Guide to the Human Genome
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Name: AZI2 Sequence: fasta or formatted (232aa) NCBI GI: 197313707
Description:

5-azacytidine induced 2 isoform c

Referenced in:

NF-kappaB Pathway

Other entries for this name:
alt prot [392aa] 5-azacytidine induced 2 isoform a
alt prot [243aa] 5-azacytidine induced 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         11           1
 C cysteine            1.7          4           1
 D aspartate           6.9         16           2
 E glutamate          11.6         27           3
 F phenylalanine       1.3          3           1
 G glycine             2.2          5           1
 H histidine           2.6          6           1
 I isoleucine          4.7         11           1
 K lysine             10.3         24           2
 L leucine            11.6         27           2
 M methionine          1.7          4           1
 N asparagine          5.2         12           1
 P proline             2.2          5           2
 Q glutamine           5.6         13           2
 R arginine            6.0         14           1
 S serine              8.6         20           2
 T threonine           3.0          7           1
 V valine              6.9         16           1
 W tryptophan          0.9          2           1
 Y tyrosine            2.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5-azacytidine induced 2 isoform c 
AZI2                  0.928   5-azacytidine induced 2 isoform b 
AZI2                  0.919   5-azacytidine induced 2 isoform a 
TBKBP1                0.083   TBK1 binding protein 1 
SYCP1                 0.069   synaptonemal complex protein 1 
CCDC88A               0.067   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.067   coiled-coil domain containing 88A isoform 1 
CYTSA                 0.051   cytospin A 
CYTSA                 0.051   cytospin A 
PMFBP1                0.051   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.051   polyamine modulated factor 1 binding protein 1 isof...
MYO5C                 0.049   myosin VC 
CLIP1                 0.046   restin isoform b 
CLIP1                 0.046   restin isoform a 
ERC1                  0.046   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.046   RAB6-interacting protein 2 isoform delta 
ATRIP                 0.044   ATR interacting protein isoform 2 
ATRIP                 0.044   ATR interacting protein isoform 1 
KRT9                  0.042   keratin 9 
CCDC18                0.042   sarcoma antigen NY-SAR-41 
TANK                  0.042   TRAF interacting protein TANK isoform b 
TANK                  0.042   TRAF interacting protein TANK isoform a 
RAI14                 0.042   retinoic acid induced 14 isoform d 
RAI14                 0.042   retinoic acid induced 14 isoform c 
RAI14                 0.042   retinoic acid induced 14 isoform b 
RAI14                 0.042   retinoic acid induced 14 isoform a 
RAI14                 0.042   retinoic acid induced 14 isoform a 
RAI14                 0.042   retinoic acid induced 14 isoform a 
CENPF                 0.042   centromere protein F 
LOC440243             0.039   PREDICTED: Putative golgin subfamily A member 6-lik...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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