ATRIP 9869

Name: ATRIP	Sequence: fasta or formatted (791aa)		NCBI GI: 18390347
Description: ATR interacting protein isoform 1		Referenced in: DNases, Recombination, and DNA Repair
Other entries for this name: alt prot [764aa] ATR interacting protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 61 4 C cysteine 2.9 23 1 D aspartate 5.3 42 2 E glutamate 6.6 52 3 F phenylalanine 3.2 25 2 G glycine 6.6 52 2 H histidine 3.2 25 1 I isoleucine 1.8 14 1 K lysine 4.7 37 2 L leucine 13.7 108 5 M methionine 1.9 15 2 N asparagine 2.3 18 1 P proline 7.0 55 3 Q glutamine 5.7 45 2 R arginine 5.2 41 2 S serine 10.2 81 4 T threonine 4.6 36 2 V valine 6.6 52 2 W tryptophan 0.5 4 1 Y tyrosine 0.6 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ATR interacting protein isoform 1 ATRIP 0.954 ATR interacting protein isoform 2 DCTN1 0.014 dynactin 1 isoform 4 DCTN1 0.014 dynactin 1 isoform 3 DCTN1 0.014 dynactin 1 isoform 2 DCTN1 0.014 dynactin 1 isoform 1 MSN 0.014 moesin FILIP1 0.013 filamin A interacting protein 1 ROCK1 0.012 Rho-associated, coiled-coil containing protein kinase... AZI2 0.012 5-azacytidine induced 2 isoform c AZI2 0.012 5-azacytidine induced 2 isoform b AZI2 0.012 5-azacytidine induced 2 isoform a MYO18A 0.012 myosin 18A isoform b MYO18A 0.012 myosin 18A isoform a RIMBP3B 0.012 RIMS binding protein 3B RIMBP3C 0.012 RIMS binding protein 3C WASF2 0.012 WAS protein family, member 2 ERC1 0.012 RAB6-interacting protein 2 isoform epsilon ERC1 0.012 RAB6-interacting protein 2 isoform delta CCDC13 0.012 coiled-coil domain containing 13 ERC2 0.012 cytomatrix protein p110 MAP7D1 0.012 MAP7 domain containing 1 C14orf38 0.011 PREDICTED: hypothetical protein C14orf38 0.011 PREDICTED: hypothetical protein C14orf38 0.011 PREDICTED: hypothetical protein SYNE1 0.011 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.011 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.011 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.011 spectrin repeat containing, nuclear envelope 1 isof... LBXCOR1 0.011 LBXCOR1 homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.