVVIKPEACSP 240
FSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVVIKPEACSP
Sbjct: 181 FSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVVIKPEACSP 240
Query: 241 QFGKTSFPTKESFSANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIKQEEAQKSFVDS 300
QFGKTSFPTKESFSANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIKQEEAQKSFVDS
Sbjct: 241 QFGKTSFPTKESFSANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIKQEEAQKSFVDS 300
Query: 301 WRQRSNTQGSILINLLLKQPLIPGSSLSLCHLLSSSSESPAGTPLQPPGFGSTLAGMSGL 360
WRQRSNTQGSILINLLLKQPLIPGSSLSLCHLLSSSSESPAGTPLQPPGFGSTLAGMSGL
Sbjct: 301 WRQRSNTQGSILINLLLKQPLIPGSSLSLCHLLSSSSESPAGTPLQPPGFGSTLAGMSGL 360
Query: 361 RTTGSYDGSFSLSALREAQNLAFTGLNLVARNECSRDGDPAEGGRRAFPLCQLPGAVHFL 420
RTTGSYDGSFSLSALREAQNLAFTGLNLVARNECSRDGDPAEGGRRAFPLCQLPGAVHFL
Sbjct: 361 RTTGSYDGSFSLSALREAQNLAFTGLNLVARNECSRDGDPAEGGRRAFPLCQLPGAVHFL 420
Query: 421 PLVQFFIGLHCQALQDLAAAKRSGAPGDSPTHSSCVSSGVETNPEDSVCILEGFSVTALS 480
PLVQFFIGLHCQALQDLAAAKRSGAPGDSPTHSSCVSSGVETNPEDSVCILEGFSVTALS
Sbjct: 421 PLVQFFIGLHCQALQDLAAAKRSGAPGDSPTHSSCVSSGVETNPEDSVCILEGFSVTALS 480
Query: 481 ILQHLVCHSGAVVSLLLSGVGADSAAGEGNRSLVHRLSDGDMTSALRGVADDQGQHPLLK 540
ILQHLVCHSGAVVSLLLSGVGADSAAGEGNRSLVHRLSDGDMTSALRGVADDQGQHPLLK
Sbjct: 481 ILQHLVCHSGAVVSLLLSGVGADSAAGEGNRSLVHRLSDGDMTSALRGVADDQGQHPLLK 540
Query: 541 MLLHLLAFSSAATGHLQASVLTQCLKVLVKLAENTSCDFLPRFQCVFQVLPKCLSPETPL 600
MLLHLLAFSSAATGHLQASVLTQCLKVLVKLAENTSCDFLPRFQCVFQVLPKCLSPETPL
Sbjct: 541 MLLHLLAFSSAATGHLQASVLTQCLKVLVKLAENTSCDFLPRFQCVFQVLPKCLSPETPL 600
Query: 601 PSVLLAVELLSLLADHDQLAPQLCSHSEGCLLLLLYMYITSRPDRVALETQWLQLEQEVV 660
PSVLLAVELLSLLADHDQLAPQLCSHSEGCLLLLLYMYITSRPDRVALETQWLQLEQEVV
Sbjct: 601 PSVLLAVELLSLLADHDQLAPQLCSHSEGCLLLLLYMYITSRPDRVALETQWLQLEQEVV 660
Query: 661 WLLAKLGVQSPLPPVTGSNCQCNVEVVRALTVMLHRQWLTVRRAGGPPRTDQQRRTVRCL 720
WLLAKLGVQSPLPPVTGSNCQCNVEVVRALTVMLHRQWLTVRRAGGPPRTDQQRRTVRCL
Sbjct: 661 WLLAKLGVQSPLPPVTGSNCQCNVEVVRALTVMLHRQWLTVRRAGGPPRTDQQRRTVRCL 720
Query: 721 RDTVLLLHGLSQKDKLFMMHCVEVLHQFDQVMPGVSMLIRGLPDVTDCEEAALDDLCAAE 780
RDTVLLLHGLSQKDKLFMMHCVEVLHQFDQVMPGVSMLIRGLPDVTDCEEAALDDLCAAE
Sbjct: 721 RDTVLLLHGLSQKDKLFMMHCVEVLHQFDQVMPGVSMLIRGLPDVTDCEEAALDDLCAAE 780
Query: 781 TDVEDPEVECG 791
TDVEDPEVECG
Sbjct: 781 TDVEDPEVECG 791
>gi|18390344 ATR interacting protein isoform 2 [Homo sapiens]
Length = 764
Score = 1507 bits (3902), Expect = 0.0
Identities = 764/791 (96%), Positives = 764/791 (96%), Gaps = 27/791 (3%)
Query: 1 MAGTSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFTADDL 60
MAGTSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFTADDL
Sbjct: 1 MAGTSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFTADDL 60
Query: 61 EELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQ 120
EELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQ
Sbjct: 61 EELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQ 120
Query: 121 YKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKE 180
YKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKE
Sbjct: 121 YKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKE 180
Query: 181 FSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVVIKPEACSP 240
FSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVVIKPEACSP
Sbjct: 181 FSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVVIKPEACSP 240
Query: 241 QFGKTSFPTKESFSANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIKQEEAQKSFVDS 300
QFGKTSFPTKESFSANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIKQEEAQKSFVDS
Sbjct: 241 QFGKTSFPTKESFSANMSLPHPCQTESGYKPLVGREDSKPHSLRGDSIKQEEAQKSFVDS 300
Query: 301 WRQRSNTQGSILINLLLKQPLIPGSSLSLCHLLSSSSESPAGTPLQPPGFGSTLAGMSGL 360
WRQRSNTQGSILINLLLKQPLIPGSSLSLCHLLSSSSESPAGTPLQPPGFGSTLAGMSGL
Sbjct: 301 WRQRSNTQGSILINLLLKQPLIPGSSLSLCHLLSSSSESPAGTPLQPPGFGSTLAGMSGL 360
Query: 361 RTTGSYDGSFSLSALREAQNLAFTGLNLVARNECSRDGDPAEGGRRAFPLCQLPGAVHFL 420
RTTGSYDGSFSLSALREAQNLAFTGLNLVARNECSRDGDPAEGGRRAFPLCQLPGAVHFL
Sbjct: 361 RTTGSYDGSFSLSALREAQNLAFTGLNLVARNECSRDGDPAEGGRRAFPLCQLPGAVHFL 420
Query: 421 PLVQFFIGLHCQALQDLAAAKRSGAPGDSPTHSSCVSSGVETNPEDSVCILEGFSVTALS 480
PLVQFFIGLHCQALQDLAAAKRSGAPGDSPTHSSCVSSGVETNPEDSVCILEGFSVTALS
Sbjct: 421 PLVQFFIGLHCQALQDLAAAKRSGAPGDSPTHSSCVSSGVETNPEDSVCILEGFSVTALS 480
Query: 481 ILQHLVCHSGAVVSLLLSGVGADSAAGEGNRSLVHRLSDGDMTSALRGVADDQGQHPLLK 540
ILQHLVCHSGAVVSLLLSGVGADSAAGEGNRSLVHRLSDGDMTSALRGVADDQGQHPLLK
Sbjct: 481 ILQHLVCHSGAVVSLLLSGVGADSAAGEGNRSLVHRLSDGDMTSALRGVADDQGQHPLLK 540
Query: 541 MLLHLLAFSSAATGHLQASVLTQCLKVLVKLAENTSCDFLPRFQCVFQVLPKCLSPETPL 600
MLLHLLAFSSAATGHLQASVLTQCLKVLVKLAENTSCDFLPRFQCVFQVLPKCLSPETPL
Sbjct: 541 MLLHLLAFSSAATGHLQASVLTQCLKVLVKLAENTSCDFLPRFQCVFQVLPKCLSPETPL 600
Query: 601 PSVLLAVELLSLLADHDQLAPQLCSHSEGCLLLLLYMYITSRPDRVALETQWLQLEQEVV 660
PSVLLAVELLSLLADHDQLAPQLCSHSEGCLLLLLYMYITSRPDRVALETQWLQLEQ
Sbjct: 601 PSVLLAVELLSLLADHDQLAPQLCSHSEGCLLLLLYMYITSRPDRVALETQWLQLEQ--- 657
Query: 661 WLLAKLGVQSPLPPVTGSNCQCNVEVVRALTVMLHRQWLTVRRAGGPPRTDQQRRTVRCL 720
EVVRALTVMLHRQWLTVRRAGGPPRTDQQRRTVRCL
Sbjct: 658 ------------------------EVVRALTVMLHRQWLTVRRAGGPPRTDQQRRTVRCL 693
Query: 721 RDTVLLLHGLSQKDKLFMMHCVEVLHQFDQVMPGVSMLIRGLPDVTDCEEAALDDLCAAE 780
RDTVLLLHGLSQKDKLFMMHCVEVLHQFDQVMPGVSMLIRGLPDVTDCEEAALDDLCAAE
Sbjct: 694 RDTVLLLHGLSQKDKLFMMHCVEVLHQFDQVMPGVSMLIRGLPDVTDCEEAALDDLCAAE 753
Query: 781 TDVEDPEVECG 791
TDVEDPEVECG
Sbjct: 754 TDVEDPEVECG 764
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 46.6 bits (109), Expect = 9e-05
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQ 172
+LE + KELK+ +K+ EE+ N + +L L +E R E+TQ
Sbjct: 810 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADE-RIEKVQTRLEETQ 868
Query: 173 AL-SDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSER 211
AL KEKEF + + +LQ+++ +AE EL+ +L + +
Sbjct: 869 ALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSK 908
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 46.6 bits (109), Expect = 9e-05
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQ 172
+LE + KELK+ +K+ EE+ N + +L L +E R E+TQ
Sbjct: 924 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADE-RIEKVQTRLEETQ 982
Query: 173 AL-SDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSER 211
AL KEKEF + + +LQ+++ +AE EL+ +L + +
Sbjct: 983 ALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSK 1022
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 46.6 bits (109), Expect = 9e-05
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQ 172
+LE + KELK+ +K+ EE+ N + +L L +E R E+TQ
Sbjct: 810 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADE-RIEKVQTRLEETQ 868
Query: 173 AL-SDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSER 211
AL KEKEF + + +LQ+++ +AE EL+ +L + +
Sbjct: 869 ALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSK 908
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 46.6 bits (109), Expect = 9e-05
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQ 172
+LE + KELK+ +K+ EE+ N + +L L +E R E+TQ
Sbjct: 944 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADE-RIEKVQTRLEETQ 1002
Query: 173 AL-SDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSER 211
AL KEKEF + + +LQ+++ +AE EL+ +L + +
Sbjct: 1003 ALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSK 1042
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 46.6 bits (109), Expect = 9e-05
Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 125 KEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKEFSKK 184
KEK++ +EE++ + +K + + + + LEEQ R LEQE+ +A S+ EK ++
Sbjct: 337 KEKIEREKEELMER---LKQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKLAKER 393
Query: 185 LQSLQSELQFKDAEMNELRTKLQTS-ERANKLAAPSVSHVSPRKNPSVVIKPEACSPQFG 243
++ +++ A ++ +T+ Q + E A A S ++ +K S ++ + +
Sbjct: 394 QEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQQKAQMVQ 453
Query: 244 KTSFPTKESFSANMSLPH---PCQTESGYKPLVGREDSKPHSLRGDSIKQEEAQK 295
+ T+ MS PH P + E + G E S LR D++ ++ +++
Sbjct: 454 EDLEKTRAELKTAMSTPHVAEPAENEQDEQDENGAEASA--DLRADAMAKDRSEE 506
>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
Length = 1213
Score = 44.7 bits (104), Expect = 3e-04
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 113 ELEVLQAQYKEL--------KEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRR--- 161
ELEV++++ KEL K ++ + ++ +K+ + ++ + + E + +E+R+
Sbjct: 469 ELEVVKSRVKELECSESRLEKAELSLKDDLTKLKSFTVMLVDERKNMMEKIKQEERKVDG 528
Query: 162 --SHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFK----DAEMNELRTKLQTSERANKL 215
+F +EQ K +++K E SKKL L+SE++ K E +EL KL++ E +
Sbjct: 529 LNKNFKVEQGKVMDVTEKLIEESKKLLKLKSEMEEKVYNLTRERDELIGKLKSEEEKSSE 588
Query: 216 AAPSVSHVSPR 226
+ SV + R
Sbjct: 589 LSCSVDLLKKR 599
Score = 30.4 bits (67), Expect = 6.7
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 30/186 (16%)
Query: 58 DDLEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKN---PSGK-----------NR 103
DDL +L + + + + + R +DG++KN GK ++
Sbjct: 496 DDLTKLKSFTVMLVDERKNMMEKIKQEE---RKVDGLNKNFKVEQGKVMDVTEKLIEESK 552
Query: 104 ETVPIKDNFELEV--LQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRR 161
+ + +K E +V L + EL K+K EE+ + + +L+ L E V E R
Sbjct: 553 KLLKLKSEMEEKVYNLTRERDELIGKLKSEEEKSSELSCSVDLLKKRLDGIEEVEREITR 612
Query: 162 SHFLLEQEKTQALSDKEKEFS-------KKLQSL---QSELQFKDAEMNELRTKLQT-SE 210
E T +K KE + K+LQ L + +L + E ++L K +T +
Sbjct: 613 GRSRKGSELTCPEDNKIKELTLEIERLKKRLQQLEVVEGDLMKTEDEYDQLEQKFRTEQD 672
Query: 211 RANKLA 216
+AN L+
Sbjct: 673 KANFLS 678
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 44.3 bits (103), Expect = 4e-04
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 41/202 (20%)
Query: 60 LEELDTLASQALSQCPAAARDVSSDHKVHRLLDGM-------SKNPSGKNRETVPIKDNF 112
++EL +Q A S+ LL+ SK + +NR+ + KD+
Sbjct: 878 IQELQNEKETLATQLDLAETKAESEQLARGLLEEQYFELTQESKKAASRNRQEITDKDHT 937
Query: 113 -------------ELEVLQAQYKELKEKMKVMEEEV-LIKNGEIKILRDSLHQ---TESV 155
++E+L+ + +EL EKMK EEE L K EI L+ + + TE
Sbjct: 938 VSRLEEANSMLTKDIEILRRENEELTEKMKKAEEEYKLEKEEEISNLKAAFEKNINTERT 997
Query: 156 LEEQ---------RRSHFLLEQEK--TQALSDKEKEFSKKLQSLQSELQFKDAEMNELRT 204
L+ Q R F ++++K TQ L KEKE K LQ EL + + N++
Sbjct: 998 LKTQAVNKLAEIMNRKDFKIDRKKANTQDLRKKEKENRK----LQLELNQEREKFNQMVV 1053
Query: 205 KLQTSERANKLAAPSVSHVSPR 226
K Q + N + A V + R
Sbjct: 1054 KHQ--KELNDMQAQLVEECAHR 1073
Score = 37.7 bits (86), Expect = 0.042
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 33/240 (13%)
Query: 55 FTADDLEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFEL 114
F AD+L+ L+ Q ++ A R + + L ++K G + ++D E
Sbjct: 795 FEADNLKGLEKQMKQEINTLLEAKRLLEFE------LAQLTKQYRGNEGQMRELQDQLEA 848
Query: 115 E-----VLQAQYKELKEKMKVMEEEVLIK----NGEIKILRDSLHQTESVLEEQRRSHFL 165
E + + Q KELKE+++ E L K E + L L E+ E ++ + L
Sbjct: 849 EQYFSTLYKTQVKELKEEIEEKNRENLKKIQELQNEKETLATQLDLAETKAESEQLARGL 908
Query: 166 LEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSP 225
LE++ + + +K S+ Q E+ KD ++ L E AN + + +
Sbjct: 909 LEEQYFELTQESKKAASRNRQ----EITDKDHTVSRL-------EEANSMLTKDI-EILR 956
Query: 226 RKNPSVVIKPEACSPQF----GKTSFPTKESFSANMSLPHPCQTESGYK--PLVGREDSK 279
R+N + K + ++ + K +F N++ +T++ K ++ R+D K
Sbjct: 957 RENEELTEKMKKAEEEYKLEKEEEISNLKAAFEKNINTERTLKTQAVNKLAEIMNRKDFK 1016
Score = 32.3 bits (72), Expect = 1.8
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 111 NFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEK 170
N +L LQ Q +E + ++ + + + S+ Q ES+ E + + +LE K
Sbjct: 537 NEKLSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSK 596
Query: 171 T---------QALSDKEK----EFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAA 217
+ QA+ + E+ S+ + LQ+ + E+ L+ L+ E K A
Sbjct: 597 SQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQ 656
Query: 218 PSVSHVSPRKN 228
++H KN
Sbjct: 657 DMLNHSEKEKN 667
Score = 31.2 bits (69), Expect = 3.9
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 56 TADDLEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELE 115
TA L + T S+++SQ + R++ +++ +N ++ KD ++L+
Sbjct: 560 TAVRLRKSHTEMSKSISQLESLNRELQERNRIL------------ENSKSQTDKDYYQLQ 607
Query: 116 -VLQAQYKEL---KEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKT 171
+L+A+ ++ E + ++ + E+K L+ +L + E +E + E+EK
Sbjct: 608 AILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEK- 666
Query: 172 QALSDKEKEFSKKLQSLQSELQFKDAEMNE-------LRTKLQTSERANKLA 216
++ E + + KL+SLQ L + E+NE L K Q+ E A +A
Sbjct: 667 ---NNLEIDLNYKLKSLQQRL---EQEVNEHKVTKARLTDKHQSIEEAKSVA 712
>gi|197313707 5-azacytidine induced 2 isoform c [Homo sapiens]
Length = 232
Score = 44.3 bits (103), Expect = 4e-04
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 117 LQAQYKELKEKMKVMEEEVLIKNGEIKILRDSL-----HQTESVLEEQRRSHF------L 165
L Y+++K+++K E+E + I+ L + L +T SV EQ +
Sbjct: 41 LVTAYEDIKKRLKDSEKENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVC 100
Query: 166 LEQEKTQALSDK-EKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPS 219
++++ ++ DK K+ S+ L+ L +LQ K+ E+ +LRT+++T + L PS
Sbjct: 101 IDRDNLKSKLDKMNKDNSESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPS 155
>gi|197313705 5-azacytidine induced 2 isoform b [Homo sapiens]
Length = 243
Score = 44.3 bits (103), Expect = 4e-04
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 117 LQAQYKELKEKMKVMEEEVLIKNGEIKILRDSL-----HQTESVLEEQRRSHF------L 165
L Y+++K+++K E+E + I+ L + L +T SV EQ +
Sbjct: 41 LVTAYEDIKKRLKDSEKENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVC 100
Query: 166 LEQEKTQALSDK-EKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPS 219
++++ ++ DK K+ S+ L+ L +LQ K+ E+ +LRT+++T + L PS
Sbjct: 101 IDRDNLKSKLDKMNKDNSESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPS 155
>gi|11968003 5-azacytidine induced 2 isoform a [Homo sapiens]
Length = 392
Score = 44.3 bits (103), Expect = 4e-04
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 117 LQAQYKELKEKMKVMEEEVLIKNGEIKILRDSL-----HQTESVLEEQRRSHF------L 165
L Y+++K+++K E+E + I+ L + L +T SV EQ +
Sbjct: 41 LVTAYEDIKKRLKDSEKENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVC 100
Query: 166 LEQEKTQALSDK-EKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPS 219
++++ ++ DK K+ S+ L+ L +LQ K+ E+ +LRT+++T + L PS
Sbjct: 101 IDRDNLKSKLDKMNKDNSESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPS 155
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 43.9 bits (102), Expect = 6e-04
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 109 KDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQ 168
KD L ++ Q ++L+ K+K EEE+ + G I++L + + E +E R++H +
Sbjct: 1532 KDEASLAKVKKQLRDLEAKVKDQEEELDEQAGTIQMLEQAKLRLEMEMERMRQTHSKEME 1591
Query: 169 EKTQALSDKEKEFSKKLQSLQSEL--QFKD-----AEMNELRTKLQT-SERANK 214
+ + + + + KKL+ ++ +L +++D E EL KL T S++ N+
Sbjct: 1592 SRDEEVEEARQSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKLATLSDQVNR 1645
Score = 36.2 bits (82), Expect = 0.12
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQ 172
E++ LQ QY LK++M+VME EV+ E +++R + E V ++ + L+ E+
Sbjct: 1325 EMKELQTQYDALKKQMEVMEMEVM----EARLIRAAEINGE-VDDDDAGGEWRLKYER-- 1377
Query: 173 ALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPS 219
+ +E +F+KK LQ E F+D E + K Q R L A S
Sbjct: 1378 --AVREVDFTKK--RLQQE--FEDKLEVEQQNKRQLERRLGDLQADS 1418
Score = 32.7 bits (73), Expect = 1.3
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 26/121 (21%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQ 172
E+E L Q ++ + +EE++ E +++ L + + + E + H + ++
Sbjct: 1712 EIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASR 1771
Query: 173 ALS------------DKEK-EFSKKLQSLQSELQF-------------KDAEMNELRTKL 206
L+ +KEK E +KLQ+LQS+++F ++A++ EL T+L
Sbjct: 1772 DLAQINDLQAQLEEANKEKQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRL 1831
Query: 207 Q 207
+
Sbjct: 1832 E 1832
Score = 31.2 bits (69), Expect = 3.9
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 117 LQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSD 176
L+A+ +++ + E + +++ L + E L+EQ + +LEQ K +
Sbjct: 1519 LEAELQDISSQESKDEASLAKVKKQLRDLEAKVKDQEEELDEQAGTIQMLEQAKLRL--- 1575
Query: 177 KEKEFSKKLQSLQSELQFKDAEMNELRTKLQ 207
E E + Q+ E++ +D E+ E R Q
Sbjct: 1576 -EMEMERMRQTHSKEMESRDEEVEEARQSCQ 1605
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 43.9 bits (102), Expect = 6e-04
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 109 KDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQ 168
KD L ++ Q ++L+ K+K EEE+ + G I++L + + E +E R++H +
Sbjct: 1532 KDEASLAKVKKQLRDLEAKVKDQEEELDEQAGTIQMLEQAKLRLEMEMERMRQTHSKEME 1591
Query: 169 EKTQALSDKEKEFSKKLQSLQSEL--QFKD-----AEMNELRTKLQT-SERANK 214
+ + + + + KKL+ ++ +L +++D E EL KL T S++ N+
Sbjct: 1592 SRDEEVEEARQSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKLATLSDQVNR 1645
Score = 36.2 bits (82), Expect = 0.12
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQ 172
E++ LQ QY LK++M+VME EV+ E +++R + E V ++ + L+ E+
Sbjct: 1325 EMKELQTQYDALKKQMEVMEMEVM----EARLIRAAEINGE-VDDDDAGGEWRLKYER-- 1377
Query: 173 ALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPS 219
+ +E +F+KK LQ E F+D E + K Q R L A S
Sbjct: 1378 --AVREVDFTKK--RLQQE--FEDKLEVEQQNKRQLERRLGDLQADS 1418
Score = 32.7 bits (73), Expect = 1.3
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 26/121 (21%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQ 172
E+E L Q ++ + +EE++ E +++ L + + + E + H + ++
Sbjct: 1712 EIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASR 1771
Query: 173 ALS------------DKEK-EFSKKLQSLQSELQF-------------KDAEMNELRTKL 206
L+ +KEK E +KLQ+LQS+++F ++A++ EL T+L
Sbjct: 1772 DLAQINDLQAQLEEANKEKQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRL 1831
Query: 207 Q 207
+
Sbjct: 1832 E 1832
Score = 31.2 bits (69), Expect = 3.9
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 117 LQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSD 176
L+A+ +++ + E + +++ L + E L+EQ + +LEQ K +
Sbjct: 1519 LEAELQDISSQESKDEASLAKVKKQLRDLEAKVKDQEEELDEQAGTIQMLEQAKLRL--- 1575
Query: 177 KEKEFSKKLQSLQSELQFKDAEMNELRTKLQ 207
E E + Q+ E++ +D E+ E R Q
Sbjct: 1576 -EMEMERMRQTHSKEMESRDEEVEEARQSCQ 1605
>gi|191252814 RIMS binding protein 3B [Homo sapiens]
Length = 1639
Score = 43.5 bits (101), Expect = 8e-04
Identities = 46/183 (25%), Positives = 71/183 (38%), Gaps = 41/183 (22%)
Query: 4 TSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAP-----DPDDPFGAHGDFTAD 58
TS PGS+R S PP+P P PPP + H RG + + P P H
Sbjct: 317 TSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGH-----H 371
Query: 59 DLEELDTLASQAL--------------SQCPAAARDVSSDHKVHRL------LDGMSKNP 98
+L +L+ L ++AL Q A +D KV RL L G+++
Sbjct: 372 ELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRL 431
Query: 99 SGKNRE-----------TVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRD 147
+ + RE +P + LE+ Q ++ + L K+ +I+ LR
Sbjct: 432 ADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQ 491
Query: 148 SLH 150
H
Sbjct: 492 ECH 494
>gi|191252806 RIMS binding protein 3C [Homo sapiens]
Length = 1639
Score = 43.5 bits (101), Expect = 8e-04
Identities = 46/183 (25%), Positives = 71/183 (38%), Gaps = 41/183 (22%)
Query: 4 TSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAP-----DPDDPFGAHGDFTAD 58
TS PGS+R S PP+P P PPP + H RG + + P P H
Sbjct: 317 TSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGH-----H 371
Query: 59 DLEELDTLASQAL--------------SQCPAAARDVSSDHKVHRL------LDGMSKNP 98
+L +L+ L ++AL Q A +D KV RL L G+++
Sbjct: 372 ELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRL 431
Query: 99 SGKNRE-----------TVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRD 147
+ + RE +P + LE+ Q ++ + L K+ +I+ LR
Sbjct: 432 ADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQ 491
Query: 148 SLH 150
H
Sbjct: 492 ECH 494
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 43.5 bits (101), Expect = 8e-04
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 5 SAPGSKRR-SEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDP--FGAHGDFTA 57
S PG K + PPAP P PPP G PP GF + P P P F H DF A
Sbjct: 308 SPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA 363
Score = 31.6 bits (70), Expect = 3.0
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 3 GTSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDP 48
G+ G KR S P P P G PP + GF+ AP P P
Sbjct: 283 GSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKP-GFAPPPAPPPPPP 327
Score = 30.4 bits (67), Expect = 6.7
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 15 PPAPRPGPPPGTGHPPSKRARGFSAAAAPDPD 46
PP P P PPPG PP A G A P D
Sbjct: 391 PPPPPPPPPPGPPPPPFTGADGQPAIPPPLSD 422
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 43.1 bits (100), Expect = 0.001
Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 60 LEELDTLASQALSQCPAAARDVSSD----HKVHRLLDGMSKNPSGKNRETVPIKDNFELE 115
LEE +T+ ++ Q A + + H + +LD + + ++ +++ +L
Sbjct: 531 LEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQE--QLR 588
Query: 116 VLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALS 175
+ Q LKE++K ++ + + + L ++L + E +E + E+EK + +
Sbjct: 589 DKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEID 648
Query: 176 DKEKEFS---KKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVV 232
+ +K+ +K+ LQ +L K+A + +L+ E A+ LA+ + S K +
Sbjct: 649 NYKKDLKDLKEKVSLLQGDLSEKEASLLDLK------EHASSLASSGLKKDSRLKTLEIA 702
Query: 233 I--KPEAC 238
+ K E C
Sbjct: 703 LEQKKEEC 710
Score = 34.3 bits (77), Expect = 0.46
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 86 KVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKIL 145
++HR + + K +TV + ++ ++ ++L+E++++++ + E +
Sbjct: 363 EMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEERE-- 420
Query: 146 RDSLHQTESVLEEQRRSHFLLEQEKTQALSDKE---KEFSKKLQSLQSE-------LQFK 195
+ + Q E + +EQ K + LS KE +E KK LQ+E L K
Sbjct: 421 -EEMKQMEVYRSHSKFMKNKVEQLKEE-LSSKEAQWEELKKKAAGLQAEIGQVKQELSRK 478
Query: 196 DAEMNELRTKLQT 208
D E+ L+TKL+T
Sbjct: 479 DTELLALQTKLET 491
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 43.1 bits (100), Expect = 0.001
Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 60 LEELDTLASQALSQCPAAARDVSSD----HKVHRLLDGMSKNPSGKNRETVPIKDNFELE 115
LEE +T+ ++ Q A + + H + +LD + + ++ +++ +L
Sbjct: 503 LEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQE--QLR 560
Query: 116 VLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALS 175
+ Q LKE++K ++ + + + L ++L + E +E + E+EK + +
Sbjct: 561 DKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEID 620
Query: 176 DKEKEFS---KKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVV 232
+ +K+ +K+ LQ +L K+A + +L+ E A+ LA+ + S K +
Sbjct: 621 NYKKDLKDLKEKVSLLQGDLSEKEASLLDLK------EHASSLASSGLKKDSRLKTLEIA 674
Query: 233 I--KPEAC 238
+ K E C
Sbjct: 675 LEQKKEEC 682
Score = 34.7 bits (78), Expect = 0.35
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 127 KMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKE------KE 180
K K ++ + +K+ +I + L E ++ + + L +E+ + + E K
Sbjct: 376 KTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKF 435
Query: 181 FSKKLQSLQSELQFKDAEMNELRTKLQT 208
K+ ++ EL KD E+ L+TKL+T
Sbjct: 436 MKNKIGQVKQELSRKDTELLALQTKLET 463
>gi|154090997 coiled-coil domain containing 13 [Homo sapiens]
Length = 715
Score = 43.1 bits (100), Expect = 0.001
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 60 LEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKN-----PSGKNRETVPIKDNFEL 114
++EL+ QA SQ A D S + R L KN + ++ K E
Sbjct: 276 VQELEKQLGQARSQSAGTASDELSVYPDPRKLSAQEKNLLRIRSLEREKQEGLEKLASER 335
Query: 115 EVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQAL 174
+VLQ + +ELK+K + M + + E+K L+ Q +++E+ R + E AL
Sbjct: 336 DVLQRELEELKKKFEGMRSRNKLLSSEMKTLKS---QMGTLVEKGRH-----DDELIDAL 387
Query: 175 SDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQT-SERANKLAAPSVSHVSPRK 227
D+ K+ + L SL + + + L +L + ++R+N L A + V+ R+
Sbjct: 388 MDQLKQLQEILGSLSLQEEKTRVSQHHLDQQLNSEAQRSNSLVAQLQAMVAERE 441
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 120 QYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLE---EQRRSHFLLEQEKTQALSD 176
Q LK+++K ++ + + + L ++L + E ++E EQR E+ ++
Sbjct: 561 QLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRK 620
Query: 177 KEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSVVI--K 234
+ K+ +K+ +LQ+EL K++ + +L+ E A+ LA+ + S K+ + I K
Sbjct: 621 ENKDLKEKVNALQAELTEKESSLIDLK------EHASSLASAGLKRDSKLKSLEIAIEQK 674
Query: 235 PEACS 239
E CS
Sbjct: 675 KEECS 679
Score = 35.4 bits (80), Expect = 0.21
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 101 KNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQR 160
K +E + +++ ++Q + K K ++ + +K+ +I L ++ E ++ +
Sbjct: 349 KEKENIHLREELHR---RSQLQPEPAKTKALQTVIEMKDTKIASLERNIRDLEDEIQMLK 405
Query: 161 RSHFLLEQEKTQALSDKE--KEFSK----KLQSLQSELQFKDAEMNELRTKLQTSERAN 213
+ L +++ + + E K SK K+ L+ EL K++E+ L+TKL+T N
Sbjct: 406 ANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQN 464
Score = 33.5 bits (75), Expect = 0.79
Identities = 22/93 (23%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 108 IKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLH-------QTESVLEEQR 160
++D+ L+ LQAQ KEL+ + ++ +E+ IK+ ++ +S+ + E VL ++
Sbjct: 142 VRDSTMLD-LQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEE 200
Query: 161 RSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQ 193
+ + +E+ + ++ + +Q+LQ EL+
Sbjct: 201 AARMSVLKEQMRVSHEENQHLQLTIQALQDELR 233
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 42.7 bits (99), Expect = 0.001
Identities = 54/273 (19%), Positives = 103/273 (37%), Gaps = 19/273 (6%)
Query: 4 TSAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAAPDPDDPFGAHGDFT-ADDLEE 62
++AP S S P+P P PP P + P P P D EE
Sbjct: 539 SAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREE 598
Query: 63 LDTLASQALSQCPAAARDVSSDHKVHRLLD-GMSKNPSGKNRETVPIKDNFELEVLQAQY 121
L ++ Q + ++ D M + + E + E E + +
Sbjct: 599 ATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLAREAEA---RAEREAEARRREE 655
Query: 122 KELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEKEF 181
+E +EK + +EE + L+ + E+ E+ L ++ Q + +E
Sbjct: 656 QEAREKAQAEQEEQ-------ERLQKQKEEAEARSREEAERQRLEREKHFQQQEQERQER 708
Query: 182 SKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSVSHVSPRKNPSV---VIKPEAC 238
K+L+ + + + +E++E + K + E ++P ++P + ++ E
Sbjct: 709 RKRLEEIMK--RTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPGLQKEAVQKEEP 766
Query: 239 SPQFGKTSFPTKE--SFSANMSLPHPCQTESGY 269
PQ + S P+KE + N P P E+G+
Sbjct: 767 IPQEPQWSLPSKELPASLVNGLQPLPAHQENGF 799
Score = 35.8 bits (81), Expect = 0.16
Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 35/213 (16%)
Query: 3 GTSAPGSKRRSEPPAPRPGP------------------PPGTGHPPSKRARGFSAAAAPD 44
G AP + PP PRP P PP T PP+ + S +
Sbjct: 10 GAGAPPAVVARTPPEPRPSPEGDPSPPPPPMSALVPDTPPDT--PPAMKNATSSKQLPLE 67
Query: 45 PDDPFGAHGDFTADDLEELDTLASQALSQCPAA-----ARDVSSDHKVHRLLDGMSKNPS 99
P+ P G G A EE + +++ P A AR + S +P
Sbjct: 68 PESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDSPP 127
Query: 100 GKNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEV-LIKNGEIKILRD-SLHQTESVLE 157
K +K E L + +E + K ++ V L K + K LR+ L + LE
Sbjct: 128 TKQE----VKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLE 183
Query: 158 EQR----RSHFLLEQEKTQALSDKEKEFSKKLQ 186
EQR + LE+ + Q L ++ + +Q
Sbjct: 184 EQRLKAEQRRAALEERQRQKLEKNKERYEAAIQ 216
>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 42.4 bits (98), Expect = 0.002
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLE----- 167
EL+ LQ + ++KE + V + N EI L +S+ E + E ++ +LE
Sbjct: 261 ELDKLQTKMSKIKETVTVSAAVLSDHNLEIARLHESIRYWEQEVSELKKDLAILEAKLCF 320
Query: 168 ----QEKTQALSDKEK-EFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKL 215
+EK +S+ EK EF K++ L L E +LR K++T R K+
Sbjct: 321 FTDNKEKLDDISNDEKNEFLNKIKQLVETLHAARMEYKDLREKMKTLARQYKI 373
Score = 34.3 bits (77), Expect = 0.46
Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 101 KNRETVPIKDNFELEVLQAQYKELKEKMKVMEE--EVLIKNGEIKILRDSLHQTESVLEE 158
K E F L + Q K+ + + E ++ +K +I + + + + E ++E+
Sbjct: 166 KQEELARKHARFVLSLNQTMEKKATTTVYINETYTKINLKREDIALQKKCIQEAEELMEK 225
Query: 159 QRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAP 218
+R + + +QE T ++ EF + + E K E+++L+TK+ + ++A
Sbjct: 226 ERAEYLIRKQELTAQIN----EFENTREVKRMETYQKKKELDKLQTKMSKIKETVTVSAA 281
Query: 219 SVS 221
+S
Sbjct: 282 VLS 284
>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 42.4 bits (98), Expect = 0.002
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLE----- 167
EL+ LQ + ++KE + V + N EI L +S+ E + E ++ +LE
Sbjct: 261 ELDKLQTKMSKIKETVTVSAAVLSDHNLEIARLHESIRYWEQEVSELKKDLAILEAKLCF 320
Query: 168 ----QEKTQALSDKEK-EFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKL 215
+EK +S+ EK EF K++ L L E +LR K++T R K+
Sbjct: 321 FTDNKEKLDDISNDEKNEFLNKIKQLVETLHAARMEYKDLREKMKTLARQYKI 373
Score = 34.3 bits (77), Expect = 0.46
Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 101 KNRETVPIKDNFELEVLQAQYKELKEKMKVMEE--EVLIKNGEIKILRDSLHQTESVLEE 158
K E F L + Q K+ + + E ++ +K +I + + + + E ++E+
Sbjct: 166 KQEELARKHARFVLSLNQTMEKKATTTVYINETYTKINLKREDIALQKKCIQEAEELMEK 225
Query: 159 QRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAP 218
+R + + +QE T ++ EF + + E K E+++L+TK+ + ++A
Sbjct: 226 ERAEYLIRKQELTAQIN----EFENTREVKRMETYQKKKELDKLQTKMSKIKETVTVSAA 281
Query: 219 SVS 221
+S
Sbjct: 282 VLS 284
>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 42.4 bits (98), Expect = 0.002
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 113 ELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLE----- 167
EL+ LQ + ++KE + V + N EI L +S+ E + E ++ +LE
Sbjct: 261 ELDKLQTKMSKIKETVTVSAAVLSDHNLEIARLHESIRYWEQEVSELKKDLAILEAKLCF 320
Query: 168 ----QEKTQALSDKEK-EFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKL 215
+EK +S+ EK EF K++ L L E +LR K++T R K+
Sbjct: 321 FTDNKEKLDDISNDEKNEFLNKIKQLVETLHAARMEYKDLREKMKTLARQYKI 373
Score = 34.3 bits (77), Expect = 0.46
Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 101 KNRETVPIKDNFELEVLQAQYKELKEKMKVMEE--EVLIKNGEIKILRDSLHQTESVLEE 158
K E F L + Q K+ + + E ++ +K +I + + + + E ++E+
Sbjct: 166 KQEELARKHARFVLSLNQTMEKKATTTVYINETYTKINLKREDIALQKKCIQEAEELMEK 225
Query: 159 QRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAP 218
+R + + +QE T ++ EF + + E K E+++L+TK+ + ++A
Sbjct: 226 ERAEYLIRKQELTAQIN----EFENTREVKRMETYQKKKELDKLQTKMSKIKETVTVSAA 281
Query: 219 SVS 221
+S
Sbjct: 282 VLS 284
>gi|154277120 spectrin repeat containing, nuclear envelope 1 isoform
3 [Homo sapiens]
Length = 982
Score = 42.4 bits (98), Expect = 0.002
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 60 LEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQA 119
LEE L AL QC H++ L M +N + E VPI N + E+LQ
Sbjct: 723 LEEWRGLLQDALMQCQGF-------HEMSHGLLLMLENIDRRKNEIVPIDSNLDAEILQD 775
Query: 120 QYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEK 179
+K+L + ++ E+L + L+D Q +L + L +EK + ++ K
Sbjct: 776 HHKQLMQ----IKHELLESQLRVASLQDMSCQ---LLVNAEGTDCLEAKEKVHVIGNRLK 828
Query: 180 EFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKL-AAPSVSHVSPRKNPSVVIKPEA- 237
K++ EL+ K +++ + L + A++L + SVS S R P+ P
Sbjct: 829 LLLKEVSRHIKELE-KLLDVSSSQQDLSSWSSADELDTSGSVSPTSGRSTPNRQKTPRGK 887
Query: 238 CS-PQFGKT-----SFPTKESFSANMSLPHPCQTESGY 269
CS Q G + S TK +++S P P ++ G+
Sbjct: 888 CSLSQPGPSVSSPHSRSTKGGSDSSLSEPGPGRSGRGF 925
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
[Homo sapiens]
Length = 3321
Score = 42.4 bits (98), Expect = 0.002
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 60 LEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQA 119
LEE L AL QC H++ L M +N + E VPI N + E+LQ
Sbjct: 3062 LEEWRGLLQDALMQCQGF-------HEMSHGLLLMLENIDRRKNEIVPIDSNLDAEILQD 3114
Query: 120 QYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEK 179
+K+L + ++ E+L + L+D Q +L + L +EK + ++ K
Sbjct: 3115 HHKQLMQ----IKHELLESQLRVASLQDMSCQ---LLVNAEGTDCLEAKEKVHVIGNRLK 3167
Query: 180 EFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKL-AAPSVSHVSPRKNPSVVIKPEA- 237
K++ EL+ K +++ + L + A++L + SVS S R P+ P
Sbjct: 3168 LLLKEVSRHIKELE-KLLDVSSSQQDLSSWSSADELDTSGSVSPTSGRSTPNRQKTPRGK 3226
Query: 238 CS-PQFGKT-----SFPTKESFSANMSLPHPCQTESGY 269
CS Q G + S TK +++S P P ++ G+
Sbjct: 3227 CSLSQPGPSVSSPHSRSTKGGSDSSLSEPGPGRSGRGF 3264
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 42.4 bits (98), Expect = 0.002
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 60 LEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQA 119
LEE L AL QC H++ L M +N + E VPI N + E+LQ
Sbjct: 8490 LEEWRGLLQDALMQCQGF-------HEMSHGLLLMLENIDRRKNEIVPIDSNLDAEILQD 8542
Query: 120 QYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEK 179
+K+L + ++ E+L + L+D Q +L + L +EK + ++ K
Sbjct: 8543 HHKQLMQ----IKHELLESQLRVASLQDMSCQ---LLVNAEGTDCLEAKEKVHVIGNRLK 8595
Query: 180 EFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKL-AAPSVSHVSPRKNPSVVIKPEA- 237
K++ EL+ K +++ + L + A++L + SVS S R P+ P
Sbjct: 8596 LLLKEVSRHIKELE-KLLDVSSSQQDLSSWSSADELDTSGSVSPTSGRSTPNRQKTPRGK 8654
Query: 238 CS-PQFGKT-----SFPTKESFSANMSLPHPCQTESGY 269
CS Q G + S TK +++S P P ++ G+
Sbjct: 8655 CSLSQPGPSVSSPHSRSTKGGSDSSLSEPGPGRSGRGF 8692
Score = 34.3 bits (77), Expect = 0.46
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 141 EIKILRDSL----HQTESVLEEQRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKD 196
EIK L+ L + L+ +R H LE Q + + K+F KKLQS Q+ +
Sbjct: 4063 EIKHLKSELWIYLQDADQQLQNMKRRHSELELNIAQNMVSQVKDFVKKLQSKQASVNTII 4122
Query: 197 AEMNELRTKLQTSE 210
++N+L K ++ E
Sbjct: 4123 EKVNKLTKKEESPE 4136
Score = 33.5 bits (75), Expect = 0.79
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 101 KNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQR 160
KN ET P +L+ ++A +L +K++ +E + G +K Q E + +
Sbjct: 2273 KNLETPP-----DLQFIEA---DLMQKLEHAKEITEVAKGTLKDFTAQSTQVEKFINDIT 2324
Query: 161 RSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSV 220
+E+ ++ E KK++ +Q ELQ + + ++ + L + R K + +
Sbjct: 2325 TWFTKVEESLMNCAQNETCEALKKVKDIQKELQSQQSNISSTQENLNSLCR--KYHSAEL 2382
Query: 221 SHVSPRKNPSVVIKPEACSPQFGKTSFPTKESFSANMS 258
+ R ++ K EA S KT +ES + S
Sbjct: 2383 ESLG-RAMTGLIKKHEAVSQLCSKTQASLQESLEKHFS 2419
Score = 33.1 bits (74), Expect = 1.0
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 120 QYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEK 179
QYKE+ +K EE++ + E++ + + TE++ E Q+ L Q+KT+ +S K++
Sbjct: 1243 QYKEI---VKNSLEELISGSKEVQEQAEKILDTENLFEAQQL--LLHHQQKTKRISAKKR 1297
Query: 180 EFSKKL-QSLQSELQFKDAEMNELRTKLQTS 209
+ +++ Q+ Q E D ELR KL+++
Sbjct: 1298 DVQQQIAQAQQGEGGLPDRGHEELR-KLEST 1327
Score = 31.6 bits (70), Expect = 3.0
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 87 VHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILR 146
+ ++ + +S++ +G+++ + + L L KEK K ++ +V + K
Sbjct: 3111 LQKIQEFLSESENGQHKLNMMLSKGELLSTLLT-----KEKAKGIQAKVTAAKEDWKNFH 3165
Query: 147 DSLHQTESVLEEQR--RSHFLLEQEKTQA-LSDKEK----------------EFSKKLQS 187
+LHQ ES LE + F + E Q LS EK +KLQS
Sbjct: 3166 SNLHQKESALENLKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQS 3225
Query: 188 LQSELQFKDAEMNELRTKLQ---TSERANKLAAPSVSHVS 224
+ E+ + ++N L+ K Q + A+K VS +S
Sbjct: 3226 VLEEIHCYEPQLNRLKEKAQQLWEGQAASKSFRHRVSQLS 3265
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 42.4 bits (98), Expect = 0.002
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 60 LEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQA 119
LEE L AL QC H++ L M +N + E VPI N + E+LQ
Sbjct: 8538 LEEWRGLLQDALMQCQGF-------HEMSHGLLLMLENIDRRKNEIVPIDSNLDAEILQD 8590
Query: 120 QYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEK 179
+K+L + ++ E+L + L+D Q +L + L +EK + ++ K
Sbjct: 8591 HHKQLMQ----IKHELLESQLRVASLQDMSCQ---LLVNAEGTDCLEAKEKVHVIGNRLK 8643
Query: 180 EFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKL-AAPSVSHVSPRKNPSVVIKPEA- 237
K++ EL+ K +++ + L + A++L + SVS S R P+ P
Sbjct: 8644 LLLKEVSRHIKELE-KLLDVSSSQQDLSSWSSADELDTSGSVSPTSGRSTPNRQKTPRGK 8702
Query: 238 CS-PQFGKT-----SFPTKESFSANMSLPHPCQTESGY 269
CS Q G + S TK +++S P P ++ G+
Sbjct: 8703 CSLSQPGPSVSSPHSRSTKGGSDSSLSEPGPGRSGRGF 8740
Score = 34.3 bits (77), Expect = 0.46
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 141 EIKILRDSL----HQTESVLEEQRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKD 196
EIK L+ L + L+ +R H LE Q + + K+F KKLQS Q+ +
Sbjct: 4134 EIKHLKSELWIYLQDADQQLQNMKRRHSELELNIAQNMVSQVKDFVKKLQSKQASVNTII 4193
Query: 197 AEMNELRTKLQTSE 210
++N+L K ++ E
Sbjct: 4194 EKVNKLTKKEESPE 4207
Score = 33.5 bits (75), Expect = 0.79
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 101 KNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQR 160
KN ET P +L+ ++A +L +K++ +E + G +K Q E + +
Sbjct: 2266 KNLETPP-----DLQFIEA---DLMQKLEHAKEITEVAKGTLKDFTAQSTQVEKFINDIT 2317
Query: 161 RSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERANKLAAPSV 220
+E+ ++ E KK++ +Q ELQ + + ++ + L + R K + +
Sbjct: 2318 TWFTKVEESLMNCAQNETCEALKKVKDIQKELQSQQSNISSTQENLNSLCR--KYHSAEL 2375
Query: 221 SHVSPRKNPSVVIKPEACSPQFGKTSFPTKESFSANMS 258
+ R ++ K EA S KT +ES + S
Sbjct: 2376 ESLG-RAMTGLIKKHEAVSQLCSKTQASLQESLEKHFS 2412
Score = 33.1 bits (74), Expect = 1.0
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 120 QYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKEK 179
QYKE+ +K EE++ + E++ + + TE++ E Q+ L Q+KT+ +S K++
Sbjct: 1236 QYKEI---VKNSLEELISGSKEVQEQAEKILDTENLFEAQQL--LLHHQQKTKRISAKKR 1290
Query: 180 EFSKKL-QSLQSELQFKDAEMNELRTKLQTS 209
+ +++ Q+ Q E D ELR KL+++
Sbjct: 1291 DVQQQIAQAQQGEGGLPDRGHEELR-KLEST 1320
Score = 31.6 bits (70), Expect = 3.0
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 87 VHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILR 146
+ ++ + +S++ +G+++ + + L L KEK K ++ +V + K
Sbjct: 3104 LQKIQEFLSESENGQHKLNMMLSKGELLSTLLT-----KEKAKGIQAKVTAAKEDWKNFH 3158
Query: 147 DSLHQTESVLEEQR--RSHFLLEQEKTQA-LSDKEK----------------EFSKKLQS 187
+LHQ ES LE + F + E Q LS EK +KLQS
Sbjct: 3159 SNLHQKESALENLKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQS 3218
Query: 188 LQSELQFKDAEMNELRTKLQ---TSERANKLAAPSVSHVS 224
+ E+ + ++N L+ K Q + A+K VS +S
Sbjct: 3219 VLEEIHCYEPQLNRLKEKAQQLWEGQAASKSFRHRVSQLS 3258
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 42.4 bits (98), Expect = 0.002
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 48/213 (22%)
Query: 5 SAPGSKRRSEPPAPRPGPPPGTGHPPSKRARGFSAAAA----------PDPDDPFGAHGD 54
S G EP P GP P P + SAA A P+ +P
Sbjct: 707 SGGGGYELREPCGPLGGPAPAKVFAPERDEHVKSAAVALGPAASYVCTPEAHEPDKEDNH 766
Query: 55 FTADDLEELDTLASQALSQCPAAAR----------DVSSDHKVHRLLDGMSKNPSGK--- 101
ADDLE + Q P+ A DV+ H V + ++ +++ K
Sbjct: 767 SPADDLETRKSYPDQRSISQPSPANTDRGEDGLTLDVTGTHLVEKDIENLAREELQKLLL 826
Query: 102 ---------NRETVPIKDNFELEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQT 152
RE +KDNF+ ++K ++ EE V +++I+RD+L
Sbjct: 827 EQMELRKKLEREFQSLKDNFQ--------DQMKRELAYREEMV----QQLQIVRDTLC-- 872
Query: 153 ESVLEEQRRSHFLLEQEKTQALSDKEKEFSKKL 185
+ L+++R++ + ++Q+ +A D FS K+
Sbjct: 873 -NELDQERKARYAIQQKLKEA-HDALHHFSCKM 903
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,603,466
Number of Sequences: 37866
Number of extensions: 1794118
Number of successful extensions: 16065
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 578
Number of HSP's that attempted gapping in prelim test: 13635
Number of HSP's gapped (non-prelim): 2720
length of query: 791
length of database: 18,247,518
effective HSP length: 110
effective length of query: 681
effective length of database: 14,082,258
effective search space: 9590017698
effective search space used: 9590017698
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.